Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0007740

Physical Location & Seq

Genomic Coordinates Forward (+)

2621684 .. 2627603

Gene Structure 5920 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g04230.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2997 bp

ATGGATGAGCGGCGACGATCAAGAGCCCAACTCAGAGGCAAAGCTTCCGTCTTGGAAGACCGCCGCAGACTCGCTTTTTCTCTCTCTCGCGCTCCGCTTCGTCTTGTCAACTCGGCCAATTCCTTTCCCAATTTTCCCCAAATTTCCCACTCTCTTCTCCGTTCGAATACTGCAATCCCTAAACCCGCTACCGCCACCATGAGCAGCAGAGCCAGAAACTTCCGCCGCCGCGCCGACGACGAAGATGATCAAAACGACGACGCAACCCCCTCAACGGCAACCACCGTCAAATCCTTGTCAAAACCCTCTTCCGCATCCTCCTCAAAGCCTAAGAAGCCACAGAATCAAGGCCCGAAGCTCCTCAGCTTTGTCGACGACGAAGAAAACGCCGCCGCGCCGTCCCGCTCCGCGCCATCTTCCAAACGCGATAAGCCCTCTTCTCGTCTGGGCAAGCCCTCTTCAGCTCATAAGTTGACGGCTCTCAAAGACCGTCTCGCTCATTCGTCTTCCGTATCGACTTCTCTGCCTTCCAACGTTCAGCCCCAAGCCGGAACCTACACGAAAGAAGCGCTCCGTGAGCTGCAGAAGAACACGCGAACCCTAGCCAGCTCCCGACCCTCCTCCGAACCCACCATTGTTCTGAAGGGCCTTATCAAACCCACGGACTCAATCTCCGATACGCTGAGAGAAGCCCGGGAGTTGGATTCTGATTCCGACGAGAAGCATGAGAAGGAAAGGGGCAATTTGTTTAGGAGGGACAAGGACGAAGCAGAGGCCCAATTGGCCTCGATGAGAATTGACAAGGGCAAGAGGTCACCTGGGTTGTTTCCTGATCAAGCCACCATAGATGCCATTCGGGCCAAGAGGGAACGGCTCAGGAAATCAAGGGCAGCGGCTCCGGACTTTATCTCATTGGATTCAGGGAGTAATCATGGCGCTGCAGAAGGGTTGAGCGATGAGGAGCCAGAGTTTCGAGGTCGAATTGCAATGTTTGGGGATAAGATGGACGGTTCTAAAAAGGGGGTTTTTGAGGATGTTGATGATAGGGTAGTGGATGCTGGATTGAGGCAGGAAAGCGTTGAACGGGATGAGGAAGAGGATGAGGATGAGGAAGATAAGATGTGGGAAGAAGAGCAGTTTAGGAAAGGGTTGGGGAAGAGGGTGGATGATGGGGTGGTCAGCACTAGTGCTCCTGCAATTCCGAGTGTGCCCCAACCAAAGACTACTTACTCTGCAATGACGGGTTATGGTTTGTCAGAGAGTATGCCTCTCGGGACAAGTATAGGAGGGGCAATTGGAGCATCACAAGGTTCAAATGTGATGTCCATAAAGGAGCAGGCGGACATTGCTAGAAAAGCTTTGGAAGAAAATTTCACGAAGCTTAAGGCAAGTCATGGAAGAACCATGTTGTCACTAACTAAGACTGACGAAAATTTGTCGGCCTCGCTGTTGAATATTACTGCTCTCGAGAAGTCTCTGTCTGCTGCTGATGAGAAGTACCAGTTCATGCAAAAGCTTCGCGATTTTGTCTCTGCCATATGTGACTTTTTGCAGGTTAAAGCTCCCTATATAGAAGAGCTTGAAGCGGAAATGCAGAAAGTTCATGAACAACGTGCCTCATCTACTATGGAAAGGAGAAGTGCCGATGATGATGAAATGATGGAAGTAGAAGCAGCTGTAAAAGCAGCAATGTCTATCATCAGTAAAGAAGGTAGCAGTGCTGAAATAATTGCAGCTGCTAAAAGTGCAGCACAAGCTGCATCTACTGCTGTGAGAGAACAAACTAATCTACCAGTGAAGTTAGATGAATTTGGTAGAGATATGAACCTTAAGAAACGTATGGATATGAAAGGGAGGTATGAGGCTCGACAACACAGGAAAAGAAGGTGTGAATCTAAGAGACTGTCAGCCATGGATGTGGACAGTTCCCATCGAACAATAGAAGGAGAATCAAGCACCGATGAGAGTGACAGCGAGAGTCAAGTATACCACAGACACCGCCAGTTGGTGCTCGACACTGCAGGTAAAGTATTCGATGATGCAGCAGAGGAATATTCTCAACTTTCAGTGATCAAAGGAAGGTTTGAAGACTGGAAGAGAGAGTATGCATCAAGCTACCGTGATGCTTACATGTCTTTAAGTGTTCCTACTATCTTCTCTCCATATGTGAGACTGGAGCTTTTGAAGTGGGACCCCCTCCGTGATAAAACAGATTTTCTAAACATGAACTGGCATTCATTGTTAATGGACTATGGTTTATTTGAGGATGGAAATGATTTGGCATCAGATGATGCTGATGCTAACCTTGTTCCTGATCTGGTGGAAAAGGTTGCTTTACCCATTTTGCATCACCAAGTTGCTCACTGTTGGAACATTCTCAGTACGAGAGAGACCAAGAATGCAGTTGCTGCCACAAGTTTGGTAACAGATTATGTTCCACCTTCAAGTGAGGCTCTTGCTGATTTATTAGTTGCTGTTCGCACCCGTCTGGCTGATGCTGTCACTAATCTTACGGTCCCAACATGGAGCCCACTTGTATTGACAGCAGTGCCAGATGCAGCACGGCTGGCAGCATATCGATTCGGTATGTCTGTTCGTTTGATGAAAAATATCTGCTTGTGGAAAGAAATCCTTGCTTCTCCCATTTTAGAGAAGCTTGCCATTGAGGAGCTGTTGTGTGGTAAAGTTCTACCTCATGTTCGAAGCATTGCTGCAAATGTTCATGATGCTGTTACAAGAACTGAAAGAATTGTTGCTTCTCTATCTGGGGTGTGGGCAGGCTCAAATGTCACAGGGGACAGCAGCCGTAAGCTGCAACCGCTGGTGGATTACGTGCTCTCGTTGGGTAGGACTCTGGAGAAGAAGCATTTGCTTGGCGCGACACAAAGTGAAACTGGTGGACTTGCCCGTAGATTAAAGAAAATGCTGGTTGATCTGAACCAGTATGACAAGGCTAGGGACATAGCAAGGACCTTCAACCTTAAGGAGGCATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000122 GO:0000375 GO:0000377 GO:0000398 GO:0000976 GO:0000977 GO:0000978 GO:0000981 GO:0000982 GO:0000987 GO:0001012 GO:0001067 GO:0001078 GO:0001227 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006355 GO:0006357 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0008380 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0016070 GO:0016071 GO:0017148 GO:0019219 GO:0019222 GO:0022402 GO:0030371 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032268 GO:0032269 GO:0034248 GO:0034249 GO:0034641 GO:0034645 GO:0042023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044786 GO:0045182 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1902679 GO:1903506 GO:1903507 GO:1990837 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GCFC NTR2

Protein Analysis

999

Amino Acids

110.51

Weight (kDa)

6.59

Isoelectric Point (pI)

48.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007740)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08550
fragaria_vesca	FvH4_4g28100 FvH4_4g28100 FvH4_4g28100 FvH4_4g28100 FvH4_4g28100
malus_domestica	MD13G1046700.v1.1 MD16G1048400.v1.1
prunus_persica	Prupe.1G305200_v2.0.a1 Prupe.1G305200_v2.0.a1 Prupe.1G305200_v2.0.a1 Prupe.1G305200_v2.0.a1
pyrus_communis	pycom13g04090 pycom16g04230
rosa_chinensis	RchiOBHm_Chr4g0435851
rosa_laevigata	RLG00000006554
rosa_multiflora	Rmu_sc0002642.1_g000001
rosa_roxburghii	Rroxscaffold_5G00377030
rosa_rugosa	Rorug04G0290000
rosa_samantha	Rh4AG344300 Rh4BG353200 Rh4CG367600 Rh4DG347100
rosa_wichuraiana	Rw4G030080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1543, 2012
AccBSI	CCGCTC	2 cut(s)	10, 405
AccI	GTMKAC	2 cut(s)	372, 1986
AccII	CGCG	8 cut(s)	90, 231, 395, 410, 426, 595, 1521, 2879
AccIII	TCCGGA	1 cut(s)	898
AclI	AACGTT	1 cut(s)	534
AcoI	YGGCCR	1 cut(s)	114
AcsI	RAATTY	4 cut(s)	141, 1369, 1432, 1808
AcuI	CTGAAG	2 cut(s)	444, 662
AdeI	CACNNNGTG	1 cut(s)	2888
AfaI	GTAC	2 cut(s)	1499, 2383
AfeI	AGCGCT	1 cut(s)	570
AfiI	CCNNNNNNNGG	5 cut(s)	274, 548, 700, 2005, 2986
AflII	CTTAAG	3 cut(s)	1382, 1829, 2981
AflIII	ACRYGT	1 cut(s)	2130
AgsI	TTSAA	8 cut(s)	1082, 1314, 1453, 1583, 2087, 2185, 2445, 2977
AhlI	ACTAGT	1 cut(s)	1184
AjnI	CCWGG	1 cut(s)	817
Alw21I	GWGCWC	3 cut(s)	1192, 2013, 2838
Alw26I	GTCTC	6 cut(s)	497, 1479, 1534, 1894, 2164, 2384
AlwNI	CAGNNNCTG	1 cut(s)	2408
Ama87I	CYCGRG	3 cut(s)	693, 1271, 1466
Aor13HI	TCCGGA	1 cut(s)	898
Aor51HI	AGCGCT	1 cut(s)	570
AoxI	GGCC	7 cut(s)	114, 349, 646, 774, 783, 858, 1440
ApoI	RAATTY	4 cut(s)	141, 1369, 1432, 1808
ArsI	GACNNNNNNTTYG	4 cut(s)	33, 65, 1307, 1339
AspLEI	GCGC	7 cut(s)	92, 233, 397, 412, 571, 938, 2879
AspS9I	GGNCC	7 cut(s)	350, 646, 775, 858, 2191, 2515, 2970
AsuC2I	CCSGG	2 cut(s)	694, 695
AsuHPI	GGTGA	2 cut(s)	807, 2342
AsuII	TTCGAA	2 cut(s)	164, 2701
AvaI	CYCGRG	3 cut(s)	693, 1271, 1466
AvaII	GGWCC	3 cut(s)	2191, 2515, 2970
BaeGI	GKGCMC	1 cut(s)	1212
BanII	GRGCYC	2 cut(s)	28, 2531
BbsI	GAAGAC	3 cut(s)	63, 498, 2094
Bbv12I	GWGCWC	3 cut(s)	1192, 2013, 2838
BbvCI	CCTCAGC	1 cut(s)	362
BccI	CCATC	6 cut(s)	421, 997, 1163, 1654, 1938, 2261
BceAI	ACGGC	6 cut(s)	291, 382, 492, 887, 2579, 2790
BcgI	CGANNNNNNTGC	4 cut(s)	505, 539, 1499, 1533
BciT130I	CCWGG	1 cut(s)	819
BclI	TGATCA	3 cut(s)	247, 832, 2070
BcnI	CCSGG	2 cut(s)	694, 695
BcoDI	GTCTC	6 cut(s)	497, 1479, 1534, 1894, 2164, 2384
BcuI	ACTAGT	1 cut(s)	1184
BfaI	CTAG	4 cut(s)	602, 1185, 1350, 2955
BfmI	CTRYAG	3 cut(s)	581, 939, 2019
BfoI	RGCGCY	2 cut(s)	572, 939
BfrI	CTTAAG	3 cut(s)	1382, 1829, 2981
BfuAI	ACCTGC	2 cut(s)	1543, 2012
BglI	GCCNNNNNGGC	2 cut(s)	782, 857
Bme1390I	CCNGG	3 cut(s)	694, 695, 819
Bme18I	GGWCC	3 cut(s)	2191, 2515, 2970
BmeT110I	CYCGRG	3 cut(s)	693, 1271, 1466
BmgT120I	GGNCC	7 cut(s)	350, 646, 775, 858, 2191, 2515, 2970
BmiI	GGNNCC	7 cut(s)	553, 897, 963, 2192, 2193, 2517, 2528
BmrFI	CCNGG	3 cut(s)	694, 695, 819
BpiI	GAAGAC	3 cut(s)	63, 498, 2094
BplI	GAGNNNNNCTC	4 cut(s)	15, 47, 1252, 1284
BpmI	CTGGAG	2 cut(s)	2195, 2876
Bpu10I	CCTNAGC	2 cut(s)	362, 875
Bpu14I	TTCGAA	2 cut(s)	164, 2701
BpuMI	CCSGG	2 cut(s)	694, 695
Bsa29I	ATCGAT	1 cut(s)	2578
BsaAI	YACGTR	1 cut(s)	2833
BsaI	GGTCTC	1 cut(s)	2384
BsaJI	CCNNGG	4 cut(s)	660, 693, 818, 1911
BsaWI	WCCGGW	1 cut(s)	898
BsaXI	ACNNNNNCTCC	9 cut(s)	656, 686, 953, 983, 1174, 1204, 2660, 2690, 2978
Bsc4I	CCNNNNNNNGG	5 cut(s)	274, 548, 700, 2005, 2986
Bse1I	ACTGG	8 cut(s)	1501, 1793, 2002, 2096, 2178, 2234, 2899, 2941
Bse3DI	GCAATG	5 cut(s)	993, 1242, 1344, 1695, 2706
BseAI	TCCGGA	1 cut(s)	898
BseBI	CCWGG	1 cut(s)	819
BseCI	ATCGAT	1 cut(s)	2578
BseDI	CCNNGG	4 cut(s)	660, 693, 818, 1911
BseLI	CCNNNNNNNGG	5 cut(s)	274, 548, 700, 2005, 2986
BseMI	GCAATG	5 cut(s)	993, 1242, 1344, 1695, 2706
BseMII	CTCAG	5 cut(s)	46, 376, 674, 889, 2392
BseNI	ACTGG	8 cut(s)	1501, 1793, 2002, 2096, 2178, 2234, 2899, 2941
BseRI	GAGGAG	5 cut(s)	310, 350, 610, 974, 2681
BseSI	GKGCMC	1 cut(s)	1212
BsgI	GTGCAG	1 cut(s)	1767
Bsh1236I	CGCG	8 cut(s)	90, 231, 395, 410, 426, 595, 1521, 2879
BshFI	GGCC	7 cut(s)	116, 351, 648, 776, 785, 860, 1442
BshVI	ATCGAT	1 cut(s)	2578
BsiHKAI	GWGCWC	3 cut(s)	1192, 2013, 2838
BsiHKCI	CYCGRG	3 cut(s)	693, 1271, 1466
BsiSI	CCGG	3 cut(s)	549, 694, 899
BslFI	GGGAC	7 cut(s)	385, 770, 1288, 2204, 2501, 2810, 2972
BslI	CCNNNNNNNGG	5 cut(s)	274, 548, 700, 2005, 2986
BsmAI	GTCTC	6 cut(s)	497, 1479, 1534, 1894, 2164, 2384
BsmBI	CGTCTC	1 cut(s)	497
BsmFI	GGGAC	7 cut(s)	385, 770, 1288, 2204, 2501, 2810, 2972
BsmI	GAATGC	2 cut(s)	2233, 2404
BsnI	GGCC	7 cut(s)	116, 351, 648, 776, 785, 860, 1442
Bso31I	GGTCTC	1 cut(s)	2384
BsoBI	CYCGRG	3 cut(s)	693, 1271, 1466
Bsp119I	TTCGAA	2 cut(s)	164, 2701
Bsp1286I	GDGCHC	6 cut(s)	28, 1192, 1212, 2013, 2531, 2838
Bsp13I	TCCGGA	1 cut(s)	898
Bsp143I	GATC	6 cut(s)	17, 247, 832, 2070, 2314, 2932
Bsp19I	CCATGG	1 cut(s)	1911
Bsp68I	TCGCGA	1 cut(s)	1521
BspANI	GGCC	7 cut(s)	116, 351, 648, 776, 785, 860, 1442
BspCNI	CTCAG	5 cut(s)	45, 375, 675, 888, 2391
BspDI	ATCGAT	1 cut(s)	2578
BspEI	TCCGGA	1 cut(s)	898
BspFNI	CGCG	8 cut(s)	90, 231, 395, 410, 426, 595, 1521, 2879
BspHI	TCATGA	2 cut(s)	1603, 2722
BspLI	GGNNCC	7 cut(s)	553, 897, 963, 2192, 2193, 2517, 2528
BspMAI	CTGCAG	3 cut(s)	585, 943, 2023
BspMI	ACCTGC	2 cut(s)	1543, 2012
BspQI	GCTCTTC	2 cut(s)	1125, 1569
BspT104I	TTCGAA	2 cut(s)	164, 2701
BspTI	CTTAAG	3 cut(s)	1382, 1829, 2981
BspTNI	GGTCTC	1 cut(s)	2384
BsrBI	CCGCTC	2 cut(s)	10, 405
BsrDI	GCAATG	5 cut(s)	993, 1242, 1344, 1695, 2706
BsrI	ACTGG	8 cut(s)	1501, 1793, 2002, 2096, 2178, 2234, 2899, 2941
BssECI	CCNNGG	4 cut(s)	660, 693, 818, 1911
BssMI	GATC	6 cut(s)	17, 247, 832, 2070, 2314, 2932
BssNAI	GTATAC	1 cut(s)	1987
BssT1I	CCWWGG	1 cut(s)	1911
Bst1107I	GTATAC	1 cut(s)	1987
Bst2UI	CCWGG	1 cut(s)	819
Bst4CI	ACNGT	8 cut(s)	286, 491, 1010, 1905, 1925, 2120, 2366, 2515
Bst6I	CTCTTC	9 cut(s)	159, 313, 442, 463, 1089, 1125, 1151, 1569, 2090
BstAFI	CTTAAG	3 cut(s)	1382, 1829, 2981
BstAPI	GCANNNNNTGC	3 cut(s)	1757, 1766, 2408
BstBAI	YACGTR	1 cut(s)	2833
BstBI	TTCGAA	2 cut(s)	164, 2701
BstC8I	GCNNGC	6 cut(s)	452, 607, 1338, 2568, 2658, 2779
BstDEI	CTNAG	8 cut(s)	32, 330, 362, 683, 875, 1419, 1896, 2378
BstDSI	CCRYGG	2 cut(s)	660, 1911
BstEII	GGTNACC	1 cut(s)	813
BstENI	CCTNNNNNAGG	1 cut(s)	2984
BstFNI	CGCG	8 cut(s)	90, 231, 395, 410, 426, 595, 1521, 2879
BstH2I	RGCGCY	2 cut(s)	572, 939
BstHHI	GCGC	7 cut(s)	92, 233, 397, 412, 571, 938, 2879
BstKTI	GATC	6 cut(s)	20, 250, 835, 2073, 2317, 2935
BstMAI	GTCTC	6 cut(s)	497, 1479, 1534, 1894, 2164, 2384
BstMBI	GATC	6 cut(s)	17, 247, 832, 2070, 2314, 2932
BstNI	CCWGG	1 cut(s)	819
BstNSI	RCATGY	1 cut(s)	2134
BstPI	GGTNACC	1 cut(s)	813
BstSCI	CCNGG	3 cut(s)	692, 693, 817
BstSFI	CTRYAG	3 cut(s)	581, 939, 2019
BstSLI	GKGCMC	1 cut(s)	1212
BstUI	CGCG	8 cut(s)	90, 231, 395, 410, 426, 595, 1521, 2879
BstV2I	GAAGAC	3 cut(s)	63, 498, 2094
BstXI	CCANNNNNNTGG	2 cut(s)	1918, 2419
BstZ17I	GTATAC	1 cut(s)	1987
Bsu15I	ATCGAT	1 cut(s)	2578
BsuRI	GGCC	7 cut(s)	116, 351, 648, 776, 785, 860, 1442
BsuTUI	ATCGAT	1 cut(s)	2578
BtgI	CCRYGG	2 cut(s)	660, 1911
BtgZI	GCGATG	1 cut(s)	969
BtsI	GCAGTG	3 cut(s)	1723, 2016, 2553
BtsIMutI	CAGTG	6 cut(s)	1723, 1800, 2016, 2073, 2362, 2553
BtuMI	TCGCGA	1 cut(s)	1521
BveI	ACCTGC	2 cut(s)	1543, 2012
Cac8I	GCNNGC	6 cut(s)	452, 607, 1338, 2568, 2658, 2779
CaiI	CAGNNNCTG	1 cut(s)	2408
CciI	TCATGA	2 cut(s)	1603, 2722
CfoI	GCGC	7 cut(s)	92, 233, 397, 412, 571, 938, 2879
Cfr13I	GGNCC	7 cut(s)	350, 646, 775, 858, 2191, 2515, 2970
Cfr9I	CCCGGG	1 cut(s)	693
ClaI	ATCGAT	1 cut(s)	2578
CseI	GACGC	1 cut(s)	269
Csp6I	GTAC	2 cut(s)	1498, 2382
CspCI	CAANNNNNGTGG	2 cut(s)	2520, 2555
CviQI	GTAC	2 cut(s)	1498, 2382
DdeI	CTNAG	8 cut(s)	32, 330, 362, 683, 875, 1419, 1896, 2378
DpnI	GATC	6 cut(s)	19, 249, 834, 2072, 2316, 2934
DpnII	GATC	6 cut(s)	17, 247, 832, 2070, 2314, 2932
DraIII	CACNNNGTG	1 cut(s)	2888
EaeI	YGGCCR	1 cut(s)	114
Eam1104I	CTCTTC	9 cut(s)	159, 313, 442, 463, 1089, 1125, 1151, 1569, 2090
EarI	CTCTTC	9 cut(s)	159, 313, 442, 463, 1089, 1125, 1151, 1569, 2090
EciI	GGCGGA	2 cut(s)	212, 1355
Eco130I	CCWWGG	1 cut(s)	1911
Eco24I	GRGCYC	2 cut(s)	28, 2531
Eco31I	GGTCTC	1 cut(s)	2384
Eco47I	GGWCC	3 cut(s)	2191, 2515, 2970
Eco47III	AGCGCT	1 cut(s)	570
Eco57I	CTGAAG	2 cut(s)	444, 662
Eco88I	CYCGRG	3 cut(s)	693, 1271, 1466
Eco91I	GGTNACC	1 cut(s)	813
EcoNI	CCTNNNNNAGG	1 cut(s)	2984
EcoO109I	RGGNCCY	3 cut(s)	646, 2191, 2970
EcoO65I	GGTNACC	1 cut(s)	813
EcoRII	CCWGG	1 cut(s)	817
EcoT14I	CCWWGG	1 cut(s)	1911
EcoT22I	ATGCAT	1 cut(s)	2110
EcoT38I	GRGCYC	2 cut(s)	28, 2531
ErhI	CCWWGG	1 cut(s)	1911
Esp3I	CGTCTC	1 cut(s)	497
FalI	AAGNNNNNCTT	2 cut(s)	2616, 2648
FaqI	GGGAC	7 cut(s)	385, 770, 1288, 2204, 2501, 2810, 2972
FauI	CCCGC	2 cut(s)	193, 410
FauNDI	CATATG	2 cut(s)	1538, 2164
FbaI	TGATCA	3 cut(s)	247, 832, 2070
FblI	GTMKAC	2 cut(s)	372, 1986
FriOI	GRGCYC	2 cut(s)	28, 2531
FspBI	CTAG	4 cut(s)	602, 1185, 1350, 2955
GlaI	GCGC	7 cut(s)	91, 232, 396, 411, 570, 937, 2878
GsuI	CTGGAG	2 cut(s)	2195, 2876
HaeII	RGCGCY	2 cut(s)	572, 939
HaeIII	GGCC	7 cut(s)	116, 351, 648, 776, 785, 860, 1442
HapII	CCGG	3 cut(s)	549, 694, 899
HgaI	GACGC	1 cut(s)	269
HhaI	GCGC	7 cut(s)	92, 233, 397, 412, 571, 938, 2879
Hin6I	GCGC	7 cut(s)	90, 231, 395, 410, 569, 936, 2877
HinP1I	GCGC	7 cut(s)	90, 231, 395, 410, 569, 936, 2877
HincII	GTYRAC	3 cut(s)	109, 373, 474
HindII	GTYRAC	3 cut(s)	109, 373, 474
HindIII	AAGCTT	5 cut(s)	42, 1356, 1379, 1514, 2654
HpaII	CCGG	3 cut(s)	549, 694, 899
HphI	GGTGA	2 cut(s)	807, 2342
Hpy166II	GTNNAC	6 cut(s)	109, 373, 474, 1921, 1987, 2900
Hpy8I	GTNNAC	6 cut(s)	109, 373, 474, 1921, 1987, 2900
Hpy99I	CGWCG	8 cut(s)	18, 239, 242, 260, 263, 377, 380, 719
HpyCH4III	ACNGT	8 cut(s)	286, 491, 1010, 1905, 1925, 2120, 2366, 2515
HpyCH4IV	ACGT	4 cut(s)	534, 1612, 1837, 2832
HpyF3I	CTNAG	8 cut(s)	32, 330, 362, 683, 875, 1419, 1896, 2378
HpySE526I	ACGT	4 cut(s)	534, 1612, 1837, 2832
HspAI	GCGC	7 cut(s)	90, 231, 395, 410, 569, 936, 2877
KflI	GGGWCCC	1 cut(s)	2191
Kpn2I	TCCGGA	1 cut(s)	898
Ksp22I	TGATCA	3 cut(s)	247, 832, 2070
Kzo9I	GATC	6 cut(s)	17, 247, 832, 2070, 2314, 2932
LguI	GCTCTTC	2 cut(s)	1125, 1569
MaeI	CTAG	4 cut(s)	602, 1185, 1350, 2955
MaeII	ACGT	4 cut(s)	534, 1612, 1837, 2832
MaeIII	GTNAC	8 cut(s)	813, 1410, 1541, 1967, 2422, 2500, 2731, 2788
MalI	GATC	6 cut(s)	19, 249, 834, 2072, 2316, 2934
MbiI	CCGCTC	2 cut(s)	10, 405
MboI	GATC	6 cut(s)	17, 247, 832, 2070, 2314, 2932
MfeI	CAATTG	2 cut(s)	779, 1293
MhlI	GDGCHC	6 cut(s)	28, 1192, 1212, 2013, 2531, 2838
MlyI	GAGTC	4 cut(s)	63, 659, 1987, 2845
MmeI	TCCRAC	4 cut(s)	555, 681, 738, 2348
Mph1103I	ATGCAT	1 cut(s)	2110
MroI	TCCGGA	1 cut(s)	898
MseI	TTAA	7 cut(s)	1383, 1557, 1830, 2138, 2243, 2915, 2982
MslI	CAYNNNNRTG	1 cut(s)	1916
MspA1I	CMGCKG	4 cut(s)	893, 1676, 1736, 2821
MspCI	CTTAAG	3 cut(s)	1382, 1829, 2981
MspI	CCGG	3 cut(s)	549, 694, 899
MspR9I	CCNGG	3 cut(s)	694, 695, 819
MunI	CAATTG	2 cut(s)	779, 1293
Mva1269I	GAATGC	2 cut(s)	2233, 2404
MvaI	CCWGG	1 cut(s)	819
MvnI	CGCG	8 cut(s)	90, 231, 395, 410, 426, 595, 1521, 2879
NciI	CCSGG	2 cut(s)	694, 695
NcoI	CCATGG	1 cut(s)	1911
NdeI	CATATG	2 cut(s)	1538, 2164
NdeII	GATC	6 cut(s)	17, 247, 832, 2070, 2314, 2932
NlaIV	GGNNCC	7 cut(s)	553, 897, 963, 2192, 2193, 2517, 2528
NmeAIII	GCCGAG	1 cut(s)	92
NmuCI	GTSAC	6 cut(s)	813, 1410, 1541, 1967, 2500, 2788
NruI	TCGCGA	1 cut(s)	1521
NsiI	ATGCAT	1 cut(s)	2110
NspI	RCATGY	1 cut(s)	2134
NspV	TTCGAA	2 cut(s)	164, 2701
PaeR7I	CTCGAG	1 cut(s)	1466
PagI	TCATGA	2 cut(s)	1603, 2722
PciI	ACATGT	1 cut(s)	2130
PciSI	GCTCTTC	2 cut(s)	1125, 1569
PctI	GAATGC	2 cut(s)	2233, 2404
PfeI	GAWTC	7 cut(s)	343, 704, 710, 917, 1892, 1949, 2580
PleI	GAGTC	4 cut(s)	63, 659, 1986, 2845
PpsI	GAGTC	4 cut(s)	63, 659, 1986, 2845
Ppu21I	YACGTR	1 cut(s)	2833
PpuMI	RGGWCCY	2 cut(s)	2191, 2970
PscI	ACATGT	1 cut(s)	2130
Psp1406I	AACGTT	1 cut(s)	534
Psp5II	RGGWCCY	2 cut(s)	2191, 2970
Psp6I	CCWGG	1 cut(s)	817
PspEI	GGTNACC	1 cut(s)	813
PspGI	CCWGG	1 cut(s)	817
PspN4I	GGNNCC	7 cut(s)	553, 897, 963, 2192, 2193, 2517, 2528
PspPI	GGNCC	7 cut(s)	350, 646, 775, 858, 2191, 2515, 2970
PspPPI	RGGWCCY	2 cut(s)	2191, 2970
PstI	CTGCAG	3 cut(s)	585, 943, 2023
PstNI	CAGNNNCTG	1 cut(s)	2408
PvuII	CAGCTG	2 cut(s)	1676, 1736
RruI	TCGCGA	1 cut(s)	1521
RsaI	GTAC	2 cut(s)	1499, 2383
RsaNI	GTAC	2 cut(s)	1498, 2382
RseI	CAYNNNNRTG	1 cut(s)	1916
SalI	GTCGAC	1 cut(s)	371
SapI	GCTCTTC	2 cut(s)	1125, 1569
SaqAI	TTAA	7 cut(s)	1383, 1557, 1830, 2138, 2243, 2915, 2982
Sau3AI	GATC	6 cut(s)	17, 247, 832, 2070, 2314, 2932
Sau96I	GGNCC	7 cut(s)	350, 646, 775, 858, 2191, 2515, 2970
SchI	GAGTC	4 cut(s)	63, 659, 1987, 2845
ScrFI	CCNGG	3 cut(s)	694, 695, 819
SduI	GDGCHC	6 cut(s)	28, 1192, 1212, 2013, 2531, 2838
SfcI	CTRYAG	3 cut(s)	581, 939, 2019
SfiI	GGCCNNNNNGGCC	1 cut(s)	782
Sfr274I	CTCGAG	1 cut(s)	1466
SfuI	TTCGAA	2 cut(s)	164, 2701
SinI	GGWCC	3 cut(s)	2191, 2515, 2970
SlaI	CTCGAG	1 cut(s)	1466
SmaI	CCCGGG	1 cut(s)	695
SmiMI	CAYNNNNRTG	1 cut(s)	1916
SmlI	CTYRAG	4 cut(s)	1382, 1466, 1829, 2981
SmoI	CTYRAG	4 cut(s)	1382, 1466, 1829, 2981
SpeI	ACTAGT	1 cut(s)	1184
SspI	AATATT	2 cut(s)	1456, 2054
SspMI	CTAG	4 cut(s)	602, 1185, 1350, 2955
StyD4I	CCNGG	3 cut(s)	692, 693, 817
StyI	CCWWGG	1 cut(s)	1911
TaaI	ACNGT	8 cut(s)	286, 491, 1010, 1905, 1925, 2120, 2366, 2515
TaiI	ACGT	4 cut(s)	537, 1615, 1840, 2835
TauI	GCSGC	7 cut(s)	13, 66, 228, 231, 392, 395, 896
TfiI	GAWTC	7 cut(s)	343, 704, 710, 917, 1892, 1949, 2580
Tru1I	TTAA	7 cut(s)	1383, 1557, 1830, 2138, 2243, 2915, 2982
Tru9I	TTAA	7 cut(s)	1383, 1557, 1830, 2138, 2243, 2915, 2982
TscAI	CASTG	6 cut(s)	1723, 1800, 2023, 2073, 2369, 2553
TseFI	GTSAC	6 cut(s)	813, 1410, 1541, 1967, 2500, 2788
Tsp45I	GTSAC	6 cut(s)	813, 1410, 1541, 1967, 2500, 2788
TspGWI	ACGGA	6 cut(s)	37, 149, 499, 563, 677, 2189
TspMI	CCCGGG	1 cut(s)	693
TspRI	CASTG	6 cut(s)	1723, 1800, 2023, 2073, 2369, 2553
Vha464I	CTTAAG	3 cut(s)	1382, 1829, 2981
VpaK11BI	GGWCC	3 cut(s)	2191, 2515, 2970
XagI	CCTNNNNNAGG	1 cut(s)	2984
XapI	RAATTY	4 cut(s)	141, 1369, 1432, 1808
XceI	RCATGY	1 cut(s)	2134
XhoI	CTCGAG	1 cut(s)	1466
XmaI	CCCGGG	1 cut(s)	693
XmiI	GTMKAC	2 cut(s)	372, 1986
XspI	CTAG	4 cut(s)	602, 1185, 1350, 2955
Zsp2I	ATGCAT	1 cut(s)	2110

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.