Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007740

Physical Location & Seq

Genomic Coordinates Reverse (-)

2765642 .. 2770282

Gene Structure 4641 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G08550.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2727 bp

ATGGGAAGTAACCGTCCTAAGAATTTCCGGCGGCGAGGGGACGACGGCGGCGATGAAATTGACGGTAAAGTTGCTACCCCCTCGTCAAAACCGACTTCGACTCTTTCCTCCTCGAAACCTAAAACACTCTCAGCCTCGGCCCCGAAGAAGAAACTCCTAAGTTTCGCCGACGACGAGGAGGAGGAAGAAGATGGAGCTCCCCGTGTGACGATAAAGCCTAAGAACGGCAGAGACCGTGTCAAATCCTCTTCCCGTCTCGGCGTTTCGGGATCTTCTCACAGACACTCTTCAACCAAGGAACGTCGTCCCGCTTCTTCTAACGTGCTTCCTCAGGCCGGCTCTTATTCGAAAGAGGCGCTGCTCGAGCTCCAGAAGAACACACGGACGCTTCCTTATTCTCGCTCTAGTGCCAATGCCGAGCCGAAGGTAGTGCTTAAGGGTTTAATCAAACCTCCGCAGGATCATGAGCAGCAGAGTCTGAAGGATGTAGTTAAACAGGTTTCGGATTTGGACTTCGATGAGGAAGGGGAAGAAGAGCAGCATGAAGATGCGTTTGCTGATCAGGCAGCGATTATTAGAGCCAAGAAAGAGAGGATGAGGCAGTCACGTTCAGCACCGGCGCCTGATTACATATCACTAGATGGTGGTATCGTAAATCATTCTGCTGTTGAAGGAGTCAGCGACGAGGATGCGGATTTTCAGGGAATTTTCGTCGGTCCGAGACCTCAGAAAGATGATAAGAAAGGTGTGTTTGATTTCGGTGATGAAAATCCTACTGCTAAAGAAACCACGACAAGTAGTATTTATGAGGATGAGGATGAAGAAGATAAGTTGTGGGAGGAGGAGCAATTTAAGAAGGGTATTGGTAAAAGAATGGACGAAGGGTCGCATAGGACTGTAACTAGTAATGGGATTGGCGTGCCTTTGCATTCTAAACAGCAGACACTGCCACAACAGCAACCGCAGATGTATGCTTATCATGCCGGGACACCAATGCCGAATGTTTCTGTCGCTCCTACCATTGGCCCAGCTACTAGTGTTGATACATTACCAATGTCACAACAAGCCGAGCTTGCCAAGAAGGCATTGAAAGACAATGTTAAGAAGCTTAAGGAATCTCATGCAAAAACGTTATCCTCCCTTACCAAGACAGATGAGAATCTGACTGCGTCGTTGATGAGTATCACAGCTCTTGAAAGTTCGCTATCTGCAGCTGGAGATAAGTATGTGTTCATGCAAAAACTCAGAGACTTCATTTCTGTTATCTGTGACTTCATGCAGAATAAGGGTTCATTAATTGAAGAAATTGAAGATCAAATGAAGGAACTTAACGAAAAACATGCTTTATCTATTCTAGAAAGGAGAATTGCAGATAACAATGATGAAATGATAGAGTTGGGGGCCGCAGTGAAAGCAGCAATGACAGTTCTAAACAAACATGGAAGCAGTAGTTCAGTGATTGCTGCTGCCACAGGTGCTGCGTTGGCTGCCTCTACTTCTATAAGGCAGCAGATGAATCAACCAGTTAAGCTTGATGAATTTGGCAGAGACGAAAATCTGCAGAAGCGCAGGGAAGTGGAACAGAGGGCTGCAGCCCGGCAGAAAAGGCGAGCTCGATTTGAAAATAAGCGTGCATCAGCTATGGAGGTTGATGGACCTTCTCTGAAAATAGAAGGAGAATCAAGCACTGATGAGAGTGACACTGAGACTTCAGCTTATAAGGAGACAAGAGATAGCTTACTTCAGTGTGCTGATAAGGTCTTTAGTGATGCATCTGAGGAGTACTCCCAGCTTTCAAAGGTGAAGGCGAGATTTGAGAGGTGGAAGCGAGACTATTCATCAACTTATCGTGATGCTTACATGTCTTTGACCGTTCCTTCCATCTTTTCACCTTATGTAAGACTGGAGCTTTTGAAATGGGATCCTCTTCATCAAGATGTGGATTTCTTTGACATGAAATGGCATGGGTTGCTTTTTGATTACGGGAAGCCAGAAGATGGGGATGATTTTGCACCAGATGATACTGATGCCAACCTTGTCCCTGAGCTAGTAGAAAAGGTTGCAATTCCAATTTTGCACCATCAGATAGTTCGTTGCTGGGATATACTTAGCACCCGGGAGACAAGAAATGCTGTTGCTGCTACAAGCTTGGTGACAAATTATGTTTCTGCTTCGAGTGAGGCCTTAGCAGAACTATTTGCTGCTATTCGTGCTCGCCTTGTTGAAGCCATTGCAGCTATTAGTGTTCCGACATGGGATCCTCTGGTATTGAAGGCTGTACCTAATACTCCACAAGTTGCCGCATATAGGTTTGGGACATCAGTCCGTCTTATGAGAAATATATGTATGTGGAAAGACATCCTGGCGCTTCCAGTGTTGGAGAACTTGGCTCTTAGTGACCTTTTGTTTGGAAAAGTTCTACCCCATGTCAGAAGCATTGCATCAAATATCCATGATGCTGTGACAAGAACTGAAAGAATCGTTGCTTCTTTGTCTGGAGTGTGGACAGGACCAAGCGTCACACGAACCCACAGTCGTCCGCTGCAACCTCTTGTGGATTGTACTCTGACACTTAGAAGAATTCTCGAGAAAAGGCTTGGCTCAGGACTGGACGATGCGGAAACCACTGGTCTCGCCCGCAGATTAAAGAGAATACTAGTCGAGCTCCATGAACATGACCACGCCAGGGAAATTGTCAGAACATTCAATCTTAAGGAGGCAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000122 GO:0000375 GO:0000377 GO:0000398 GO:0000976 GO:0000977 GO:0000978 GO:0000981 GO:0000982 GO:0000987 GO:0001012 GO:0001067 GO:0001078 GO:0001227 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006355 GO:0006357 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0008380 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0016070 GO:0016071 GO:0017148 GO:0019219 GO:0019222 GO:0022402 GO:0030371 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032268 GO:0032269 GO:0034248 GO:0034249 GO:0034641 GO:0034645 GO:0042023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044786 GO:0045182 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1902679 GO:1903506 GO:1903507 GO:1990837 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GCFC NTR2

Protein Analysis

908

Amino Acids

100.77

Weight (kDa)

5.94

Isoelectric Point (pI)

48.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GCFC	PF07842	598 - 803	2.5e-38	GC-rich sequence DNA-binding factor-like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0007740)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08550
fragaria_vesca	FvH4_4g28100 FvH4_4g28100 FvH4_4g28100 FvH4_4g28100 FvH4_4g28100
malus_domestica	MD13G1046700.v1.1 MD16G1048400.v1.1
prunus_persica	Prupe.1G305200_v2.0.a1 Prupe.1G305200_v2.0.a1 Prupe.1G305200_v2.0.a1 Prupe.1G305200_v2.0.a1
pyrus_communis	pycom13g04090 pycom16g04230
rosa_chinensis	RchiOBHm_Chr4g0435851
rosa_laevigata	RLG00000006554
rosa_multiflora	Rmu_sc0002642.1_g000001
rosa_roxburghii	Rroxscaffold_5G00377030
rosa_rugosa	Rorug04G0290000
rosa_samantha	Rh4AG344300 Rh4BG353200 Rh4CG367600 Rh4DG347100
rosa_wichuraiana	Rw4G030080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1719
AccB1I	GGYRCC	1 cut(s)	619
AccB7I	CCANNNNNTGG	1 cut(s)	1997
AclI	AACGTT	1 cut(s)	1130
AclWI	GGATC	6 cut(s)	277, 468, 1916, 1929, 2252, 2265
AcsI	RAATTY	4 cut(s)	22, 705, 1538, 2580
AcuI	CTGAAG	3 cut(s)	500, 1695, 1727
AcyI	GRCGYC	1 cut(s)	620
AfaI	GTAC	3 cut(s)	1784, 2280, 2563
AfiI	CCNNNNNNNGG	6 cut(s)	224, 335, 1022, 1997, 2307, 2686
AflII	CTTAAG	3 cut(s)	434, 1109, 2711
AflIII	ACRYGT	1 cut(s)	1860
AhdI	GACNNNNNGTC	2 cut(s)	883, 2516
AhlI	ACTAGT	3 cut(s)	902, 1034, 2656
AjnI	CCWGG	2 cut(s)	2361, 2684
Alw21I	GWGCWC	5 cut(s)	199, 369, 1615, 2215, 2667
AlwI	GGATC	6 cut(s)	277, 468, 1916, 1929, 2252, 2265
AlwNI	CAGNNNCTG	3 cut(s)	478, 946, 1478
Ama87I	CYCGRG	3 cut(s)	362, 2115, 2585
AoxI	GGCC	5 cut(s)	138, 333, 1024, 1401, 2181
ApoI	RAATTY	4 cut(s)	22, 705, 1538, 2580
ArsI	GACNNNNNNTTYG	4 cut(s)	2390, 2422, 2518, 2550
AseI	ATTAAT	1 cut(s)	1295
AspLEI	GCGC	4 cut(s)	358, 622, 1569, 2368
AspS9I	GGNCC	6 cut(s)	139, 716, 1025, 1401, 1655, 2510
AsuC2I	CCSGG	4 cut(s)	985, 1597, 2116, 2117
AsuHPI	GGTGA	4 cut(s)	773, 1813, 1881, 2164
AsuII	TTCGAA	1 cut(s)	347
AvaI	CYCGRG	3 cut(s)	362, 2115, 2585
AvaII	GGWCC	3 cut(s)	716, 1655, 2510
AxyI	CCTNAGG	1 cut(s)	330
BamHI	GGATCC	2 cut(s)	1921, 2257
BanI	GGYRCC	1 cut(s)	619
BanII	GRGCYC	4 cut(s)	199, 369, 1615, 2667
Bbv12I	GWGCWC	5 cut(s)	199, 369, 1615, 2215, 2667
BccI	CCATC	6 cut(s)	185, 635, 1646, 1889, 1991, 2088
BceAI	ACGGC	2 cut(s)	61, 241
BcgI	CGANNNNNNTGC	6 cut(s)	412, 446, 671, 705, 1322, 1356
BciT130I	CCWGG	2 cut(s)	2363, 2686
BclI	TGATCA	1 cut(s)	559
BcnI	CCSGG	4 cut(s)	985, 1597, 2116, 2117
BcuI	ACTAGT	3 cut(s)	902, 1034, 2656
BfaI	CTAG	7 cut(s)	405, 638, 903, 1035, 1355, 2048, 2657
BfmI	CTRYAG	3 cut(s)	1209, 1559, 1590
BfoI	RGCGCY	3 cut(s)	359, 623, 2369
BfrI	CTTAAG	3 cut(s)	434, 1109, 2711
BglI	GCCNNNNNGGC	1 cut(s)	1082
BmcAI	AGTACT	1 cut(s)	1784
Bme1390I	CCNGG	6 cut(s)	985, 1597, 2116, 2117, 2363, 2686
Bme18I	GGWCC	3 cut(s)	716, 1655, 2510
BmeRI	GACNNNNNGTC	2 cut(s)	883, 2516
BmeT110I	CYCGRG	3 cut(s)	362, 2115, 2585
BmgT120I	GGNCC	6 cut(s)	139, 716, 1025, 1401, 1655, 2510
BmiI	GGNNCC	5 cut(s)	141, 621, 1402, 1923, 2259
BmrFI	CCNGG	6 cut(s)	985, 1597, 2116, 2117, 2363, 2686
BoxI	GACNNNNGTC	1 cut(s)	2321
BplI	GAGNNNNNCTC	2 cut(s)	1769, 1801
BpmI	CTGGAG	4 cut(s)	353, 1236, 1925, 2517
Bpu10I	CCTNAGC	3 cut(s)	2043, 2185, 2602
Bpu14I	TTCGAA	1 cut(s)	347
BpuMI	CCSGG	4 cut(s)	985, 1597, 2116, 2117
BsaBI	GATNNNNATC	3 cut(s)	768, 1158, 1181
BsaHI	GRCGYC	1 cut(s)	620
BsaI	GGTCTC	3 cut(s)	225, 715, 2636
BsaJI	CCNNGG	4 cut(s)	135, 294, 2115, 2685
Bsc4I	CCNNNNNNNGG	6 cut(s)	224, 335, 1022, 1997, 2307, 2686
Bse118I	RCCGGY	2 cut(s)	335, 616
Bse1I	ACTGG	5 cut(s)	1523, 1908, 2372, 2613, 2632
Bse21I	CCTNAGG	1 cut(s)	330
Bse3DI	GCAATG	3 cut(s)	1425, 2229, 2436
Bse8I	GATNNNNATC	3 cut(s)	768, 1158, 1181
BseBI	CCWGG	2 cut(s)	2363, 2686
BseDI	CCNNGG	4 cut(s)	135, 294, 2115, 2685
BseGI	GGATG	7 cut(s)	490, 600, 694, 817, 823, 2008, 2358
BseJI	GATNNNNATC	3 cut(s)	768, 1158, 1181
BseLI	CCNNNNNNNGG	6 cut(s)	224, 335, 1022, 1997, 2307, 2686
BseMI	GCAATG	3 cut(s)	1425, 2229, 2436
BseMII	CTCAG	8 cut(s)	144, 344, 740, 1258, 1695, 1767, 2034, 2616
BseNI	ACTGG	5 cut(s)	1523, 1908, 2372, 2613, 2632
BseRI	GAGGAG	6 cut(s)	100, 191, 194, 854, 857, 1793
BseYI	CCCAGC	3 cut(s)	1027, 1788, 2097
BshFI	GGCC	5 cut(s)	140, 335, 1026, 1403, 2183
BshNI	GGYRCC	1 cut(s)	619
BsiHKAI	GWGCWC	5 cut(s)	199, 369, 1615, 2215, 2667
BsiHKCI	CYCGRG	3 cut(s)	362, 2115, 2585
BsiSI	CCGG	6 cut(s)	28, 336, 617, 984, 1597, 2116
BslFI	GGGAC	5 cut(s)	53, 291, 1000, 2024, 2329
BslI	CCNNNNNNNGG	6 cut(s)	224, 335, 1022, 1997, 2307, 2686
BsmBI	CGTCTC	2 cut(s)	260, 1542
BsmFI	GGGAC	5 cut(s)	53, 291, 1000, 2024, 2329
BsmI	GAATGC	1 cut(s)	928
BsnI	GGCC	5 cut(s)	140, 335, 1026, 1403, 2183
Bso31I	GGTCTC	3 cut(s)	225, 715, 2636
BsoBI	CYCGRG	3 cut(s)	362, 2115, 2585
Bsp119I	TTCGAA	1 cut(s)	347
Bsp1286I	GDGCHC	5 cut(s)	199, 369, 1615, 2215, 2667
Bsp143I	GATC	6 cut(s)	269, 460, 559, 1312, 1921, 2257
BspANI	GGCC	5 cut(s)	140, 335, 1026, 1403, 2183
BspCNI	CTCAG	8 cut(s)	143, 343, 739, 1257, 1696, 1768, 2035, 2615
BspHI	TCATGA	1 cut(s)	463
BspLI	GGNNCC	5 cut(s)	141, 621, 1402, 1923, 2259
BspMAI	CTGCAG	3 cut(s)	1213, 1563, 1594
BspPI	GGATC	6 cut(s)	277, 468, 1916, 1929, 2252, 2265
BspQI	GCTCTTC	1 cut(s)	528
BspT104I	TTCGAA	1 cut(s)	347
BspT107I	GGYRCC	1 cut(s)	619
BspTI	CTTAAG	3 cut(s)	434, 1109, 2711
BspTNI	GGTCTC	3 cut(s)	225, 715, 2636
BsrDI	GCAATG	3 cut(s)	1425, 2229, 2436
BsrFI	RCCGGY	2 cut(s)	335, 616
BsrI	ACTGG	5 cut(s)	1523, 1908, 2372, 2613, 2632
BssAI	RCCGGY	2 cut(s)	335, 616
BssECI	CCNNGG	4 cut(s)	135, 294, 2115, 2685
BssMI	GATC	6 cut(s)	269, 460, 559, 1312, 1921, 2257
BssNI	GRCGYC	1 cut(s)	620
BssT1I	CCWWGG	1 cut(s)	294
Bst2UI	CCWGG	2 cut(s)	2363, 2686
Bst4CI	ACNGT	7 cut(s)	14, 65, 236, 898, 1426, 1873, 2534
Bst6I	CTCTTC	4 cut(s)	253, 292, 528, 1932
BstACI	GRCGYC	1 cut(s)	620
BstAFI	CTTAAG	3 cut(s)	434, 1109, 2711
BstAPI	GCANNNNNTGC	2 cut(s)	946, 1969
BstBI	TTCGAA	1 cut(s)	347
BstC8I	GCNNGC	7 cut(s)	337, 920, 1074, 1611, 1632, 2215, 2638
BstF5I	GGATG	7 cut(s)	490, 600, 694, 817, 823, 2008, 2358
BstH2I	RGCGCY	3 cut(s)	359, 623, 2369
BstHHI	GCGC	4 cut(s)	358, 622, 1569, 2368
BstKTI	GATC	6 cut(s)	272, 463, 562, 1315, 1924, 2260
BstMBI	GATC	6 cut(s)	269, 460, 559, 1312, 1921, 2257
BstNI	CCWGG	2 cut(s)	2363, 2686
BstNSI	RCATGY	2 cut(s)	1343, 1864
BstPAI	GACNNNNGTC	1 cut(s)	2321
BstSCI	CCNGG	6 cut(s)	983, 1595, 2114, 2115, 2361, 2684
BstSFI	CTRYAG	3 cut(s)	1209, 1559, 1590
BstX2I	RGATCY	3 cut(s)	269, 1921, 2257
BstYI	RGATCY	3 cut(s)	269, 1921, 2257
Bsu36I	CCTNAGG	1 cut(s)	330
BsuRI	GGCC	5 cut(s)	140, 335, 1026, 1403, 2183
BtgZI	GCGATG	1 cut(s)	66
BtsCI	GGATG	7 cut(s)	490, 600, 694, 817, 823, 2008, 2358
BtsI	GCAGTG	2 cut(s)	944, 1413
BtsIMutI	CAGTG	8 cut(s)	944, 1413, 1461, 1686, 1701, 1751, 2379, 2625
Cac8I	GCNNGC	7 cut(s)	337, 920, 1074, 1611, 1632, 2215, 2638
CaiI	CAGNNNCTG	3 cut(s)	478, 946, 1478
CciI	TCATGA	1 cut(s)	463
CfoI	GCGC	4 cut(s)	358, 622, 1569, 2368
Cfr10I	RCCGGY	2 cut(s)	335, 616
Cfr13I	GGNCC	6 cut(s)	139, 716, 1025, 1401, 1655, 2510
Cfr9I	CCCGGG	1 cut(s)	2115
CpoI	CGGWCCG	1 cut(s)	716
CseI	GACGC	3 cut(s)	394, 1158, 2506
Csp6I	GTAC	3 cut(s)	1783, 2279, 2562
CspI	CGGWCCG	1 cut(s)	716
CviQI	GTAC	3 cut(s)	1783, 2279, 2562
DinI	GGCGCC	1 cut(s)	621
DpnI	GATC	6 cut(s)	271, 462, 561, 1314, 1923, 2259
DpnII	GATC	6 cut(s)	269, 460, 559, 1312, 1921, 2257
DriI	GACNNNNNGTC	2 cut(s)	883, 2516
Eam1104I	CTCTTC	4 cut(s)	253, 292, 528, 1932
Eam1105I	GACNNNNNGTC	2 cut(s)	883, 2516
EarI	CTCTTC	4 cut(s)	253, 292, 528, 1932
Ecl136II	GAGCTC	4 cut(s)	197, 367, 1613, 2665
Eco130I	CCWWGG	1 cut(s)	294
Eco147I	AGGCCT	1 cut(s)	2183
Eco24I	GRGCYC	4 cut(s)	199, 369, 1615, 2667
Eco31I	GGTCTC	3 cut(s)	225, 715, 2636
Eco47I	GGWCC	3 cut(s)	716, 1655, 2510
Eco53kI	GAGCTC	4 cut(s)	197, 367, 1613, 2665
Eco57I	CTGAAG	3 cut(s)	500, 1695, 1727
Eco81I	CCTNAGG	1 cut(s)	330
Eco88I	CYCGRG	3 cut(s)	362, 2115, 2585
EcoICRI	GAGCTC	4 cut(s)	197, 367, 1613, 2665
EcoRI	GAATTC	1 cut(s)	2580
EcoRII	CCWGG	2 cut(s)	2361, 2684
EcoT14I	CCWWGG	1 cut(s)	294
EcoT22I	ATGCAT	1 cut(s)	1774
EcoT38I	GRGCYC	4 cut(s)	199, 369, 1615, 2667
EgeI	GGCGCC	1 cut(s)	621
EheI	GGCGCC	1 cut(s)	621
ErhI	CCWWGG	1 cut(s)	294
Esp3I	CGTCTC	2 cut(s)	260, 1542
FalI	AAGNNNNNCTT	2 cut(s)	1056, 1088
FaqI	GGGAC	5 cut(s)	53, 291, 1000, 2024, 2329
FauI	CCCGC	2 cut(s)	316, 2645
FbaI	TGATCA	1 cut(s)	559
FokI	GGATG	7 cut(s)	497, 607, 701, 824, 830, 2015, 2345
FriOI	GRGCYC	4 cut(s)	199, 369, 1615, 2667
FspBI	CTAG	7 cut(s)	405, 638, 903, 1035, 1355, 2048, 2657
GlaI	GCGC	4 cut(s)	357, 621, 1568, 2367
GsaI	CCCAGC	3 cut(s)	1031, 1792, 2101
GsuI	CTGGAG	4 cut(s)	353, 1236, 1925, 2517
HaeII	RGCGCY	3 cut(s)	359, 623, 2369
HaeIII	GGCC	5 cut(s)	140, 335, 1026, 1403, 2183
HapII	CCGG	6 cut(s)	28, 336, 617, 984, 1597, 2116
HgaI	GACGC	3 cut(s)	394, 1158, 2506
HhaI	GCGC	4 cut(s)	358, 622, 1569, 2368
Hin1I	GRCGYC	1 cut(s)	620
Hin6I	GCGC	4 cut(s)	356, 620, 1567, 2366
HinP1I	GCGC	4 cut(s)	356, 620, 1567, 2366
HindIII	AAGCTT	3 cut(s)	1106, 1529, 2146
HinfI	GANTC	8 cut(s)	100, 475, 675, 1115, 1159, 1516, 1679, 2478
HpaII	CCGG	6 cut(s)	28, 336, 617, 984, 1597, 2116
HphI	GGTGA	4 cut(s)	773, 1813, 1881, 2164
Hpy166II	GTNNAC	1 cut(s)	2505
Hpy8I	GTNNAC	1 cut(s)	2505
Hpy99I	CGWCG	7 cut(s)	47, 173, 176, 306, 686, 716, 1174
HpyCH4III	ACNGT	7 cut(s)	14, 65, 236, 898, 1426, 1873, 2534
HpyCH4IV	ACGT	4 cut(s)	301, 321, 607, 1130
HpySE526I	ACGT	4 cut(s)	301, 321, 607, 1130
Hsp92I	GRCGYC	1 cut(s)	620
HspAI	GCGC	4 cut(s)	356, 620, 1567, 2366
KasI	GGCGCC	1 cut(s)	619
KroI	GCCGGC	1 cut(s)	335
KroNI	GCCGGC	1 cut(s)	337
Ksp22I	TGATCA	1 cut(s)	559
Kzo9I	GATC	6 cut(s)	269, 460, 559, 1312, 1921, 2257
LguI	GCTCTTC	1 cut(s)	528
LmnI	GCTCC	7 cut(s)	194, 202, 372, 844, 1018, 1906, 2670
MaeI	CTAG	7 cut(s)	405, 638, 903, 1035, 1355, 2048, 2657
MaeII	ACGT	4 cut(s)	301, 321, 607, 1130
MalI	GATC	6 cut(s)	271, 462, 561, 1314, 1923, 2259
MboI	GATC	6 cut(s)	269, 460, 559, 1312, 1921, 2257
MflI	RGATCY	3 cut(s)	269, 1921, 2257
MhlI	GDGCHC	5 cut(s)	199, 369, 1615, 2215, 2667
Mly113I	GGCGCC	1 cut(s)	620
MlyI	GAGTC	3 cut(s)	94, 484, 684
MmeI	TCCRAC	2 cut(s)	2273, 2358
Mph1103I	ATGCAT	1 cut(s)	1774
MroNI	GCCGGC	1 cut(s)	335
MslI	CAYNNNNRTG	3 cut(s)	546, 1935, 2673
MspA1I	CMGCKG	2 cut(s)	1214, 2542
MspCI	CTTAAG	3 cut(s)	434, 1109, 2711
MspI	CCGG	6 cut(s)	28, 336, 617, 984, 1597, 2116
MspR9I	CCNGG	6 cut(s)	985, 1597, 2116, 2117, 2363, 2686
Mva1269I	GAATGC	1 cut(s)	928
MvaI	CCWGG	2 cut(s)	2363, 2686
NaeI	GCCGGC	1 cut(s)	337
NarI	GGCGCC	1 cut(s)	620
NciI	CCSGG	4 cut(s)	985, 1597, 2116, 2117
NdeII	GATC	6 cut(s)	269, 460, 559, 1312, 1921, 2257
NgoMIV	GCCGGC	1 cut(s)	335
NlaIV	GGNNCC	5 cut(s)	141, 621, 1402, 1923, 2259
NmeAIII	GCCGAG	4 cut(s)	116, 237, 442, 1093
NmuCI	GTSAC	9 cut(s)	205, 603, 1056, 1268, 1697, 2152, 2396, 2461, 2518
NsiI	ATGCAT	1 cut(s)	1774
NspI	RCATGY	2 cut(s)	1343, 1864
NspV	TTCGAA	1 cut(s)	347
PaeR7I	CTCGAG	2 cut(s)	362, 2585
PagI	TCATGA	1 cut(s)	463
PceI	AGGCCT	1 cut(s)	2183
PciI	ACATGT	1 cut(s)	1860
PciSI	GCTCTTC	1 cut(s)	528
PcsI	WCGNNNNNNNCGW	3 cut(s)	48, 89, 171
PctI	GAATGC	1 cut(s)	928
PdiI	GCCGGC	1 cut(s)	337
PfeI	GAWTC	5 cut(s)	1115, 1159, 1516, 1679, 2478
PflFI	GACNNNGTC	2 cut(s)	236, 1168
PflMI	CCANNNNNTGG	1 cut(s)	1997
PleI	GAGTC	3 cut(s)	94, 483, 683
PluTI	GGCGCC	1 cut(s)	623
PpsI	GAGTC	3 cut(s)	94, 483, 683
PscI	ACATGT	1 cut(s)	1860
PshAI	GACNNNNGTC	1 cut(s)	2321
PshBI	ATTAAT	1 cut(s)	1295
PsiI	TTATAA	1 cut(s)	1719
Psp124BI	GAGCTC	4 cut(s)	199, 369, 1615, 2667
Psp1406I	AACGTT	1 cut(s)	1130
Psp6I	CCWGG	2 cut(s)	2361, 2684
PspFI	CCCAGC	3 cut(s)	1027, 1788, 2097
PspGI	CCWGG	2 cut(s)	2361, 2684
PspN4I	GGNNCC	5 cut(s)	141, 621, 1402, 1923, 2259
PspPI	GGNCC	6 cut(s)	139, 716, 1025, 1401, 1655, 2510
PspXI	VCTCGAGB	1 cut(s)	362
PstI	CTGCAG	3 cut(s)	1213, 1563, 1594
PstNI	CAGNNNCTG	3 cut(s)	478, 946, 1478
PsuI	RGATCY	3 cut(s)	269, 1921, 2257
PsyI	GACNNNGTC	2 cut(s)	236, 1168
PvuII	CAGCTG	1 cut(s)	1214
RsaI	GTAC	3 cut(s)	1784, 2280, 2563
RsaNI	GTAC	3 cut(s)	1783, 2279, 2562
RseI	CAYNNNNRTG	3 cut(s)	546, 1935, 2673
Rsr2I	CGGWCCG	1 cut(s)	716
RsrII	CGGWCCG	1 cut(s)	716
SacI	GAGCTC	4 cut(s)	199, 369, 1615, 2667
SapI	GCTCTTC	1 cut(s)	528
Sau3AI	GATC	6 cut(s)	269, 460, 559, 1312, 1921, 2257
Sau96I	GGNCC	6 cut(s)	139, 716, 1025, 1401, 1655, 2510
ScaI	AGTACT	1 cut(s)	1784
SchI	GAGTC	3 cut(s)	94, 484, 684
ScrFI	CCNGG	6 cut(s)	985, 1597, 2116, 2117, 2363, 2686
SduI	GDGCHC	5 cut(s)	199, 369, 1615, 2215, 2667
SfcI	CTRYAG	3 cut(s)	1209, 1559, 1590
SfoI	GGCGCC	1 cut(s)	621
Sfr274I	CTCGAG	2 cut(s)	362, 2585
SfuI	TTCGAA	1 cut(s)	347
SgrAI	CRCCGGYG	1 cut(s)	616
SinI	GGWCC	3 cut(s)	716, 1655, 2510
SlaI	CTCGAG	2 cut(s)	362, 2585
SmaI	CCCGGG	1 cut(s)	2117
SmiMI	CAYNNNNRTG	3 cut(s)	546, 1935, 2673
SmlI	CTYRAG	5 cut(s)	362, 434, 1109, 2585, 2711
SmoI	CTYRAG	5 cut(s)	362, 434, 1109, 2585, 2711
SpeI	ACTAGT	3 cut(s)	902, 1034, 2656
SseBI	AGGCCT	1 cut(s)	2183
SspDI	GGCGCC	1 cut(s)	619
SspMI	CTAG	7 cut(s)	405, 638, 903, 1035, 1355, 2048, 2657
SstI	GAGCTC	4 cut(s)	199, 369, 1615, 2667
StuI	AGGCCT	1 cut(s)	2183
StyD4I	CCNGG	6 cut(s)	983, 1595, 2114, 2115, 2361, 2684
StyI	CCWWGG	1 cut(s)	294
TaaI	ACNGT	7 cut(s)	14, 65, 236, 898, 1426, 1873, 2534
TaiI	ACGT	4 cut(s)	304, 324, 610, 1133
TaqI	TCGA	9 cut(s)	98, 113, 347, 363, 516, 1615, 2174, 2586, 2661
TaqII	GACCGA	1 cut(s)	704
TatI	WGTACW	2 cut(s)	1782, 2561
TauI	GCSGC	4 cut(s)	34, 51, 1406, 2303
TfiI	GAWTC	5 cut(s)	1115, 1159, 1516, 1679, 2478
TscAI	CASTG	8 cut(s)	951, 1413, 1461, 1693, 1708, 1751, 2379, 2632
TseFI	GTSAC	9 cut(s)	205, 603, 1056, 1268, 1697, 2152, 2396, 2461, 2518
Tsp45I	GTSAC	9 cut(s)	205, 603, 1056, 1268, 1697, 2152, 2396, 2461, 2518
TspGWI	ACGGA	2 cut(s)	397, 2315
TspMI	CCCGGG	1 cut(s)	2115
TspRI	CASTG	8 cut(s)	951, 1413, 1461, 1693, 1708, 1751, 2379, 2632
Tth111I	GACNNNGTC	2 cut(s)	236, 1168
Van91I	CCANNNNNTGG	1 cut(s)	1997
Vha464I	CTTAAG	3 cut(s)	434, 1109, 2711
VpaK11BI	GGWCC	3 cut(s)	716, 1655, 2510
VspI	ATTAAT	1 cut(s)	1295
XapI	RAATTY	4 cut(s)	22, 705, 1538, 2580
XbaI	TCTAGA	1 cut(s)	1354
XceI	RCATGY	2 cut(s)	1343, 1864
XhoI	CTCGAG	2 cut(s)	362, 2585
XmaI	CCCGGG	1 cut(s)	2115
XspI	CTAG	7 cut(s)	405, 638, 903, 1035, 1355, 2048, 2657
ZrmI	AGTACT	1 cut(s)	1784
Zsp2I	ATGCAT	1 cut(s)	1774

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.