Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0007745

Physical Location & Seq

Genomic Coordinates Reverse (-)

9961945 .. 9965984

Gene Structure 4040 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g17270.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1611 bp

ATGGAACTCTCTTCAACCTTCACACACCTCTCAACCCCATCTTCATCTTACTCCTTCTCTTCTTCCTTCTCACCTTTCCCAACCCAAATCCGCATCATAAACCCCAAATCCCACACCCCAAATCCTCCTCTCACCTTCCGAGTCCTCGCCGTCGCCATCGACCCACAAGACCTCCCCAAGAACAGTCCCCAGCGACTCCTCAAGGAGCTCTCAGAACGCAAAAGAGCCACCTCCCCCAAGAAGAAAGTACCCCCGAAACGCTTCATTCTCCGGCCACCGTTAGACGACAACAGACTCGCCCAGCGCTTCCTCAACAGCCCACAACTCTCCCTGAAATCATTCCCTCTTCTCAGTTCTTGCTTACCCTCTTCGAGGCTCAACAATGCCGACAAGGCCTGGATTGATGAGTACTTGCTCGAGGCCAAGCAGGCTCTTGGGTACCCACTCGAGCCGTCGGAGAGGTTAGGGGATGATAATCCAGCTAAGCAGTTTGATACATTGCTGTACATGGCGTTTCAGCATCCCTGTTGTGAGAGGACTAATGCTAGACATGTGCGGGCTGCGCATTCGAGGCTGTGGTTTCTGGGGCAGTATGTGCTGGAGCTGGGTTTGGCGGAGTTTTTCTTGCAGAGGTATCCGAGGGAGAGTCCGGGGCCGATGAGGGAGAGGGTGTTTGCTTTGATTGGAAAGAGGTACTTGCCAAGGTGGATTAAGGCTGCTAGCTTGCAGAACTTGGTGTTTCCTTTTGATGATATGGATAAGTTGCAGAGGAAGGAGAGGGAGCCACCTGTCAAGTGTGTATTCTGGGCATTGTTTGGGGCAATATATTTGTGTTTTGGTATGCCAGAAGTGTATCGTGTTCTTTTTGAAGTATTTGGAATGGACCCAGAAGCTGAGGACTGCCAGCCAAGATTACGGAGACAACTAGAAGATGTTGATTATGTTTCTGTAGAATTTGAAAACAAAAAACTCAGCTGGCAAGATGTTGCAGTTTACAGGCCCCCAGAAGATGCTCTGTTTGCGCATCCAAGGCTCTTTAGGGCTTGTGTTCCACCTGGTATGCATCGGTTTAGAGGAAATATATGGGATTATGAGAGCAGACCACAAGTCATGCGAGCATTGGGATATCCCTTAAAGATGACAGATCGAATTCCAGATATTACTGAGGCAAGGAACATCGAGCTCGGACTTGGGCTACAGCTTGCTTTCATGCATCCATCGAAGCACAAATTTGAGCACCCCCGTTTTTGTTATGAGCGATTAGAATATGTTGGCCAAAAGATCCAGGACCTTGTTATGGCTGAAAGGTTGCTGATGAAACATTTAGATGCTCCTGGAAAGTGGCTGGCCGAGAGACACCGTAGACTTCTTATGAACAAGTTCTGTGGAAGGTATTTGAGGGAGAAGCGCCTCCATCAGTTCATAATCTATTCTGAACAGGTTATGGATGCTTACGAGCACAACCGGAGACTAAGGAATCCTGCCACAACTGCTATTCAGCAAGCCATTCATGGCCTCTCATACACTGTATATGGGAAGCCAGATGTAAGACGCCTCATGTTTGAGGTTTTCGATTTTGAGCAAACACAACCTAAAGCTGTCAATGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0003674 GO:0003676 GO:0003723 GO:0003725 GO:0003727 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004525 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0019222 GO:0022613 GO:0030422 GO:0031047 GO:0031050 GO:0031053 GO:0031054 GO:0032296 GO:0034470 GO:0034641 GO:0034660 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1901698 GO:1901699

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ribonuclease_3

Protein Analysis

537

Amino Acids

62.76

Weight (kDa)

9.43

Isoelectric Point (pI)

53.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ribonucleas_3_3	PF14622	187 - 287	7.3e-07	Ribonuclease-III-like
Ribonuclease_3	PF00636	191 - 278	7.8e-06	Ribonuclease III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007745)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G48121 AT2G48121 AT4G37510
fragaria_vesca	FvH4_1g17270 FvH4_1g17270
malus_domestica	MD15G1293700.v1.1
prunus_persica	Prupe.6G223800_v2.0.a1
pyrus_communis	pycom15g25680
rosa_chinensis	RchiOBHm_Chr2g0107461
rosa_laevigata	RLG00000017580
rosa_multiflora	Rmu_sc0005152.1_g000009 Rmu_sc0025013.1_g000002 Rmu_sc0039159.1_g000001 Rmu_sc0040873.1_g000001
rosa_roxburghii	Rroxscaffold_2G00136320
rosa_rugosa	Rorug02G0143700 Rorug02G0143800
rosa_samantha	Rh2AG193900 Rh2AG299800 Rh2BG206100 Rh2CG199100 Rh2DG201100 Rh2DG323800
rosa_wichuraiana	Rw2G015360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	564, 1023
Acc65I	GGTACC	1 cut(s)	438
AccB1I	GGYRCC	1 cut(s)	438
AccI	GTMKAC	1 cut(s)	1363
AciI	CCGC	3 cut(s)	91, 556, 614
AclWI	GGATC	1 cut(s)	1276
AcoI	YGGCCR	3 cut(s)	272, 1273, 1347
AcsI	RAATTY	3 cut(s)	953, 1149, 1229
AcyI	GRCGYC	1 cut(s)	1552
AfaI	GTAC	5 cut(s)	249, 410, 440, 506, 695
AfeI	AGCGCT	1 cut(s)	305
AfiI	CCNNNNNNNGG	2 cut(s)	372, 1297
AflIII	ACRYGT	1 cut(s)	550
AgsI	TTSAA	3 cut(s)	15, 869, 959
AhdI	GACNNNNNGTC	1 cut(s)	1106
AjnI	CCWGG	4 cut(s)	395, 1054, 1284, 1333
AluBI	AGCT	9 cut(s)	208, 482, 604, 723, 893, 975, 1183, 1201, 1598
AluI	AGCT	9 cut(s)	208, 482, 604, 723, 893, 975, 1183, 1201, 1598
Alw21I	GWGCWC	4 cut(s)	210, 1185, 1239, 1461
Alw26I	GTCTC	3 cut(s)	913, 1348, 1462
AlwI	GGATC	1 cut(s)	1276
AlwNI	CAGNNNCTG	1 cut(s)	893
Ama87I	CYCGRG	2 cut(s)	416, 446
Aor51HI	AGCGCT	1 cut(s)	305
AoxI	GGCC	8 cut(s)	272, 393, 420, 653, 998, 1273, 1347, 1513
ApeKI	GCWGC	2 cut(s)	560, 716
ApoI	RAATTY	3 cut(s)	953, 1149, 1229
Asp700I	GAANNNNTTC	3 cut(s)	260, 338, 1379
Asp718I	GGTACC	1 cut(s)	438
AspLEI	GCGC	4 cut(s)	306, 565, 1024, 1410
AspS9I	GGNCC	4 cut(s)	653, 883, 999, 1288
AsuC2I	CCSGG	1 cut(s)	651
AsuHPI	GGTGA	2 cut(s)	63, 124
AsuNHI	GCTAGC	1 cut(s)	719
AvaI	CYCGRG	2 cut(s)	416, 446
AvaII	GGWCC	2 cut(s)	883, 1288
BalI	TGGCCA	1 cut(s)	1275
BanI	GGYRCC	1 cut(s)	438
BanII	GRGCYC	2 cut(s)	210, 1185
Bbv12I	GWGCWC	4 cut(s)	210, 1185, 1239, 1461
BbvCI	CCTCAGC	1 cut(s)	894
BbvI	GCAGC	2 cut(s)	547, 703
BccI	CCATC	4 cut(s)	46, 164, 1225, 1422
BceAI	ACGGC	2 cut(s)	134, 436
BciT130I	CCWGG	4 cut(s)	397, 1056, 1286, 1335
BciVI	GTATCC	1 cut(s)	645
BcnI	CCSGG	1 cut(s)	651
BcoDI	GTCTC	3 cut(s)	913, 1348, 1462
BfaI	CTAG	3 cut(s)	546, 720, 926
BfmI	CTRYAG	2 cut(s)	948, 1196
BfoI	RGCGCY	2 cut(s)	307, 1411
BfuI	GTATCC	1 cut(s)	645
BglI	GCCNNNNNGGC	2 cut(s)	392, 428
BisI	GCNGC	2 cut(s)	561, 717
BlpI	GCTNAGC	1 cut(s)	483
BlsI	GCNGC	2 cut(s)	562, 718
BmcAI	AGTACT	1 cut(s)	410
Bme1390I	CCNGG	5 cut(s)	397, 651, 1056, 1286, 1335
Bme18I	GGWCC	2 cut(s)	883, 1288
BmeRI	GACNNNNNGTC	1 cut(s)	1106
BmeT110I	CYCGRG	2 cut(s)	416, 446
BmgT120I	GGNCC	4 cut(s)	653, 883, 999, 1288
BmiI	GGNNCC	5 cut(s)	440, 654, 783, 885, 1001
BmrFI	CCNGG	5 cut(s)	397, 651, 1056, 1286, 1335
BmsI	GCATC	8 cut(s)	102, 529, 1000, 1033, 1072, 1222, 1318, 1438
BmtI	GCTAGC	1 cut(s)	723
BpmI	CTGGAG	1 cut(s)	620
Bpu10I	CCTNAGC	1 cut(s)	894
Bpu1102I	GCTNAGC	1 cut(s)	483
BpuEI	CTTGAG	1 cut(s)	185
BpuMI	CCSGG	1 cut(s)	651
BsaBI	GATNNNNATC	1 cut(s)	474
BsaHI	GRCGYC	1 cut(s)	1552
BsaJI	CCNNGG	4 cut(s)	638, 650, 701, 1028
BsaWI	WCCGGW	1 cut(s)	1464
BsaXI	ACNNNNNCTCC	4 cut(s)	156, 186, 656, 686
Bsc4I	CCNNNNNNNGG	2 cut(s)	372, 1297
Bse3DI	GCAATG	1 cut(s)	497
Bse8I	GATNNNNATC	1 cut(s)	474
BseBI	CCWGG	4 cut(s)	397, 1056, 1286, 1335
BseDI	CCNNGG	4 cut(s)	638, 650, 701, 1028
BseGI	GGATG	5 cut(s)	475, 520, 1024, 1213, 1453
BseJI	GATNNNNATC	1 cut(s)	474
BseLI	CCNNNNNNNGG	2 cut(s)	372, 1297
BseMI	GCAATG	1 cut(s)	497
BseMII	CTCAG	5 cut(s)	225, 364, 885, 985, 1155
BseRI	GAGGAG	2 cut(s)	117, 188
BseXI	GCAGC	2 cut(s)	547, 703
BseYI	CCCAGC	3 cut(s)	189, 300, 604
BshFI	GGCC	8 cut(s)	274, 395, 422, 655, 1000, 1275, 1349, 1515
BshNI	GGYRCC	1 cut(s)	438
BsiHKAI	GWGCWC	4 cut(s)	210, 1185, 1239, 1461
BsiHKCI	CYCGRG	2 cut(s)	416, 446
BsiSI	CCGG	3 cut(s)	271, 650, 1465
BslFI	GGGAC	1 cut(s)	171
BslI	CCNNNNNNNGG	2 cut(s)	372, 1297
BsmAI	GTCTC	3 cut(s)	913, 1348, 1462
BsmFI	GGGAC	1 cut(s)	171
BsmI	GAATGC	1 cut(s)	565
BsnI	GGCC	8 cut(s)	274, 395, 422, 655, 1000, 1275, 1349, 1515
BsoBI	CYCGRG	2 cut(s)	416, 446
Bsp1286I	GDGCHC	4 cut(s)	210, 1185, 1239, 1461
Bsp1407I	TGTACA	1 cut(s)	504
Bsp143I	GATC	2 cut(s)	1144, 1281
Bsp1720I	GCTNAGC	1 cut(s)	483
BspACI	CCGC	3 cut(s)	91, 556, 614
BspANI	GGCC	8 cut(s)	274, 395, 422, 655, 1000, 1275, 1349, 1515
BspCNI	CTCAG	5 cut(s)	224, 363, 886, 984, 1156
BspLI	GGNNCC	5 cut(s)	440, 654, 783, 885, 1001
BspOI	GCTAGC	1 cut(s)	723
BspPI	GGATC	1 cut(s)	1276
BspT107I	GGYRCC	1 cut(s)	438
BsrDI	GCAATG	1 cut(s)	497
BsrGI	TGTACA	1 cut(s)	504
BssECI	CCNNGG	4 cut(s)	638, 650, 701, 1028
BssMI	GATC	2 cut(s)	1144, 1281
BssNI	GRCGYC	1 cut(s)	1552
BssT1I	CCWWGG	2 cut(s)	701, 1028
Bst2UI	CCWGG	4 cut(s)	397, 1056, 1286, 1335
Bst4CI	ACNGT	4 cut(s)	185, 279, 1361, 1528
Bst6I	CTCTTC	4 cut(s)	16, 64, 351, 373
BstACI	GRCGYC	1 cut(s)	1552
BstAPI	GCANNNNNTGC	1 cut(s)	595
BstAUI	TGTACA	1 cut(s)	504
BstDEI	CTNAG	7 cut(s)	211, 350, 483, 894, 971, 1164, 1472
BstENI	CCTNNNNNAGG	1 cut(s)	370
BstF5I	GGATG	5 cut(s)	475, 520, 1024, 1213, 1453
BstH2I	RGCGCY	2 cut(s)	307, 1411
BstHHI	GCGC	4 cut(s)	306, 565, 1024, 1410
BstKTI	GATC	2 cut(s)	1147, 1284
BstMAI	GTCTC	3 cut(s)	913, 1348, 1462
BstMBI	GATC	2 cut(s)	1144, 1281
BstMWI	GCNNNNNNNGC	8 cut(s)	392, 428, 562, 571, 595, 1019, 1030, 1490
BstNI	CCWGG	4 cut(s)	397, 1056, 1286, 1335
BstNSI	RCATGY	1 cut(s)	554
BstSCI	CCNGG	5 cut(s)	395, 649, 1054, 1284, 1333
BstSFI	CTRYAG	2 cut(s)	948, 1196
BstV1I	GCAGC	2 cut(s)	547, 703
BstX2I	RGATCY	1 cut(s)	1281
BstYI	RGATCY	1 cut(s)	1281
BsuI	GTATCC	1 cut(s)	645
BsuRI	GGCC	8 cut(s)	274, 395, 422, 655, 1000, 1275, 1349, 1515
BtsCI	GGATG	5 cut(s)	475, 520, 1024, 1213, 1453
BtsIMutI	CAGTG	1 cut(s)	1524
CaiI	CAGNNNCTG	1 cut(s)	893
CfoI	GCGC	4 cut(s)	306, 565, 1024, 1410
Cfr13I	GGNCC	4 cut(s)	653, 883, 999, 1288
CseI	GACGC	1 cut(s)	1560
CsiI	ACCWGGT	1 cut(s)	1054
Csp6I	GTAC	5 cut(s)	248, 409, 439, 505, 694
CspCI	CAANNNNNGTGG	2 cut(s)	1366, 1401
CviAII	CATG	6 cut(s)	508, 551, 1111, 1210, 1511, 1558
CviQI	GTAC	5 cut(s)	248, 409, 439, 505, 694
DdeI	CTNAG	7 cut(s)	211, 350, 483, 894, 971, 1164, 1472
DpnI	GATC	2 cut(s)	1146, 1283
DpnII	GATC	2 cut(s)	1144, 1281
DriI	GACNNNNNGTC	1 cut(s)	1106
EaeI	YGGCCR	3 cut(s)	272, 1273, 1347
Eam1104I	CTCTTC	4 cut(s)	16, 64, 351, 373
Eam1105I	GACNNNNNGTC	1 cut(s)	1106
EarI	CTCTTC	4 cut(s)	16, 64, 351, 373
EciI	GGCGGA	1 cut(s)	629
Ecl136II	GAGCTC	2 cut(s)	208, 1183
Eco130I	CCWWGG	2 cut(s)	701, 1028
Eco147I	AGGCCT	1 cut(s)	395
Eco24I	GRGCYC	2 cut(s)	210, 1185
Eco32I	GATATC	1 cut(s)	1127
Eco47I	GGWCC	2 cut(s)	883, 1288
Eco47III	AGCGCT	1 cut(s)	305
Eco53kI	GAGCTC	2 cut(s)	208, 1183
Eco88I	CYCGRG	2 cut(s)	416, 446
EcoICRI	GAGCTC	2 cut(s)	208, 1183
EcoNI	CCTNNNNNAGG	1 cut(s)	370
EcoO109I	RGGNCCY	2 cut(s)	999, 1288
EcoRI	GAATTC	1 cut(s)	1149
EcoRII	CCWGG	4 cut(s)	395, 1054, 1284, 1333
EcoRV	GATATC	1 cut(s)	1127
EcoT14I	CCWWGG	2 cut(s)	701, 1028
EcoT22I	ATGCAT	2 cut(s)	1065, 1215
EcoT38I	GRGCYC	2 cut(s)	210, 1185
ErhI	CCWWGG	2 cut(s)	701, 1028
FaeI	CATG	6 cut(s)	511, 554, 1114, 1213, 1514, 1561
FalI	AAGNNNNNCTT	2 cut(s)	680, 712
FaqI	GGGAC	1 cut(s)	171
FatI	CATG	6 cut(s)	507, 550, 1110, 1209, 1510, 1557
FauI	CCCGC	1 cut(s)	549
FblI	GTMKAC	1 cut(s)	1363
Fnu4HI	GCNGC	2 cut(s)	561, 717
FokI	GGATG	5 cut(s)	482, 507, 1011, 1200, 1460
FriOI	GRGCYC	2 cut(s)	210, 1185
Fsp4HI	GCNGC	2 cut(s)	561, 717
FspBI	CTAG	3 cut(s)	546, 720, 926
FspI	TGCGCA	2 cut(s)	564, 1023
GlaI	GCGC	4 cut(s)	305, 564, 1023, 1409
GluI	GCNGC	2 cut(s)	561, 717
GsaI	CCCAGC	3 cut(s)	193, 304, 608
GsuI	CTGGAG	1 cut(s)	620
HaeII	RGCGCY	2 cut(s)	307, 1411
HaeIII	GGCC	8 cut(s)	274, 395, 422, 655, 1000, 1275, 1349, 1515
HapII	CCGG	3 cut(s)	271, 650, 1465
HgaI	GACGC	1 cut(s)	1560
HhaI	GCGC	4 cut(s)	306, 565, 1024, 1410
Hin1I	GRCGYC	1 cut(s)	1552
Hin1II	CATG	6 cut(s)	511, 554, 1114, 1213, 1514, 1561
Hin6I	GCGC	4 cut(s)	304, 563, 1022, 1408
HinP1I	GCGC	4 cut(s)	304, 563, 1022, 1408
HinfI	GANTC	5 cut(s)	141, 195, 294, 646, 1477
HpaII	CCGG	3 cut(s)	271, 650, 1465
HphI	GGTGA	2 cut(s)	63, 124
Hpy166II	GTNNAC	2 cut(s)	994, 1364
Hpy188I	TCNGA	6 cut(s)	140, 214, 457, 639, 1187, 1435
Hpy188III	TCNNGA	1 cut(s)	1154
Hpy8I	GTNNAC	2 cut(s)	994, 1364
Hpy99I	CGWCG	2 cut(s)	155, 457
HpyAV	CCTTC	6 cut(s)	28, 64, 76, 145, 766, 1383
HpyCH4III	ACNGT	4 cut(s)	185, 279, 1361, 1528
HpyCH4V	TGCA	6 cut(s)	628, 727, 766, 989, 1063, 1213
HpyF10VI	GCNNNNNNNGC	8 cut(s)	392, 428, 562, 571, 595, 1019, 1030, 1490
HpyF3I	CTNAG	7 cut(s)	211, 350, 483, 894, 971, 1164, 1472
Hsp92I	GRCGYC	1 cut(s)	1552
Hsp92II	CATG	6 cut(s)	511, 554, 1114, 1213, 1514, 1561
HspAI	GCGC	4 cut(s)	304, 563, 1022, 1408
KpnI	GGTACC	1 cut(s)	442
Kzo9I	GATC	2 cut(s)	1144, 1281
LmnI	GCTCC	4 cut(s)	205, 601, 781, 1336
Lsp1109I	GCAGC	2 cut(s)	547, 703
LweI	GCATC	8 cut(s)	102, 529, 1000, 1033, 1072, 1222, 1318, 1438
MabI	ACCWGGT	1 cut(s)	1054
MaeI	CTAG	3 cut(s)	546, 720, 926
MalI	GATC	2 cut(s)	1146, 1283
MboI	GATC	2 cut(s)	1144, 1281
MboII	GAAGA	9 cut(s)	3, 33, 51, 54, 253, 338, 360, 941, 1019
MflI	RGATCY	1 cut(s)	1281
MhlI	GDGCHC	4 cut(s)	210, 1185, 1239, 1461
MlsI	TGGCCA	1 cut(s)	1275
MluCI	AATT	3 cut(s)	953, 1149, 1229
MluNI	TGGCCA	1 cut(s)	1275
MlyI	GAGTC	4 cut(s)	150, 189, 288, 655
MmeI	TCCRAC	1 cut(s)	435
Mox20I	TGGCCA	1 cut(s)	1275
Mph1103I	ATGCAT	2 cut(s)	1065, 1215
MroXI	GAANNNNTTC	3 cut(s)	260, 338, 1379
MscI	TGGCCA	1 cut(s)	1275
MseI	TTAA	2 cut(s)	711, 1133
MslI	CAYNNNNRTG	1 cut(s)	1326
Msp20I	TGGCCA	1 cut(s)	1275
MspA1I	CMGCKG	1 cut(s)	975
MspI	CCGG	3 cut(s)	271, 650, 1465
MspR9I	CCNGG	5 cut(s)	397, 651, 1056, 1286, 1335
Mva1269I	GAATGC	1 cut(s)	565
MvaI	CCWGG	4 cut(s)	397, 1056, 1286, 1335
MwoI	GCNNNNNNNGC	8 cut(s)	392, 428, 562, 571, 595, 1019, 1030, 1490
NciI	CCSGG	1 cut(s)	651
NdeII	GATC	2 cut(s)	1144, 1281
NheI	GCTAGC	1 cut(s)	719
NlaIII	CATG	6 cut(s)	511, 554, 1114, 1213, 1514, 1561
NlaIV	GGNNCC	5 cut(s)	440, 654, 783, 885, 1001
NmeAIII	GCCGAG	1 cut(s)	1375
NsbI	TGCGCA	2 cut(s)	564, 1023
NsiI	ATGCAT	2 cut(s)	1065, 1215
NspI	RCATGY	1 cut(s)	554
PaeR7I	CTCGAG	2 cut(s)	416, 446
PceI	AGGCCT	1 cut(s)	395
PciI	ACATGT	1 cut(s)	550
PctI	GAATGC	1 cut(s)	565
PdmI	GAANNNNTTC	3 cut(s)	260, 338, 1379
PfeI	GAWTC	1 cut(s)	1477
PfoI	TCCNGGA	2 cut(s)	1284, 1333
PkrI	GCNGC	2 cut(s)	562, 718
PleI	GAGTC	4 cut(s)	149, 189, 288, 654
PpsI	GAGTC	4 cut(s)	149, 189, 288, 654
PpuMI	RGGWCCY	1 cut(s)	1288
PscI	ACATGT	1 cut(s)	550
Psp124BI	GAGCTC	2 cut(s)	210, 1185
Psp5II	RGGWCCY	1 cut(s)	1288
Psp6I	CCWGG	4 cut(s)	395, 1054, 1284, 1333
PspFI	CCCAGC	3 cut(s)	189, 300, 604
PspGI	CCWGG	4 cut(s)	395, 1054, 1284, 1333
PspN4I	GGNNCC	5 cut(s)	440, 654, 783, 885, 1001
PspPI	GGNCC	4 cut(s)	653, 883, 999, 1288
PspPPI	RGGWCCY	1 cut(s)	1288
PspXI	VCTCGAGB	2 cut(s)	416, 446
PstNI	CAGNNNCTG	1 cut(s)	893
PsuI	RGATCY	1 cut(s)	1281
PvuII	CAGCTG	1 cut(s)	975
RsaI	GTAC	5 cut(s)	249, 410, 440, 506, 695
RsaNI	GTAC	5 cut(s)	248, 409, 439, 505, 694
RseI	CAYNNNNRTG	1 cut(s)	1326
SacI	GAGCTC	2 cut(s)	210, 1185
SaqAI	TTAA	2 cut(s)	711, 1133
SatI	GCNGC	2 cut(s)	561, 717
Sau3AI	GATC	2 cut(s)	1144, 1281
Sau96I	GGNCC	4 cut(s)	653, 883, 999, 1288
ScaI	AGTACT	1 cut(s)	410
SchI	GAGTC	4 cut(s)	150, 189, 288, 655
ScrFI	CCNGG	5 cut(s)	397, 651, 1056, 1286, 1335
SduI	GDGCHC	4 cut(s)	210, 1185, 1239, 1461
SexAI	ACCWGGT	1 cut(s)	1054
SfaNI	GCATC	8 cut(s)	102, 529, 1000, 1033, 1072, 1222, 1318, 1438
SfcI	CTRYAG	2 cut(s)	948, 1196
Sfr274I	CTCGAG	2 cut(s)	416, 446
SinI	GGWCC	2 cut(s)	883, 1288
SlaI	CTCGAG	2 cut(s)	416, 446
SmiMI	CAYNNNNRTG	1 cut(s)	1326
SmlI	CTYRAG	3 cut(s)	200, 416, 446
SmoI	CTYRAG	3 cut(s)	200, 416, 446
Sse9I	AATT	3 cut(s)	953, 1149, 1229
SseBI	AGGCCT	1 cut(s)	395
SsiI	CCGC	3 cut(s)	91, 556, 614
SspMI	CTAG	3 cut(s)	546, 720, 926
SstI	GAGCTC	2 cut(s)	210, 1185
StuI	AGGCCT	1 cut(s)	395
StyD4I	CCNGG	5 cut(s)	395, 649, 1054, 1284, 1333
StyI	CCWWGG	2 cut(s)	701, 1028
TaaI	ACNGT	4 cut(s)	185, 279, 1361, 1528
TaqI	TCGA	9 cut(s)	159, 371, 417, 447, 569, 1147, 1179, 1220, 1572
TasI	AATT	3 cut(s)	953, 1149, 1229
TatI	WGTACW	2 cut(s)	408, 504
TfiI	GAWTC	1 cut(s)	1477
Tru1I	TTAA	2 cut(s)	711, 1133
Tru9I	TTAA	2 cut(s)	711, 1133
TscAI	CASTG	1 cut(s)	1531
TseI	GCWGC	2 cut(s)	560, 716
TspDTI	ATGAA	7 cut(s)	33, 253, 1198, 1331, 1388, 1411, 1499
TspGWI	ACGGA	1 cut(s)	931
TspRI	CASTG	1 cut(s)	1531
VpaK11BI	GGWCC	2 cut(s)	883, 1288
XagI	CCTNNNNNAGG	1 cut(s)	370
XapI	RAATTY	3 cut(s)	953, 1149, 1229
XceI	RCATGY	1 cut(s)	554
XhoI	CTCGAG	2 cut(s)	416, 446
XmiI	GTMKAC	1 cut(s)	1363
XmnI	GAANNNNTTC	3 cut(s)	260, 338, 1379
XspI	CTAG	3 cut(s)	546, 720, 926
ZrmI	AGTACT	1 cut(s)	410
Zsp2I	ATGCAT	2 cut(s)	1065, 1215

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.