ribonuclease III family protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G48121 AT2G48121 AT4G37510 |
| fragaria_vesca | FvH4_1g17270 FvH4_1g17270 |
| malus_domestica | MD15G1293700.v1.1 |
| prunus_persica | Prupe.6G223800_v2.0.a1 |
| pyrus_communis | pycom15g25680 |
| rosa_chinensis | RchiOBHm_Chr2g0107461 |
| rosa_laevigata | RLG00000017580 |
| rosa_multiflora | Rmu_sc0005152.1_g000009 Rmu_sc0025013.1_g000002 Rmu_sc0039159.1_g000001 Rmu_sc0040873.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00136320 |
| rosa_rugosa | Rorug02G0143700 Rorug02G0143800 |
| rosa_samantha | Rh2AG193900 Rh2AG299800 Rh2BG206100 Rh2CG199100 Rh2DG201100 Rh2DG323800 |
| rosa_wichuraiana | Rw2G015360 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1433 |
| AatII | GACGTC | 1 cut(s) | 1375 |
| AccB1I | GGYRCC | 1 cut(s) | 827 |
| AccBSI | CCGCTC | 1 cut(s) | 1267 |
| AccII | CGCG | 1 cut(s) | 1252 |
| AciI | CCGC | 7 cut(s) | 167, 1250, 1252, 1267, 1395, 1500, 1561 |
| AclI | AACGTT | 1 cut(s) | 1315 |
| AclWI | GGATC | 3 cut(s) | 416, 887, 900 |
| AcoI | YGGCCR | 1 cut(s) | 1396 |
| AcsI | RAATTY | 3 cut(s) | 147, 962, 1388 |
| AcuI | CTGAAG | 5 cut(s) | 39, 362, 447, 1035, 1194 |
| AcvI | CACGTG | 1 cut(s) | 551 |
| AcyI | GRCGYC | 1 cut(s) | 1372 |
| AfaI | GTAC | 1 cut(s) | 870 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1542, 1557 |
| AflII | CTTAAG | 1 cut(s) | 277 |
| AgeI | ACCGGT | 1 cut(s) | 796 |
| AgsI | TTSAA | 6 cut(s) | 84, 428, 962, 968, 1230, 1244 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 177 |
| AjnI | CCWGG | 1 cut(s) | 1342 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1500, 1532 |
| Alw21I | GWGCWC | 1 cut(s) | 550 |
| Alw26I | GTCTC | 6 cut(s) | 164, 183, 209, 342, 922, 1471 |
| AlwI | GGATC | 3 cut(s) | 416, 887, 900 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 902 |
| Ama87I | CYCGRG | 2 cut(s) | 577, 935 |
| AoxI | GGCC | 3 cut(s) | 281, 1396, 1522 |
| ApeKI | GCWGC | 1 cut(s) | 725 |
| ApoI | RAATTY | 3 cut(s) | 147, 962, 1388 |
| AseI | ATTAAT | 1 cut(s) | 1379 |
| AsiGI | ACCGGT | 1 cut(s) | 796 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1388 |
| AspA2I | CCTAGG | 1 cut(s) | 1037 |
| AspLEI | GCGC | 1 cut(s) | 155 |
| AspS9I | GGNCC | 2 cut(s) | 242, 662 |
| AsuC2I | CCSGG | 2 cut(s) | 660, 1065 |
| AsuII | TTCGAA | 1 cut(s) | 1587 |
| AsuNHI | GCTAGC | 1 cut(s) | 217 |
| AvaI | CYCGRG | 2 cut(s) | 577, 935 |
| AvaII | GGWCC | 2 cut(s) | 242, 662 |
| AvrII | CCTAGG | 1 cut(s) | 1037 |
| BaeGI | GKGCMC | 1 cut(s) | 576 |
| BamHI | GGATCC | 1 cut(s) | 892 |
| BanI | GGYRCC | 1 cut(s) | 827 |
| BauI | CACGAG | 1 cut(s) | 186 |
| BbrPI | CACGTG | 1 cut(s) | 551 |
| BbsI | GAAGAC | 3 cut(s) | 173, 362, 1412 |
| Bbv12I | GWGCWC | 1 cut(s) | 550 |
| BbvI | GCAGC | 1 cut(s) | 737 |
| BccI | CCATC | 6 cut(s) | 31, 106, 382, 839, 883, 1544 |
| BceAI | ACGGC | 2 cut(s) | 180, 1537 |
| BciT130I | CCWGG | 1 cut(s) | 1344 |
| BciVI | GTATCC | 2 cut(s) | 654, 1127 |
| BcnI | CCSGG | 2 cut(s) | 660, 1065 |
| BcoDI | GTCTC | 6 cut(s) | 164, 183, 209, 342, 922, 1471 |
| BfaI | CTAG | 3 cut(s) | 218, 980, 1038 |
| BfrI | CTTAAG | 1 cut(s) | 277 |
| BfuI | GTATCC | 2 cut(s) | 654, 1127 |
| BisI | GCNGC | 4 cut(s) | 726, 1268, 1396, 1562 |
| BlnI | CCTAGG | 1 cut(s) | 1037 |
| BlsI | GCNGC | 4 cut(s) | 727, 1269, 1397, 1563 |
| Bme1390I | CCNGG | 3 cut(s) | 660, 1065, 1344 |
| Bme18I | GGWCC | 2 cut(s) | 242, 662 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 177 |
| BmeT110I | CYCGRG | 2 cut(s) | 577, 935 |
| BmgT120I | GGNCC | 2 cut(s) | 242, 662 |
| BmiI | GGNNCC | 5 cut(s) | 258, 459, 663, 829, 894 |
| BmrFI | CCNGG | 3 cut(s) | 660, 1065, 1344 |
| BmsI | GCATC | 6 cut(s) | 538, 840, 889, 1009, 1081, 1231 |
| BmtI | GCTAGC | 1 cut(s) | 221 |
| BpiI | GAAGAC | 3 cut(s) | 173, 362, 1412 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 640, 672 |
| Bpu14I | TTCGAA | 1 cut(s) | 1587 |
| BpuEI | CTTGAG | 2 cut(s) | 159, 629 |
| BpuMI | CCSGG | 2 cut(s) | 660, 1065 |
| Bsa29I | ATCGAT | 2 cut(s) | 113, 411 |
| BsaAI | YACGTR | 1 cut(s) | 551 |
| BsaBI | GATNNNNATC | 2 cut(s) | 417, 483 |
| BsaHI | GRCGYC | 1 cut(s) | 1372 |
| BsaJI | CCNNGG | 5 cut(s) | 647, 1037, 1129, 1250, 1343 |
| BsaWI | WCCGGW | 2 cut(s) | 796, 1473 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 665, 695 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1542, 1557 |
| Bse118I | RCCGGY | 2 cut(s) | 796, 1398 |
| Bse3DI | GCAATG | 1 cut(s) | 1311 |
| Bse8I | GATNNNNATC | 2 cut(s) | 417, 483 |
| BseBI | CCWGG | 1 cut(s) | 1344 |
| BseCI | ATCGAT | 2 cut(s) | 113, 411 |
| BseDI | CCNNGG | 5 cut(s) | 647, 1037, 1129, 1250, 1343 |
| BseGI | GGATG | 5 cut(s) | 529, 855, 894, 946, 1222 |
| BseJI | GATNNNNATC | 2 cut(s) | 417, 483 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1542, 1557 |
| BseMI | GCAATG | 1 cut(s) | 1311 |
| BseMII | CTCAG | 3 cut(s) | 104, 300, 1455 |
| BseRI | GAGGAG | 2 cut(s) | 197, 1460 |
| BseSI | GKGCMC | 1 cut(s) | 576 |
| BseX3I | CGGCCG | 1 cut(s) | 1396 |
| BseXI | GCAGC | 1 cut(s) | 737 |
| Bsh1236I | CGCG | 1 cut(s) | 1252 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1399 |
| BshFI | GGCC | 3 cut(s) | 283, 1398, 1524 |
| BshNI | GGYRCC | 1 cut(s) | 827 |
| BshTI | ACCGGT | 1 cut(s) | 796 |
| BshVI | ATCGAT | 2 cut(s) | 113, 411 |
| BsiEI | CGRYCG | 1 cut(s) | 1399 |
| BsiHKAI | GWGCWC | 1 cut(s) | 550 |
| BsiHKCI | CYCGRG | 2 cut(s) | 577, 935 |
| BsiSI | CCGG | 8 cut(s) | 488, 659, 797, 854, 1064, 1399, 1474, 1490 |
| BslFI | GGGAC | 1 cut(s) | 675 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1542, 1557 |
| BsmAI | GTCTC | 6 cut(s) | 164, 183, 209, 342, 922, 1471 |
| BsmBI | CGTCTC | 1 cut(s) | 209 |
| BsmFI | GGGAC | 1 cut(s) | 675 |
| BsmI | GAATGC | 1 cut(s) | 1074 |
| BsnI | GGCC | 3 cut(s) | 283, 1398, 1524 |
| BsoBI | CYCGRG | 2 cut(s) | 577, 935 |
| Bsp119I | TTCGAA | 1 cut(s) | 1587 |
| Bsp1286I | GDGCHC | 2 cut(s) | 550, 576 |
| Bsp143I | GATC | 3 cut(s) | 408, 892, 1456 |
| BspACI | CCGC | 7 cut(s) | 167, 1250, 1252, 1267, 1395, 1500, 1561 |
| BspANI | GGCC | 3 cut(s) | 283, 1398, 1524 |
| BspCNI | CTCAG | 3 cut(s) | 103, 301, 1454 |
| BspDI | ATCGAT | 2 cut(s) | 113, 411 |
| BspFNI | CGCG | 1 cut(s) | 1252 |
| BspHI | TCATGA | 1 cut(s) | 1453 |
| BspLI | GGNNCC | 5 cut(s) | 258, 459, 663, 829, 894 |
| BspOI | GCTAGC | 1 cut(s) | 221 |
| BspPI | GGATC | 3 cut(s) | 416, 887, 900 |
| BspT104I | TTCGAA | 1 cut(s) | 1587 |
| BspT107I | GGYRCC | 1 cut(s) | 827 |
| BspTI | CTTAAG | 1 cut(s) | 277 |
| BsrBI | CCGCTC | 1 cut(s) | 1267 |
| BsrDI | GCAATG | 1 cut(s) | 1311 |
| BsrFI | RCCGGY | 2 cut(s) | 796, 1398 |
| BssAI | RCCGGY | 2 cut(s) | 796, 1398 |
| BssECI | CCNNGG | 5 cut(s) | 647, 1037, 1129, 1250, 1343 |
| BssMI | GATC | 3 cut(s) | 408, 892, 1456 |
| BssNI | GRCGYC | 1 cut(s) | 1372 |
| BssSI | CACGAG | 1 cut(s) | 186 |
| BssT1I | CCWWGG | 1 cut(s) | 1037 |
| Bst2BI | CACGAG | 1 cut(s) | 186 |
| Bst2UI | CCWGG | 1 cut(s) | 1344 |
| Bst6I | CTCTTC | 1 cut(s) | 692 |
| BstACI | GRCGYC | 1 cut(s) | 1372 |
| BstAFI | CTTAAG | 1 cut(s) | 277 |
| BstBAI | YACGTR | 1 cut(s) | 551 |
| BstBI | TTCGAA | 1 cut(s) | 1587 |
| BstC8I | GCNNGC | 4 cut(s) | 219, 615, 730, 734 |
| BstDEI | CTNAG | 6 cut(s) | 90, 309, 359, 1406, 1441, 1481 |
| BstDSI | CCRYGG | 1 cut(s) | 1250 |
| BstF5I | GGATG | 5 cut(s) | 529, 855, 894, 946, 1222 |
| BstFNI | CGCG | 1 cut(s) | 1252 |
| BstHHI | GCGC | 1 cut(s) | 155 |
| BstKTI | GATC | 3 cut(s) | 411, 895, 1459 |
| BstMAI | GTCTC | 6 cut(s) | 164, 183, 209, 342, 922, 1471 |
| BstMBI | GATC | 3 cut(s) | 408, 892, 1456 |
| BstMCI | CGRYCG | 1 cut(s) | 1399 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 223, 580, 985, 1028, 1363, 1499 |
| BstNI | CCWGG | 1 cut(s) | 1344 |
| BstNSI | RCATGY | 1 cut(s) | 563 |
| BstSCI | CCNGG | 3 cut(s) | 658, 1063, 1342 |
| BstSLI | GKGCMC | 1 cut(s) | 576 |
| BstUI | CGCG | 1 cut(s) | 1252 |
| BstV1I | GCAGC | 1 cut(s) | 737 |
| BstV2I | GAAGAC | 3 cut(s) | 173, 362, 1412 |
| BstX2I | RGATCY | 1 cut(s) | 892 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1350 |
| BstYI | RGATCY | 1 cut(s) | 892 |
| BstZI | CGGCCG | 1 cut(s) | 1396 |
| Bsu15I | ATCGAT | 2 cut(s) | 113, 411 |
| BsuI | GTATCC | 2 cut(s) | 654, 1127 |
| BsuRI | GGCC | 3 cut(s) | 283, 1398, 1524 |
| BsuTUI | ATCGAT | 2 cut(s) | 113, 411 |
| BtgI | CCRYGG | 1 cut(s) | 1250 |
| BtsCI | GGATG | 5 cut(s) | 529, 855, 894, 946, 1222 |
| Cac8I | GCNNGC | 4 cut(s) | 219, 615, 730, 734 |
| CaiI | CAGNNNCTG | 1 cut(s) | 902 |
| CciI | TCATGA | 1 cut(s) | 1453 |
| CfoI | GCGC | 1 cut(s) | 155 |
| Cfr10I | RCCGGY | 2 cut(s) | 796, 1398 |
| Cfr13I | GGNCC | 2 cut(s) | 242, 662 |
| Cfr42I | CCGCGG | 1 cut(s) | 1253 |
| ClaI | ATCGAT | 2 cut(s) | 113, 411 |
| CseI | GACGC | 1 cut(s) | 1346 |
| Csp6I | GTAC | 1 cut(s) | 869 |
| CspAI | ACCGGT | 1 cut(s) | 796 |
| CviAII | CATG | 4 cut(s) | 405, 560, 1454, 1567 |
| CviQI | GTAC | 1 cut(s) | 869 |
| DdeI | CTNAG | 6 cut(s) | 90, 309, 359, 1406, 1441, 1481 |
| DpnI | GATC | 3 cut(s) | 410, 894, 1458 |
| DpnII | GATC | 3 cut(s) | 408, 892, 1456 |
| DriI | GACNNNNNGTC | 1 cut(s) | 177 |
| EaeI | YGGCCR | 1 cut(s) | 1396 |
| EagI | CGGCCG | 1 cut(s) | 1396 |
| Eam1104I | CTCTTC | 1 cut(s) | 692 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 177 |
| EarI | CTCTTC | 1 cut(s) | 692 |
| EciI | GGCGGA | 1 cut(s) | 182 |
| EclXI | CGGCCG | 1 cut(s) | 1396 |
| Eco130I | CCWWGG | 1 cut(s) | 1037 |
| Eco47I | GGWCC | 2 cut(s) | 242, 662 |
| Eco52I | CGGCCG | 1 cut(s) | 1396 |
| Eco57I | CTGAAG | 5 cut(s) | 39, 362, 447, 1035, 1194 |
| Eco72I | CACGTG | 1 cut(s) | 551 |
| Eco88I | CYCGRG | 2 cut(s) | 577, 935 |
| EcoO109I | RGGNCCY | 1 cut(s) | 662 |
| EcoRII | CCWGG | 1 cut(s) | 1342 |
| EcoT14I | CCWWGG | 1 cut(s) | 1037 |
| EcoT22I | ATGCAT | 1 cut(s) | 1074 |
| ErhI | CCWWGG | 1 cut(s) | 1037 |
| Esp3I | CGTCTC | 1 cut(s) | 209 |
| FaeI | CATG | 4 cut(s) | 408, 563, 1457, 1570 |
| FaqI | GGGAC | 1 cut(s) | 675 |
| FatI | CATG | 4 cut(s) | 404, 559, 1453, 1566 |
| FauI | CCCGC | 1 cut(s) | 1257 |
| FauNDI | CATATG | 1 cut(s) | 1091 |
| Fnu4HI | GCNGC | 4 cut(s) | 726, 1268, 1396, 1562 |
| FokI | GGATG | 5 cut(s) | 516, 862, 901, 953, 1209 |
| Fsp4HI | GCNGC | 4 cut(s) | 726, 1268, 1396, 1562 |
| FspBI | CTAG | 3 cut(s) | 218, 980, 1038 |
| GlaI | GCGC | 1 cut(s) | 154 |
| GluI | GCNGC | 4 cut(s) | 726, 1268, 1396, 1562 |
| HaeIII | GGCC | 3 cut(s) | 283, 1398, 1524 |
| HapII | CCGG | 8 cut(s) | 488, 659, 797, 854, 1064, 1399, 1474, 1490 |
| HgaI | GACGC | 1 cut(s) | 1346 |
| HhaI | GCGC | 1 cut(s) | 155 |
| Hin1I | GRCGYC | 1 cut(s) | 1372 |
| Hin1II | CATG | 4 cut(s) | 408, 563, 1457, 1570 |
| Hin6I | GCGC | 1 cut(s) | 153 |
| HinP1I | GCGC | 1 cut(s) | 153 |
| HindIII | AAGCTT | 2 cut(s) | 383, 438 |
| HinfI | GANTC | 9 cut(s) | 115, 132, 172, 270, 315, 653, 1158, 1197, 1486 |
| HpaII | CCGG | 8 cut(s) | 488, 659, 797, 854, 1064, 1399, 1474, 1490 |
| Hpy166II | GTNNAC | 3 cut(s) | 329, 869, 1205 |
| Hpy188I | TCNGA | 9 cut(s) | 146, 342, 466, 648, 1049, 1082, 1133, 1444, 1613 |
| Hpy188III | TCNNGA | 7 cut(s) | 129, 425, 455, 709, 896, 1013, 1454 |
| Hpy8I | GTNNAC | 3 cut(s) | 329, 869, 1205 |
| HpyAV | CCTTC | 4 cut(s) | 47, 471, 962, 1236 |
| HpyCH4IV | ACGT | 6 cut(s) | 202, 506, 550, 1315, 1372, 1417 |
| HpyCH4V | TGCA | 6 cut(s) | 637, 736, 1072, 1123, 1222, 1357 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 223, 580, 985, 1028, 1363, 1499 |
| HpyF3I | CTNAG | 6 cut(s) | 90, 309, 359, 1406, 1441, 1481 |
| HpySE526I | ACGT | 6 cut(s) | 202, 506, 550, 1315, 1372, 1417 |
| Hsp92I | GRCGYC | 1 cut(s) | 1372 |
| Hsp92II | CATG | 4 cut(s) | 408, 563, 1457, 1570 |
| HspAI | GCGC | 1 cut(s) | 153 |
| KspI | CCGCGG | 1 cut(s) | 1253 |
| Kzo9I | GATC | 3 cut(s) | 408, 892, 1456 |
| LmnI | GCTCC | 1 cut(s) | 4 |
| Lsp1109I | GCAGC | 1 cut(s) | 737 |
| LweI | GCATC | 6 cut(s) | 538, 840, 889, 1009, 1081, 1231 |
| MaeI | CTAG | 3 cut(s) | 218, 980, 1038 |
| MaeII | ACGT | 6 cut(s) | 202, 506, 550, 1315, 1372, 1417 |
| MaeIII | GTNAC | 1 cut(s) | 160 |
| MalI | GATC | 3 cut(s) | 410, 894, 1458 |
| MbiI | CCGCTC | 1 cut(s) | 1267 |
| MboI | GATC | 3 cut(s) | 408, 892, 1456 |
| MfeI | CAATTG | 1 cut(s) | 332 |
| MflI | RGATCY | 1 cut(s) | 892 |
| MhlI | GDGCHC | 2 cut(s) | 550, 576 |
| MluCI | AATT | 6 cut(s) | 84, 147, 302, 332, 962, 1388 |
| MlyI | GAGTC | 2 cut(s) | 166, 1191 |
| MmeI | TCCRAC | 1 cut(s) | 1531 |
| Mph1103I | ATGCAT | 1 cut(s) | 1074 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1388 |
| MseI | TTAA | 8 cut(s) | 278, 387, 432, 720, 801, 1142, 1322, 1379 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1304 |
| MspA1I | CMGCKG | 2 cut(s) | 1252, 1502 |
| MspCI | CTTAAG | 1 cut(s) | 277 |
| MspI | CCGG | 8 cut(s) | 488, 659, 797, 854, 1064, 1399, 1474, 1490 |
| MspR9I | CCNGG | 3 cut(s) | 660, 1065, 1344 |
| MunI | CAATTG | 1 cut(s) | 332 |
| Mva1269I | GAATGC | 1 cut(s) | 1074 |
| MvaI | CCWGG | 1 cut(s) | 1344 |
| MvnI | CGCG | 1 cut(s) | 1252 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 223, 580, 985, 1028, 1363, 1499 |
| NciI | CCSGG | 2 cut(s) | 660, 1065 |
| NdeI | CATATG | 1 cut(s) | 1091 |
| NdeII | GATC | 3 cut(s) | 408, 892, 1456 |
| NheI | GCTAGC | 1 cut(s) | 217 |
| NlaIII | CATG | 4 cut(s) | 408, 563, 1457, 1570 |
| NlaIV | GGNNCC | 5 cut(s) | 258, 459, 663, 829, 894 |
| NmuCI | GTSAC | 1 cut(s) | 160 |
| NsiI | ATGCAT | 1 cut(s) | 1074 |
| NspI | RCATGY | 1 cut(s) | 563 |
| NspV | TTCGAA | 1 cut(s) | 1587 |
| PaeR7I | CTCGAG | 2 cut(s) | 577, 935 |
| PagI | TCATGA | 1 cut(s) | 1453 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1548 |
| PctI | GAATGC | 1 cut(s) | 1074 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1388 |
| PfeI | GAWTC | 7 cut(s) | 115, 132, 270, 315, 653, 1158, 1486 |
| PfoI | TCCNGGA | 1 cut(s) | 658 |
| PinAI | ACCGGT | 1 cut(s) | 796 |
| PkrI | GCNGC | 4 cut(s) | 727, 1269, 1397, 1563 |
| PleI | GAGTC | 2 cut(s) | 166, 1191 |
| PmaCI | CACGTG | 1 cut(s) | 551 |
| PmlI | CACGTG | 1 cut(s) | 551 |
| PpsI | GAGTC | 2 cut(s) | 166, 1191 |
| Ppu21I | YACGTR | 1 cut(s) | 551 |
| PpuMI | RGGWCCY | 1 cut(s) | 662 |
| PshBI | ATTAAT | 1 cut(s) | 1379 |
| PsiI | TTATAA | 1 cut(s) | 1433 |
| Psp1406I | AACGTT | 1 cut(s) | 1315 |
| Psp5II | RGGWCCY | 1 cut(s) | 662 |
| Psp6I | CCWGG | 1 cut(s) | 1342 |
| PspCI | CACGTG | 1 cut(s) | 551 |
| PspGI | CCWGG | 1 cut(s) | 1342 |
| PspN4I | GGNNCC | 5 cut(s) | 258, 459, 663, 829, 894 |
| PspPI | GGNCC | 2 cut(s) | 242, 662 |
| PspPPI | RGGWCCY | 1 cut(s) | 662 |
| PspXI | VCTCGAGB | 2 cut(s) | 577, 935 |
| PstNI | CAGNNNCTG | 1 cut(s) | 902 |
| PsuI | RGATCY | 1 cut(s) | 892 |
| RsaI | GTAC | 1 cut(s) | 870 |
| RsaNI | GTAC | 1 cut(s) | 869 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1304 |
| SacII | CCGCGG | 1 cut(s) | 1253 |
| SaqAI | TTAA | 8 cut(s) | 278, 387, 432, 720, 801, 1142, 1322, 1379 |
| SatI | GCNGC | 4 cut(s) | 726, 1268, 1396, 1562 |
| Sau3AI | GATC | 3 cut(s) | 408, 892, 1456 |
| Sau96I | GGNCC | 2 cut(s) | 242, 662 |
| SchI | GAGTC | 2 cut(s) | 166, 1191 |
| ScrFI | CCNGG | 3 cut(s) | 660, 1065, 1344 |
| SduI | GDGCHC | 2 cut(s) | 550, 576 |
| SfaNI | GCATC | 6 cut(s) | 538, 840, 889, 1009, 1081, 1231 |
| Sfr274I | CTCGAG | 2 cut(s) | 577, 935 |
| Sfr303I | CCGCGG | 1 cut(s) | 1253 |
| SfuI | TTCGAA | 1 cut(s) | 1587 |
| SgrBI | CCGCGG | 1 cut(s) | 1253 |
| SinI | GGWCC | 2 cut(s) | 242, 662 |
| SlaI | CTCGAG | 2 cut(s) | 577, 935 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1304 |
| SmlI | CTYRAG | 5 cut(s) | 174, 277, 577, 608, 935 |
| SmoI | CTYRAG | 5 cut(s) | 174, 277, 577, 608, 935 |
| Sse9I | AATT | 6 cut(s) | 84, 147, 302, 332, 962, 1388 |
| SsiI | CCGC | 7 cut(s) | 167, 1250, 1252, 1267, 1395, 1500, 1561 |
| SspMI | CTAG | 3 cut(s) | 218, 980, 1038 |
| StyD4I | CCNGG | 3 cut(s) | 658, 1063, 1342 |
| StyI | CCWWGG | 1 cut(s) | 1037 |
| TaiI | ACGT | 6 cut(s) | 205, 509, 553, 1318, 1375, 1420 |
| TaqI | TCGA | 8 cut(s) | 113, 411, 578, 919, 936, 1188, 1581, 1587 |
| TaqII | GACCGA | 1 cut(s) | 259 |
| TasI | AATT | 6 cut(s) | 84, 147, 302, 332, 962, 1388 |
| TatI | WGTACW | 1 cut(s) | 868 |
| TauI | GCSGC | 3 cut(s) | 1270, 1398, 1564 |
| TfiI | GAWTC | 7 cut(s) | 115, 132, 270, 315, 653, 1158, 1486 |
| Tru1I | TTAA | 8 cut(s) | 278, 387, 432, 720, 801, 1142, 1322, 1379 |
| Tru9I | TTAA | 8 cut(s) | 278, 387, 432, 720, 801, 1142, 1322, 1379 |
| TseFI | GTSAC | 1 cut(s) | 160 |
| TseI | GCWGC | 1 cut(s) | 725 |
| Tsp45I | GTSAC | 1 cut(s) | 160 |
| TspDTI | ATGAA | 9 cut(s) | 6, 39, 66, 262, 1163, 1340, 1397, 1442, 1479 |
| TspGWI | ACGGA | 3 cut(s) | 148, 522, 638 |
| Vha464I | CTTAAG | 1 cut(s) | 277 |
| VpaK11BI | GGWCC | 2 cut(s) | 242, 662 |
| VspI | ATTAAT | 1 cut(s) | 1379 |
| XapI | RAATTY | 3 cut(s) | 147, 962, 1388 |
| XceI | RCATGY | 1 cut(s) | 563 |
| XhoI | CTCGAG | 2 cut(s) | 577, 935 |
| XmaJI | CCTAGG | 1 cut(s) | 1037 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1388 |
| XspI | CTAG | 3 cut(s) | 218, 980, 1038 |
| ZraI | GACGTC | 1 cut(s) | 1373 |
| Zsp2I | ATGCAT | 1 cut(s) | 1074 |