Ribonuclease III family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G48121 AT2G48121 AT4G37510 |
| fragaria_vesca | FvH4_1g17270 FvH4_1g17270 |
| malus_domestica | MD15G1293700.v1.1 |
| prunus_persica | Prupe.6G223800_v2.0.a1 |
| pyrus_communis | pycom15g25680 |
| rosa_chinensis | RchiOBHm_Chr2g0107461 |
| rosa_laevigata | RLG00000017580 |
| rosa_multiflora | Rmu_sc0005152.1_g000009 Rmu_sc0025013.1_g000002 Rmu_sc0039159.1_g000001 Rmu_sc0040873.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00136320 |
| rosa_rugosa | Rorug02G0143700 Rorug02G0143800 |
| rosa_samantha | Rh2AG193900 Rh2AG299800 Rh2BG206100 Rh2CG199100 Rh2DG201100 Rh2DG323800 |
| rosa_wichuraiana | Rw2G015360 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 570 |
| Acc65I | GGTACC | 2 cut(s) | 253, 444 |
| AccB1I | GGYRCC | 3 cut(s) | 253, 444, 1557 |
| AccBSI | CCGCTC | 1 cut(s) | 1264 |
| AccI | GTMKAC | 1 cut(s) | 162 |
| AccII | CGCG | 4 cut(s) | 133, 379, 553, 1120 |
| AciI | CCGC | 9 cut(s) | 167, 379, 553, 562, 791, 1120, 1264, 1355, 1392 |
| AclWI | GGATC | 1 cut(s) | 1282 |
| AcoI | YGGCCR | 1 cut(s) | 1279 |
| AcsI | RAATTY | 6 cut(s) | 93, 136, 959, 1155, 1235, 1385 |
| AcuI | CTGAAG | 1 cut(s) | 1027 |
| AcyI | GRCGYC | 1 cut(s) | 1558 |
| AdeI | CACNNNGTG | 1 cut(s) | 1614 |
| AfaI | GTAC | 4 cut(s) | 255, 416, 446, 512 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 378, 552, 1303, 1450, 1539 |
| AgsI | TTSAA | 8 cut(s) | 608, 875, 935, 959, 965, 1187, 1505, 1571 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1112 |
| AjnI | CCWGG | 7 cut(s) | 655, 707, 738, 1060, 1290, 1339, 1443 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 104, 136, 1179, 1211 |
| Alw21I | GWGCWC | 2 cut(s) | 216, 1467 |
| Alw26I | GTCTC | 5 cut(s) | 34, 292, 919, 1354, 1421 |
| AlwI | GGATC | 1 cut(s) | 1282 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 739, 899 |
| AoxI | GGCC | 4 cut(s) | 278, 426, 1279, 1519 |
| ApeKI | GCWGC | 2 cut(s) | 722, 1172 |
| ApoI | RAATTY | 6 cut(s) | 93, 136, 959, 1155, 1235, 1385 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 266, 1385 |
| Asp718I | GGTACC | 2 cut(s) | 253, 444 |
| AspLEI | GCGC | 3 cut(s) | 553, 571, 1560 |
| AspS9I | GGNCC | 6 cut(s) | 4, 543, 659, 781, 889, 1294 |
| AsuNHI | GCTAGC | 1 cut(s) | 725 |
| AvaII | GGWCC | 6 cut(s) | 4, 543, 659, 781, 889, 1294 |
| BalI | TGGCCA | 1 cut(s) | 1281 |
| BanI | GGYRCC | 3 cut(s) | 253, 444, 1557 |
| BanII | GRGCYC | 1 cut(s) | 216 |
| BauI | CACGAG | 1 cut(s) | 532 |
| Bbv12I | GWGCWC | 2 cut(s) | 216, 1467 |
| BbvCI | CCTCAGC | 1 cut(s) | 900 |
| BbvI | GCAGC | 2 cut(s) | 734, 1184 |
| BccI | CCATC | 3 cut(s) | 1231, 1297, 1428 |
| BceAI | ACGGC | 2 cut(s) | 143, 1353 |
| BciT130I | CCWGG | 7 cut(s) | 657, 709, 740, 1062, 1292, 1341, 1445 |
| BciVI | GTATCC | 2 cut(s) | 651, 992 |
| BcoDI | GTCTC | 5 cut(s) | 34, 292, 919, 1354, 1421 |
| BfaI | CTAG | 2 cut(s) | 302, 726 |
| BfmI | CTRYAG | 3 cut(s) | 632, 1170, 1202 |
| BfoI | RGCGCY | 1 cut(s) | 1561 |
| BfuI | GTATCC | 2 cut(s) | 651, 992 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 398 |
| BisI | GCNGC | 5 cut(s) | 380, 554, 723, 791, 1173 |
| BlsI | GCNGC | 5 cut(s) | 381, 555, 724, 792, 1174 |
| Bme1390I | CCNGG | 7 cut(s) | 657, 709, 740, 1062, 1292, 1341, 1445 |
| Bme18I | GGWCC | 6 cut(s) | 4, 543, 659, 781, 889, 1294 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1112 |
| BmgT120I | GGNCC | 6 cut(s) | 4, 543, 659, 781, 889, 1294 |
| BmiI | GGNNCC | 6 cut(s) | 203, 255, 446, 654, 891, 1559 |
| BmrFI | CCNGG | 7 cut(s) | 657, 709, 740, 1062, 1292, 1341, 1445 |
| BmsI | GCATC | 8 cut(s) | 535, 837, 1006, 1078, 1228, 1252, 1324, 1444 |
| BmtI | GCTAGC | 1 cut(s) | 729 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 637, 669, 1093, 1125 |
| Bpu10I | CCTNAGC | 2 cut(s) | 900, 1138 |
| BpuEI | CTTGAG | 3 cut(s) | 443, 473, 1095 |
| BsaHI | GRCGYC | 1 cut(s) | 1558 |
| BsaJI | CCNNGG | 4 cut(s) | 439, 644, 707, 1034 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 378, 552, 1303, 1450, 1539 |
| Bse3DI | GCAATG | 1 cut(s) | 1149 |
| BseBI | CCWGG | 7 cut(s) | 657, 709, 740, 1062, 1292, 1341, 1445 |
| BseDI | CCNNGG | 4 cut(s) | 439, 644, 707, 1034 |
| BseGI | GGATG | 8 cut(s) | 65, 295, 526, 852, 1030, 1219, 1243, 1459 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 378, 552, 1303, 1450, 1539 |
| BseMI | GCAATG | 1 cut(s) | 1149 |
| BseMII | CTCAG | 6 cut(s) | 231, 289, 370, 612, 891, 991 |
| BseRI | GAGGAG | 2 cut(s) | 194, 364 |
| BseXI | GCAGC | 2 cut(s) | 734, 1184 |
| BseYI | CCCAGC | 1 cut(s) | 484 |
| Bsh1236I | CGCG | 4 cut(s) | 133, 379, 553, 1120 |
| BshFI | GGCC | 4 cut(s) | 280, 428, 1281, 1521 |
| BshNI | GGYRCC | 3 cut(s) | 253, 444, 1557 |
| BsiHKAI | GWGCWC | 2 cut(s) | 216, 1467 |
| BslFI | GGGAC | 1 cut(s) | 488 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 378, 552, 1303, 1450, 1539 |
| BsmAI | GTCTC | 5 cut(s) | 34, 292, 919, 1354, 1421 |
| BsmBI | CGTCTC | 1 cut(s) | 1421 |
| BsmFI | GGGAC | 1 cut(s) | 488 |
| BsmI | GAATGC | 1 cut(s) | 571 |
| BsnI | GGCC | 4 cut(s) | 280, 428, 1281, 1521 |
| Bsp1286I | GDGCHC | 2 cut(s) | 216, 1467 |
| Bsp1407I | TGTACA | 1 cut(s) | 510 |
| Bsp143I | GATC | 1 cut(s) | 1287 |
| Bsp68I | TCGCGA | 1 cut(s) | 133 |
| BspACI | CCGC | 9 cut(s) | 167, 379, 553, 562, 791, 1120, 1264, 1355, 1392 |
| BspANI | GGCC | 4 cut(s) | 280, 428, 1281, 1521 |
| BspCNI | CTCAG | 6 cut(s) | 230, 288, 369, 613, 892, 990 |
| BspFNI | CGCG | 4 cut(s) | 133, 379, 553, 1120 |
| BspLI | GGNNCC | 6 cut(s) | 203, 255, 446, 654, 891, 1559 |
| BspMAI | CTGCAG | 2 cut(s) | 636, 1174 |
| BspOI | GCTAGC | 1 cut(s) | 729 |
| BspPI | GGATC | 1 cut(s) | 1282 |
| BspQI | GCTCTTC | 1 cut(s) | 1046 |
| BspT107I | GGYRCC | 3 cut(s) | 253, 444, 1557 |
| BsrBI | CCGCTC | 1 cut(s) | 1264 |
| BsrDI | GCAATG | 1 cut(s) | 1149 |
| BsrGI | TGTACA | 1 cut(s) | 510 |
| BssECI | CCNNGG | 4 cut(s) | 439, 644, 707, 1034 |
| BssMI | GATC | 1 cut(s) | 1287 |
| BssNI | GRCGYC | 1 cut(s) | 1558 |
| BssSI | CACGAG | 1 cut(s) | 532 |
| BssT1I | CCWWGG | 2 cut(s) | 439, 1034 |
| Bst2BI | CACGAG | 1 cut(s) | 532 |
| Bst2UI | CCWGG | 7 cut(s) | 657, 709, 740, 1062, 1292, 1341, 1445 |
| Bst4CI | ACNGT | 2 cut(s) | 285, 1612 |
| Bst6I | CTCTTC | 4 cut(s) | 257, 405, 689, 1046 |
| BstACI | GRCGYC | 1 cut(s) | 1558 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 601 |
| BstAUI | TGTACA | 1 cut(s) | 510 |
| BstC8I | GCNNGC | 7 cut(s) | 368, 435, 727, 731, 911, 983, 1122 |
| BstDEI | CTNAG | 7 cut(s) | 217, 275, 356, 621, 900, 977, 1138 |
| BstF5I | GGATG | 8 cut(s) | 65, 295, 526, 852, 1030, 1219, 1243, 1459 |
| BstFNI | CGCG | 4 cut(s) | 133, 379, 553, 1120 |
| BstH2I | RGCGCY | 1 cut(s) | 1561 |
| BstHHI | GCGC | 3 cut(s) | 553, 571, 1560 |
| BstKTI | GATC | 1 cut(s) | 1290 |
| BstMAI | GTCTC | 5 cut(s) | 34, 292, 919, 1354, 1421 |
| BstMBI | GATC | 1 cut(s) | 1287 |
| BstNI | CCWGG | 7 cut(s) | 657, 709, 740, 1062, 1292, 1341, 1445 |
| BstNSI | RCATGY | 2 cut(s) | 421, 560 |
| BstSCI | CCNGG | 7 cut(s) | 655, 707, 738, 1060, 1290, 1339, 1443 |
| BstSFI | CTRYAG | 3 cut(s) | 632, 1170, 1202 |
| BstUI | CGCG | 4 cut(s) | 133, 379, 553, 1120 |
| BstV1I | GCAGC | 2 cut(s) | 734, 1184 |
| BstX2I | RGATCY | 1 cut(s) | 1287 |
| BstYI | RGATCY | 1 cut(s) | 1287 |
| BsuI | GTATCC | 2 cut(s) | 651, 992 |
| BsuRI | GGCC | 4 cut(s) | 280, 428, 1281, 1521 |
| BtgZI | GCGATG | 1 cut(s) | 1349 |
| BtsCI | GGATG | 8 cut(s) | 65, 295, 526, 852, 1030, 1219, 1243, 1459 |
| BtsIMutI | CAGTG | 1 cut(s) | 1608 |
| BtuMI | TCGCGA | 1 cut(s) | 133 |
| Cac8I | GCNNGC | 7 cut(s) | 368, 435, 727, 731, 911, 983, 1122 |
| CaiI | CAGNNNCTG | 2 cut(s) | 739, 899 |
| CfoI | GCGC | 3 cut(s) | 553, 571, 1560 |
| Cfr13I | GGNCC | 6 cut(s) | 4, 543, 659, 781, 889, 1294 |
| CseI | GACGC | 1 cut(s) | 1403 |
| CsiI | ACCWGGT | 3 cut(s) | 738, 1060, 1443 |
| Csp6I | GTAC | 4 cut(s) | 254, 415, 445, 511 |
| CviAII | CATG | 6 cut(s) | 143, 418, 514, 557, 1517, 1564 |
| CviQI | GTAC | 4 cut(s) | 254, 415, 445, 511 |
| DdeI | CTNAG | 7 cut(s) | 217, 275, 356, 621, 900, 977, 1138 |
| DinI | GGCGCC | 1 cut(s) | 1559 |
| DpnI | GATC | 1 cut(s) | 1289 |
| DpnII | GATC | 1 cut(s) | 1287 |
| DraIII | CACNNNGTG | 1 cut(s) | 1614 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1112 |
| EaeI | YGGCCR | 1 cut(s) | 1279 |
| Eam1104I | CTCTTC | 4 cut(s) | 257, 405, 689, 1046 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1112 |
| EarI | CTCTTC | 4 cut(s) | 257, 405, 689, 1046 |
| Ecl136II | GAGCTC | 1 cut(s) | 214 |
| Eco130I | CCWWGG | 2 cut(s) | 439, 1034 |
| Eco24I | GRGCYC | 1 cut(s) | 216 |
| Eco32I | GATATC | 1 cut(s) | 1133 |
| Eco47I | GGWCC | 6 cut(s) | 4, 543, 659, 781, 889, 1294 |
| Eco53kI | GAGCTC | 1 cut(s) | 214 |
| Eco57I | CTGAAG | 1 cut(s) | 1027 |
| EcoICRI | GAGCTC | 1 cut(s) | 214 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1294 |
| EcoRI | GAATTC | 1 cut(s) | 1155 |
| EcoRII | CCWGG | 7 cut(s) | 655, 707, 738, 1060, 1290, 1339, 1443 |
| EcoRV | GATATC | 1 cut(s) | 1133 |
| EcoT14I | CCWWGG | 2 cut(s) | 439, 1034 |
| EcoT22I | ATGCAT | 1 cut(s) | 1071 |
| EcoT38I | GRGCYC | 1 cut(s) | 216 |
| EgeI | GGCGCC | 1 cut(s) | 1559 |
| EheI | GGCGCC | 1 cut(s) | 1559 |
| ErhI | CCWWGG | 2 cut(s) | 439, 1034 |
| Esp3I | CGTCTC | 1 cut(s) | 1421 |
| FaeI | CATG | 6 cut(s) | 146, 421, 517, 560, 1520, 1567 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 686, 718, 1005, 1037 |
| FaqI | GGGAC | 1 cut(s) | 488 |
| FatI | CATG | 6 cut(s) | 142, 417, 513, 556, 1516, 1563 |
| FauI | CCCGC | 3 cut(s) | 174, 1113, 1385 |
| FblI | GTMKAC | 1 cut(s) | 162 |
| Fnu4HI | GCNGC | 5 cut(s) | 380, 554, 723, 791, 1173 |
| FokI | GGATG | 8 cut(s) | 52, 302, 513, 859, 1017, 1206, 1230, 1466 |
| FriOI | GRGCYC | 1 cut(s) | 216 |
| Fsp4HI | GCNGC | 5 cut(s) | 380, 554, 723, 791, 1173 |
| FspBI | CTAG | 2 cut(s) | 302, 726 |
| FspI | TGCGCA | 1 cut(s) | 570 |
| GlaI | GCGC | 3 cut(s) | 552, 570, 1559 |
| GluI | GCNGC | 5 cut(s) | 380, 554, 723, 791, 1173 |
| GsaI | CCCAGC | 1 cut(s) | 488 |
| HaeII | RGCGCY | 1 cut(s) | 1561 |
| HaeIII | GGCC | 4 cut(s) | 280, 428, 1281, 1521 |
| HgaI | GACGC | 1 cut(s) | 1403 |
| HhaI | GCGC | 3 cut(s) | 553, 571, 1560 |
| Hin1I | GRCGYC | 1 cut(s) | 1558 |
| Hin1II | CATG | 6 cut(s) | 146, 421, 517, 560, 1520, 1567 |
| Hin6I | GCGC | 3 cut(s) | 551, 569, 1558 |
| HinP1I | GCGC | 3 cut(s) | 551, 569, 1558 |
| HinfI | GANTC | 1 cut(s) | 1483 |
| Hpy166II | GTNNAC | 2 cut(s) | 163, 227 |
| Hpy188I | TCNGA | 7 cut(s) | 220, 243, 261, 463, 645, 1079, 1441 |
| Hpy188III | TCNNGA | 3 cut(s) | 132, 1160, 1451 |
| Hpy8I | GTNNAC | 2 cut(s) | 163, 227 |
| HpyAV | CCTTC | 5 cut(s) | 28, 244, 468, 772, 959 |
| HpyCH4III | ACNGT | 2 cut(s) | 285, 1612 |
| HpyCH4V | TGCA | 8 cut(s) | 634, 733, 772, 995, 1028, 1069, 1172, 1219 |
| HpyF3I | CTNAG | 7 cut(s) | 217, 275, 356, 621, 900, 977, 1138 |
| Hsp92I | GRCGYC | 1 cut(s) | 1558 |
| Hsp92II | CATG | 6 cut(s) | 146, 421, 517, 560, 1520, 1567 |
| HspAI | GCGC | 3 cut(s) | 551, 569, 1558 |
| KasI | GGCGCC | 1 cut(s) | 1557 |
| KpnI | GGTACC | 2 cut(s) | 257, 448 |
| Kzo9I | GATC | 1 cut(s) | 1287 |
| LguI | GCTCTTC | 1 cut(s) | 1046 |
| LmnI | GCTCC | 4 cut(s) | 207, 658, 824, 1342 |
| Lsp1109I | GCAGC | 2 cut(s) | 734, 1184 |
| LweI | GCATC | 8 cut(s) | 535, 837, 1006, 1078, 1228, 1252, 1324, 1444 |
| MabI | ACCWGGT | 3 cut(s) | 738, 1060, 1443 |
| MaeI | CTAG | 2 cut(s) | 302, 726 |
| MaeIII | GTNAC | 4 cut(s) | 351, 1114, 1256, 1606 |
| MalI | GATC | 1 cut(s) | 1289 |
| MbiI | CCGCTC | 1 cut(s) | 1264 |
| MboI | GATC | 1 cut(s) | 1287 |
| MflI | RGATCY | 1 cut(s) | 1287 |
| MhlI | GDGCHC | 2 cut(s) | 216, 1467 |
| MlsI | TGGCCA | 1 cut(s) | 1281 |
| MluNI | TGGCCA | 1 cut(s) | 1281 |
| Mly113I | GGCGCC | 1 cut(s) | 1558 |
| MmeI | TCCRAC | 2 cut(s) | 267, 1464 |
| Mox20I | TGGCCA | 1 cut(s) | 1281 |
| Mph1103I | ATGCAT | 1 cut(s) | 1071 |
| MroXI | GAANNNNTTC | 2 cut(s) | 266, 1385 |
| MscI | TGGCCA | 1 cut(s) | 1281 |
| MseI | TTAA | 4 cut(s) | 102, 384, 717, 1478 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1332, 1368 |
| Msp20I | TGGCCA | 1 cut(s) | 1281 |
| MspA1I | CMGCKG | 1 cut(s) | 981 |
| MspR9I | CCNGG | 7 cut(s) | 657, 709, 740, 1062, 1292, 1341, 1445 |
| Mva1269I | GAATGC | 1 cut(s) | 571 |
| MvaI | CCWGG | 7 cut(s) | 657, 709, 740, 1062, 1292, 1341, 1445 |
| MvnI | CGCG | 4 cut(s) | 133, 379, 553, 1120 |
| NarI | GGCGCC | 1 cut(s) | 1558 |
| NdeII | GATC | 1 cut(s) | 1287 |
| NheI | GCTAGC | 1 cut(s) | 725 |
| NlaIII | CATG | 6 cut(s) | 146, 421, 517, 560, 1520, 1567 |
| NlaIV | GGNNCC | 6 cut(s) | 203, 255, 446, 654, 891, 1559 |
| NmuCI | GTSAC | 2 cut(s) | 1114, 1606 |
| NruI | TCGCGA | 1 cut(s) | 133 |
| NsbI | TGCGCA | 1 cut(s) | 570 |
| NsiI | ATGCAT | 1 cut(s) | 1071 |
| NspI | RCATGY | 2 cut(s) | 421, 560 |
| PciSI | GCTCTTC | 1 cut(s) | 1046 |
| PctI | GAATGC | 1 cut(s) | 571 |
| PdmI | GAANNNNTTC | 2 cut(s) | 266, 1385 |
| PfeI | GAWTC | 1 cut(s) | 1483 |
| PfoI | TCCNGGA | 2 cut(s) | 1290, 1339 |
| PkrI | GCNGC | 5 cut(s) | 381, 555, 724, 792, 1174 |
| PluTI | GGCGCC | 1 cut(s) | 1561 |
| PpuMI | RGGWCCY | 1 cut(s) | 1294 |
| Psp124BI | GAGCTC | 1 cut(s) | 216 |
| Psp5II | RGGWCCY | 1 cut(s) | 1294 |
| Psp6I | CCWGG | 7 cut(s) | 655, 707, 738, 1060, 1290, 1339, 1443 |
| PspFI | CCCAGC | 1 cut(s) | 484 |
| PspGI | CCWGG | 7 cut(s) | 655, 707, 738, 1060, 1290, 1339, 1443 |
| PspN4I | GGNNCC | 6 cut(s) | 203, 255, 446, 654, 891, 1559 |
| PspPI | GGNCC | 6 cut(s) | 4, 543, 659, 781, 889, 1294 |
| PspPPI | RGGWCCY | 1 cut(s) | 1294 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 849, 881 |
| PstI | CTGCAG | 2 cut(s) | 636, 1174 |
| PstNI | CAGNNNCTG | 2 cut(s) | 739, 899 |
| PsuI | RGATCY | 1 cut(s) | 1287 |
| PvuII | CAGCTG | 1 cut(s) | 981 |
| RruI | TCGCGA | 1 cut(s) | 133 |
| RsaI | GTAC | 4 cut(s) | 255, 416, 446, 512 |
| RsaNI | GTAC | 4 cut(s) | 254, 415, 445, 511 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1332, 1368 |
| SacI | GAGCTC | 1 cut(s) | 216 |
| SapI | GCTCTTC | 1 cut(s) | 1046 |
| SaqAI | TTAA | 4 cut(s) | 102, 384, 717, 1478 |
| SatI | GCNGC | 5 cut(s) | 380, 554, 723, 791, 1173 |
| Sau3AI | GATC | 1 cut(s) | 1287 |
| Sau96I | GGNCC | 6 cut(s) | 4, 543, 659, 781, 889, 1294 |
| ScrFI | CCNGG | 7 cut(s) | 657, 709, 740, 1062, 1292, 1341, 1445 |
| SduI | GDGCHC | 2 cut(s) | 216, 1467 |
| SexAI | ACCWGGT | 3 cut(s) | 738, 1060, 1443 |
| SfaNI | GCATC | 8 cut(s) | 535, 837, 1006, 1078, 1228, 1252, 1324, 1444 |
| SfcI | CTRYAG | 3 cut(s) | 632, 1170, 1202 |
| SfoI | GGCGCC | 1 cut(s) | 1559 |
| SinI | GGWCC | 6 cut(s) | 4, 543, 659, 781, 889, 1294 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1332, 1368 |
| SmlI | CTYRAG | 3 cut(s) | 422, 452, 1110 |
| SmoI | CTYRAG | 3 cut(s) | 422, 452, 1110 |
| SsiI | CCGC | 9 cut(s) | 167, 379, 553, 562, 791, 1120, 1264, 1355, 1392 |
| SspDI | GGCGCC | 1 cut(s) | 1557 |
| SspMI | CTAG | 2 cut(s) | 302, 726 |
| SstI | GAGCTC | 1 cut(s) | 216 |
| StyD4I | CCNGG | 7 cut(s) | 655, 707, 738, 1060, 1290, 1339, 1443 |
| StyI | CCWWGG | 2 cut(s) | 439, 1034 |
| TaaI | ACNGT | 2 cut(s) | 285, 1612 |
| TaqI | TCGA | 5 cut(s) | 97, 575, 1226, 1249, 1578 |
| TaqII | GACCGA | 1 cut(s) | 798 |
| TatI | WGTACW | 2 cut(s) | 414, 510 |
| TauI | GCSGC | 3 cut(s) | 382, 556, 793 |
| TfiI | GAWTC | 1 cut(s) | 1483 |
| Tru1I | TTAA | 4 cut(s) | 102, 384, 717, 1478 |
| Tru9I | TTAA | 4 cut(s) | 102, 384, 717, 1478 |
| TscAI | CASTG | 1 cut(s) | 1615 |
| TseFI | GTSAC | 2 cut(s) | 1114, 1606 |
| TseI | GCWGC | 2 cut(s) | 722, 1172 |
| Tsp45I | GTSAC | 2 cut(s) | 1114, 1606 |
| TspDTI | ATGAA | 5 cut(s) | 10, 259, 1337, 1394, 1505 |
| TspGWI | ACGGA | 3 cut(s) | 339, 937, 943 |
| TspRI | CASTG | 1 cut(s) | 1615 |
| VpaK11BI | GGWCC | 6 cut(s) | 4, 543, 659, 781, 889, 1294 |
| XapI | RAATTY | 6 cut(s) | 93, 136, 959, 1155, 1235, 1385 |
| XceI | RCATGY | 2 cut(s) | 421, 560 |
| XmiI | GTMKAC | 1 cut(s) | 162 |
| XmnI | GAANNNNTTC | 2 cut(s) | 266, 1385 |
| XspI | CTAG | 2 cut(s) | 302, 726 |
| Zsp2I | ATGCAT | 1 cut(s) | 1071 |