Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0007745

Physical Location & Seq

Genomic Coordinates Reverse (-)

17694305 .. 17698362

Gene Structure 4058 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G015360.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1656 bp

ATGCTCATAACCTTCCATACCCAAAACCCACTATCACTCATGGAACTCTCTTCAACCTTCACACAGGTCTCAACCCCATCCTCCTCCTACAACACTTACTCTTTCTCTTCTTCCTTGTCACCTTTCCCAACCCAAATCCGCCTCATAACCCCCAAATCCCACAACCCCAATTCTCGAAACTTCCGAGTTCTCGCCGTCGCAGTCGACCCACAAGAGCTCCCCAAGAACAGTCCCCAGAGGCTCCTCAAGGAGCTCTCAGAGCGCAAAAGAGTCACTTCTCCCAAGAAAAAAGTACCCCCGAAACGTTTCATACTCCGGCCACCGTTAGATGACAACAGACTAGCTCAGAGGTTCCTCAACAGCCCACAACTCTCACTCAAATCCTTTCCTTTGCTCAGTTCTTGCTTACCCTCTTCGCGACTCAACAATGCCGATAAGGCGTGGATAGATGAGTACTTACTTGAGGCTAAGCAAGCTCTTGGGTACCCACTTGAGCCCTCTGAGAGGTTAGGGGATGATAACCCAGCTAAGCAGTTTGATACATTGCTGTACATGGCGTTTCAGCATCCCAGTTGCGAGAGGACTAATGCCCGGCACGTGCGGTCTGCGCATTCGAGGCTGTGGTTTCTGGGGCAGTATGTGCTTGAGTTGGGTTTGGCTGAGTTTTTCTTGCAGAGGTATCCGAGGGAGAGTCCTGGTCCTATGAGGGAGAGGGTGTTTGCGTTGATTGGGAAGAGGTACTTGCCCAGGTGGATTAAGGCTGCTAGCTTGCAGAACTTGGTGTTTCCTTTTGATGATATGGACAAGTTGCAGAGGAAGGAGAGAGAGCCGCCTGTCAAGTGTGTATTCTGGGCATTGTTTGGGGCGATATATTTGTGTTTTGGTATGCCAGAAGTATATCGTGTTCTTTTTGAAGTATTTGGAATGGACCCAGAAGCTGAGGACTGCCAGCCAAGATTACGGAGACAATTAGAAGATGTTGATTATGTTTCAGTAGAATTTGAAGACAAAAAGCTCAGCTGGCAAGATGTTGCAGTTTACAGGCCCCCAGAAGATGCTCTGTTTGCACATCCGAGGCTCTTTAGGGCATGTGTTCCACCAGGTATGCATCGGTTTAGAGGAAATATATGGGATTATGAGAGCAGACCACAAGTCATGCGAGCATTGGGATATCCCTTAAAGATGACAGATAGAATTCCAGACATTACTGAGGCAAGGAACATCGAACTTGGACTTGGGCTACAGCTTGCTTTCTTGCATCCATCGAAGCACAAATTTGAGCACCCTCGTTTCTGTTATGAGCGATTAGAATATGTTGGCCAAAAAATCCAGGACCTTGTGATGGCTGAAAGATTGCTGATGAAACATTTAGATGCTCCTGGAAAGTGGCTGGCAGAGAGACACCGCCGACTTCTTATGAACAAATTCTGTGGAAGGTATTTGAGGGAGAAGCGCCTCCATCAGTTTATCATCTATTCCGAACAGGTTATGGATGCCTACGAGCACAACCGAAGACTAAGGAATCCTGCCACAACTGCTATTCAGCAAGCCATTCATGGCCTCTCATACACTGTATATGGGAAGCCAGATGTAAGACGCCTCATGTTTGAGGTTTTCGATTTTGAGCAAACACAACCTAAAGCTGTTAATGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0003674 GO:0003676 GO:0003723 GO:0003725 GO:0003727 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004525 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0019222 GO:0022613 GO:0030422 GO:0031047 GO:0031050 GO:0031053 GO:0031054 GO:0032296 GO:0034470 GO:0034641 GO:0034660 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1901698 GO:1901699

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ribonuclease_3

Protein Analysis

551

Amino Acids

64.54

Weight (kDa)

9.45

Isoelectric Point (pI)

52.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ribonucleas_3_3	PF14622	181 - 302	1.3e-07	Ribonuclease-III-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007745)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G48121 AT2G48121 AT4G37510
fragaria_vesca	FvH4_1g17270 FvH4_1g17270
malus_domestica	MD15G1293700.v1.1
prunus_persica	Prupe.6G223800_v2.0.a1
pyrus_communis	pycom15g25680
rosa_chinensis	RchiOBHm_Chr2g0107461
rosa_laevigata	RLG00000017580
rosa_multiflora	Rmu_sc0005152.1_g000009 Rmu_sc0025013.1_g000002 Rmu_sc0039159.1_g000001 Rmu_sc0040873.1_g000001
rosa_roxburghii	Rroxscaffold_2G00136320
rosa_rugosa	Rorug02G0143700 Rorug02G0143800
rosa_samantha	Rh2AG193900 Rh2AG299800 Rh2BG206100 Rh2CG199100 Rh2DG201100 Rh2DG323800
rosa_wichuraiana	Rw2G015360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	609
Acc65I	GGTACC	1 cut(s)	483
AccB1I	GGYRCC	1 cut(s)	483
AccI	GTMKAC	1 cut(s)	204
AccII	CGCG	1 cut(s)	418
AciI	CCGC	4 cut(s)	139, 601, 830, 1405
AclI	AACGTT	1 cut(s)	304
AcoI	YGGCCR	2 cut(s)	317, 1318
AcsI	RAATTY	4 cut(s)	998, 1194, 1274, 1424
AcvI	CACGTG	1 cut(s)	598
AcyI	GRCGYC	1 cut(s)	1597
AfaI	GTAC	5 cut(s)	294, 455, 485, 551, 740
AfiI	CCNNNNNNNGG	2 cut(s)	504, 1342
AgsI	TTSAA	3 cut(s)	54, 914, 1004
AhdI	GACNNNNNGTC	1 cut(s)	1151
AjnI	CCWGG	5 cut(s)	694, 746, 1099, 1329, 1378
AjuI	GAANNNNNNNTTGG	2 cut(s)	1218, 1250
Alw21I	GWGCWC	4 cut(s)	219, 255, 1284, 1506
Alw26I	GTCTC	3 cut(s)	73, 958, 1393
AlwNI	CAGNNNCTG	1 cut(s)	938
AoxI	GGCC	4 cut(s)	317, 1043, 1318, 1558
ApeKI	GCWGC	1 cut(s)	761
ApoI	RAATTY	4 cut(s)	998, 1194, 1274, 1424
Asp700I	GAANNNNTTC	2 cut(s)	305, 1424
Asp718I	GGTACC	1 cut(s)	483
AspLEI	GCGC	3 cut(s)	264, 610, 1455
AspS9I	GGNCC	4 cut(s)	698, 928, 1044, 1333
AsuC2I	CCSGG	1 cut(s)	592
AsuHPI	GGTGA	1 cut(s)	111
AsuNHI	GCTAGC	1 cut(s)	764
AvaII	GGWCC	3 cut(s)	698, 928, 1333
BalI	TGGCCA	1 cut(s)	1320
BanI	GGYRCC	1 cut(s)	483
BanII	GRGCYC	3 cut(s)	219, 255, 498
BbrPI	CACGTG	1 cut(s)	598
BbsI	GAAGAC	2 cut(s)	1011, 1519
Bbv12I	GWGCWC	4 cut(s)	219, 255, 1284, 1506
BbvCI	CCTCAGC	1 cut(s)	939
BbvI	GCAGC	1 cut(s)	748
BccI	CCATC	4 cut(s)	85, 1270, 1336, 1467
BceAI	ACGGC	1 cut(s)	179
BciT130I	CCWGG	5 cut(s)	696, 748, 1101, 1331, 1380
BciVI	GTATCC	1 cut(s)	690
BcnI	CCSGG	1 cut(s)	592
BcoDI	GTCTC	3 cut(s)	73, 958, 1393
BfaI	CTAG	2 cut(s)	341, 765
BfmI	CTRYAG	1 cut(s)	1241
BfoI	RGCGCY	1 cut(s)	1456
BfuI	GTATCC	1 cut(s)	690
BglI	GCCNNNNNGGC	1 cut(s)	437
BisI	GCNGC	2 cut(s)	762, 830
BlpI	GCTNAGC	3 cut(s)	468, 528, 1016
BlsI	GCNGC	2 cut(s)	763, 831
BmcAI	AGTACT	1 cut(s)	455
Bme1390I	CCNGG	6 cut(s)	592, 696, 748, 1101, 1331, 1380
Bme18I	GGWCC	3 cut(s)	698, 928, 1333
BmeRI	GACNNNNNGTC	1 cut(s)	1151
BmgT120I	GGNCC	4 cut(s)	698, 928, 1044, 1333
BmiI	GGNNCC	5 cut(s)	242, 353, 485, 930, 1046
BmrFI	CCNGG	6 cut(s)	592, 696, 748, 1101, 1331, 1380
BmrI	ACTGGG	1 cut(s)	564
BmsI	GCATC	6 cut(s)	574, 1045, 1117, 1267, 1363, 1483
BmtI	GCTAGC	1 cut(s)	768
BmuI	ACTGGG	1 cut(s)	564
BpiI	GAAGAC	2 cut(s)	1011, 1519
Bpu10I	CCTNAGC	1 cut(s)	939
Bpu1102I	GCTNAGC	3 cut(s)	468, 528, 1016
BpuEI	CTTGAG	4 cut(s)	230, 482, 512, 665
BpuMI	CCSGG	1 cut(s)	592
BsaAI	YACGTR	1 cut(s)	598
BsaHI	GRCGYC	1 cut(s)	1597
BsaI	GGTCTC	1 cut(s)	73
BsaJI	CCNNGG	3 cut(s)	683, 746, 1073
BsaXI	ACNNNNNCTCC	4 cut(s)	201, 231, 701, 731
Bsc4I	CCNNNNNNNGG	2 cut(s)	504, 1342
Bse1I	ACTGG	1 cut(s)	570
Bse3DI	GCAATG	1 cut(s)	542
BseBI	CCWGG	5 cut(s)	696, 748, 1101, 1331, 1380
BseDI	CCNNGG	3 cut(s)	683, 746, 1073
BseGI	GGATG	6 cut(s)	77, 520, 565, 1069, 1258, 1498
BseLI	CCNNNNNNNGG	2 cut(s)	504, 1342
BseMI	GCAATG	1 cut(s)	542
BseMII	CTCAG	8 cut(s)	270, 359, 409, 492, 651, 930, 1030, 1200
BseNI	ACTGG	1 cut(s)	570
BseRI	GAGGAG	2 cut(s)	73, 233
BseXI	GCAGC	1 cut(s)	748
BseYI	CCCAGC	1 cut(s)	523
Bsh1236I	CGCG	1 cut(s)	418
BshFI	GGCC	4 cut(s)	319, 1045, 1320, 1560
BshNI	GGYRCC	1 cut(s)	483
BsiHKAI	GWGCWC	4 cut(s)	219, 255, 1284, 1506
BsiSI	CCGG	2 cut(s)	316, 592
BslFI	GGGAC	1 cut(s)	216
BslI	CCNNNNNNNGG	2 cut(s)	504, 1342
BsmAI	GTCTC	3 cut(s)	73, 958, 1393
BsmFI	GGGAC	1 cut(s)	216
BsmI	GAATGC	1 cut(s)	610
BsnI	GGCC	4 cut(s)	319, 1045, 1320, 1560
Bso31I	GGTCTC	1 cut(s)	73
Bsp1286I	GDGCHC	5 cut(s)	219, 255, 498, 1284, 1506
Bsp1407I	TGTACA	1 cut(s)	549
Bsp1720I	GCTNAGC	3 cut(s)	468, 528, 1016
Bsp68I	TCGCGA	1 cut(s)	418
BspACI	CCGC	4 cut(s)	139, 601, 830, 1405
BspANI	GGCC	4 cut(s)	319, 1045, 1320, 1560
BspCNI	CTCAG	8 cut(s)	269, 358, 408, 493, 652, 931, 1029, 1201
BspFNI	CGCG	1 cut(s)	418
BspLI	GGNNCC	5 cut(s)	242, 353, 485, 930, 1046
BspOI	GCTAGC	1 cut(s)	768
BspT107I	GGYRCC	1 cut(s)	483
BspTNI	GGTCTC	1 cut(s)	73
BsrDI	GCAATG	1 cut(s)	542
BsrGI	TGTACA	1 cut(s)	549
BsrI	ACTGG	1 cut(s)	570
BssECI	CCNNGG	3 cut(s)	683, 746, 1073
BssNI	GRCGYC	1 cut(s)	1597
Bst2UI	CCWGG	5 cut(s)	696, 748, 1101, 1331, 1380
Bst4CI	ACNGT	3 cut(s)	230, 324, 1573
Bst6I	CTCTTC	4 cut(s)	55, 112, 418, 728
BstACI	GRCGYC	1 cut(s)	1597
BstAPI	GCANNNNNTGC	1 cut(s)	640
BstAUI	TGTACA	1 cut(s)	549
BstBAI	YACGTR	1 cut(s)	598
BstC8I	GCNNGC	9 cut(s)	474, 766, 770, 950, 1022, 1161, 1248, 1392, 1548
BstENI	CCTNNNNNAGG	1 cut(s)	502
BstF5I	GGATG	6 cut(s)	77, 520, 565, 1069, 1258, 1498
BstFNI	CGCG	1 cut(s)	418
BstH2I	RGCGCY	1 cut(s)	1456
BstHHI	GCGC	3 cut(s)	264, 610, 1455
BstMAI	GTCTC	3 cut(s)	73, 958, 1393
BstMWI	GCNNNNNNNGC	9 cut(s)	259, 437, 473, 607, 616, 640, 1021, 1064, 1535
BstNI	CCWGG	5 cut(s)	696, 748, 1101, 1331, 1380
BstNSI	RCATGY	1 cut(s)	1092
BstSCI	CCNGG	6 cut(s)	590, 694, 746, 1099, 1329, 1378
BstSFI	CTRYAG	1 cut(s)	1241
BstUI	CGCG	1 cut(s)	418
BstV1I	GCAGC	1 cut(s)	748
BstV2I	GAAGAC	2 cut(s)	1011, 1519
BsuI	GTATCC	1 cut(s)	690
BsuRI	GGCC	4 cut(s)	319, 1045, 1320, 1560
BtsCI	GGATG	6 cut(s)	77, 520, 565, 1069, 1258, 1498
BtsIMutI	CAGTG	1 cut(s)	1569
BtuMI	TCGCGA	1 cut(s)	418
Cac8I	GCNNGC	9 cut(s)	474, 766, 770, 950, 1022, 1161, 1248, 1392, 1548
CaiI	CAGNNNCTG	1 cut(s)	938
CfoI	GCGC	3 cut(s)	264, 610, 1455
Cfr13I	GGNCC	4 cut(s)	698, 928, 1044, 1333
CseI	GACGC	1 cut(s)	1605
CsiI	ACCWGGT	1 cut(s)	1099
Csp6I	GTAC	5 cut(s)	293, 454, 484, 550, 739
CspCI	CAANNNNNGTGG	2 cut(s)	1411, 1446
CviAII	CATG	6 cut(s)	40, 553, 1089, 1156, 1556, 1603
CviQI	GTAC	5 cut(s)	293, 454, 484, 550, 739
DriI	GACNNNNNGTC	1 cut(s)	1151
EaeI	YGGCCR	2 cut(s)	317, 1318
Eam1104I	CTCTTC	4 cut(s)	55, 112, 418, 728
Eam1105I	GACNNNNNGTC	1 cut(s)	1151
EarI	CTCTTC	4 cut(s)	55, 112, 418, 728
EciI	GGCGGA	1 cut(s)	128
Ecl136II	GAGCTC	2 cut(s)	217, 253
Eco24I	GRGCYC	3 cut(s)	219, 255, 498
Eco31I	GGTCTC	1 cut(s)	73
Eco32I	GATATC	1 cut(s)	1172
Eco47I	GGWCC	3 cut(s)	698, 928, 1333
Eco53kI	GAGCTC	2 cut(s)	217, 253
Eco72I	CACGTG	1 cut(s)	598
EcoICRI	GAGCTC	2 cut(s)	217, 253
EcoNI	CCTNNNNNAGG	1 cut(s)	502
EcoO109I	RGGNCCY	2 cut(s)	1044, 1333
EcoRI	GAATTC	1 cut(s)	1194
EcoRII	CCWGG	5 cut(s)	694, 746, 1099, 1329, 1378
EcoRV	GATATC	1 cut(s)	1172
EcoT22I	ATGCAT	1 cut(s)	1110
EcoT38I	GRGCYC	3 cut(s)	219, 255, 498
FaeI	CATG	6 cut(s)	43, 556, 1092, 1159, 1559, 1606
FalI	AAGNNNNNCTT	4 cut(s)	259, 291, 725, 757
FaqI	GGGAC	1 cut(s)	216
FatI	CATG	6 cut(s)	39, 552, 1088, 1155, 1555, 1602
FblI	GTMKAC	1 cut(s)	204
Fnu4HI	GCNGC	2 cut(s)	762, 830
FokI	GGATG	6 cut(s)	64, 527, 552, 1056, 1245, 1505
FriOI	GRGCYC	3 cut(s)	219, 255, 498
Fsp4HI	GCNGC	2 cut(s)	762, 830
FspBI	CTAG	2 cut(s)	341, 765
FspI	TGCGCA	1 cut(s)	609
GlaI	GCGC	3 cut(s)	263, 609, 1454
GluI	GCNGC	2 cut(s)	762, 830
GsaI	CCCAGC	1 cut(s)	527
HaeII	RGCGCY	1 cut(s)	1456
HaeIII	GGCC	4 cut(s)	319, 1045, 1320, 1560
HapII	CCGG	2 cut(s)	316, 592
HgaI	GACGC	1 cut(s)	1605
HhaI	GCGC	3 cut(s)	264, 610, 1455
Hin1I	GRCGYC	1 cut(s)	1597
Hin1II	CATG	6 cut(s)	43, 556, 1092, 1159, 1559, 1606
Hin6I	GCGC	3 cut(s)	262, 608, 1453
HinP1I	GCGC	3 cut(s)	262, 608, 1453
HincII	GTYRAC	1 cut(s)	205
HindII	GTYRAC	1 cut(s)	205
HinfI	GANTC	4 cut(s)	270, 420, 691, 1522
HpaII	CCGG	2 cut(s)	316, 592
HphI	GGTGA	1 cut(s)	111
Hpy166II	GTNNAC	2 cut(s)	205, 1039
Hpy188I	TCNGA	7 cut(s)	185, 259, 348, 502, 684, 1074, 1480
Hpy188III	TCNNGA	3 cut(s)	174, 417, 1199
Hpy8I	GTNNAC	2 cut(s)	205, 1039
Hpy99I	CGWCG	1 cut(s)	200
HpyAV	CCTTC	4 cut(s)	22, 67, 811, 1428
HpyCH4III	ACNGT	3 cut(s)	230, 324, 1573
HpyCH4IV	ACGT	2 cut(s)	304, 597
HpyCH4V	TGCA	7 cut(s)	673, 772, 811, 1034, 1067, 1108, 1258
HpyF10VI	GCNNNNNNNGC	9 cut(s)	259, 437, 473, 607, 616, 640, 1021, 1064, 1535
HpySE526I	ACGT	2 cut(s)	304, 597
Hsp92I	GRCGYC	1 cut(s)	1597
Hsp92II	CATG	6 cut(s)	43, 556, 1092, 1159, 1559, 1606
HspAI	GCGC	3 cut(s)	262, 608, 1453
KpnI	GGTACC	1 cut(s)	487
LmnI	GCTCC	4 cut(s)	222, 246, 250, 1381
Lsp1109I	GCAGC	1 cut(s)	748
LweI	GCATC	6 cut(s)	574, 1045, 1117, 1267, 1363, 1483
MabI	ACCWGGT	1 cut(s)	1099
MaeI	CTAG	2 cut(s)	341, 765
MaeII	ACGT	2 cut(s)	304, 597
MaeIII	GTNAC	2 cut(s)	117, 271
MboII	GAAGA	9 cut(s)	42, 99, 102, 405, 745, 986, 1016, 1064, 1524
MhlI	GDGCHC	5 cut(s)	219, 255, 498, 1284, 1506
MlsI	TGGCCA	1 cut(s)	1320
MluCI	AATT	6 cut(s)	169, 968, 998, 1194, 1274, 1424
MluNI	TGGCCA	1 cut(s)	1320
MlyI	GAGTC	3 cut(s)	279, 414, 700
Mox20I	TGGCCA	1 cut(s)	1320
Mph1103I	ATGCAT	1 cut(s)	1110
MroXI	GAANNNNTTC	2 cut(s)	305, 1424
MscI	TGGCCA	1 cut(s)	1320
MseI	TTAA	3 cut(s)	756, 1178, 1647
MslI	CAYNNNNRTG	1 cut(s)	1371
Msp20I	TGGCCA	1 cut(s)	1320
MspA1I	CMGCKG	1 cut(s)	1020
MspI	CCGG	2 cut(s)	316, 592
MspR9I	CCNGG	6 cut(s)	592, 696, 748, 1101, 1331, 1380
Mva1269I	GAATGC	1 cut(s)	610
MvaI	CCWGG	5 cut(s)	696, 748, 1101, 1331, 1380
MvnI	CGCG	1 cut(s)	418
MwoI	GCNNNNNNNGC	9 cut(s)	259, 437, 473, 607, 616, 640, 1021, 1064, 1535
NciI	CCSGG	1 cut(s)	592
NheI	GCTAGC	1 cut(s)	764
NlaIII	CATG	6 cut(s)	43, 556, 1092, 1159, 1559, 1606
NlaIV	GGNNCC	5 cut(s)	242, 353, 485, 930, 1046
NmuCI	GTSAC	2 cut(s)	117, 271
NruI	TCGCGA	1 cut(s)	418
NsbI	TGCGCA	1 cut(s)	609
NsiI	ATGCAT	1 cut(s)	1110
NspI	RCATGY	1 cut(s)	1092
PcsI	WCGNNNNNNNCGW	1 cut(s)	181
PctI	GAATGC	1 cut(s)	610
PdmI	GAANNNNTTC	2 cut(s)	305, 1424
PfeI	GAWTC	1 cut(s)	1522
PfoI	TCCNGGA	2 cut(s)	1329, 1378
PkrI	GCNGC	2 cut(s)	763, 831
PleI	GAGTC	3 cut(s)	278, 414, 699
PmaCI	CACGTG	1 cut(s)	598
PmlI	CACGTG	1 cut(s)	598
PpsI	GAGTC	3 cut(s)	278, 414, 699
Ppu21I	YACGTR	1 cut(s)	598
PpuMI	RGGWCCY	1 cut(s)	1333
Psp124BI	GAGCTC	2 cut(s)	219, 255
Psp1406I	AACGTT	1 cut(s)	304
Psp5II	RGGWCCY	1 cut(s)	1333
Psp6I	CCWGG	5 cut(s)	694, 746, 1099, 1329, 1378
PspCI	CACGTG	1 cut(s)	598
PspFI	CCCAGC	1 cut(s)	523
PspGI	CCWGG	5 cut(s)	694, 746, 1099, 1329, 1378
PspN4I	GGNNCC	5 cut(s)	242, 353, 485, 930, 1046
PspPI	GGNCC	4 cut(s)	698, 928, 1044, 1333
PspPPI	RGGWCCY	1 cut(s)	1333
PsrI	GAACNNNNNNTAC	2 cut(s)	888, 920
PstNI	CAGNNNCTG	1 cut(s)	938
PvuII	CAGCTG	1 cut(s)	1020
RruI	TCGCGA	1 cut(s)	418
RsaI	GTAC	5 cut(s)	294, 455, 485, 551, 740
RsaNI	GTAC	5 cut(s)	293, 454, 484, 550, 739
RseI	CAYNNNNRTG	1 cut(s)	1371
SacI	GAGCTC	2 cut(s)	219, 255
SalI	GTCGAC	1 cut(s)	203
SaqAI	TTAA	3 cut(s)	756, 1178, 1647
SatI	GCNGC	2 cut(s)	762, 830
Sau96I	GGNCC	4 cut(s)	698, 928, 1044, 1333
ScaI	AGTACT	1 cut(s)	455
SchI	GAGTC	3 cut(s)	279, 414, 700
ScrFI	CCNGG	6 cut(s)	592, 696, 748, 1101, 1331, 1380
SduI	GDGCHC	5 cut(s)	219, 255, 498, 1284, 1506
SexAI	ACCWGGT	1 cut(s)	1099
SfaNI	GCATC	6 cut(s)	574, 1045, 1117, 1267, 1363, 1483
SfcI	CTRYAG	1 cut(s)	1241
SinI	GGWCC	3 cut(s)	698, 928, 1333
SmiMI	CAYNNNNRTG	1 cut(s)	1371
SmlI	CTYRAG	4 cut(s)	245, 461, 491, 644
SmoI	CTYRAG	4 cut(s)	245, 461, 491, 644
Sse9I	AATT	6 cut(s)	169, 968, 998, 1194, 1274, 1424
SsiI	CCGC	4 cut(s)	139, 601, 830, 1405
SspMI	CTAG	2 cut(s)	341, 765
SstI	GAGCTC	2 cut(s)	219, 255
StyD4I	CCNGG	6 cut(s)	590, 694, 746, 1099, 1329, 1378
TaaI	ACNGT	3 cut(s)	230, 324, 1573
TaiI	ACGT	2 cut(s)	307, 600
TaqI	TCGA	6 cut(s)	175, 204, 614, 1224, 1265, 1617
TasI	AATT	6 cut(s)	169, 968, 998, 1194, 1274, 1424
TatI	WGTACW	2 cut(s)	453, 549
TauI	GCSGC	1 cut(s)	832
TfiI	GAWTC	1 cut(s)	1522
Tru1I	TTAA	3 cut(s)	756, 1178, 1647
Tru9I	TTAA	3 cut(s)	756, 1178, 1647
TscAI	CASTG	1 cut(s)	1576
TseFI	GTSAC	2 cut(s)	117, 271
TseI	GCWGC	1 cut(s)	761
Tsp45I	GTSAC	2 cut(s)	117, 271
TspDTI	ATGAA	4 cut(s)	298, 1376, 1433, 1544
TspGWI	ACGGA	1 cut(s)	976
TspRI	CASTG	1 cut(s)	1576
VpaK11BI	GGWCC	3 cut(s)	698, 928, 1333
XagI	CCTNNNNNAGG	1 cut(s)	502
XapI	RAATTY	4 cut(s)	998, 1194, 1274, 1424
XceI	RCATGY	1 cut(s)	1092
XmiI	GTMKAC	1 cut(s)	204
XmnI	GAANNNNTTC	2 cut(s)	305, 1424
XspI	CTAG	2 cut(s)	341, 765
ZrmI	AGTACT	1 cut(s)	455
Zsp2I	ATGCAT	1 cut(s)	1110

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.