Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0007740

Physical Location & Seq

Genomic Coordinates Reverse (-)

29879312 .. 29885841

Gene Structure 6530 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G305200.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2811 bp

ATGAGCAGCAGAGCCAGAAACTTCCGCCGCCGTGCCGACGACGATGACGACAAAAACGACGACCCAAACGACACCGGAACCCCTGCGACGATACCCACCGTCAAATCCTCATCAAAACCCTCTTCTTCCTCCTCCTCCAAGCCCAAGAAGCCACACAATCAAGCCCCAAAGCTCCTCAGCTTCGTCGACGACGAAGAAAGCGCCGCAGCCCCATCTCGCTCCTCATCTTCCAAACCCGATAAGCCCTCTTCTCGTCTCGGCAAGCCCTCTTCAGCCCACAAGATGACAGCTCTCAAAGACCGTCTCGCTCATACCTCTTCTGTGTCGACTTCTCTGCCCTCCAACGTCCAACCCCAAGCTGGAACCTACACCAAAGAAGCGCTTCGTGAGCTCCAGAAGAACACGAGAACCCTGGCCAGCTCTCGACCCTCCTCCGAACCCACCATTGTTTTAAAGGGCCTTGTTAAACCCACCGGCACAATCTCCGATACGTTGAGAGAAGCCCGGGAGTTGGACTCCGACAACGATGAAGAGCAAGAGAAGGAAAGGGCTAGTTTGTTTAGGAGGGACAAGGACGACGCCGAGGCCCGATTGGCCTCGATGGGAATTGACAAGGCAAAGGGCTCATCTGGGTTGTTTCCTGATCAAGCCACCATAAATGCGATTCGGGCGAAGAGGGAACGGCTCAGAAAATCGAGGGCGGCGGCCCCGGATTTTATTTCATTGGATTCAGGGAGTAATCATGGCGCTGCTGAAGGGTTGAGCGATGAGGAGCCCGAGTTTCGAGGTCGAATCGCGATATTTGGGGATAATATGGAGGGTTCTAAAAAGGGTGTGTTTGAGGATGTTGATGATAGGGCAGCGGATGCTGTATTGAGGCAAAAAAGCATCGACCGTGATGAGGATGAAGACGAGGAAGAGAAGATTTGGGAAGAAGAGCAGTTCAGGAAAGGGTTGGGAAAAAGGATGGATGATGGTTCTAGTATAGGCGTGGTCAGCACTAGTGCTCCTGTGGTTCAGAGTGTGCCCCAACCGAAGGCTACTTACTCCGCAATGGCGGGGTATAGTTCAGTACAGAGCGTGCCTGTTGGGCCAAGTATAGGAGGGGCCATTGGAGCATCACAAGGTTCTAATGTGATGTCGATAAAGGCGCAAGCTGAGATTGCTAAGAAAGCTTTGGAGGAAAATGTGATGAAGCTTAAGGAAAGTCATGGCAGAACCATGTTGTCACTAACTAAGACTGATGAAAATTTGTCTTCCTCACTATTGAATATTACTGCTCTCGAGAAGTCTCTGTCTGCTGCTGATGAGAAGTATAAGTTCACGCAAAAGCTTCGTGACTTTGTTTCTGTCTTATGTAACTTTTTGCAGGTTAAAGCTCCTTTGATAGAAGAGCTTGAAGAGGAAATGCAGAAAATTCATGAACAACGTGCATCTGCTACTTTGGAAAGAAGAAGTGCGGATGATGATGAAATGATGGAAGTAGAAGCAGCTGTAAAAGCAGCAATGTCTATCTTCAGTAAAGAAGGTAGCAGTGCTGAAATAATTGCAGCTGCTAAAAGTGCAGCACAAGCTGCAACTACTGCTGAGAGGGAACAAACAAATCTACCAGTGAAATTAGATGAATTTGGTAGAGATATGAACCTTCAGAAACGTAGGGATATGAAAGGAAGGTCCGAGGCTCATCAACACAGGAAAAGAAGGTACGAATCTAAGAGACTGTCATCCATGGAAGTGGACAGTACCCATCGAACAATAGAAGGAGAATCAAGCACCGATGAGAGTGACAGTGAGAGTAATGCATATCACAAACACCGCCAGTTAGTACTCGAGACTGCTGCTCAAGTTTTCAGTGATGCAGCCGAGGAATATTCCAAACTTTCATTGGTCAAAGAAAGGTTTGAAGAATGGAAGACAGACTATGCATCCAGCTACCGTGATGCTTACATGTCATTAAGTGCTCCTGCTATATTTTCTCCATATGTAAGGCTGGAGCTTGTGAAGTGGGATCCTCTCCGTGAAAAAACAGATTTTCTAAATATGAGCTGGCATTCATTGTTAGCGGACTATAACTTACCGGAGGATGGAAGTGATTTTGCACCAGATGATGCTGATGCTAACCTTGTCCCTGATCTGGTGGAAAAGGTTGCATTGCCCATTTTGCTTCACCAAGTTGTTCACTGCTGGGACATTCTCAGTACACGAGAGACAAAGAATGCAGTTGCTGCCACAAGTGTGGTAACAGATTATGTTCCGCCTTCTAGTGAGGCTCTTGCAGATTTGTTGGTTGCTATTCGTACGCGTCTGGCTGATGCTGTCACCAATCTTACGGTCCCAACATGGAGCCCACTTGTATTGACAGCGGTGCCAAATGCAGCACGGATTGCAGCATATCGATTCGGTTTGTCTGTTCGTTTGATGAAAAACATCTGCTTGTGGAAAGAAATCCTTGCTTTTCCAGTTCTAGAGAAGCTTGCTATTGAGGAACTCTTATGTGGCAAAGTTCTACCTCATGTTCGAAGCATTGCTGCAAATGTTCATGATGCAATTACAAGAACTGAAAGGATTGTTGCTTCTCTATCTGGGGTGTGGGCAGGCTCAAATGTCACAGGGGACCGCCGTAAGTTGCAATCACTGGTGGATTATGTGCTCTCACTGGGAAGGACTCTGGAGAAGAAGCATTCGCTAGGTGTGACACAAAGTGAAATTAGCGGACTTGCCCGTAGATTGAAAAAAATGTTGGTTGACTTGAATGAGTATGACAAGGCTAGGGACCTAACTAGGACCTTCAATCTTAAGGAGGCACTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000122 GO:0000375 GO:0000377 GO:0000398 GO:0000976 GO:0000977 GO:0000978 GO:0000981 GO:0000982 GO:0000987 GO:0001012 GO:0001067 GO:0001078 GO:0001227 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006355 GO:0006357 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0008380 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0016070 GO:0016071 GO:0017148 GO:0019219 GO:0019222 GO:0022402 GO:0030371 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032268 GO:0032269 GO:0034248 GO:0034249 GO:0034641 GO:0034645 GO:0042023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044786 GO:0045182 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1902679 GO:1903506 GO:1903507 GO:1990837 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GCFC NTR2

Protein Analysis

937

Amino Acids

103.19

Weight (kDa)

5.89

Isoelectric Point (pI)

48.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007740)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08550
fragaria_vesca	FvH4_4g28100 FvH4_4g28100 FvH4_4g28100 FvH4_4g28100 FvH4_4g28100
malus_domestica	MD13G1046700.v1.1 MD16G1048400.v1.1
prunus_persica	Prupe.1G305200_v2.0.a1 Prupe.1G305200_v2.0.a1 Prupe.1G305200_v2.0.a1 Prupe.1G305200_v2.0.a1
pyrus_communis	pycom13g04090 pycom16g04230
rosa_chinensis	RchiOBHm_Chr4g0435851
rosa_laevigata	RLG00000006554
rosa_multiflora	Rmu_sc0002642.1_g000001
rosa_roxburghii	Rroxscaffold_5G00377030
rosa_rugosa	Rorug04G0290000
rosa_samantha	Rh4AG344300 Rh4BG353200 Rh4CG367600 Rh4DG347100
rosa_wichuraiana	Rw4G030080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1360
AccB1I	GGYRCC	1 cut(s)	2365
AccI	GTMKAC	2 cut(s)	186, 326
AccII	CGCG	2 cut(s)	797, 2302
AclWI	GGATC	2 cut(s)	2003, 2016
AcoI	YGGCCR	1 cut(s)	414
AcsI	RAATTY	3 cut(s)	1249, 1416, 1625
AcuI	CTGAAG	4 cut(s)	255, 774, 1501, 1631
AcyI	GRCGYC	1 cut(s)	579
AdeI	CACNNNGTG	1 cut(s)	2702
AfaI	GTAC	6 cut(s)	1074, 1706, 1744, 1827, 2200, 2299
AfeI	AGCGCT	1 cut(s)	381
AfiI	CCNNNNNNNGG	7 cut(s)	359, 511, 901, 1036, 1100, 2084, 2134
AflII	CTTAAG	2 cut(s)	1199, 2795
AflIII	ACRYGT	2 cut(s)	1947, 2300
AgsI	TTSAA	6 cut(s)	1270, 1400, 1904, 2731, 2752, 2791
AhlI	ACTAGT	1 cut(s)	1001
AjnI	CCWGG	1 cut(s)	411
AjuI	GAANNNNNNNTTGG	2 cut(s)	2723, 2755
AleI	CACNNNNGTG	1 cut(s)	2234
Alw21I	GWGCWC	4 cut(s)	393, 1009, 1963, 2652
Alw26I	GTCTC	6 cut(s)	260, 308, 1296, 1711, 1826, 2201
AlwI	GGATC	2 cut(s)	2003, 2016
AlwNI	CAGNNNCTG	1 cut(s)	2225
Ama87I	CYCGRG	4 cut(s)	504, 776, 1283, 1829
Aor51HI	AGCGCT	1 cut(s)	381
AoxI	GGCC	7 cut(s)	414, 457, 585, 594, 705, 1091, 1107
ApoI	RAATTY	3 cut(s)	1249, 1416, 1625
Asp700I	GAANNNNTTC	1 cut(s)	381
AspLEI	GCGC	4 cut(s)	203, 382, 749, 1153
AsuC2I	CCSGG	3 cut(s)	505, 506, 710
AsuHPI	GGTGA	2 cut(s)	2159, 2311
AsuII	TTCGAA	1 cut(s)	2518
AvaI	CYCGRG	4 cut(s)	504, 776, 1283, 1829
AvaII	GGWCC	5 cut(s)	1674, 2332, 2614, 2773, 2784
BaeGI	GKGCMC	1 cut(s)	1029
BalI	TGGCCA	1 cut(s)	416
BamHI	GGATCC	1 cut(s)	2008
BanI	GGYRCC	1 cut(s)	2365
BanII	GRGCYC	4 cut(s)	393, 626, 777, 2348
BarI	GAAGNNNNNNTAC	2 cut(s)	1028, 1060
BauI	CACGAG	2 cut(s)	403, 2202
BbsI	GAAGAC	3 cut(s)	915, 1248, 1919
Bbv12I	GWGCWC	4 cut(s)	393, 1009, 1963, 2652
BbvCI	CCTCAGC	1 cut(s)	176
BccI	CCATC	7 cut(s)	220, 595, 961, 968, 1471, 1755, 2078
BceAI	ACGGC	3 cut(s)	15, 698, 2604
BcgI	CGANNNNNNTGC	6 cut(s)	316, 350, 1316, 1350, 1820, 1854
BciT130I	CCWGG	1 cut(s)	413
BclI	TGATCA	1 cut(s)	643
BcnI	CCSGG	3 cut(s)	505, 506, 710
BcoDI	GTCTC	6 cut(s)	260, 308, 1296, 1711, 1826, 2201
BcuI	ACTAGT	1 cut(s)	1001
BfaI	CTAG	8 cut(s)	552, 981, 1002, 2262, 2465, 2687, 2769, 2781
BfoI	RGCGCY	3 cut(s)	204, 383, 750
BfrI	CTTAAG	2 cut(s)	1199, 2795
BfuAI	ACCTGC	1 cut(s)	1360
BglI	GCCNNNNNGGC	2 cut(s)	593, 1090
BmcAI	AGTACT	1 cut(s)	1827
Bme1390I	CCNGG	4 cut(s)	413, 505, 506, 710
Bme18I	GGWCC	5 cut(s)	1674, 2332, 2614, 2773, 2784
BmeT110I	CYCGRG	4 cut(s)	504, 776, 1283, 1829
BmrFI	CCNGG	4 cut(s)	413, 505, 506, 710
BmrI	ACTGGG	1 cut(s)	2666
BmuI	ACTGGG	1 cut(s)	2666
BpiI	GAAGAC	3 cut(s)	915, 1248, 1919
BplI	GAGNNNNNCTC	2 cut(s)	500, 532
BpmI	CTGGAG	3 cut(s)	377, 2012, 2690
Bpu10I	CCTNAGC	1 cut(s)	176
Bpu14I	TTCGAA	1 cut(s)	2518
BpuEI	CTTGAG	1 cut(s)	1827
BpuMI	CCSGG	3 cut(s)	505, 506, 710
Bsa29I	ATCGAT	1 cut(s)	2395
BsaHI	GRCGYC	1 cut(s)	579
BsaJI	CCNNGG	7 cut(s)	411, 504, 582, 708, 1677, 1728, 1863
BsaWI	WCCGGW	2 cut(s)	74, 2077
BsaXI	ACNNNNNCTCC	4 cut(s)	764, 794, 991, 1021
Bsc4I	CCNNNNNNNGG	7 cut(s)	359, 511, 901, 1036, 1100, 2084, 2134
Bse118I	RCCGGY	1 cut(s)	473
Bse1I	ACTGG	5 cut(s)	1610, 1819, 2459, 2640, 2661
Bse3DI	GCAATG	4 cut(s)	1059, 1512, 2150, 2523
BseBI	CCWGG	1 cut(s)	413
BseCI	ATCGAT	1 cut(s)	2395
BseDI	CCNNGG	7 cut(s)	411, 504, 582, 708, 1677, 1728, 1863
BseGI	GGATG	9 cut(s)	850, 871, 910, 972, 976, 1468, 1724, 1925, 2089
BseLI	CCNNNNNNNGG	7 cut(s)	359, 511, 901, 1036, 1100, 2084, 2134
BseMI	GCAATG	4 cut(s)	1059, 1512, 2150, 2523
BseMII	CTCAG	5 cut(s)	190, 700, 1149, 1578, 2209
BseNI	ACTGG	5 cut(s)	1610, 1819, 2459, 2640, 2661
BseRI	GAGGAG	6 cut(s)	121, 124, 164, 211, 421, 785
BseSI	GKGCMC	1 cut(s)	1029
BseYI	CCCAGC	1 cut(s)	2184
BsgI	GTGCAG	1 cut(s)	1584
Bsh1236I	CGCG	2 cut(s)	797, 2302
Bsh1285I	CGRYCG	1 cut(s)	895
BshFI	GGCC	7 cut(s)	416, 459, 587, 596, 707, 1093, 1109
BshNI	GGYRCC	1 cut(s)	2365
BshVI	ATCGAT	1 cut(s)	2395
BsiEI	CGRYCG	1 cut(s)	895
BsiHKAI	GWGCWC	4 cut(s)	393, 1009, 1963, 2652
BsiHKCI	CYCGRG	4 cut(s)	504, 776, 1283, 1829
BsiSI	CCGG	5 cut(s)	75, 474, 505, 710, 2078
BsiWI	CGTACG	1 cut(s)	2297
BslFI	GGGAC	6 cut(s)	581, 2111, 2201, 2318, 2627, 2786
BslI	CCNNNNNNNGG	7 cut(s)	359, 511, 901, 1036, 1100, 2084, 2134
BsmAI	GTCTC	6 cut(s)	260, 308, 1296, 1711, 1826, 2201
BsmBI	CGTCTC	2 cut(s)	260, 308
BsmFI	GGGAC	6 cut(s)	581, 2111, 2201, 2318, 2627, 2786
BsmI	GAATGC	3 cut(s)	2050, 2221, 2680
BsnI	GGCC	7 cut(s)	416, 459, 587, 596, 707, 1093, 1109
BsoBI	CYCGRG	4 cut(s)	504, 776, 1283, 1829
Bsp119I	TTCGAA	1 cut(s)	2518
Bsp1286I	GDGCHC	8 cut(s)	393, 626, 777, 1009, 1029, 1963, 2348, 2652
Bsp143I	GATC	3 cut(s)	643, 2008, 2131
Bsp19I	CCATGG	1 cut(s)	1728
Bsp68I	TCGCGA	1 cut(s)	797
BspANI	GGCC	7 cut(s)	416, 459, 587, 596, 707, 1093, 1109
BspCNI	CTCAG	5 cut(s)	189, 699, 1150, 1579, 2208
BspDI	ATCGAT	1 cut(s)	2395
BspFNI	CGCG	2 cut(s)	797, 2302
BspHI	TCATGA	2 cut(s)	1420, 2539
BspMI	ACCTGC	1 cut(s)	1360
BspPI	GGATC	2 cut(s)	2003, 2016
BspQI	GCTCTTC	3 cut(s)	525, 930, 1386
BspT104I	TTCGAA	1 cut(s)	2518
BspT107I	GGYRCC	1 cut(s)	2365
BspTI	CTTAAG	2 cut(s)	1199, 2795
BsrDI	GCAATG	4 cut(s)	1059, 1512, 2150, 2523
BsrFI	RCCGGY	1 cut(s)	473
BsrI	ACTGG	5 cut(s)	1610, 1819, 2459, 2640, 2661
BssAI	RCCGGY	1 cut(s)	473
BssECI	CCNNGG	7 cut(s)	411, 504, 582, 708, 1677, 1728, 1863
BssMI	GATC	3 cut(s)	643, 2008, 2131
BssNI	GRCGYC	1 cut(s)	579
BssSI	CACGAG	2 cut(s)	403, 2202
BssT1I	CCWWGG	1 cut(s)	1728
Bst2BI	CACGAG	2 cut(s)	403, 2202
Bst2UI	CCWGG	1 cut(s)	413
Bst4CI	ACNGT	8 cut(s)	100, 302, 896, 1722, 1742, 1790, 1937, 2332
BstACI	GRCGYC	1 cut(s)	579
BstAFI	CTTAAG	2 cut(s)	1199, 2795
BstAPI	GCANNNNNTGC	5 cut(s)	866, 1574, 1583, 2225, 2384
BstBI	TTCGAA	1 cut(s)	2518
BstC8I	GCNNGC	7 cut(s)	263, 418, 1082, 1155, 2048, 2475, 2596
BstDEI	CTNAG	8 cut(s)	176, 686, 1158, 1167, 1236, 1587, 1713, 2195
BstDSI	CCRYGG	1 cut(s)	1728
BstF5I	GGATG	9 cut(s)	850, 871, 910, 972, 976, 1468, 1724, 1925, 2089
BstFNI	CGCG	2 cut(s)	797, 2302
BstH2I	RGCGCY	3 cut(s)	204, 383, 750
BstHHI	GCGC	4 cut(s)	203, 382, 749, 1153
BstKTI	GATC	3 cut(s)	646, 2011, 2134
BstMAI	GTCTC	6 cut(s)	260, 308, 1296, 1711, 1826, 2201
BstMBI	GATC	3 cut(s)	643, 2008, 2131
BstMCI	CGRYCG	1 cut(s)	895
BstNI	CCWGG	1 cut(s)	413
BstNSI	RCATGY	1 cut(s)	1951
BstSCI	CCNGG	4 cut(s)	411, 503, 504, 708
BstSLI	GKGCMC	1 cut(s)	1029
BstUI	CGCG	2 cut(s)	797, 2302
BstV2I	GAAGAC	3 cut(s)	915, 1248, 1919
BstX2I	RGATCY	1 cut(s)	2008
BstXI	CCANNNNNNTGG	2 cut(s)	1735, 2236
BstYI	RGATCY	1 cut(s)	2008
Bsu15I	ATCGAT	1 cut(s)	2395
BsuRI	GGCC	7 cut(s)	416, 459, 587, 596, 707, 1093, 1109
BsuTUI	ATCGAT	1 cut(s)	2395
BtgI	CCRYGG	1 cut(s)	1728
BtgZI	GCGATG	1 cut(s)	780
BtsCI	GGATG	9 cut(s)	850, 871, 910, 972, 976, 1468, 1724, 1925, 2089
BtsI	GCAGTG	2 cut(s)	1540, 2179
BtsIMutI	CAGTG	7 cut(s)	1540, 1617, 1795, 1858, 2179, 2633, 2654
BtuMI	TCGCGA	1 cut(s)	797
BveI	ACCTGC	1 cut(s)	1360
Cac8I	GCNNGC	7 cut(s)	263, 418, 1082, 1155, 2048, 2475, 2596
CaiI	CAGNNNCTG	1 cut(s)	2225
CciI	TCATGA	2 cut(s)	1420, 2539
CfoI	GCGC	4 cut(s)	203, 382, 749, 1153
Cfr10I	RCCGGY	1 cut(s)	473
Cfr9I	CCCGGG	1 cut(s)	504
ClaI	ATCGAT	1 cut(s)	2395
CseI	GACGC	2 cut(s)	587, 2291
Csp6I	GTAC	6 cut(s)	1073, 1705, 1743, 1826, 2199, 2298
CspCI	CAANNNNNGTGG	2 cut(s)	2337, 2372
CviAII	CATG	9 cut(s)	743, 1211, 1222, 1421, 1729, 1948, 2340, 2513, 2540
CviQI	GTAC	6 cut(s)	1073, 1705, 1743, 1826, 2199, 2298
DdeI	CTNAG	8 cut(s)	176, 686, 1158, 1167, 1236, 1587, 1713, 2195
DpnI	GATC	3 cut(s)	645, 2010, 2133
DpnII	GATC	3 cut(s)	643, 2008, 2131
DraI	TTTAAA	1 cut(s)	453
DraIII	CACNNNGTG	1 cut(s)	2702
EaeI	YGGCCR	1 cut(s)	414
EciI	GGCGGA	2 cut(s)	14, 2244
Ecl136II	GAGCTC	1 cut(s)	391
Eco130I	CCWWGG	1 cut(s)	1728
Eco24I	GRGCYC	4 cut(s)	393, 626, 777, 2348
Eco47I	GGWCC	5 cut(s)	1674, 2332, 2614, 2773, 2784
Eco47III	AGCGCT	1 cut(s)	381
Eco53kI	GAGCTC	1 cut(s)	391
Eco57I	CTGAAG	4 cut(s)	255, 774, 1501, 1631
Eco88I	CYCGRG	4 cut(s)	504, 776, 1283, 1829
EcoICRI	GAGCTC	1 cut(s)	391
EcoO109I	RGGNCCY	3 cut(s)	457, 2773, 2784
EcoRII	CCWGG	1 cut(s)	411
EcoT14I	CCWWGG	1 cut(s)	1728
EcoT22I	ATGCAT	2 cut(s)	1804, 1927
EcoT38I	GRGCYC	4 cut(s)	393, 626, 777, 2348
ErhI	CCWWGG	1 cut(s)	1728
Esp3I	CGTCTC	2 cut(s)	260, 308
FaeI	CATG	9 cut(s)	746, 1214, 1225, 1424, 1732, 1951, 2343, 2516, 2543
FalI	AAGNNNNNCTT	4 cut(s)	366, 398, 2433, 2465
FaqI	GGGAC	6 cut(s)	581, 2111, 2201, 2318, 2627, 2786
FatI	CATG	9 cut(s)	742, 1210, 1221, 1420, 1728, 1947, 2339, 2512, 2539
FauI	CCCGC	1 cut(s)	1051
FauNDI	CATATG	1 cut(s)	1981
FbaI	TGATCA	1 cut(s)	643
FblI	GTMKAC	2 cut(s)	186, 326
FokI	GGATG	9 cut(s)	857, 878, 917, 979, 983, 1475, 1711, 1912, 2096
FriOI	GRGCYC	4 cut(s)	393, 626, 777, 2348
FspBI	CTAG	8 cut(s)	552, 981, 1002, 2262, 2465, 2687, 2769, 2781
GlaI	GCGC	4 cut(s)	202, 381, 748, 1152
GsaI	CCCAGC	1 cut(s)	2188
GsuI	CTGGAG	3 cut(s)	377, 2012, 2690
HaeII	RGCGCY	3 cut(s)	204, 383, 750
HaeIII	GGCC	7 cut(s)	416, 459, 587, 596, 707, 1093, 1109
HapII	CCGG	5 cut(s)	75, 474, 505, 710, 2078
HgaI	GACGC	2 cut(s)	587, 2291
HhaI	GCGC	4 cut(s)	203, 382, 749, 1153
Hin1I	GRCGYC	1 cut(s)	579
Hin1II	CATG	9 cut(s)	746, 1214, 1225, 1424, 1732, 1951, 2343, 2516, 2543
Hin6I	GCGC	4 cut(s)	201, 380, 747, 1151
HinP1I	GCGC	4 cut(s)	201, 380, 747, 1151
HincII	GTYRAC	3 cut(s)	187, 327, 2746
HindII	GTYRAC	3 cut(s)	187, 327, 2746
HindIII	AAGCTT	4 cut(s)	1173, 1196, 1331, 2471
HinfI	GANTC	8 cut(s)	515, 664, 728, 792, 1709, 1766, 2397, 2665
HpaII	CCGG	5 cut(s)	75, 474, 505, 710, 2078
HphI	GGTGA	2 cut(s)	2159, 2311
Hpy166II	GTNNAC	7 cut(s)	187, 327, 1323, 1738, 2179, 2201, 2746
Hpy188I	TCNGA	7 cut(s)	436, 487, 520, 689, 1020, 1650, 1678
Hpy8I	GTNNAC	7 cut(s)	187, 327, 1323, 1738, 2179, 2201, 2746
Hpy99I	CGWCG	8 cut(s)	41, 44, 62, 91, 188, 191, 194, 581
HpyCH4III	ACNGT	8 cut(s)	100, 302, 896, 1722, 1742, 1790, 1937, 2332
HpyCH4IV	ACGT	4 cut(s)	345, 491, 1429, 1654
HpyF3I	CTNAG	8 cut(s)	176, 686, 1158, 1167, 1236, 1587, 1713, 2195
HpySE526I	ACGT	4 cut(s)	345, 491, 1429, 1654
Hsp92I	GRCGYC	1 cut(s)	579
Hsp92II	CATG	9 cut(s)	746, 1214, 1225, 1424, 1732, 1951, 2343, 2516, 2543
HspAI	GCGC	4 cut(s)	201, 380, 747, 1151
Ksp22I	TGATCA	1 cut(s)	643
Kzo9I	GATC	3 cut(s)	643, 2008, 2131
LguI	GCTCTTC	3 cut(s)	525, 930, 1386
MaeI	CTAG	8 cut(s)	552, 981, 1002, 2262, 2465, 2687, 2769, 2781
MaeII	ACGT	4 cut(s)	345, 491, 1429, 1654
MaeIII	GTNAC	8 cut(s)	1227, 1337, 1358, 1784, 2239, 2317, 2605, 2692
MalI	GATC	3 cut(s)	645, 2010, 2133
MboI	GATC	3 cut(s)	643, 2008, 2131
MflI	RGATCY	1 cut(s)	2008
MhlI	GDGCHC	8 cut(s)	393, 626, 777, 1009, 1029, 1963, 2348, 2652
MlsI	TGGCCA	1 cut(s)	416
MluCI	AATT	8 cut(s)	606, 1249, 1416, 1545, 1616, 1625, 2547, 2706
MluI	ACGCGT	1 cut(s)	2300
MluNI	TGGCCA	1 cut(s)	416
MlyI	GAGTC	2 cut(s)	509, 2659
MmeI	TCCRAC	4 cut(s)	366, 373, 492, 543
Mox20I	TGGCCA	1 cut(s)	416
Mph1103I	ATGCAT	2 cut(s)	1804, 1927
MroXI	GAANNNNTTC	1 cut(s)	381
MscI	TGGCCA	1 cut(s)	416
MseI	TTAA	6 cut(s)	452, 465, 1200, 1374, 1955, 2796
MslI	CAYNNNNRTG	2 cut(s)	1733, 2234
Msp20I	TGGCCA	1 cut(s)	416
MspA1I	CMGCKG	4 cut(s)	863, 1493, 1553, 2363
MspCI	CTTAAG	2 cut(s)	1199, 2795
MspI	CCGG	5 cut(s)	75, 474, 505, 710, 2078
MspR9I	CCNGG	4 cut(s)	413, 505, 506, 710
Mva1269I	GAATGC	3 cut(s)	2050, 2221, 2680
MvaI	CCWGG	1 cut(s)	413
MvnI	CGCG	2 cut(s)	797, 2302
NciI	CCSGG	3 cut(s)	505, 506, 710
NcoI	CCATGG	1 cut(s)	1728
NdeI	CATATG	1 cut(s)	1981
NdeII	GATC	3 cut(s)	643, 2008, 2131
NlaIII	CATG	9 cut(s)	746, 1214, 1225, 1424, 1732, 1951, 2343, 2516, 2543
NmeAIII	GCCGAG	3 cut(s)	237, 607, 1888
NmuCI	GTSAC	6 cut(s)	1227, 1337, 1784, 2317, 2605, 2692
NruI	TCGCGA	1 cut(s)	797
NsiI	ATGCAT	2 cut(s)	1804, 1927
NspI	RCATGY	1 cut(s)	1951
NspV	TTCGAA	1 cut(s)	2518
OliI	CACNNNNGTG	1 cut(s)	2234
PaeR7I	CTCGAG	2 cut(s)	1283, 1829
PagI	TCATGA	2 cut(s)	1420, 2539
PciI	ACATGT	1 cut(s)	1947
PciSI	GCTCTTC	3 cut(s)	525, 930, 1386
PcsI	WCGNNNNNNNCGW	4 cut(s)	45, 54, 66, 189
PctI	GAATGC	3 cut(s)	2050, 2221, 2680
PdmI	GAANNNNTTC	1 cut(s)	381
PfeI	GAWTC	6 cut(s)	664, 728, 792, 1709, 1766, 2397
Pfl23II	CGTACG	1 cut(s)	2297
PleI	GAGTC	2 cut(s)	509, 2659
PpsI	GAGTC	2 cut(s)	509, 2659
PpuMI	RGGWCCY	2 cut(s)	2773, 2784
PscI	ACATGT	1 cut(s)	1947
Psp124BI	GAGCTC	1 cut(s)	393
Psp5II	RGGWCCY	2 cut(s)	2773, 2784
Psp6I	CCWGG	1 cut(s)	411
PspFI	CCCAGC	1 cut(s)	2184
PspGI	CCWGG	1 cut(s)	411
PspLI	CGTACG	1 cut(s)	2297
PspPPI	RGGWCCY	2 cut(s)	2773, 2784
PstNI	CAGNNNCTG	1 cut(s)	2225
PsuI	RGATCY	1 cut(s)	2008
PvuII	CAGCTG	2 cut(s)	1493, 1553
RruI	TCGCGA	1 cut(s)	797
RsaI	GTAC	6 cut(s)	1074, 1706, 1744, 1827, 2200, 2299
RsaNI	GTAC	6 cut(s)	1073, 1705, 1743, 1826, 2199, 2298
RseI	CAYNNNNRTG	2 cut(s)	1733, 2234
SacI	GAGCTC	1 cut(s)	393
SalI	GTCGAC	2 cut(s)	185, 325
SapI	GCTCTTC	3 cut(s)	525, 930, 1386
SaqAI	TTAA	6 cut(s)	452, 465, 1200, 1374, 1955, 2796
Sau3AI	GATC	3 cut(s)	643, 2008, 2131
ScaI	AGTACT	1 cut(s)	1827
SchI	GAGTC	2 cut(s)	509, 2659
ScrFI	CCNGG	4 cut(s)	413, 505, 506, 710
SduI	GDGCHC	8 cut(s)	393, 626, 777, 1009, 1029, 1963, 2348, 2652
SfiI	GGCCNNNNNGGCC	1 cut(s)	593
Sfr274I	CTCGAG	2 cut(s)	1283, 1829
SfuI	TTCGAA	1 cut(s)	2518
SgrDI	CGTCGACG	1 cut(s)	185
SinI	GGWCC	5 cut(s)	1674, 2332, 2614, 2773, 2784
SlaI	CTCGAG	2 cut(s)	1283, 1829
SmaI	CCCGGG	1 cut(s)	506
SmiMI	CAYNNNNRTG	2 cut(s)	1733, 2234
SmlI	CTYRAG	5 cut(s)	1199, 1283, 1829, 1842, 2795
SmoI	CTYRAG	5 cut(s)	1199, 1283, 1829, 1842, 2795
SpeI	ACTAGT	1 cut(s)	1001
Sse9I	AATT	8 cut(s)	606, 1249, 1416, 1545, 1616, 1625, 2547, 2706
SspI	AATATT	2 cut(s)	1273, 1871
SspMI	CTAG	8 cut(s)	552, 981, 1002, 2262, 2465, 2687, 2769, 2781
SstI	GAGCTC	1 cut(s)	393
StyD4I	CCNGG	4 cut(s)	411, 503, 504, 708
StyI	CCWWGG	1 cut(s)	1728
TaaI	ACNGT	8 cut(s)	100, 302, 896, 1722, 1742, 1790, 1937, 2332
TaiI	ACGT	4 cut(s)	348, 494, 1432, 1657
TasI	AATT	8 cut(s)	606, 1249, 1416, 1545, 1616, 1625, 2547, 2706
TatI	WGTACW	3 cut(s)	1072, 1825, 2198
TauI	GCSGC	4 cut(s)	30, 206, 704, 707
TfiI	GAWTC	6 cut(s)	664, 728, 792, 1709, 1766, 2397
Tru1I	TTAA	6 cut(s)	452, 465, 1200, 1374, 1955, 2796
Tru9I	TTAA	6 cut(s)	452, 465, 1200, 1374, 1955, 2796
TscAI	CASTG	7 cut(s)	1540, 1617, 1795, 1858, 2186, 2640, 2661
TseFI	GTSAC	6 cut(s)	1227, 1337, 1784, 2317, 2605, 2692
Tsp45I	GTSAC	6 cut(s)	1227, 1337, 1784, 2317, 2605, 2692
TspGWI	ACGGA	2 cut(s)	2006, 2395
TspMI	CCCGGG	1 cut(s)	504
TspRI	CASTG	7 cut(s)	1540, 1617, 1795, 1858, 2186, 2640, 2661
Vha464I	CTTAAG	2 cut(s)	1199, 2795
VpaK11BI	GGWCC	5 cut(s)	1674, 2332, 2614, 2773, 2784
XapI	RAATTY	3 cut(s)	1249, 1416, 1625
XbaI	TCTAGA	1 cut(s)	2464
XceI	RCATGY	1 cut(s)	1951
XcmI	CCANNNNNNNNNTGG	2 cut(s)	356, 1882
XhoI	CTCGAG	2 cut(s)	1283, 1829
XmaI	CCCGGG	1 cut(s)	504
XmiI	GTMKAC	2 cut(s)	186, 326
XmnI	GAANNNNTTC	1 cut(s)	381
XspI	CTAG	8 cut(s)	552, 981, 1002, 2262, 2465, 2687, 2769, 2781
ZrmI	AGTACT	1 cut(s)	1827
Zsp2I	ATGCAT	2 cut(s)	1804, 1927

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.