Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002642.1

Orthogroup ID

OG0007740

Physical Location & Seq

Genomic Coordinates Reverse (-)

8110 .. 14190

Gene Structure 6081 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002642.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2811 bp

atgagctccgccagagcgaagaacttccgccgccgcatcgacgacgacgacgatgacgacgccgataccccttcaaccacctccactctcaaatccctatcaaaaccctcctcctcttcctccgcctccgcctccgccaagcccaagaagcctcagagccaagcccccaagctcctcagcttcgccgacgacgaagaaaacgccacgccgtctcgctcctcctcctccaagcgcgacaagtcgtcttctcgcctcgccaagccctcctcagctcacaagctgacggccgccaaggaccgtttggtaaactcctcctcctcctcctccgtctcttcttctcttccctccaatgtccagccccaagctggaacttacaccaaggaagccctccgtgagcttcagaagaacacgcgaaccctagccagctctagaccctcctccgccgccgccgagcccaccattgttctcaagggcttgattaagcccgccgccgccggctcgatcgccgaggccgtgaacggagccagagagctggactccgataacgacgaagtgcaaggagggaacaaggatagggttgatgccgagtcacgattggcttccatggggatcgacaaggataggtcggagtatcctgatcaagccaccatagaagccattcggaagaaaagggagcggctccggaagtccaagcccgccgcgccggatttcatttcattggattcggggagtaatcacggcgcggcggaggggttgagtgatgaggagcccgagtttcggaaccgaattgcaatgtttggggagaagatggagggtagtaagaagggtgtgtttgaggatgttgatgatagggaagtggatggtggtggattgagaaaagagagcctagtagtccaagatgacgatgaggatgaagaagagaagatttgggaggaagagcagtttaggaaagggttggggaagagagtggatgatggctctagtataggggttagtgctagtgttcctagagttcatagtgtgccacagcccaaggctacttactctgcaatcgctggctatagtttggcacagactctgcctggtgtgtccagtataggaggggcaacaggagcaccacaaggttcgaatgctatgtccataaatgagcaagctgaaattgctcagaaagctttgcaggaaaatgtgaagaagcttaaggaaagtcacggaagaacacagatgtcactaactaaggctgatgagaatttatctgcctcactattgaacattactgctcttgaaaagtctctgtctgctgctgacgtgaagtacaagttcatgcaagagcttcgcgattttgtctctaccatatgtgactttttgcaggataaggctcccttgatagaggagcttgaagaggaaatgcagaagcaacgtgatgaacgtgcatcagctatttttgaaagaagaattgctgataatgatgatgaaatgatggaagtagaagcagctgtaaatgcagcaatgtctattttcagtaaagaaggtaccagtgctgaaataattgcagttgctaaaagtgcagcacaggctgcttctgctgctgtgagagaacaaacaaatttaccagtcaagctagatgaatttggtagagatatgaaccttaagaaacgtatggatatgaaaagcagggccgaggctcgtcaacgcaggagaaaaaggtatgaagctaagagagagtcatccatggatgtggacagtcctaatcggacggttgaaggagaatcaagcaccgacgagagtgacagtgagagtaaagagtacgagtcacaccgccagttggtgcttgggactgctgatcaagttttcagtgatgcaactgaggaatattcacaactttcagctgtcaaagaaaggtttgaagaatggaagagagagtatcgatccagctaccgtgatgcttacatgtcattgagtgttcctgttatattctctccgtacgtaaggctggagctcttgaagtgggaccctctccgtgagaacacagattttgtgaatatgagctggcatttattattagagaattacggtttaccggaggatggttcggattttctatctgatgatgctgatgctaaccttatccctgcattggtggaaaaggttgcattacccattttgcatcatcaaattgttcactgctgggatattctcagtacaagagaaacaaagaatgcagttgctgccacaagcttggtaacagattatgtctcttccagtgaggctcttgaagatttattagtagctattcacacccgtctggcagatgctgtctcaaaacttacggtcccaacatggagccctcttgtattgaaagcagtaccaaatgctgcaagaattgcagcatatcgatttggcatgtctgttcgtttgatgaaaaatatctgcttgtggaaagaagtacttgctttgccagttctagagaagcttgctattaatgaacttttgtgtggcaaagttctacctcacattcgaagcattgctgccaatgttaatgatgcagttacaagaactgaaaggattattgcttctctatcaggggtgtggtcaggttcagatgtcacaggagaccgtagccgcaagttgcaatcactggtggattatgtgctgacgctgggaaagactatagagaagaagcattcgctgggtgtgacacaaagtgaaactggtggactggctcgtaggttgaagaagatgctggttgagctcaacgagtatgacaaggcgagggacgtagctaggaccttccatcttaaagaggcattgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000122 GO:0000375 GO:0000377 GO:0000398 GO:0000976 GO:0000977 GO:0000978 GO:0000981 GO:0000982 GO:0000987 GO:0001012 GO:0001067 GO:0001078 GO:0001227 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006355 GO:0006357 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0008380 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0016070 GO:0016071 GO:0017148 GO:0019219 GO:0019222 GO:0022402 GO:0030371 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032268 GO:0032269 GO:0034248 GO:0034249 GO:0034641 GO:0034645 GO:0042023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044786 GO:0045182 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1902679 GO:1903506 GO:1903507 GO:1990837 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GCFC NTR2

Protein Analysis

936

Amino Acids

102.95

Weight (kDa)

5.53

Isoelectric Point (pI)

49.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007740)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08550
fragaria_vesca	FvH4_4g28100 FvH4_4g28100 FvH4_4g28100 FvH4_4g28100 FvH4_4g28100
malus_domestica	MD13G1046700.v1.1 MD16G1048400.v1.1
prunus_persica	Prupe.1G305200_v2.0.a1 Prupe.1G305200_v2.0.a1 Prupe.1G305200_v2.0.a1 Prupe.1G305200_v2.0.a1
pyrus_communis	pycom13g04090 pycom16g04230
rosa_chinensis	RchiOBHm_Chr4g0435851
rosa_laevigata	RLG00000006554
rosa_multiflora	Rmu_sc0002642.1_g000001
rosa_roxburghii	Rroxscaffold_5G00377030
rosa_rugosa	Rorug04G0290000
rosa_samantha	Rh4AG344300 Rh4BG353200 Rh4CG367600 Rh4DG347100
rosa_wichuraiana	Rw4G030080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1529
AccB1I	GGYRCC	1 cut(s)	1529
AccBSI	CCGCTC	1 cut(s)	676
AccII	CGCG	5 cut(s)	234, 412, 701, 743, 1335
AccIII	TCCGGA	1 cut(s)	681
AclWI	GGATC	2 cut(s)	617, 1920
AcoI	YGGCCR	1 cut(s)	285
AcsI	RAATTY	3 cut(s)	1246, 1603, 1625
AcuI	CTGAAG	1 cut(s)	383
AcyI	GRCGYC	1 cut(s)	60
AdeI	CACNNNGTG	1 cut(s)	2702
AfaI	GTAC	7 cut(s)	1313, 1531, 1805, 1982, 2200, 2364, 2445
AfiI	CCNNNNNNNGG	5 cut(s)	365, 777, 1822, 2084, 2134
AflII	CTTAAG	2 cut(s)	1196, 1646
AflIII	ACRYGT	1 cut(s)	1947
AhdI	GACNNNNNGTC	1 cut(s)	241
AjiI	CACGTC	1 cut(s)	1306
AjnI	CCWGG	1 cut(s)	1081
Alw21I	GWGCWC	4 cut(s)	8, 1117, 1998, 2751
Alw26I	GTCTC	7 cut(s)	216, 334, 1293, 1348, 2257, 2320, 2604
AlwI	GGATC	2 cut(s)	617, 1920
AlwNI	CAGNNNCTG	3 cut(s)	1078, 2225, 2312
Ama87I	CYCGRG	1 cut(s)	770
Aor13HI	TCCGGA	1 cut(s)	681
AoxI	GGCC	3 cut(s)	285, 510, 1674
ApoI	RAATTY	3 cut(s)	1246, 1603, 1625
ArsI	GACNNNNNNTTYG	2 cut(s)	1121, 1153
AseI	ATTAAT	1 cut(s)	2478
Asp700I	GAANNNNTTC	2 cut(s)	23, 657
Asp718I	GGTACC	1 cut(s)	1529
AspLEI	GCGC	3 cut(s)	234, 703, 743
AspS9I	GGNCC	5 cut(s)	295, 1674, 2008, 2329, 2784
AsuII	TTCGAA	2 cut(s)	1127, 2515
AvaI	CYCGRG	1 cut(s)	770
AvaII	GGWCC	4 cut(s)	295, 2008, 2329, 2784
BanI	GGYRCC	1 cut(s)	1529
BanII	GRGCYC	6 cut(s)	8, 456, 771, 1998, 2345, 2751
BbsI	GAAGAC	1 cut(s)	237
Bbv12I	GWGCWC	4 cut(s)	8, 1117, 1998, 2751
BbvCI	CCTCAGC	2 cut(s)	176, 268
BccI	CCATC	6 cut(s)	802, 854, 968, 1471, 2078, 2799
BceAI	ACGGC	4 cut(s)	193, 300, 497, 754
BcgI	CGANNNNNNTGC	2 cut(s)	1313, 1347
BciT130I	CCWGG	1 cut(s)	1083
BciVI	GTATCC	1 cut(s)	642
BclI	TGATCA	2 cut(s)	637, 1840
BcoDI	GTCTC	7 cut(s)	216, 334, 1293, 1348, 2257, 2320, 2604
BfaI	CTAG	9 cut(s)	419, 429, 887, 981, 999, 1008, 1619, 2462, 2781
BfmI	CTRYAG	2 cut(s)	1060, 2667
BfrI	CTTAAG	2 cut(s)	1196, 1646
BfuI	GTATCC	1 cut(s)	642
BmcAI	AGTACT	1 cut(s)	2445
Bme1390I	CCNGG	1 cut(s)	1083
Bme18I	GGWCC	4 cut(s)	295, 2008, 2329, 2784
BmeRI	GACNNNNNGTC	1 cut(s)	241
BmeT110I	CYCGRG	1 cut(s)	770
BmgBI	CACGTC	1 cut(s)	1306
BmgT120I	GGNCC	5 cut(s)	295, 1674, 2008, 2329, 2784
BmrFI	CCNGG	1 cut(s)	1083
BpiI	GAAGAC	1 cut(s)	237
BplI	GAGNNNNNCTC	2 cut(s)	521, 553
BpmI	CTGGAG	1 cut(s)	2012
Bpu10I	CCTNAGC	2 cut(s)	176, 268
Bpu14I	TTCGAA	2 cut(s)	1127, 2515
BpuEI	CTTGAG	1 cut(s)	452
Bsa29I	ATCGAT	2 cut(s)	1924, 2392
BsaAI	YACGTR	1 cut(s)	1984
BsaHI	GRCGYC	1 cut(s)	60
BsaI	GGTCTC	1 cut(s)	2604
BsaJI	CCNNGG	7 cut(s)	291, 378, 507, 603, 1032, 1677, 1728
BsaWI	WCCGGW	2 cut(s)	681, 2077
BsaXI	ACNNNNNCTCC	4 cut(s)	299, 329, 758, 788
Bsc4I	CCNNNNNNNGG	5 cut(s)	365, 777, 1822, 2084, 2134
Bse118I	RCCGGY	1 cut(s)	494
Bse1I	ACTGG	9 cut(s)	1092, 1533, 1610, 1819, 2259, 2456, 2640, 2713, 2721
Bse3DI	GCAATG	3 cut(s)	798, 1512, 2520
BseAI	TCCGGA	1 cut(s)	681
BseBI	CCWGG	1 cut(s)	1083
BseCI	ATCGAT	2 cut(s)	1924, 2392
BseDI	CCNNGG	7 cut(s)	291, 378, 507, 603, 1032, 1677, 1728
BseGI	GGATG	7 cut(s)	844, 865, 916, 976, 1724, 1738, 2089
BseLI	CCNNNNNNNGG	5 cut(s)	365, 777, 1822, 2084, 2134
BseMI	GCAATG	3 cut(s)	798, 1512, 2520
BseMII	CTCAG	6 cut(s)	167, 190, 282, 1178, 1854, 2209
BseNI	ACTGG	9 cut(s)	1092, 1533, 1610, 1819, 2259, 2456, 2640, 2713, 2721
BseX3I	CGGCCG	1 cut(s)	285
BseYI	CCCAGC	3 cut(s)	2184, 2656, 2686
BsgI	GTGCAG	1 cut(s)	1584
Bsh1236I	CGCG	5 cut(s)	234, 412, 701, 743, 1335
Bsh1285I	CGRYCG	2 cut(s)	288, 504
BshFI	GGCC	3 cut(s)	287, 512, 1676
BshNI	GGYRCC	1 cut(s)	1529
BshVI	ATCGAT	2 cut(s)	1924, 2392
BsiEI	CGRYCG	2 cut(s)	288, 504
BsiHKAI	GWGCWC	4 cut(s)	8, 1117, 1998, 2751
BsiHKCI	CYCGRG	1 cut(s)	770
BsiSI	CCGG	4 cut(s)	495, 682, 704, 2078
BsiWI	CGTACG	1 cut(s)	1980
BslFI	GGGAC	4 cut(s)	1846, 2021, 2315, 2786
BslI	CCNNNNNNNGG	5 cut(s)	365, 777, 1822, 2084, 2134
BsmAI	GTCTC	7 cut(s)	216, 334, 1293, 1348, 2257, 2320, 2604
BsmBI	CGTCTC	2 cut(s)	216, 334
BsmFI	GGGAC	4 cut(s)	1846, 2021, 2315, 2786
BsmI	GAATGC	3 cut(s)	1135, 2221, 2680
BsnI	GGCC	3 cut(s)	287, 512, 1676
Bso31I	GGTCTC	1 cut(s)	2604
BsoBI	CYCGRG	1 cut(s)	770
Bsp119I	TTCGAA	2 cut(s)	1127, 2515
Bsp1286I	GDGCHC	7 cut(s)	8, 456, 771, 1117, 1998, 2345, 2751
Bsp13I	TCCGGA	1 cut(s)	681
Bsp143I	GATC	5 cut(s)	501, 609, 637, 1840, 1925
Bsp19I	CCATGG	2 cut(s)	603, 1728
Bsp68I	TCGCGA	1 cut(s)	1335
BspANI	GGCC	3 cut(s)	287, 512, 1676
BspCNI	CTCAG	6 cut(s)	166, 189, 281, 1177, 1855, 2208
BspDI	ATCGAT	2 cut(s)	1924, 2392
BspEI	TCCGGA	1 cut(s)	681
BspFNI	CGCG	5 cut(s)	234, 412, 701, 743, 1335
BspPI	GGATC	2 cut(s)	617, 1920
BspQI	GCTCTTC	1 cut(s)	930
BspT104I	TTCGAA	2 cut(s)	1127, 2515
BspT107I	GGYRCC	1 cut(s)	1529
BspTI	CTTAAG	2 cut(s)	1196, 1646
BspTNI	GGTCTC	1 cut(s)	2604
BsrBI	CCGCTC	1 cut(s)	676
BsrDI	GCAATG	3 cut(s)	798, 1512, 2520
BsrFI	RCCGGY	1 cut(s)	494
BsrI	ACTGG	9 cut(s)	1092, 1533, 1610, 1819, 2259, 2456, 2640, 2713, 2721
BssAI	RCCGGY	1 cut(s)	494
BssECI	CCNNGG	7 cut(s)	291, 378, 507, 603, 1032, 1677, 1728
BssMI	GATC	5 cut(s)	501, 609, 637, 1840, 1925
BssNI	GRCGYC	1 cut(s)	60
BssT1I	CCWWGG	5 cut(s)	291, 378, 603, 1032, 1728
Bst2UI	CCWGG	1 cut(s)	1083
Bst4CI	ACNGT	8 cut(s)	299, 1742, 1756, 1790, 1937, 2072, 2329, 2615
Bst6I	CTCTTC	9 cut(s)	121, 337, 345, 912, 930, 956, 1392, 1907, 2260
BstACI	GRCGYC	1 cut(s)	60
BstAFI	CTTAAG	2 cut(s)	1196, 1646
BstAPI	GCANNNNNTGC	3 cut(s)	1574, 2225, 2381
BstBAI	YACGTR	1 cut(s)	1984
BstBI	TTCGAA	2 cut(s)	1127, 2515
BstC8I	GCNNGC	8 cut(s)	424, 486, 496, 696, 1057, 1152, 2048, 2472
BstDEI	CTNAG	8 cut(s)	153, 176, 268, 1164, 1233, 1713, 1863, 2195
BstDSI	CCRYGG	2 cut(s)	603, 1728
BstF5I	GGATG	7 cut(s)	844, 865, 916, 976, 1724, 1738, 2089
BstFNI	CGCG	5 cut(s)	234, 412, 701, 743, 1335
BstHHI	GCGC	3 cut(s)	234, 703, 743
BstKTI	GATC	5 cut(s)	504, 612, 640, 1843, 1928
BstMAI	GTCTC	7 cut(s)	216, 334, 1293, 1348, 2257, 2320, 2604
BstMBI	GATC	5 cut(s)	501, 609, 637, 1840, 1925
BstMCI	CGRYCG	2 cut(s)	288, 504
BstNI	CCWGG	1 cut(s)	1083
BstNSI	RCATGY	2 cut(s)	1951, 2404
BstSCI	CCNGG	1 cut(s)	1081
BstSFI	CTRYAG	2 cut(s)	1060, 2667
BstSNI	TACGTA	1 cut(s)	1984
BstUI	CGCG	5 cut(s)	234, 412, 701, 743, 1335
BstV2I	GAAGAC	1 cut(s)	237
BstXI	CCANNNNNNTGG	3 cut(s)	532, 1735, 2236
BstZI	CGGCCG	1 cut(s)	285
Bsu15I	ATCGAT	2 cut(s)	1924, 2392
BsuI	GTATCC	1 cut(s)	642
BsuRI	GGCC	3 cut(s)	287, 512, 1676
BsuTUI	ATCGAT	2 cut(s)	1924, 2392
BtgI	CCRYGG	2 cut(s)	603, 1728
BtrI	CACGTC	1 cut(s)	1306
BtsCI	GGATG	7 cut(s)	844, 865, 916, 976, 1724, 1738, 2089
BtsI	GCAGTG	1 cut(s)	2179
BtsIMutI	CAGTG	6 cut(s)	1540, 1795, 1858, 2179, 2266, 2633
BtuMI	TCGCGA	1 cut(s)	1335
Cac8I	GCNNGC	8 cut(s)	424, 486, 496, 696, 1057, 1152, 2048, 2472
CaiI	CAGNNNCTG	3 cut(s)	1078, 2225, 2312
CfoI	GCGC	3 cut(s)	234, 703, 743
Cfr10I	RCCGGY	1 cut(s)	494
Cfr13I	GGNCC	5 cut(s)	295, 1674, 2008, 2329, 2784
ClaI	ATCGAT	2 cut(s)	1924, 2392
CseI	GACGC	2 cut(s)	68, 2662
Csp6I	GTAC	7 cut(s)	1312, 1530, 1804, 1981, 2199, 2363, 2444
CviAII	CATG	6 cut(s)	604, 1321, 1729, 1948, 2337, 2401
CviQI	GTAC	7 cut(s)	1312, 1530, 1804, 1981, 2199, 2363, 2444
DdeI	CTNAG	8 cut(s)	153, 176, 268, 1164, 1233, 1713, 1863, 2195
DpnI	GATC	5 cut(s)	503, 611, 639, 1842, 1927
DpnII	GATC	5 cut(s)	501, 609, 637, 1840, 1925
DraIII	CACNNNGTG	1 cut(s)	2702
DriI	GACNNNNNGTC	1 cut(s)	241
EaeI	YGGCCR	1 cut(s)	285
EagI	CGGCCG	1 cut(s)	285
Eam1104I	CTCTTC	9 cut(s)	121, 337, 345, 912, 930, 956, 1392, 1907, 2260
Eam1105I	GACNNNNNGTC	1 cut(s)	241
EarI	CTCTTC	9 cut(s)	121, 337, 345, 912, 930, 956, 1392, 1907, 2260
EciI	GGCGGA	6 cut(s)	17, 112, 118, 124, 430, 761
Ecl136II	GAGCTC	3 cut(s)	6, 1996, 2749
EclXI	CGGCCG	1 cut(s)	285
Eco105I	TACGTA	1 cut(s)	1984
Eco130I	CCWWGG	5 cut(s)	291, 378, 603, 1032, 1728
Eco24I	GRGCYC	6 cut(s)	8, 456, 771, 1998, 2345, 2751
Eco31I	GGTCTC	1 cut(s)	2604
Eco47I	GGWCC	4 cut(s)	295, 2008, 2329, 2784
Eco52I	CGGCCG	1 cut(s)	285
Eco53kI	GAGCTC	3 cut(s)	6, 1996, 2749
Eco57I	CTGAAG	1 cut(s)	383
Eco88I	CYCGRG	1 cut(s)	770
EcoICRI	GAGCTC	3 cut(s)	6, 1996, 2749
EcoO109I	RGGNCCY	2 cut(s)	2008, 2784
EcoRII	CCWGG	1 cut(s)	1081
EcoT14I	CCWWGG	5 cut(s)	291, 378, 603, 1032, 1728
EcoT38I	GRGCYC	6 cut(s)	8, 456, 771, 1998, 2345, 2751
ErhI	CCWWGG	5 cut(s)	291, 378, 603, 1032, 1728
Esp3I	CGTCTC	2 cut(s)	216, 334
FaeI	CATG	6 cut(s)	607, 1324, 1732, 1951, 2340, 2404
FalI	AAGNNNNNCTT	4 cut(s)	1364, 1396, 2430, 2462
FaqI	GGGAC	4 cut(s)	1846, 2021, 2315, 2786
FatI	CATG	6 cut(s)	603, 1320, 1728, 1947, 2336, 2400
FauI	CCCGC	2 cut(s)	493, 703
FauNDI	CATATG	1 cut(s)	1352
FbaI	TGATCA	2 cut(s)	637, 1840
FokI	GGATG	7 cut(s)	851, 872, 923, 983, 1711, 1745, 2096
FriOI	GRGCYC	6 cut(s)	8, 456, 771, 1998, 2345, 2751
FspBI	CTAG	9 cut(s)	419, 429, 887, 981, 999, 1008, 1619, 2462, 2781
GlaI	GCGC	3 cut(s)	233, 702, 742
GsaI	CCCAGC	3 cut(s)	2188, 2660, 2690
GsuI	CTGGAG	1 cut(s)	2012
HaeIII	GGCC	3 cut(s)	287, 512, 1676
HapII	CCGG	4 cut(s)	495, 682, 704, 2078
HgaI	GACGC	2 cut(s)	68, 2662
HhaI	GCGC	3 cut(s)	234, 703, 743
Hin1I	GRCGYC	1 cut(s)	60
Hin1II	CATG	6 cut(s)	607, 1324, 1732, 1951, 2340, 2404
Hin6I	GCGC	3 cut(s)	232, 701, 741
HinP1I	GCGC	3 cut(s)	232, 701, 741
HincII	GTYRAC	1 cut(s)	1688
HindII	GTYRAC	1 cut(s)	1688
HindIII	AAGCTT	4 cut(s)	1170, 1193, 2233, 2468
HinfI	GANTC	7 cut(s)	536, 587, 722, 1075, 1721, 1766, 1808
HpaII	CCGG	4 cut(s)	495, 682, 704, 2078
Hpy166II	GTNNAC	7 cut(s)	307, 517, 1688, 1738, 2075, 2179, 2714
Hpy188III	TCNNGA	9 cut(s)	429, 591, 635, 682, 1280, 1334, 1999, 2270, 2462
Hpy8I	GTNNAC	7 cut(s)	307, 517, 1688, 1738, 2075, 2179, 2714
Hpy99I	CGWCG	9 cut(s)	44, 47, 50, 53, 62, 191, 194, 551, 1781
HpyAV	CCTTC	5 cut(s)	81, 817, 1520, 1754, 2797
HpyCH4III	ACNGT	8 cut(s)	299, 1742, 1756, 1790, 1937, 2072, 2329, 2615
HpyCH4IV	ACGT	6 cut(s)	1305, 1417, 1426, 1654, 1983, 2775
HpyF3I	CTNAG	8 cut(s)	153, 176, 268, 1164, 1233, 1713, 1863, 2195
HpySE526I	ACGT	6 cut(s)	1305, 1417, 1426, 1654, 1983, 2775
Hsp92I	GRCGYC	1 cut(s)	60
Hsp92II	CATG	6 cut(s)	607, 1324, 1732, 1951, 2340, 2404
HspAI	GCGC	3 cut(s)	232, 701, 741
KflI	GGGWCCC	1 cut(s)	2008
Kpn2I	TCCGGA	1 cut(s)	681
KpnI	GGTACC	1 cut(s)	1533
KroI	GCCGGC	1 cut(s)	494
KroNI	GCCGGC	1 cut(s)	496
Ksp22I	TGATCA	2 cut(s)	637, 1840
Kzo9I	GATC	5 cut(s)	501, 609, 637, 1840, 1925
LguI	GCTCTTC	1 cut(s)	930
MaeI	CTAG	9 cut(s)	419, 429, 887, 981, 999, 1008, 1619, 2462, 2781
MaeII	ACGT	6 cut(s)	1305, 1417, 1426, 1654, 1983, 2775
MalI	GATC	5 cut(s)	503, 611, 639, 1842, 1927
MbiI	CCGCTC	1 cut(s)	676
MboI	GATC	5 cut(s)	501, 609, 637, 1840, 1925
MhlI	GDGCHC	7 cut(s)	8, 456, 771, 1117, 1998, 2345, 2751
MlyI	GAGTC	5 cut(s)	530, 596, 1069, 1730, 1817
MmeI	TCCRAC	1 cut(s)	606
MroI	TCCGGA	1 cut(s)	681
MroNI	GCCGGC	1 cut(s)	494
MroXI	GAANNNNTTC	2 cut(s)	23, 657
MseI	TTAA	6 cut(s)	480, 1197, 1647, 2478, 2535, 2796
MslI	CAYNNNNRTG	1 cut(s)	1733
MspA1I	CMGCKG	2 cut(s)	1493, 1886
MspCI	CTTAAG	2 cut(s)	1196, 1646
MspI	CCGG	4 cut(s)	495, 682, 704, 2078
MspR9I	CCNGG	1 cut(s)	1083
Mva1269I	GAATGC	3 cut(s)	1135, 2221, 2680
MvaI	CCWGG	1 cut(s)	1083
MvnI	CGCG	5 cut(s)	234, 412, 701, 743, 1335
NaeI	GCCGGC	1 cut(s)	496
NcoI	CCATGG	2 cut(s)	603, 1728
NdeI	CATATG	1 cut(s)	1352
NdeII	GATC	5 cut(s)	501, 609, 637, 1840, 1925
NgoMIV	GCCGGC	1 cut(s)	494
NlaIII	CATG	6 cut(s)	607, 1324, 1732, 1951, 2340, 2404
NmeAIII	GCCGAG	4 cut(s)	475, 532, 610, 1702
NmuCI	GTSAC	8 cut(s)	588, 1205, 1224, 1355, 1784, 1809, 2602, 2692
NruI	TCGCGA	1 cut(s)	1335
NspI	RCATGY	2 cut(s)	1951, 2404
NspV	TTCGAA	2 cut(s)	1127, 2515
PciI	ACATGT	1 cut(s)	1947
PciSI	GCTCTTC	1 cut(s)	930
PcsI	WCGNNNNNNNCGW	6 cut(s)	45, 48, 54, 189, 510, 1423
PctI	GAATGC	3 cut(s)	1135, 2221, 2680
PdiI	GCCGGC	1 cut(s)	496
PdmI	GAANNNNTTC	2 cut(s)	23, 657
PfeI	GAWTC	2 cut(s)	722, 1766
Pfl23II	CGTACG	1 cut(s)	1980
Ple19I	CGATCG	1 cut(s)	504
PleI	GAGTC	5 cut(s)	530, 595, 1069, 1729, 1816
PpsI	GAGTC	5 cut(s)	530, 595, 1069, 1729, 1816
Ppu21I	YACGTR	1 cut(s)	1984
PpuMI	RGGWCCY	2 cut(s)	2008, 2784
PscI	ACATGT	1 cut(s)	1947
PshBI	ATTAAT	1 cut(s)	2478
Psp124BI	GAGCTC	3 cut(s)	8, 1998, 2751
Psp5II	RGGWCCY	2 cut(s)	2008, 2784
Psp6I	CCWGG	1 cut(s)	1081
PspFI	CCCAGC	3 cut(s)	2184, 2656, 2686
PspGI	CCWGG	1 cut(s)	1081
PspLI	CGTACG	1 cut(s)	1980
PspPI	GGNCC	5 cut(s)	295, 1674, 2008, 2329, 2784
PspPPI	RGGWCCY	2 cut(s)	2008, 2784
PstNI	CAGNNNCTG	3 cut(s)	1078, 2225, 2312
PvuI	CGATCG	1 cut(s)	504
PvuII	CAGCTG	2 cut(s)	1493, 1886
RruI	TCGCGA	1 cut(s)	1335
RsaI	GTAC	7 cut(s)	1313, 1531, 1805, 1982, 2200, 2364, 2445
RsaNI	GTAC	7 cut(s)	1312, 1530, 1804, 1981, 2199, 2363, 2444
RseI	CAYNNNNRTG	1 cut(s)	1733
SacI	GAGCTC	3 cut(s)	8, 1998, 2751
SapI	GCTCTTC	1 cut(s)	930
SaqAI	TTAA	6 cut(s)	480, 1197, 1647, 2478, 2535, 2796
Sau3AI	GATC	5 cut(s)	501, 609, 637, 1840, 1925
Sau96I	GGNCC	5 cut(s)	295, 1674, 2008, 2329, 2784
ScaI	AGTACT	1 cut(s)	2445
SchI	GAGTC	5 cut(s)	530, 596, 1069, 1730, 1817
ScrFI	CCNGG	1 cut(s)	1083
SduI	GDGCHC	7 cut(s)	8, 456, 771, 1117, 1998, 2345, 2751
SfcI	CTRYAG	2 cut(s)	1060, 2667
SfuI	TTCGAA	2 cut(s)	1127, 2515
SinI	GGWCC	4 cut(s)	295, 2008, 2329, 2784
SmiMI	CAYNNNNRTG	1 cut(s)	1733
SmlI	CTYRAG	3 cut(s)	467, 1196, 1646
SmoI	CTYRAG	3 cut(s)	467, 1196, 1646
SnaBI	TACGTA	1 cut(s)	1984
SspI	AATATT	1 cut(s)	1871
SspMI	CTAG	9 cut(s)	419, 429, 887, 981, 999, 1008, 1619, 2462, 2781
SstI	GAGCTC	3 cut(s)	8, 1998, 2751
StyD4I	CCNGG	1 cut(s)	1081
StyI	CCWWGG	5 cut(s)	291, 378, 603, 1032, 1728
TaaI	ACNGT	8 cut(s)	299, 1742, 1756, 1790, 1937, 2072, 2329, 2615
TaiI	ACGT	6 cut(s)	1308, 1420, 1429, 1657, 1986, 2778
TaqI	TCGA	7 cut(s)	39, 500, 612, 1127, 1924, 2392, 2515
TatI	WGTACW	3 cut(s)	1311, 2198, 2443
TfiI	GAWTC	2 cut(s)	722, 1766
Tru1I	TTAA	6 cut(s)	480, 1197, 1647, 2478, 2535, 2796
Tru9I	TTAA	6 cut(s)	480, 1197, 1647, 2478, 2535, 2796
TscAI	CASTG	6 cut(s)	1540, 1795, 1858, 2186, 2266, 2640
TseFI	GTSAC	8 cut(s)	588, 1205, 1224, 1355, 1784, 1809, 2602, 2692
Tsp45I	GTSAC	8 cut(s)	588, 1205, 1224, 1355, 1784, 1809, 2602, 2692
TspGWI	ACGGA	6 cut(s)	316, 380, 534, 1224, 1968, 2006
TspRI	CASTG	6 cut(s)	1540, 1795, 1858, 2186, 2266, 2640
Vha464I	CTTAAG	2 cut(s)	1196, 1646
VpaK11BI	GGWCC	4 cut(s)	295, 2008, 2329, 2784
VspI	ATTAAT	1 cut(s)	2478
XapI	RAATTY	3 cut(s)	1246, 1603, 1625
XbaI	TCTAGA	2 cut(s)	428, 2461
XceI	RCATGY	2 cut(s)	1951, 2404
XcmI	CCANNNNNNNNNTGG	3 cut(s)	298, 362, 1826
XmnI	GAANNNNTTC	2 cut(s)	23, 657
XspI	CTAG	9 cut(s)	419, 429, 887, 981, 999, 1008, 1619, 2462, 2781
ZrmI	AGTACT	1 cut(s)	2445

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.