Prupe.7G140900_v2.0.a1

Alpha/beta hydrolase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0009251
Physical Location & Seq
Forward (+)
15637802 .. 15639226
1425 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G140900.1

Sequence Viewer

Length: 786 bp
ATGGAGAATCCGAAACACTTTGTTTTGGTTCATGGAATTTGCAATGGAGCATGGTGCTGGTACAAGCTTGTCACTCTCCTCCGGCACGCCAGTCACCGTGTCACTGCCTTGGACCTTGGTGCTTCTGGGATCAACTCCAAGCAGCTACATGAGATCACTTCCGTTTGGGACTATGTCCAGCCATTGATGGAGTTCATGGCTTCTATTTCCCTCGAGGAGAGGGTCATATTGGTTGGCCATAGTTATGGCGGCCTTCCTATATCTCTGGCCATGGAGAGCTTTCCTCAGAAGGTTTTGGCTGCTGTTTTTGTCACAGCCTATATGCCTCATTACAATTCTTCCCCTGGAGTTCTCATACAAGAATACTTCAAAGGGACTCCAGTTGAATCATTATTGGATTGTGAGCTTAAGTTTGGCCAAAACCAGGAAAATCCACTAACCTCAGTTGTCTTTGGTCCACAATACATGGCAGAAAAATTGTTCCAGCAGTGCAAACCAGAGGATCTGGAATTAGCTAAAATTTTGGTAAGGCCATCCGGGTTGTTCTTGGAAGACTTCATGACCAAAGAGTGCCAGCTAACAGAACCGAAGTTCGGGTCAGTAACTAAGGTTTTTGTAGTGTGCGAAGGAGATGAAGTTGTCAAAGAAGAATTTCAACGGTGGATGATTGAGAATGGTCCGACTGCACAAGTGATACTGATTAGAGAAGCTGGTCATATGGTCATGCTCTCAAAGCCCGAACAACTCTGTGGATGCTTATGTGAAGTGGCTGAGAAAATATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0016787 GO:0016788 GO:0052689 GO:0080032
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_1 Abhydrolase_6

Protein Analysis

262

Amino Acids

29.36

Weight (kDa)

5.3

Isoelectric Point (pI)

40.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 212
AciI CCGC 1 cut(s) 249
AclWI GGATC 2 cut(s) 137, 510
AcoI YGGCCR 3 cut(s) 235, 267, 415
AcsI RAATTY 3 cut(s) 36, 519, 650
AfaI GTAC 1 cut(s) 62
AfiI CCNNNNNNNGG 2 cut(s) 424, 593
AflII CTTAAG 1 cut(s) 407
AgsI TTSAA 3 cut(s) 370, 386, 656
AjnI CCWGG 2 cut(s) 343, 423
AluBI AGCT 7 cut(s) 67, 145, 279, 406, 515, 577, 710
AluI AGCT 7 cut(s) 67, 145, 279, 406, 515, 577, 710
AlwI GGATC 2 cut(s) 137, 510
Ama87I CYCGRG 1 cut(s) 212
AoxI GGCC 5 cut(s) 235, 250, 267, 415, 530
ApeKI GCWGC 2 cut(s) 142, 299
ApoI RAATTY 3 cut(s) 36, 519, 650
ArsI GACNNNNNNTTYG 2 cut(s) 581, 613
Asp700I GAANNNNTTC 1 cut(s) 651
AspS9I GGNCC 3 cut(s) 112, 455, 677
AsuC2I CCSGG 1 cut(s) 538
AsuHPI GGTGA 1 cut(s) 86
AvaI CYCGRG 1 cut(s) 212
AvaII GGWCC 3 cut(s) 112, 455, 677
BalI TGGCCA 3 cut(s) 237, 269, 417
BbsI GAAGAC 1 cut(s) 558
BbvI GCAGC 2 cut(s) 154, 286
BccI CCATC 2 cut(s) 181, 541
BciT130I CCWGG 2 cut(s) 345, 425
BcnI CCSGG 1 cut(s) 538
BfrI CTTAAG 1 cut(s) 407
BisI GCNGC 3 cut(s) 143, 250, 300
BlsI GCNGC 3 cut(s) 144, 251, 301
Bme1390I CCNGG 3 cut(s) 345, 425, 538
Bme18I GGWCC 3 cut(s) 112, 455, 677
BmeT110I CYCGRG 1 cut(s) 212
BmgT120I GGNCC 3 cut(s) 112, 455, 677
BmrFI CCNGG 3 cut(s) 345, 425, 538
BmsI GCATC 1 cut(s) 743
BpiI GAAGAC 1 cut(s) 558
BplI GAGNNNNNCTC 2 cut(s) 268, 300
BpmI CTGGAG 2 cut(s) 363, 366
BpuMI CCSGG 1 cut(s) 538
BsaJI CCNNGG 4 cut(s) 108, 115, 270, 343
BsaXI ACNNNNNCTCC 2 cut(s) 621, 651
Bsc4I CCNNNNNNNGG 2 cut(s) 424, 593
Bse1I ACTGG 2 cut(s) 90, 380
Bse3DI GCAATG 1 cut(s) 49
BseBI CCWGG 2 cut(s) 345, 425
BseDI CCNNGG 4 cut(s) 108, 115, 270, 343
BseGI GGATG 3 cut(s) 533, 669, 758
BseLI CCNNNNNNNGG 2 cut(s) 424, 593
BseMI GCAATG 1 cut(s) 49
BseMII CTCAG 3 cut(s) 299, 456, 762
BseNI ACTGG 2 cut(s) 90, 380
BseRI GAGGAG 2 cut(s) 68, 230
BseXI GCAGC 2 cut(s) 154, 286
BsgI GTGCAG 1 cut(s) 669
BshFI GGCC 5 cut(s) 237, 252, 269, 417, 532
BsiHKCI CYCGRG 1 cut(s) 212
BsiSI CCGG 2 cut(s) 82, 537
BslFI GGGAC 2 cut(s) 182, 388
BslI CCNNNNNNNGG 2 cut(s) 424, 593
BsmFI GGGAC 2 cut(s) 182, 388
BsnI GGCC 5 cut(s) 237, 252, 269, 417, 532
BsoBI CYCGRG 1 cut(s) 212
Bsp143I GATC 3 cut(s) 129, 153, 502
Bsp19I CCATGG 1 cut(s) 270
BspACI CCGC 1 cut(s) 249
BspANI GGCC 5 cut(s) 237, 252, 269, 417, 532
BspCNI CTCAG 3 cut(s) 298, 455, 763
BspHI TCATGA 1 cut(s) 558
BspPI GGATC 2 cut(s) 137, 510
BspTI CTTAAG 1 cut(s) 407
BsrDI GCAATG 1 cut(s) 49
BsrI ACTGG 2 cut(s) 90, 380
BssECI CCNNGG 4 cut(s) 108, 115, 270, 343
BssMI GATC 3 cut(s) 129, 153, 502
BssT1I CCWWGG 3 cut(s) 108, 115, 270
Bst2UI CCWGG 2 cut(s) 345, 425
Bst4CI ACNGT 2 cut(s) 98, 660
BstAFI CTTAAG 1 cut(s) 407
BstC8I GCNNGC 2 cut(s) 87, 575
BstDEI CTNAG 4 cut(s) 285, 442, 606, 771
BstDSI CCRYGG 1 cut(s) 270
BstF5I GGATG 3 cut(s) 533, 669, 758
BstKTI GATC 3 cut(s) 132, 156, 505
BstMBI GATC 3 cut(s) 129, 153, 502
BstMWI GCNNNNNNNGC 1 cut(s) 733
BstNI CCWGG 2 cut(s) 345, 425
BstSCI CCNGG 3 cut(s) 343, 423, 536
BstV1I GCAGC 2 cut(s) 154, 286
BstV2I GAAGAC 1 cut(s) 558
BstX2I RGATCY 1 cut(s) 502
BstXI CCANNNNNNTGG 1 cut(s) 245
BstYI RGATCY 1 cut(s) 502
BsuRI GGCC 5 cut(s) 237, 252, 269, 417, 532
BtgI CCRYGG 1 cut(s) 270
BtsCI GGATG 3 cut(s) 533, 669, 758
BtsI GCAGTG 2 cut(s) 102, 494
BtsIMutI CAGTG 2 cut(s) 102, 494
Cac8I GCNNGC 2 cut(s) 87, 575
CciI TCATGA 1 cut(s) 558
Cfr13I GGNCC 3 cut(s) 112, 455, 677
Csp6I GTAC 1 cut(s) 61
CviAII CATG 8 cut(s) 32, 51, 149, 196, 271, 466, 559, 724
CviQI GTAC 1 cut(s) 61
DdeI CTNAG 4 cut(s) 285, 442, 606, 771
DpnI GATC 3 cut(s) 131, 155, 504
DpnII GATC 3 cut(s) 129, 153, 502
EaeI YGGCCR 3 cut(s) 235, 267, 415
Eco130I CCWWGG 3 cut(s) 108, 115, 270
Eco47I GGWCC 3 cut(s) 112, 455, 677
Eco88I CYCGRG 1 cut(s) 212
EcoRII CCWGG 2 cut(s) 343, 423
EcoT14I CCWWGG 3 cut(s) 108, 115, 270
ErhI CCWWGG 3 cut(s) 108, 115, 270
FaeI CATG 8 cut(s) 35, 54, 152, 199, 274, 469, 562, 727
FaqI GGGAC 2 cut(s) 182, 388
FatI CATG 8 cut(s) 31, 50, 148, 195, 270, 465, 558, 723
FauNDI CATATG 1 cut(s) 717
Fnu4HI GCNGC 3 cut(s) 143, 250, 300
FokI GGATG 3 cut(s) 520, 676, 765
Fsp4HI GCNGC 3 cut(s) 143, 250, 300
GluI GCNGC 3 cut(s) 143, 250, 300
GsuI CTGGAG 2 cut(s) 363, 366
HaeIII GGCC 5 cut(s) 237, 252, 269, 417, 532
HapII CCGG 2 cut(s) 82, 537
Hin1II CATG 8 cut(s) 35, 54, 152, 199, 274, 469, 562, 727
HindIII AAGCTT 1 cut(s) 65
HinfI GANTC 3 cut(s) 7, 376, 386
HpaII CCGG 2 cut(s) 82, 537
HphI GGTGA 1 cut(s) 86
Hpy166II GTNNAC 1 cut(s) 458
Hpy188I TCNGA 3 cut(s) 12, 288, 681
Hpy188III TCNNGA 2 cut(s) 506, 559
Hpy8I GTNNAC 1 cut(s) 458
HpyAV CCTTC 3 cut(s) 263, 283, 620
HpyCH4III ACNGT 2 cut(s) 98, 660
HpyCH4V TGCA 3 cut(s) 42, 492, 686
HpyF10VI GCNNNNNNNGC 1 cut(s) 733
HpyF3I CTNAG 4 cut(s) 285, 442, 606, 771
Hsp92II CATG 8 cut(s) 35, 54, 152, 199, 274, 469, 562, 727
Kzo9I GATC 3 cut(s) 129, 153, 502
LmnI GCTCC 1 cut(s) 47
Lsp1109I GCAGC 2 cut(s) 154, 286
LweI GCATC 1 cut(s) 743
MaeIII GTNAC 5 cut(s) 70, 92, 100, 310, 601
MalI GATC 3 cut(s) 131, 155, 504
MboI GATC 3 cut(s) 129, 153, 502
MboII GAAGA 3 cut(s) 330, 563, 659
MflI RGATCY 1 cut(s) 502
MlsI TGGCCA 3 cut(s) 237, 269, 417
MluCI AATT 6 cut(s) 36, 334, 476, 509, 519, 650
MluNI TGGCCA 3 cut(s) 237, 269, 417
MlyI GAGTC 1 cut(s) 370
MmeI TCCRAC 1 cut(s) 704
MnlI CCTC 8 cut(s) 89, 208, 213, 221, 294, 336, 451, 493
Mox20I TGGCCA 3 cut(s) 237, 269, 417
MroXI GAANNNNTTC 1 cut(s) 651
MscI TGGCCA 3 cut(s) 237, 269, 417
MseI TTAA 1 cut(s) 408
MslI CAYNNNNRTG 1 cut(s) 243
Msp20I TGGCCA 3 cut(s) 237, 269, 417
MspCI CTTAAG 1 cut(s) 407
MspI CCGG 2 cut(s) 82, 537
MspR9I CCNGG 3 cut(s) 345, 425, 538
MvaI CCWGG 2 cut(s) 345, 425
MwoI GCNNNNNNNGC 1 cut(s) 733
NciI CCSGG 1 cut(s) 538
NcoI CCATGG 1 cut(s) 270
NdeI CATATG 1 cut(s) 717
NdeII GATC 3 cut(s) 129, 153, 502
NlaIII CATG 8 cut(s) 35, 54, 152, 199, 274, 469, 562, 727
NmuCI GTSAC 4 cut(s) 70, 92, 100, 310
PaeR7I CTCGAG 1 cut(s) 212
PagI TCATGA 1 cut(s) 558
PdmI GAANNNNTTC 1 cut(s) 651
PfeI GAWTC 2 cut(s) 7, 386
PflFI GACNNNGTC 1 cut(s) 173
PkrI GCNGC 3 cut(s) 144, 251, 301
PleI GAGTC 1 cut(s) 370
PpsI GAGTC 1 cut(s) 370
Psp6I CCWGG 2 cut(s) 343, 423
PspGI CCWGG 2 cut(s) 343, 423
PspPI GGNCC 3 cut(s) 112, 455, 677
PspXI VCTCGAGB 1 cut(s) 212
PsuI RGATCY 1 cut(s) 502
PsyI GACNNNGTC 1 cut(s) 173
RsaI GTAC 1 cut(s) 62
RsaNI GTAC 1 cut(s) 61
RseI CAYNNNNRTG 1 cut(s) 243
SaqAI TTAA 1 cut(s) 408
SatI GCNGC 3 cut(s) 143, 250, 300
Sau3AI GATC 3 cut(s) 129, 153, 502
Sau96I GGNCC 3 cut(s) 112, 455, 677
SchI GAGTC 1 cut(s) 370
ScrFI CCNGG 3 cut(s) 345, 425, 538
SfaNI GCATC 1 cut(s) 743
Sfr274I CTCGAG 1 cut(s) 212
SinI GGWCC 3 cut(s) 112, 455, 677
SlaI CTCGAG 1 cut(s) 212
SmiMI CAYNNNNRTG 1 cut(s) 243
SmlI CTYRAG 2 cut(s) 212, 407
SmoI CTYRAG 2 cut(s) 212, 407
Sse9I AATT 6 cut(s) 36, 334, 476, 509, 519, 650
SsiI CCGC 1 cut(s) 249
SspI AATATT 1 cut(s) 780
StyD4I CCNGG 3 cut(s) 343, 423, 536
StyI CCWWGG 3 cut(s) 108, 115, 270
TaaI ACNGT 2 cut(s) 98, 660
TaqI TCGA 1 cut(s) 213
TasI AATT 6 cut(s) 36, 334, 476, 509, 519, 650
TauI GCSGC 1 cut(s) 252
TfiI GAWTC 2 cut(s) 7, 386
Tru1I TTAA 1 cut(s) 408
Tru9I TTAA 1 cut(s) 408
TscAI CASTG 2 cut(s) 109, 494
TseFI GTSAC 4 cut(s) 70, 92, 100, 310
TseI GCWGC 2 cut(s) 142, 299
Tsp45I GTSAC 4 cut(s) 70, 92, 100, 310
TspDTI ATGAA 4 cut(s) 20, 184, 547, 648
TspGWI ACGGA 1 cut(s) 151
TspRI CASTG 2 cut(s) 109, 494
Tth111I GACNNNGTC 1 cut(s) 173
Vha464I CTTAAG 1 cut(s) 407
VpaK11BI GGWCC 3 cut(s) 112, 455, 677
XapI RAATTY 3 cut(s) 36, 519, 650
XhoI CTCGAG 1 cut(s) 212
XmnI GAANNNNTTC 1 cut(s) 651
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.