Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0007740

Physical Location & Seq

Genomic Coordinates Forward (+)

28840593 .. 28847194

Gene Structure 6602 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g28100.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2799 bp

ATGAGCTCCGCCAGACCCAAAAACTTCCGCCGCCGCATCGACGACGACGACGACGACGATGCCGACACCCCTTCCACCACTTCCACTCTCAAATCCCTCTCAAAACCCTCCTCCTCCGCCGCCAAGCCTAAGAAGCCTCAGAGCCAAGCCCCGAAGCTCCTCAGCTTCGTCGACGACGAAGAAAACGCCACGCCGTCTCGCTCCTCCTCCTCCTCCTCAAAACGCGACAAGTCGTCTTCCTCCCGCCTCGCCAAGCCCTCCTCAGCTCACAAGCTCACCGCCGCCAAGGACCGTTTGGTAAATTCCACCTCCTCCACCGCCTCCGCTTCTCTCCCCTCCAATGTTCAGCCACAAGCCGGCACCTACACCAAGGAAGCCCTCCGTGAGCTTCAGAAGAACACTCGAACCCTAGCCAGCTCCAGAACCTCCTCCGCCGCCGCCGCCGCCGAGCCTACTATCGTCCTCAGGGGCTCGATTAAGCCCGCCGACGCCTCAATCGCCGACGCCGTTAACGGAGCCAGAGAGCTGGACTCCGACGACGAGGAACAGCAAGGGAGCAAGGATAGGGTTGATGCCGAGTCGAGATTGGCCTCGATGGGGATTGATAAGGACACGTCGGAGTATCCTGATCAGGCCACCATTGAAGCCATTCGGAAGAAACGTGAGCGGCTCCGGAAGTCCAAGCCCGCCGCGCCGGATTTCATTGCATTGGATTCAGGGAGCAACCACGGCGCGGCGGAGGGGTTGAGTGATGAGGAGCCGGAGTTTCGCAACCGAATTGCAATGTTTGGGGAGAAAATGGAGAATAAGAAAGGTGTGTTTGAGGATGTTGATGATACGGGAGTGGATGGTGGATTGAGAAGAGAGAGTGTTGTAGTCGAAGACGATGAGGATGAAGAAGAGAAGATTTGGGAGGAAGAGCAGTTTCGGAAAGGGTTGGGGAAGAGGGTGGATAATGATGGGGCTAGTTTGGGGGTTAGTGCTAGTGTTCCTAGAGTTCATAGTGCTGCGCCGCAGCCCAAGGCTAGCTACAATTCAATCGCGGGGTATAGTTTGGCACAGAGTCTGGCTGGTGTGGCCAGTATAGGAGGGGCAACAGGAGCATCACAAGGTTCGAATGCTTTGTCCATAAACGAGCAATCTGAGATTGCTCAGAAAGCGTTGCTGGAAAATGTGAGGAAGCTTAAGGAAAGTCACGGAAGAACAAAGATGTCACTAACCAAGGCTAATGAGAGTCTATCTGCCTCGCTATTGAACATCACTGATCTTGAAAAGTCTCTGTCTGCTGCTGACGAGAAGTACAAGTTCATGCAAGAGCTTCGCGACTTTGTCTCTACCATATGTGACTTTTTGCAGGATAAAGCTCCCTTGATAGAGGAGCTTGAAGAGGAAATGCAGAAGCAACGTGACGAACGTGCTTCAGCTATTTTTGAAAGAAGAATTGCTGATAATGATGATGAAATGATGGAAGTAGAAGCAGCTGTAAATGCAGCAATGTCTATTTTCAGTAAAGAAGGTACCAGTGCTGGAGTAATTGCAGTTGCTAAAAGTGCAGCACAAGCTGCTTCTGCTGCTGTGAGAGAACAAAAAAATTTACCGGTCAAGCTAGATGAATTCGGTAGAGATATGAACCTTAAGAAACGTCTGGATATGAAAGGCAGGGCCGAAGCTCGTCAACGCAGGAGAAAAAGGTATGAAGCTAAGAGAGAGTCATCCATGGATGTGGACAGTCCTGATCGGACGGTAGAAGGGGAATCAAGCACTGATGAGAGTGACGGTGAGAGTAAAGAGTACGAGTCACACCGCCAGTTGGTGCTGGGGACTGCTGATCAAGTTTTCAGTGATGCAGCTGAGGAATATTCACAACTTTCACTTGTCAAAGAAAGGTTTGAAAAATGGAAGAGAGAGTATCGATCAAGTTACCGTGATGCTTACATGTCATTGAGTGTTCCTATTATATTCTCTCCATACGTAAGGCTGGAGCTCTTGAAGTGGGACCCTCTCCGTGAGAACACAGATTTTGTAAAGATGAGCTGGCATGAATTATTAGAGAATTACGGTGTACCGGAGGATGGTTCGGATTTTGCATCTGATGATGCTGATGCTAACCTTATCCCTGCATTGGTGGAAAAGGTTGCATTACCCATTTTGCATCATCAAATTGTTCACTGCTGGGATATTCTCAGCACAAGAGAGACAAAGAATGCAGTTGCTGCCACGAGCTTGGTAACAGATTATGTCTCTTCCAGTGAGGCTCTTGAAGACTTATTAGTTGCTATTCGCACCCGTCTGGCAGATGCTGTCTCGAAACTTATGGTCCCAACATGGAGCCCACTTGTATTGAAAGCAGTGCCAAATGCTGCAAGAATTGCAGCGTATCGATTTGGCATGTCTGTTCGTTTGATGAAAAATATCTGCTTGTGGAAAGAAATCCTTGCTTTGCCAGTTCTAGAGAAGCTTGCTATTAATGAGCTTTTGTGTGGCAAAGTTATACCTCACATTCGAAGCATTGCTGCCGATGTTCATGATGCAGTTACAAGAACTGAAAGGGTTATTGCTTCTCTGTCAGGGGTGTGGTCAGGTTCAGATGTTACAGGAGACCGTAGCCGCAAGTTGCAATCCCTGGTGGATTATGTGCTGACGCTGGGGAAGACTATAGAGAAGAAGCATTCGCTGGGTGTTACACAAAGTGAAACTGGTGGACTGGCTCGTAGATTGAAGAAGATGCTGGTTGAGCTCAACGAGTATGACAAGGCCAGGGACGTAGCTAGGACCTTCCATCTAAAAGAGGCATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000122 GO:0000375 GO:0000377 GO:0000398 GO:0000976 GO:0000977 GO:0000978 GO:0000981 GO:0000982 GO:0000987 GO:0001012 GO:0001067 GO:0001078 GO:0001227 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006355 GO:0006357 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0008380 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0016070 GO:0016071 GO:0017148 GO:0019219 GO:0019222 GO:0022402 GO:0030371 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032268 GO:0032269 GO:0034248 GO:0034249 GO:0034641 GO:0034645 GO:0042023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044786 GO:0045182 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1902679 GO:1903506 GO:1903507 GO:1990837 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GCFC NTR2

Protein Analysis

933

Amino Acids

102.54

Weight (kDa)

5.53

Isoelectric Point (pI)

47.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GCFC	PF07842	625 - 826	9.7e-31	GC-rich sequence DNA-binding factor-like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007740)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08550
fragaria_vesca	FvH4_4g28100 FvH4_4g28100 FvH4_4g28100 FvH4_4g28100 FvH4_4g28100
malus_domestica	MD13G1046700.v1.1 MD16G1048400.v1.1
prunus_persica	Prupe.1G305200_v2.0.a1 Prupe.1G305200_v2.0.a1 Prupe.1G305200_v2.0.a1 Prupe.1G305200_v2.0.a1
pyrus_communis	pycom13g04090 pycom16g04230
rosa_chinensis	RchiOBHm_Chr4g0435851
rosa_laevigata	RLG00000006554
rosa_multiflora	Rmu_sc0002642.1_g000001
rosa_roxburghii	Rroxscaffold_5G00377030
rosa_rugosa	Rorug04G0290000
rosa_samantha	Rh4AG344300 Rh4BG353200 Rh4CG367600 Rh4DG347100
rosa_wichuraiana	Rw4G030080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1517
AccB1I	GGYRCC	2 cut(s)	359, 1517
AccBSI	CCGCTC	1 cut(s)	667
AccI	GTMKAC	1 cut(s)	171
AccII	CGCG	5 cut(s)	225, 692, 734, 1043, 1323
AccIII	TCCGGA	1 cut(s)	672
AcoI	YGGCCR	1 cut(s)	1077
AcsI	RAATTY	3 cut(s)	301, 1591, 1613
AcuI	CTGAAG	2 cut(s)	374, 1404
AcyI	GRCGYC	2 cut(s)	489, 504
AdeI	CACNNNGTG	1 cut(s)	2690
AfaI	GTAC	4 cut(s)	1301, 1519, 1793, 2064
AfiI	CCNNNNNNNGG	6 cut(s)	356, 597, 733, 1810, 2072, 2122
AflII	CTTAAG	2 cut(s)	1184, 1634
AflIII	ACRYGT	2 cut(s)	612, 1935
AgeI	ACCGGT	1 cut(s)	1597
AhdI	GACNNNNNGTC	1 cut(s)	232
AjiI	CACGTC	1 cut(s)	615
AjnI	CCWGG	2 cut(s)	2622, 2756
Alw21I	GWGCWC	3 cut(s)	8, 1986, 2739
Alw26I	GTCTC	7 cut(s)	201, 1281, 1336, 2189, 2245, 2308, 2592
AlwNI	CAGNNNCTG	3 cut(s)	1066, 2213, 2300
Aor13HI	TCCGGA	1 cut(s)	672
AoxI	GGCC	5 cut(s)	588, 633, 1077, 1662, 2754
ApoI	RAATTY	3 cut(s)	301, 1591, 1613
ArsI	GACNNNNNNTTYG	2 cut(s)	1109, 1141
AseI	ATTAAT	1 cut(s)	2466
AsiGI	ACCGGT	1 cut(s)	1597
Asp700I	GAANNNNTTC	1 cut(s)	648
Asp718I	GGTACC	1 cut(s)	1517
AspLEI	GCGC	3 cut(s)	694, 734, 1012
AspS9I	GGNCC	5 cut(s)	289, 1662, 1996, 2317, 2772
AsuHPI	GGTGA	2 cut(s)	268, 1790
AsuII	TTCGAA	2 cut(s)	1115, 2503
AsuNHI	GCTAGC	1 cut(s)	1025
AvaII	GGWCC	4 cut(s)	289, 1996, 2317, 2772
AxyI	CCTNAGG	1 cut(s)	464
BaeI	ACNNNNGTAYC	2 cut(s)	828, 861
BalI	TGGCCA	1 cut(s)	1079
BanI	GGYRCC	2 cut(s)	359, 1517
BanII	GRGCYC	5 cut(s)	8, 473, 1986, 2333, 2739
BauI	CACGAG	1 cut(s)	2218
BbsI	GAAGAC	4 cut(s)	228, 888, 2268, 2657
Bbv12I	GWGCWC	3 cut(s)	8, 1986, 2739
BbvCI	CCTCAGC	3 cut(s)	161, 262, 1851
BccI	CCATC	6 cut(s)	589, 842, 953, 1459, 2066, 2787
BceAI	ACGGC	3 cut(s)	178, 491, 745
BcgI	CGANNNNNNTGC	4 cut(s)	41, 75, 1301, 1335
BciT130I	CCWGG	2 cut(s)	2624, 2758
BciVI	GTATCC	1 cut(s)	633
BclI	TGATCA	2 cut(s)	628, 1828
BcoDI	GTCTC	7 cut(s)	201, 1281, 1336, 2189, 2245, 2308, 2592
BfaI	CTAG	8 cut(s)	410, 966, 984, 993, 1026, 1607, 2450, 2769
BfmI	CTRYAG	1 cut(s)	2655
BfrI	CTTAAG	2 cut(s)	1184, 1634
BfuI	GTATCC	1 cut(s)	633
Bme1390I	CCNGG	2 cut(s)	2624, 2758
Bme18I	GGWCC	4 cut(s)	289, 1996, 2317, 2772
BmeRI	GACNNNNNGTC	1 cut(s)	232
BmgBI	CACGTC	1 cut(s)	615
BmgT120I	GGNCC	5 cut(s)	289, 1662, 1996, 2317, 2772
BmiI	GGNNCC	9 cut(s)	361, 517, 671, 759, 1519, 1997, 1998, 2319, 2330
BmrFI	CCNGG	2 cut(s)	2624, 2758
BmtI	GCTAGC	1 cut(s)	1029
BpiI	GAAGAC	4 cut(s)	228, 888, 2268, 2657
BplI	GAGNNNNNCTC	2 cut(s)	515, 547
BpmI	CTGGAG	3 cut(s)	403, 1548, 2000
Bpu10I	CCTNAGC	3 cut(s)	161, 262, 1851
Bpu14I	TTCGAA	2 cut(s)	1115, 2503
Bsa29I	ATCGAT	2 cut(s)	1912, 2380
BsaAI	YACGTR	1 cut(s)	1972
BsaHI	GRCGYC	2 cut(s)	489, 504
BsaI	GGTCTC	1 cut(s)	2592
BsaJI	CCNNGG	8 cut(s)	285, 369, 727, 1020, 1221, 1716, 2622, 2757
BsaWI	WCCGGW	3 cut(s)	672, 1597, 2065
BsaXI	ACNNNNNCTCC	2 cut(s)	749, 779
Bsc4I	CCNNNNNNNGG	6 cut(s)	356, 597, 733, 1810, 2072, 2122
Bse118I	RCCGGY	2 cut(s)	356, 1597
Bse1I	ACTGG	7 cut(s)	1080, 1521, 1807, 2247, 2444, 2701, 2709
Bse21I	CCTNAGG	1 cut(s)	464
Bse3DI	GCAATG	4 cut(s)	702, 789, 1500, 2508
BseAI	TCCGGA	1 cut(s)	672
BseBI	CCWGG	2 cut(s)	2624, 2758
BseCI	ATCGAT	2 cut(s)	1912, 2380
BseDI	CCNNGG	8 cut(s)	285, 369, 727, 1020, 1221, 1716, 2622, 2757
BseGI	GGATG	6 cut(s)	832, 853, 898, 1712, 1726, 2077
BseLI	CCNNNNNNNGG	6 cut(s)	356, 597, 733, 1810, 2072, 2122
BseMI	GCAATG	4 cut(s)	702, 789, 1500, 2508
BseMII	CTCAG	8 cut(s)	152, 175, 276, 478, 1134, 1166, 1842, 2197
BseNI	ACTGG	7 cut(s)	1080, 1521, 1807, 2247, 2444, 2701, 2709
BseYI	CCCAGC	4 cut(s)	1816, 2172, 2644, 2674
BsgI	GTGCAG	1 cut(s)	1572
Bsh1236I	CGCG	5 cut(s)	225, 692, 734, 1043, 1323
BshFI	GGCC	5 cut(s)	590, 635, 1079, 1664, 2756
BshNI	GGYRCC	2 cut(s)	359, 1517
BshTI	ACCGGT	1 cut(s)	1597
BshVI	ATCGAT	2 cut(s)	1912, 2380
BsiHKAI	GWGCWC	3 cut(s)	8, 1986, 2739
BsiSI	CCGG	6 cut(s)	357, 673, 695, 761, 1598, 2066
BslFI	GGGAC	4 cut(s)	1834, 2009, 2303, 2774
BslI	CCNNNNNNNGG	6 cut(s)	356, 597, 733, 1810, 2072, 2122
BsmAI	GTCTC	7 cut(s)	201, 1281, 1336, 2189, 2245, 2308, 2592
BsmBI	CGTCTC	1 cut(s)	201
BsmFI	GGGAC	4 cut(s)	1834, 2009, 2303, 2774
BsmI	GAATGC	3 cut(s)	1123, 2209, 2668
BsnI	GGCC	5 cut(s)	590, 635, 1079, 1664, 2756
Bso31I	GGTCTC	1 cut(s)	2592
Bsp119I	TTCGAA	2 cut(s)	1115, 2503
Bsp1286I	GDGCHC	5 cut(s)	8, 473, 1986, 2333, 2739
Bsp13I	TCCGGA	1 cut(s)	672
Bsp143I	GATC	5 cut(s)	628, 1264, 1735, 1828, 1913
Bsp19I	CCATGG	1 cut(s)	1716
Bsp68I	TCGCGA	1 cut(s)	1323
BspANI	GGCC	5 cut(s)	590, 635, 1079, 1664, 2756
BspCNI	CTCAG	8 cut(s)	151, 174, 275, 477, 1135, 1165, 1843, 2196
BspDI	ATCGAT	2 cut(s)	1912, 2380
BspEI	TCCGGA	1 cut(s)	672
BspFNI	CGCG	5 cut(s)	225, 692, 734, 1043, 1323
BspHI	TCATGA	1 cut(s)	2524
BspLI	GGNNCC	9 cut(s)	361, 517, 671, 759, 1519, 1997, 1998, 2319, 2330
BspOI	GCTAGC	1 cut(s)	1029
BspQI	GCTCTTC	1 cut(s)	912
BspT104I	TTCGAA	2 cut(s)	1115, 2503
BspT107I	GGYRCC	2 cut(s)	359, 1517
BspTI	CTTAAG	2 cut(s)	1184, 1634
BspTNI	GGTCTC	1 cut(s)	2592
BsrBI	CCGCTC	1 cut(s)	667
BsrDI	GCAATG	4 cut(s)	702, 789, 1500, 2508
BsrFI	RCCGGY	2 cut(s)	356, 1597
BsrI	ACTGG	7 cut(s)	1080, 1521, 1807, 2247, 2444, 2701, 2709
BssAI	RCCGGY	2 cut(s)	356, 1597
BssECI	CCNNGG	8 cut(s)	285, 369, 727, 1020, 1221, 1716, 2622, 2757
BssMI	GATC	5 cut(s)	628, 1264, 1735, 1828, 1913
BssNI	GRCGYC	2 cut(s)	489, 504
BssSI	CACGAG	1 cut(s)	2218
BssT1I	CCWWGG	5 cut(s)	285, 369, 1020, 1221, 1716
Bst2BI	CACGAG	1 cut(s)	2218
Bst2UI	CCWGG	2 cut(s)	2624, 2758
Bst4CI	ACNGT	7 cut(s)	293, 1730, 1744, 1778, 1925, 2060, 2603
Bst6I	CTCTTC	7 cut(s)	856, 894, 912, 938, 1380, 1895, 2248
BstACI	GRCGYC	2 cut(s)	489, 504
BstAFI	CTTAAG	2 cut(s)	1184, 1634
BstAPI	GCANNNNNTGC	3 cut(s)	1562, 2213, 2369
BstBAI	YACGTR	1 cut(s)	1972
BstBI	TTCGAA	2 cut(s)	1115, 2503
BstC8I	GCNNGC	7 cut(s)	358, 415, 483, 687, 1027, 2036, 2460
BstDSI	CCRYGG	2 cut(s)	727, 1716
BstF5I	GGATG	6 cut(s)	832, 853, 898, 1712, 1726, 2077
BstFNI	CGCG	5 cut(s)	225, 692, 734, 1043, 1323
BstHHI	GCGC	3 cut(s)	694, 734, 1012
BstKTI	GATC	5 cut(s)	631, 1267, 1738, 1831, 1916
BstMAI	GTCTC	7 cut(s)	201, 1281, 1336, 2189, 2245, 2308, 2592
BstMBI	GATC	5 cut(s)	628, 1264, 1735, 1828, 1913
BstNI	CCWGG	2 cut(s)	2624, 2758
BstNSI	RCATGY	2 cut(s)	1939, 2392
BstSCI	CCNGG	2 cut(s)	2622, 2756
BstSFI	CTRYAG	1 cut(s)	2655
BstSNI	TACGTA	1 cut(s)	1972
BstUI	CGCG	5 cut(s)	225, 692, 734, 1043, 1323
BstV2I	GAAGAC	4 cut(s)	228, 888, 2268, 2657
BstXI	CCANNNNNNTGG	3 cut(s)	526, 1723, 2224
Bsu15I	ATCGAT	2 cut(s)	1912, 2380
Bsu36I	CCTNAGG	1 cut(s)	464
BsuI	GTATCC	1 cut(s)	633
BsuRI	GGCC	5 cut(s)	590, 635, 1079, 1664, 2756
BsuTUI	ATCGAT	2 cut(s)	1912, 2380
BtgI	CCRYGG	2 cut(s)	727, 1716
BtrI	CACGTC	1 cut(s)	615
BtsCI	GGATG	6 cut(s)	832, 853, 898, 1712, 1726, 2077
BtsI	GCAGTG	2 cut(s)	2167, 2355
BtsIMutI	CAGTG	7 cut(s)	1260, 1528, 1761, 1846, 2167, 2254, 2355
BtuMI	TCGCGA	1 cut(s)	1323
Cac8I	GCNNGC	7 cut(s)	358, 415, 483, 687, 1027, 2036, 2460
CaiI	CAGNNNCTG	3 cut(s)	1066, 2213, 2300
CciI	TCATGA	1 cut(s)	2524
CfoI	GCGC	3 cut(s)	694, 734, 1012
Cfr10I	RCCGGY	2 cut(s)	356, 1597
Cfr13I	GGNCC	5 cut(s)	289, 1662, 1996, 2317, 2772
ClaI	ATCGAT	2 cut(s)	1912, 2380
CseI	GACGC	3 cut(s)	497, 512, 2650
Csp6I	GTAC	4 cut(s)	1300, 1518, 1792, 2063
CspAI	ACCGGT	1 cut(s)	1597
CspCI	CAANNNNNGTGG	2 cut(s)	2322, 2357
CviAII	CATG	7 cut(s)	1309, 1717, 1936, 2039, 2325, 2389, 2525
CviQI	GTAC	4 cut(s)	1300, 1518, 1792, 2063
DpnI	GATC	5 cut(s)	630, 1266, 1737, 1830, 1915
DpnII	GATC	5 cut(s)	628, 1264, 1735, 1828, 1913
DraIII	CACNNNGTG	1 cut(s)	2690
DriI	GACNNNNNGTC	1 cut(s)	232
EaeI	YGGCCR	1 cut(s)	1077
Eam1104I	CTCTTC	7 cut(s)	856, 894, 912, 938, 1380, 1895, 2248
Eam1105I	GACNNNNNGTC	1 cut(s)	232
EarI	CTCTTC	7 cut(s)	856, 894, 912, 938, 1380, 1895, 2248
EciI	GGCGGA	4 cut(s)	17, 106, 421, 752
Ecl136II	GAGCTC	3 cut(s)	6, 1984, 2737
Eco105I	TACGTA	1 cut(s)	1972
Eco130I	CCWWGG	5 cut(s)	285, 369, 1020, 1221, 1716
Eco24I	GRGCYC	5 cut(s)	8, 473, 1986, 2333, 2739
Eco31I	GGTCTC	1 cut(s)	2592
Eco47I	GGWCC	4 cut(s)	289, 1996, 2317, 2772
Eco53kI	GAGCTC	3 cut(s)	6, 1984, 2737
Eco57I	CTGAAG	2 cut(s)	374, 1404
Eco81I	CCTNAGG	1 cut(s)	464
EcoICRI	GAGCTC	3 cut(s)	6, 1984, 2737
EcoO109I	RGGNCCY	2 cut(s)	1996, 2772
EcoRI	GAATTC	1 cut(s)	1613
EcoRII	CCWGG	2 cut(s)	2622, 2756
EcoT14I	CCWWGG	5 cut(s)	285, 369, 1020, 1221, 1716
EcoT38I	GRGCYC	5 cut(s)	8, 473, 1986, 2333, 2739
ErhI	CCWWGG	5 cut(s)	285, 369, 1020, 1221, 1716
Esp3I	CGTCTC	1 cut(s)	201
FaeI	CATG	7 cut(s)	1312, 1720, 1939, 2042, 2328, 2392, 2528
FalI	AAGNNNNNCTT	2 cut(s)	2418, 2450
FaqI	GGGAC	4 cut(s)	1834, 2009, 2303, 2774
FatI	CATG	7 cut(s)	1308, 1716, 1935, 2038, 2324, 2388, 2524
FauI	CCCGC	4 cut(s)	251, 490, 694, 1036
FauNDI	CATATG	1 cut(s)	1340
FbaI	TGATCA	2 cut(s)	628, 1828
FblI	GTMKAC	1 cut(s)	171
FokI	GGATG	6 cut(s)	839, 860, 905, 1699, 1733, 2084
FriOI	GRGCYC	5 cut(s)	8, 473, 1986, 2333, 2739
FspBI	CTAG	8 cut(s)	410, 966, 984, 993, 1026, 1607, 2450, 2769
GlaI	GCGC	3 cut(s)	693, 733, 1011
GsaI	CCCAGC	4 cut(s)	1820, 2176, 2648, 2678
GsuI	CTGGAG	3 cut(s)	403, 1548, 2000
HaeIII	GGCC	5 cut(s)	590, 635, 1079, 1664, 2756
HapII	CCGG	6 cut(s)	357, 673, 695, 761, 1598, 2066
HgaI	GACGC	3 cut(s)	497, 512, 2650
HhaI	GCGC	3 cut(s)	694, 734, 1012
Hin1I	GRCGYC	2 cut(s)	489, 504
Hin1II	CATG	7 cut(s)	1312, 1720, 1939, 2042, 2328, 2392, 2528
Hin6I	GCGC	3 cut(s)	692, 732, 1010
HinP1I	GCGC	3 cut(s)	692, 732, 1010
HincII	GTYRAC	3 cut(s)	172, 511, 1676
HindII	GTYRAC	3 cut(s)	172, 511, 1676
HindIII	AAGCTT	2 cut(s)	1181, 2456
HinfI	GANTC	8 cut(s)	530, 578, 713, 1063, 1234, 1709, 1754, 1796
HpaI	GTTAAC	1 cut(s)	511
HpaII	CCGG	6 cut(s)	357, 673, 695, 761, 1598, 2066
HphI	GGTGA	2 cut(s)	268, 1790
Hpy166II	GTNNAC	7 cut(s)	172, 511, 1676, 1726, 2063, 2167, 2702
Hpy8I	GTNNAC	7 cut(s)	172, 511, 1676, 1726, 2063, 2167, 2702
HpyAV	CCTTC	4 cut(s)	81, 1508, 1742, 2785
HpyCH4III	ACNGT	7 cut(s)	293, 1730, 1744, 1778, 1925, 2060, 2603
HpyCH4IV	ACGT	7 cut(s)	614, 661, 1405, 1414, 1642, 1971, 2763
HpySE526I	ACGT	7 cut(s)	614, 661, 1405, 1414, 1642, 1971, 2763
Hsp92I	GRCGYC	2 cut(s)	489, 504
Hsp92II	CATG	7 cut(s)	1312, 1720, 1939, 2042, 2328, 2392, 2528
HspAI	GCGC	3 cut(s)	692, 732, 1010
KflI	GGGWCCC	1 cut(s)	1996
Kpn2I	TCCGGA	1 cut(s)	672
KpnI	GGTACC	1 cut(s)	1521
KroI	GCCGGC	1 cut(s)	356
KroNI	GCCGGC	1 cut(s)	358
Ksp22I	TGATCA	2 cut(s)	628, 1828
KspAI	GTTAAC	1 cut(s)	511
Kzo9I	GATC	5 cut(s)	628, 1264, 1735, 1828, 1913
LguI	GCTCTTC	1 cut(s)	912
MaeI	CTAG	8 cut(s)	410, 966, 984, 993, 1026, 1607, 2450, 2769
MaeII	ACGT	7 cut(s)	614, 661, 1405, 1414, 1642, 1971, 2763
MalI	GATC	5 cut(s)	630, 1266, 1737, 1830, 1915
MbiI	CCGCTC	1 cut(s)	667
MboI	GATC	5 cut(s)	628, 1264, 1735, 1828, 1913
MhlI	GDGCHC	5 cut(s)	8, 473, 1986, 2333, 2739
MlsI	TGGCCA	1 cut(s)	1079
MluNI	TGGCCA	1 cut(s)	1079
MlyI	GAGTC	6 cut(s)	524, 587, 1072, 1243, 1718, 1805
MmeI	TCCRAC	2 cut(s)	558, 597
Mox20I	TGGCCA	1 cut(s)	1079
MroI	TCCGGA	1 cut(s)	672
MroNI	GCCGGC	1 cut(s)	356
MroXI	GAANNNNTTC	1 cut(s)	648
MscI	TGGCCA	1 cut(s)	1079
MseI	TTAA	5 cut(s)	477, 510, 1185, 1635, 2466
MslI	CAYNNNNRTG	1 cut(s)	1721
Msp20I	TGGCCA	1 cut(s)	1079
MspA1I	CMGCKG	2 cut(s)	1481, 1850
MspCI	CTTAAG	2 cut(s)	1184, 1634
MspI	CCGG	6 cut(s)	357, 673, 695, 761, 1598, 2066
MspR9I	CCNGG	2 cut(s)	2624, 2758
Mva1269I	GAATGC	3 cut(s)	1123, 2209, 2668
MvaI	CCWGG	2 cut(s)	2624, 2758
MvnI	CGCG	5 cut(s)	225, 692, 734, 1043, 1323
NaeI	GCCGGC	1 cut(s)	358
NcoI	CCATGG	1 cut(s)	1716
NdeI	CATATG	1 cut(s)	1340
NdeII	GATC	5 cut(s)	628, 1264, 1735, 1828, 1913
NgoMIV	GCCGGC	1 cut(s)	356
NheI	GCTAGC	1 cut(s)	1025
NlaIII	CATG	7 cut(s)	1312, 1720, 1939, 2042, 2328, 2392, 2528
NlaIV	GGNNCC	9 cut(s)	361, 517, 671, 759, 1519, 1997, 1998, 2319, 2330
NmeAIII	GCCGAG	2 cut(s)	472, 601
NmuCI	GTSAC	6 cut(s)	1193, 1212, 1343, 1406, 1772, 1797
NruI	TCGCGA	1 cut(s)	1323
NspI	RCATGY	2 cut(s)	1939, 2392
NspV	TTCGAA	2 cut(s)	1115, 2503
PagI	TCATGA	1 cut(s)	2524
PciI	ACATGT	1 cut(s)	1935
PciSI	GCTCTTC	1 cut(s)	912
PcsI	WCGNNNNNNNCGW	9 cut(s)	45, 48, 51, 54, 60, 174, 504, 658, 1411
PctI	GAATGC	3 cut(s)	1123, 2209, 2668
PdiI	GCCGGC	1 cut(s)	358
PdmI	GAANNNNTTC	1 cut(s)	648
PfeI	GAWTC	2 cut(s)	713, 1754
PflFI	GACNNNGTC	1 cut(s)	1328
PinAI	ACCGGT	1 cut(s)	1597
PleI	GAGTC	6 cut(s)	524, 586, 1071, 1242, 1717, 1804
PpsI	GAGTC	6 cut(s)	524, 586, 1071, 1242, 1717, 1804
Ppu21I	YACGTR	1 cut(s)	1972
PpuMI	RGGWCCY	2 cut(s)	1996, 2772
PscI	ACATGT	1 cut(s)	1935
PshBI	ATTAAT	1 cut(s)	2466
Psp124BI	GAGCTC	3 cut(s)	8, 1986, 2739
Psp5II	RGGWCCY	2 cut(s)	1996, 2772
Psp6I	CCWGG	2 cut(s)	2622, 2756
PspFI	CCCAGC	4 cut(s)	1816, 2172, 2644, 2674
PspGI	CCWGG	2 cut(s)	2622, 2756
PspN4I	GGNNCC	9 cut(s)	361, 517, 671, 759, 1519, 1997, 1998, 2319, 2330
PspPI	GGNCC	5 cut(s)	289, 1662, 1996, 2317, 2772
PspPPI	RGGWCCY	2 cut(s)	1996, 2772
PstNI	CAGNNNCTG	3 cut(s)	1066, 2213, 2300
PsyI	GACNNNGTC	1 cut(s)	1328
PvuII	CAGCTG	2 cut(s)	1481, 1850
RruI	TCGCGA	1 cut(s)	1323
RsaI	GTAC	4 cut(s)	1301, 1519, 1793, 2064
RsaNI	GTAC	4 cut(s)	1300, 1518, 1792, 2063
RseI	CAYNNNNRTG	1 cut(s)	1721
SacI	GAGCTC	3 cut(s)	8, 1986, 2739
SalI	GTCGAC	1 cut(s)	170
SapI	GCTCTTC	1 cut(s)	912
SaqAI	TTAA	5 cut(s)	477, 510, 1185, 1635, 2466
Sau3AI	GATC	5 cut(s)	628, 1264, 1735, 1828, 1913
Sau96I	GGNCC	5 cut(s)	289, 1662, 1996, 2317, 2772
SchI	GAGTC	6 cut(s)	524, 587, 1072, 1243, 1718, 1805
ScrFI	CCNGG	2 cut(s)	2624, 2758
SduI	GDGCHC	5 cut(s)	8, 473, 1986, 2333, 2739
SfcI	CTRYAG	1 cut(s)	2655
SfuI	TTCGAA	2 cut(s)	1115, 2503
SgrDI	CGTCGACG	1 cut(s)	170
SinI	GGWCC	4 cut(s)	289, 1996, 2317, 2772
SmiMI	CAYNNNNRTG	1 cut(s)	1721
SmlI	CTYRAG	2 cut(s)	1184, 1634
SmoI	CTYRAG	2 cut(s)	1184, 1634
SnaBI	TACGTA	1 cut(s)	1972
SspI	AATATT	1 cut(s)	1859
SspMI	CTAG	8 cut(s)	410, 966, 984, 993, 1026, 1607, 2450, 2769
SstI	GAGCTC	3 cut(s)	8, 1986, 2739
StyD4I	CCNGG	2 cut(s)	2622, 2756
StyI	CCWWGG	5 cut(s)	285, 369, 1020, 1221, 1716
TaaI	ACNGT	7 cut(s)	293, 1730, 1744, 1778, 1925, 2060, 2603
TaiI	ACGT	7 cut(s)	617, 664, 1408, 1417, 1645, 1974, 2766
TatI	WGTACW	1 cut(s)	1299
TfiI	GAWTC	2 cut(s)	713, 1754
Tru1I	TTAA	5 cut(s)	477, 510, 1185, 1635, 2466
Tru9I	TTAA	5 cut(s)	477, 510, 1185, 1635, 2466
TscAI	CASTG	7 cut(s)	1267, 1528, 1768, 1846, 2174, 2254, 2355
TseFI	GTSAC	6 cut(s)	1193, 1212, 1343, 1406, 1772, 1797
Tsp45I	GTSAC	6 cut(s)	1193, 1212, 1343, 1406, 1772, 1797
TspGWI	ACGGA	4 cut(s)	371, 528, 1212, 1994
TspRI	CASTG	7 cut(s)	1267, 1528, 1768, 1846, 2174, 2254, 2355
Tth111I	GACNNNGTC	1 cut(s)	1328
Vha464I	CTTAAG	2 cut(s)	1184, 1634
VpaK11BI	GGWCC	4 cut(s)	289, 1996, 2317, 2772
VspI	ATTAAT	1 cut(s)	2466
XapI	RAATTY	3 cut(s)	301, 1591, 1613
XbaI	TCTAGA	1 cut(s)	2449
XceI	RCATGY	2 cut(s)	1939, 2392
XcmI	CCANNNNNNNNNTGG	1 cut(s)	292
XmiI	GTMKAC	1 cut(s)	171
XmnI	GAANNNNTTC	1 cut(s)	648
XspI	CTAG	8 cut(s)	410, 966, 984, 993, 1026, 1607, 2450, 2769

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.