Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011231

Physical Location & Seq

Genomic Coordinates Reverse (-)

3102195 .. 3105950

Gene Structure 3756 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G09950.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2988 bp

ATGACTAATTGTGTTCCTCTTTCTTTTGTTCAGAGCTGCGTTGGACATAGAGGAGCTGCTAGATTCTTCCATTCCCGATTATATAAGAATAGGTTAGATAAAGATGTCTACTTGTGCAACAACCTCATCAATGCTTATCTTGAAACGGGTGATTCGGTTTCTGCACGTAAGGTGTTTGACGAAATGCCTCTTAGGAACTGTGTTTCTTGGGCGTGTATTGTTTCAGGATATAGTCGTAATGGAGAACATAAGGAAGCTTTAGTGTTTTTGAGAGATATGGTTAAAGAAGGGATTTTTTCTAATCAATACGCTTTTGTTAGTGTTCTTCGGGCTTGTCAGGAGATAGGTTCTGTTGGGATTCTTTTCGGGAGACAAATTCATGGCCTGATGTTCAAACTTTCTTATGCAGTGGATGCAGTTGTTTCTAATGTGCTCATATCAATGTACTGGAAATGTATCGGGTCTGTCGGTTATGCTCTCTGTGCTTTCGGTGACATAGAAGTTAAGAATTCTGTTTCATGGAATTCGATTATTTCGGTTTATTCACAGGCTGGGGATCAGAGATCTGCGTTTAGGATTTTCTCTAGCATGCAATATGATGGTTCTAGACCAACTGAATACACTTTTGGTAGTCTTGTAACTACTGCTTGTTCTTTGACTGAACCAGATGTTCGTTTGCTCGAGCAGATCATGTGCACCATACAGAAATCAGGGTTGCTCACAGATCTTTTTGTTGGCAGCGGACTGGTGAGTGCATTTGCAAAGTCTGGTTCATTGAGTTATGCTAGGAAGGTTTTTAATCAGATGGAAACAAGAAATGCGGTCACCTTAAATGGTCTAATGGTTGGTCTGGTGCGACAGAAATGGGGAGAAGAAGCAACTAAACTCTTTATGGATATGAATAGCATGATTGATGTTAGTCCTGAGTCATACGTGATTCTCCTGAGCTCATTTCCTGAGTATTCTCTAGCAGAGGAAGTTGGTCTGAAAAAAGGCAGAGAGGTTCATGGACATGTAATAACAACTGGCTTAGTTGACTTCATGGTTGGCATTGGAAATGGCCTTGTTAATATGTATGCTAAGTGCGGCTCAATAGCTGACGCTAGACGTGTTTTCTATTTCATGACCGATAAAGATTCTGTCTCCTGGAACTCCATGATCACTGGTCTTGACCAAAACGGCTGTTTCATAGAAGCAGTTGAACGCTACAAAAGTATGAGACGACATGACATCTTGCCTGGAAGTTTCACACTGATTAGTTCGCTAAGCTCATGCGCGAGCTTGAAATGGGCAAAATTAGGACAACAGATTCATGGAGAGAGCCTCAAGTTGGGGATTGATTTGAATGTTTCAGTTTCAAATGCGCTTATGACACTGTATGCAGAGACCGGCTATCTCAATGAATGCCGTAAGATATTTTCCTCAATGCCAGAGCATGATCAGGTGTCTTGGAATTCTATAATAGGAGCTTTAGCCCGTTCAGAACGGTCATTACCTGAAGCCGTGGTATGTTTCTTGAATGCACAACGAGCAGGACAGAAACTTAATAGAATAACCTTTTCAAGCGTTCTTTCAGCCGTTTCATCCCTTTCATTTGGTGAACTGGGCAAGCAGATACACGGACTAGCTTTAAAGAACAATATTGCAGATGAAGCAACCACTGAAAATGCGCTTATAGCTTGTTATGGGAAGTGTGGGGAGATGGATGGGTGTGAGAAGATATTTTCTAGAATGGCAGAGAGAAGAGATAATGTAACTTGGAACTCAATGATCTCGGGGTATATACATAACGAGCTCCTTGCCAAGGCCTTGGATTTGGTCTGGTTTATGTTGCAGACAGGTCAGAGATTGGATAGTTTCATGTATGCGACTGTTCTTAGCGCGTTTGCTTCTGTTGCAACGCTAGAGCGTGGTATGGAAGTGCATGCTTGTTCGGTGAGAGCTTGTTTAGAATCTGACGTGGTAGTTGGGAGTGCACTTGTTGACATGTATTCCAAATGTGGAAGACTAGATTATGCTTTGAGGTTTTTTAACACAATGCCTGTAAGAAATTCATATTCTTGGAACTCTATGATTTCGGGCTATGCACGACATGGGCAAGGAGAAGAAGCTTTGAAGCTTTTTGAAACTATGAAGCTCGATGGCCAAACACCACCTGACCATGTTACATTCGTGGGAGTCTTGTCAGCTTGTAGCCATGCGGGTCTGCTTGAAGAAGGGTTTAAACATTTCGAATCTATGAGTGATTCATATGGCTTAGCTCCTAGGATTGAACACTTCTCATGTATGGCTGACGTGCTAGGCCGTGCAGGTGAACTCGATAAGTTGGAAGATTTCATCGAGAAAATGCCAATGAAGCCTAATGTTCTCATCTGGAGGACTGTACTTGGGGCTTGTTGCAGAGCAAATGGTCGAAAAGCAGAATTAGGAAAGAAAGCAGCAGAAATGCTTTTTCAATTGGAGCCAGAAAACGCTGTAAACTATGTGCTACTTGGTAACATGTATGCTGCTGGAGGAAGATGGGAAGATTTAGTAAAGGCGAGAAAGAAAATGAAAGATGCAGATGTGAAAAAGGAAGCTGGTTATAGTTGGGTCACCATGAAGGATGGAGTCCATATGTTTGTTGCTGGGGATAAGTCACACCCAGACGCTGATGTGATCTACAAGAAGCTCAAGGAGCTCAACAGAAAGATGAGAGACGCAGGTTATGTGCCACAGACAGGATTTGCCTTGTATGATCTAGAGCAAGAGAACAAGGAAGAGATTCTGAGCTATCACAGCGAGAAGCTCGCTGTAGCTTTTGTTCTCGCAGCCCAGAGGAGCTCTACGCTGCCAATCAGAATAATGAAGAACCTCAGAGTTTGCGGTGATTGCCACTCTGCCTTCAAGTATATATCAAAGATCGAAGGGAGACAGATAATTCTAAGGGATTCAAACAGGTTTCATCATTTTCAAGACGGTGCATGTTCTTGTAGTGATTTCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

995

Amino Acids

110.77

Weight (kDa)

7.46

Isoelectric Point (pI)

38.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	66 - 112	1.5e-07	PPR repeat family
PPR_2	PF13041	169 - 217	1.6e-09	PPR repeat family
PPR_2	PF13041	583 - 630	9.6e-06	PPR repeat family
PPR_2	PF13041	684 - 732	5.3e-11	PPR repeat family
PPR	PF01535	686 - 715	1.1e-09	PPR repeat
E_motif	PF20431	807 - 865	2.5e-16	E motif
Eplus_motif	PF20430	871 - 898	9e-08	E+ motif
DYW_deaminase	PF14432	902 - 995	1.7e-38	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011231)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09950 AT5G09950 AT5G09950
fragaria_vesca	FvH4_6g40670
malus_domestica	MD09G1126300.v1.1
prunus_persica	Prupe.3G198300_v2.0.a1
pyrus_communis	pycom09g05060
rosa_chinensis	RchiOBHm_Chr2g0156061 RchiOBHm_Chr2g0156111
rosa_laevigata	RLG00000020884 RLG00000020888
rosa_multiflora	Rmu_sc0000260.1_g000021 Rmu_sc0011922.1_g000009
rosa_roxburghii	Rroxscaffold_2G00093230
rosa_rugosa	Rorug02G0451500
rosa_samantha	Rh2AG518400 Rh2BG529500 Rh2CG503100 Rh2DG538700
rosa_wichuraiana	Rw2G042680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2300
Acc36I	ACCTGC	2 cut(s)	2300, 2693
AccI	GTMKAC	1 cut(s)	108
AccII	CGCG	2 cut(s)	1277, 1883
AciI	CCGC	5 cut(s)	741, 821, 1086, 2201, 2865
AclWI	GGATC	1 cut(s)	564
AcoI	YGGCCR	1 cut(s)	2143
AcsI	RAATTY	5 cut(s)	375, 508, 523, 1453, 2050
AcuI	CTGAAG	1 cut(s)	1518
AfaI	GTAC	2 cut(s)	446, 2385
AfiI	CCNNNNNNNGG	3 cut(s)	1330, 1804, 2720
AflIII	ACRYGT	4 cut(s)	1012, 1108, 1986, 2499
AjiI	CACGTC	3 cut(s)	1109, 1960, 2296
AjnI	CCWGG	2 cut(s)	1145, 1237
AjuI	GAANNNNNNNTTGG	2 cut(s)	609, 641
Alw21I	GWGCWC	7 cut(s)	435, 698, 950, 1797, 1978, 2682, 2825
Alw26I	GTCTC	6 cut(s)	364, 1147, 1213, 1379, 2691, 2905
Alw44I	GTGCAC	2 cut(s)	694, 1974
AlwI	GGATC	1 cut(s)	564
AlwNI	CAGNNNCTG	1 cut(s)	2651
Ama87I	CYCGRG	2 cut(s)	680, 1774
AoxI	GGCC	5 cut(s)	382, 1060, 1806, 2143, 2302
ApaLI	GTGCAC	2 cut(s)	694, 1974
ApeKI	GCWGC	7 cut(s)	36, 56, 738, 2438, 2507, 2810, 2830
ApoI	RAATTY	5 cut(s)	375, 508, 523, 1453, 2050
Asp700I	GAANNNNTTC	1 cut(s)	2763
AspA2I	CCTAGG	1 cut(s)	2264
AspLEI	GCGC	4 cut(s)	1277, 1366, 1672, 1883
AsuHPI	GGTGA	9 cut(s)	161, 503, 760, 817, 1610, 1948, 2324, 2587, 2879
AsuII	TTCGAA	1 cut(s)	2232
AvaI	CYCGRG	2 cut(s)	680, 1774
AvrII	CCTAGG	1 cut(s)	2264
BaeGI	GKGCMC	2 cut(s)	698, 1978
BalI	TGGCCA	1 cut(s)	2145
BanII	GRGCYC	4 cut(s)	950, 1797, 2682, 2825
BbsI	GAAGAC	1 cut(s)	2011
Bbv12I	GWGCWC	7 cut(s)	435, 698, 950, 1797, 1978, 2682, 2825
BbvI	GCAGC	7 cut(s)	23, 43, 750, 2450, 2494, 2817, 2822
BccI	CCATC	7 cut(s)	593, 799, 1696, 1700, 2135, 2514, 2600
BceAI	ACGGC	5 cut(s)	1195, 1392, 1487, 1562, 2289
BcgI	CGANNNNNNTGC	2 cut(s)	1781, 1815
BciT130I	CCWGG	2 cut(s)	1147, 1239
BclI	TGATCA	2 cut(s)	1158, 1438
BcoDI	GTCTC	6 cut(s)	364, 1147, 1213, 1379, 2691, 2905
BfmI	CTRYAG	1 cut(s)	2793
BfuAI	ACCTGC	2 cut(s)	2300, 2693
BglII	AGATCT	2 cut(s)	563, 724
BisI	GCNGC	8 cut(s)	37, 57, 739, 1087, 2439, 2508, 2811, 2831
BlnI	CCTAGG	1 cut(s)	2264
BlpI	GCTNAGC	2 cut(s)	1265, 2257
BlsI	GCNGC	8 cut(s)	38, 58, 740, 1088, 2440, 2509, 2812, 2832
Bme1390I	CCNGG	2 cut(s)	1147, 1239
BmeT110I	CYCGRG	2 cut(s)	680, 1774
BmgBI	CACGTC	3 cut(s)	1109, 1960, 2296
BmiI	GGNNCC	1 cut(s)	2463
BmrFI	CCNGG	2 cut(s)	1147, 1239
BmrI	ACTGGG	1 cut(s)	1613
BmsI	GCATC	2 cut(s)	403, 2548
BmuI	ACTGGG	1 cut(s)	1613
BpiI	GAAGAC	1 cut(s)	2011
BplI	GAGNNNNNCTC	2 cut(s)	1308, 1340
BpmI	CTGGAG	2 cut(s)	2395, 2532
Bpu10I	CCTNAGC	1 cut(s)	944
Bpu1102I	GCTNAGC	2 cut(s)	1265, 2257
Bpu14I	TTCGAA	1 cut(s)	2232
BpuEI	CTTGAG	2 cut(s)	1310, 2657
BsaAI	YACGTR	2 cut(s)	167, 934
BsaI	GGTCTC	1 cut(s)	1379
BsaJI	CCNNGG	4 cut(s)	1503, 1803, 1809, 2264
Bsc4I	CCNNNNNNNGG	3 cut(s)	1330, 1804, 2720
Bse118I	RCCGGY	1 cut(s)	1388
Bse1I	ACTGG	5 cut(s)	452, 750, 1030, 1168, 1608
BseBI	CCWGG	2 cut(s)	1147, 1239
BseDI	CCNNGG	4 cut(s)	1503, 1803, 1809, 2264
BseGI	GGATG	4 cut(s)	418, 1583, 1711, 2611
BseLI	CCNNNNNNNGG	3 cut(s)	1330, 1804, 2720
BseMII	CTCAG	5 cut(s)	915, 935, 948, 2759, 2869
BseNI	ACTGG	5 cut(s)	452, 750, 1030, 1168, 1608
BseRI	GAGGAG	2 cut(s)	66, 2833
BseSI	GKGCMC	2 cut(s)	698, 1978
BseXI	GCAGC	7 cut(s)	23, 43, 750, 2450, 2494, 2817, 2822
BseYI	CCCAGC	2 cut(s)	551, 2627
BsgI	GTGCAG	2 cut(s)	147, 2328
Bsh1236I	CGCG	2 cut(s)	1277, 1883
BshFI	GGCC	5 cut(s)	384, 1062, 1808, 2145, 2304
BsiHKAI	GWGCWC	7 cut(s)	435, 698, 950, 1797, 1978, 2682, 2825
BsiHKCI	CYCGRG	2 cut(s)	680, 1774
BsiSI	CCGG	1 cut(s)	1389
BslI	CCNNNNNNNGG	3 cut(s)	1330, 1804, 2720
BsmAI	GTCTC	6 cut(s)	364, 1147, 1213, 1379, 2691, 2905
BsmBI	CGTCTC	2 cut(s)	1213, 2691
BsmI	GAATGC	2 cut(s)	1409, 1525
BsnI	GGCC	5 cut(s)	384, 1062, 1808, 2145, 2304
Bso31I	GGTCTC	1 cut(s)	1379
BsoBI	CYCGRG	2 cut(s)	680, 1774
Bsp119I	TTCGAA	1 cut(s)	2232
Bsp1286I	GDGCHC	7 cut(s)	435, 698, 950, 1797, 1978, 2682, 2825
Bsp1720I	GCTNAGC	2 cut(s)	1265, 2257
BspACI	CCGC	5 cut(s)	741, 821, 1086, 2201, 2865
BspANI	GGCC	5 cut(s)	384, 1062, 1808, 2145, 2304
BspCNI	CTCAG	5 cut(s)	916, 936, 949, 2760, 2868
BspFNI	CGCG	2 cut(s)	1277, 1883
BspHI	TCATGA	1 cut(s)	1122
BspLI	GGNNCC	1 cut(s)	2463
BspMI	ACCTGC	2 cut(s)	2300, 2693
BspPI	GGATC	1 cut(s)	564
BspT104I	TTCGAA	1 cut(s)	2232
BspTNI	GGTCTC	1 cut(s)	1379
BsrFI	RCCGGY	1 cut(s)	1388
BsrI	ACTGG	5 cut(s)	452, 750, 1030, 1168, 1608
BssAI	RCCGGY	1 cut(s)	1388
BssECI	CCNNGG	4 cut(s)	1503, 1803, 1809, 2264
BssT1I	CCWWGG	3 cut(s)	1803, 1809, 2264
Bst2UI	CCWGG	2 cut(s)	1147, 1239
Bst4CI	ACNGT	6 cut(s)	200, 1377, 1488, 1873, 2383, 2960
Bst6I	CTCTTC	2 cut(s)	1738, 2754
BstAPI	GCANNNNNTGC	1 cut(s)	413
BstBAI	YACGTR	2 cut(s)	167, 934
BstBI	TTCGAA	1 cut(s)	2232
BstC8I	GCNNGC	5 cut(s)	590, 1279, 1610, 1926, 2790
BstDSI	CCRYGG	1 cut(s)	1503
BstEII	GGTNACC	2 cut(s)	823, 2593
BstENI	CCTNNNNNAGG	1 cut(s)	1802
BstF5I	GGATG	4 cut(s)	418, 1583, 1711, 2611
BstFNI	CGCG	2 cut(s)	1277, 1883
BstHHI	GCGC	4 cut(s)	1277, 1366, 1672, 1883
BstMAI	GTCTC	6 cut(s)	364, 1147, 1213, 1379, 2691, 2905
BstNI	CCWGG	2 cut(s)	1147, 1239
BstNSI	RCATGY	6 cut(s)	592, 1016, 1928, 1990, 2503, 2967
BstPI	GGTNACC	2 cut(s)	823, 2593
BstSCI	CCNGG	2 cut(s)	1145, 1237
BstSFI	CTRYAG	1 cut(s)	2793
BstSLI	GKGCMC	2 cut(s)	698, 1978
BstUI	CGCG	2 cut(s)	1277, 1883
BstV1I	GCAGC	7 cut(s)	23, 43, 750, 2450, 2494, 2817, 2822
BstV2I	GAAGAC	1 cut(s)	2011
BstX2I	RGATCY	2 cut(s)	563, 724
BstXI	CCANNNNNNTGG	1 cut(s)	1810
BstYI	RGATCY	2 cut(s)	563, 724
BsuRI	GGCC	5 cut(s)	384, 1062, 1808, 2145, 2304
BtgI	CCRYGG	1 cut(s)	1503
BtrI	CACGTC	3 cut(s)	1109, 1960, 2296
BtsCI	GGATG	4 cut(s)	418, 1583, 1711, 2611
BtsI	GCAGTG	1 cut(s)	414
BtsIMutI	CAGTG	5 cut(s)	414, 1161, 1250, 1373, 1659
BveI	ACCTGC	2 cut(s)	2300, 2693
Cac8I	GCNNGC	5 cut(s)	590, 1279, 1610, 1926, 2790
CaiI	CAGNNNCTG	1 cut(s)	2651
CciI	TCATGA	1 cut(s)	1122
CfoI	GCGC	4 cut(s)	1277, 1366, 1672, 1883
Cfr10I	RCCGGY	1 cut(s)	1388
CseI	GACGC	3 cut(s)	1109, 2657, 2708
Csp6I	GTAC	2 cut(s)	445, 2384
CviQI	GTAC	2 cut(s)	445, 2384
DraI	TTTAAA	2 cut(s)	1632, 2224
EaeI	YGGCCR	1 cut(s)	2143
Eam1104I	CTCTTC	2 cut(s)	1738, 2754
EarI	CTCTTC	2 cut(s)	1738, 2754
Ecl136II	GAGCTC	4 cut(s)	948, 1795, 2680, 2823
Eco130I	CCWWGG	3 cut(s)	1803, 1809, 2264
Eco147I	AGGCCT	1 cut(s)	1808
Eco24I	GRGCYC	4 cut(s)	950, 1797, 2682, 2825
Eco31I	GGTCTC	1 cut(s)	1379
Eco53kI	GAGCTC	4 cut(s)	948, 1795, 2680, 2823
Eco57I	CTGAAG	1 cut(s)	1518
Eco88I	CYCGRG	2 cut(s)	680, 1774
Eco91I	GGTNACC	2 cut(s)	823, 2593
EcoICRI	GAGCTC	4 cut(s)	948, 1795, 2680, 2823
EcoNI	CCTNNNNNAGG	1 cut(s)	1802
EcoO65I	GGTNACC	2 cut(s)	823, 2593
EcoRI	GAATTC	3 cut(s)	508, 523, 1453
EcoRII	CCWGG	2 cut(s)	1145, 1237
EcoT14I	CCWWGG	3 cut(s)	1803, 1809, 2264
EcoT38I	GRGCYC	4 cut(s)	950, 1797, 2682, 2825
ErhI	CCWWGG	3 cut(s)	1803, 1809, 2264
Esp3I	CGTCTC	2 cut(s)	1213, 2691
FauI	CCCGC	1 cut(s)	2194
FauNDI	CATATG	2 cut(s)	2251, 2616
FbaI	TGATCA	2 cut(s)	1158, 1438
FblI	GTMKAC	1 cut(s)	108
Fnu4HI	GCNGC	8 cut(s)	37, 57, 739, 1087, 2439, 2508, 2811, 2831
FokI	GGATG	4 cut(s)	425, 1570, 1718, 2618
FriOI	GRGCYC	4 cut(s)	950, 1797, 2682, 2825
Fsp4HI	GCNGC	8 cut(s)	37, 57, 739, 1087, 2439, 2508, 2811, 2831
GlaI	GCGC	4 cut(s)	1276, 1365, 1671, 1882
GluI	GCNGC	8 cut(s)	37, 57, 739, 1087, 2439, 2508, 2811, 2831
GsaI	CCCAGC	2 cut(s)	555, 2631
GsuI	CTGGAG	2 cut(s)	2395, 2532
HaeIII	GGCC	5 cut(s)	384, 1062, 1808, 2145, 2304
HapII	CCGG	1 cut(s)	1389
HgaI	GACGC	3 cut(s)	1109, 2657, 2708
HhaI	GCGC	4 cut(s)	1277, 1366, 1672, 1883
Hin6I	GCGC	4 cut(s)	1275, 1364, 1670, 1881
HinP1I	GCGC	4 cut(s)	1275, 1364, 1670, 1881
HincII	GTYRAC	2 cut(s)	1036, 1984
HindII	GTYRAC	2 cut(s)	1036, 1984
HindIII	AAGCTT	3 cut(s)	255, 2109, 2117
HpaII	CCGG	1 cut(s)	1389
HphI	GGTGA	9 cut(s)	161, 503, 760, 817, 1610, 1948, 2324, 2587, 2879
Hpy166II	GTNNAC	8 cut(s)	109, 696, 1036, 1601, 1976, 1984, 2315, 2479
Hpy8I	GTNNAC	8 cut(s)	109, 696, 1036, 1601, 1976, 1984, 2315, 2479
HpyAV	CCTTC	6 cut(s)	281, 784, 2210, 2596, 2893, 2900
HpyCH4III	ACNGT	6 cut(s)	200, 1377, 1488, 1873, 2383, 2960
HpyCH4IV	ACGT	5 cut(s)	166, 933, 1108, 1959, 2295
HpySE526I	ACGT	5 cut(s)	166, 933, 1108, 1959, 2295
HspAI	GCGC	4 cut(s)	1275, 1364, 1670, 1881
Ksp22I	TGATCA	2 cut(s)	1158, 1438
LmnI	GCTCC	7 cut(s)	53, 1466, 1800, 2266, 2461, 2677, 2820
Lsp1109I	GCAGC	7 cut(s)	23, 43, 750, 2450, 2494, 2817, 2822
LweI	GCATC	2 cut(s)	403, 2548
MaeII	ACGT	5 cut(s)	166, 933, 1108, 1959, 2295
MaeIII	GTNAC	8 cut(s)	491, 637, 823, 1753, 2164, 2495, 2593, 2637
MfeI	CAATTG	1 cut(s)	2456
MflI	RGATCY	2 cut(s)	563, 724
MhlI	GDGCHC	7 cut(s)	435, 698, 950, 1797, 1978, 2682, 2825
MlsI	TGGCCA	1 cut(s)	2145
MluNI	TGGCCA	1 cut(s)	2145
MlyI	GAGTC	3 cut(s)	935, 2187, 2619
MmeI	TCCRAC	2 cut(s)	22, 2307
Mox20I	TGGCCA	1 cut(s)	2145
MroXI	GAANNNNTTC	1 cut(s)	2763
MscI	TGGCCA	1 cut(s)	2145
MseI	TTAA	9 cut(s)	282, 504, 798, 830, 1068, 1545, 1631, 2031, 2223
MslI	CAYNNNNRTG	2 cut(s)	440, 1011
Msp20I	TGGCCA	1 cut(s)	2145
MspA1I	CMGCKG	1 cut(s)	741
MspI	CCGG	1 cut(s)	1389
MspR9I	CCNGG	2 cut(s)	1147, 1239
MssI	GTTTAAAC	1 cut(s)	2224
MunI	CAATTG	1 cut(s)	2456
Mva1269I	GAATGC	2 cut(s)	1409, 1525
MvaI	CCWGG	2 cut(s)	1147, 1239
MvnI	CGCG	2 cut(s)	1277, 1883
NdeI	CATATG	2 cut(s)	2251, 2616
NlaIV	GGNNCC	1 cut(s)	2463
NmuCI	GTSAC	4 cut(s)	491, 823, 2593, 2637
NspI	RCATGY	6 cut(s)	592, 1016, 1928, 1990, 2503, 2967
NspV	TTCGAA	1 cut(s)	2232
PaeI	GCATGC	2 cut(s)	592, 1928
PaeR7I	CTCGAG	1 cut(s)	680
PagI	TCATGA	1 cut(s)	1122
PaqCI	CACCTGC	1 cut(s)	2300
PceI	AGGCCT	1 cut(s)	1808
PciI	ACATGT	3 cut(s)	1012, 1986, 2499
PctI	GAATGC	2 cut(s)	1409, 1525
PdmI	GAANNNNTTC	1 cut(s)	2763
PfoI	TCCNGGA	1 cut(s)	1145
PkrI	GCNGC	8 cut(s)	38, 58, 740, 1088, 2440, 2509, 2812, 2832
PleI	GAGTC	3 cut(s)	934, 2186, 2618
PmeI	GTTTAAAC	1 cut(s)	2224
PpsI	GAGTC	3 cut(s)	934, 2186, 2618
Ppu21I	YACGTR	2 cut(s)	167, 934
PscI	ACATGT	3 cut(s)	1012, 1986, 2499
Psp124BI	GAGCTC	4 cut(s)	950, 1797, 2682, 2825
Psp6I	CCWGG	2 cut(s)	1145, 1237
PspEI	GGTNACC	2 cut(s)	823, 2593
PspFI	CCCAGC	2 cut(s)	551, 2627
PspGI	CCWGG	2 cut(s)	1145, 1237
PspN4I	GGNNCC	1 cut(s)	2463
PspXI	VCTCGAGB	1 cut(s)	680
PsrI	GAACNNNNNNTAC	4 cut(s)	1476, 1508, 2787, 2819
PstNI	CAGNNNCTG	1 cut(s)	2651
PsuI	RGATCY	2 cut(s)	563, 724
RsaI	GTAC	2 cut(s)	446, 2385
RsaNI	GTAC	2 cut(s)	445, 2384
RseI	CAYNNNNRTG	2 cut(s)	440, 1011
SacI	GAGCTC	4 cut(s)	950, 1797, 2682, 2825
SaqAI	TTAA	9 cut(s)	282, 504, 798, 830, 1068, 1545, 1631, 2031, 2223
SatI	GCNGC	8 cut(s)	37, 57, 739, 1087, 2439, 2508, 2811, 2831
SchI	GAGTC	3 cut(s)	935, 2187, 2619
ScrFI	CCNGG	2 cut(s)	1147, 1239
SduI	GDGCHC	7 cut(s)	435, 698, 950, 1797, 1978, 2682, 2825
SfaNI	GCATC	2 cut(s)	403, 2548
SfcI	CTRYAG	1 cut(s)	2793
Sfr274I	CTCGAG	1 cut(s)	680
SfuI	TTCGAA	1 cut(s)	2232
SlaI	CTCGAG	1 cut(s)	680
SmiMI	CAYNNNNRTG	2 cut(s)	440, 1011
SmlI	CTYRAG	3 cut(s)	680, 1325, 2672
SmoI	CTYRAG	3 cut(s)	680, 1325, 2672
SphI	GCATGC	2 cut(s)	592, 1928
SseBI	AGGCCT	1 cut(s)	1808
SsiI	CCGC	5 cut(s)	741, 821, 1086, 2201, 2865
SspI	AATATT	1 cut(s)	1642
SstI	GAGCTC	4 cut(s)	950, 1797, 2682, 2825
StuI	AGGCCT	1 cut(s)	1808
StyD4I	CCNGG	2 cut(s)	1145, 1237
StyI	CCWWGG	3 cut(s)	1803, 1809, 2264
TaaI	ACNGT	6 cut(s)	200, 1377, 1488, 1873, 2383, 2960
TaiI	ACGT	5 cut(s)	169, 936, 1111, 1962, 2298
TaqI	TCGA	8 cut(s)	527, 681, 2139, 2232, 2319, 2340, 2413, 2904
TaqII	GACCGA	1 cut(s)	1142
TatI	WGTACW	2 cut(s)	444, 2383
TauI	GCSGC	1 cut(s)	1089
Tru1I	TTAA	9 cut(s)	282, 504, 798, 830, 1068, 1545, 1631, 2031, 2223
Tru9I	TTAA	9 cut(s)	282, 504, 798, 830, 1068, 1545, 1631, 2031, 2223
TscAI	CASTG	5 cut(s)	414, 1168, 1257, 1380, 1666
TseFI	GTSAC	4 cut(s)	491, 823, 2593, 2637
TseI	GCWGC	7 cut(s)	36, 56, 738, 2438, 2507, 2810, 2830
Tsp45I	GTSAC	4 cut(s)	491, 823, 2593, 2637
TspGWI	ACGGA	1 cut(s)	1635
TspRI	CASTG	5 cut(s)	414, 1168, 1257, 1380, 1666
VneI	GTGCAC	2 cut(s)	694, 1974
XagI	CCTNNNNNAGG	1 cut(s)	1802
XapI	RAATTY	5 cut(s)	375, 508, 523, 1453, 2050
XbaI	TCTAGA	3 cut(s)	605, 1727, 2740
XceI	RCATGY	6 cut(s)	592, 1016, 1928, 1990, 2503, 2967
XhoI	CTCGAG	1 cut(s)	680
XmaJI	CCTAGG	1 cut(s)	2264
XmiI	GTMKAC	1 cut(s)	108
XmnI	GAANNNNTTC	1 cut(s)	2763

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.