AT5G12440

Zinc finger CCCH domain-containing protein 55-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0002653
Physical Location & Seq
Reverse (-)
4035181 .. 4042254
7074 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G12440.11

Sequence Viewer

Length: 1953 bp
ATGGATTCCGGTGACGCGACATCTTTGCTTTTGACGAAAATTCGAAGCTTGGAGCCAGATTATGCTCCTAAGATTATTGGGTATTTGCTTTTACATGATTTTGGTGATAGAGACTTGATGCATCTGGCTCGTGGACCTGAATCGATTTTGCAGTCGACTATTTCGAAAGTGAAGAGTCTCTTGGGGATTTTCTCCAACAACTCGCCTTCTTCTACTCCGACGTCTCCTTCTCCGTTGAATCCTATCTGTCGTCCTCCTCTTAACGGAAGAGGAAGCTCTCACTCCAATGGGTTTATGGATTTCCGTAGAAACTCTCCGTCTTCTCCTTCTTCTACCTCTCCTTGGTCATTCAACAACTGTATCAACGGTAATAATGGGAATAACCCCCACATTTCCCCTAAACACACTCCGATCTCGAAACCCTTTAGCTCTCACCAAAGCAATGGACTTTCTGCTACACATTCTGGTAGTGCTGACGCTGCTGGTGGTGCTGATTTACTTGATGATCAGCAGCTTAATGATTGCCTTTCGTTTCTCGACGATTCTTGTTCTAAAACCGAGGATCTTGTGGATCCTAGCATTCCTTTGGATTACTCTGTAGATGGTGATGGTGAAACCCATCTGCACAGGAGGAGTTTCTCTTGTGATGCGTCTTTTGTGTCCGGAGATGATGGATTTGGTGGTGGATGCAAACCATGTGTGTATTTTAGTAGAGGTTTGTGCAAGAATGGAGAAAGCTGCAAGTTTATCCACGGTGGATATCCGGATAATATGGATGGTAATGGCATTGTCGCTGACTCGCCTAGGAAAATGGAGAACTTTGTTAGGCAGCACGAGGAGATGATGAGGCTGAAATTGGCTTACCAGCAGCAGAGGTTGGCTTCTCAAATCCTGGGTCGGGCTCCCCAGTTGCCATACGAGAAAAGAATGGACTTTCTCTTGCAGCAGCATGCTCAAAGAGATGGTGGACTGCCTTTTGGTGATGAAAGATTTTGGAGCAGCAGCCCAGGACGGCTTGAGAGGATGGAGCTGGCAATGCATTTAGGTGATCAGTCAAATTCGGCATCTAGACAGATTTACTTGACATTCCCAGCTGACAGCACGTTTAAGGATGAGGATGTTGCTACATATTTCAGCCTCTTTGGAACAGTCCAAGATGTGCGGATCCCATACCAACAGAAGCGTATGTTTGGCTTTGTTTCATTTGCTCATCCCGAGACAGTGAAAGTTGTACTAGCTAGAGGGAATCCCCATTTCATTTGCGACTCACGGGTTCTTGTCAAACCTTACAAAGAAAAAGGCAAAGTCTTGGACAAGAAGCAACAGCAACTGCTACAACAGCAGATTGAGCGAGGAAATTACTCCCCGTGCTCCAGTCCATCTGGGATTGATCCTAGAGAACAGTCTGATTTCCACCTTGGTTCAAAGATGTTGTATGAGAGACGTGAGATGATGAGAAGGAAAATAGAGCAGGCTGATCTCCTGAGGGCTATTGAACTCGAAAGAAGACGTTTCATTAATTTACAGCTTCCTGAGTTCAAGAATAGTGTAACGCTGAATCATCACCGTAGCTTTTCTGTGGGGTCTCCTGGTTATTTTTCATCTGCCGGCAATCAAAGCCCTGATTTTCAATCTGAACTTAACGGTGCAGATGCTTTAAAAGTAACTGATGATACCTTGGAGCTGCATCCTTACCCAGTAGTCAACCCAATGAGTGTTAACAATAGCTACTCAAACGGTGCAAAAGAAGAGACTAACAAGAGTGAATTGCTTGATCCCGATTCTGGAAGCACCATTGAGCTTGTTCTTCCTAGTAACCTCTTCCCTTCTGCATCATCTACCGATGATCACAAAACCGATGATTCTGCTGAAACTAATGCAAAAGTTGGAGTCTCCTCTACTAATGAAAATGACCATGAACCACCAGTCACTACCAATAATCTGATGCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1 zf-CCCH

Protein Analysis

650

Amino Acids

71.96

Weight (kDa)

5.79

Isoelectric Point (pI)

54.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PABC_AtC3H46 PF23182 1 - 65 1.3e-22 AtC3H46 PABC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 224
AccI GTMKAC 1 cut(s) 155
AccII CGCG 1 cut(s) 17
AccIII TCCGGA 2 cut(s) 662, 763
AciI CCGC 1 cut(s) 1162
AclWI GGATC 7 cut(s) 566, 570, 579, 1159, 1172, 1385, 1769
AcsI RAATTY 2 cut(s) 39, 1057
AcyI GRCGYC 1 cut(s) 221
AfaI GTAC 1 cut(s) 1233
AfiI CCNNNNNNNGG 4 cut(s) 263, 342, 898, 1784
AgsI TTSAA 6 cut(s) 238, 352, 1425, 1496, 1540, 1631
AjiI CACGTC 1 cut(s) 1445
AjnI CCWGG 3 cut(s) 891, 1006, 1588
AjuI GAANNNNNNNTTGG 2 cut(s) 164, 196
Alw21I GWGCWC 1 cut(s) 1373
Alw26I GTCTC 8 cut(s) 105, 182, 228, 1211, 1435, 1590, 1745, 1897
AlwI GGATC 7 cut(s) 566, 570, 579, 1159, 1172, 1385, 1769
AlwNI CAGNNNCTG 1 cut(s) 1330
Ama87I CYCGRG 1 cut(s) 1214
Aor13HI TCCGGA 2 cut(s) 662, 763
ApoI RAATTY 2 cut(s) 39, 1057
ArsI GACNNNNNNTTYG 2 cut(s) 880, 912
AseI ATTAAT 1 cut(s) 1518
AspA2I CCTAGG 1 cut(s) 803
AspS9I GGNCC 1 cut(s) 134
AsuHPI GGTGA 8 cut(s) 23, 116, 425, 617, 623, 992, 1058, 1556
AsuII TTCGAA 2 cut(s) 43, 164
AvaI CYCGRG 1 cut(s) 1214
AvaII GGWCC 1 cut(s) 134
AvrII CCTAGG 1 cut(s) 803
AxyI CCTNAGG 1 cut(s) 1484
BaeI ACNNNNGTAYC 2 cut(s) 343, 376
BamHI GGATCC 2 cut(s) 571, 1164
BanII GRGCYC 1 cut(s) 904
BauI CACGAG 2 cut(s) 129, 833
BbsI GAAGAC 2 cut(s) 312, 1513
Bbv12I GWGCWC 1 cut(s) 1373
BccI CCATC 8 cut(s) 596, 602, 627, 665, 770, 956, 1018, 1387
BceAI ACGGC 1 cut(s) 1028
BcgI CGANNNNNNTGC 6 cut(s) 7, 41, 110, 144, 1847, 1881
BciT130I CCWGG 3 cut(s) 893, 1008, 1590
BclI TGATCA 3 cut(s) 505, 1048, 1846
BcoDI GTCTC 8 cut(s) 105, 182, 228, 1211, 1435, 1590, 1745, 1897
BfaI CTAG 7 cut(s) 576, 804, 1068, 1235, 1239, 1395, 1812
BfmI CTRYAG 1 cut(s) 597
BlnI CCTAGG 1 cut(s) 803
Bme1390I CCNGG 3 cut(s) 893, 1008, 1590
Bme18I GGWCC 1 cut(s) 134
BmeT110I CYCGRG 1 cut(s) 1214
BmgBI CACGTC 1 cut(s) 1445
BmgT120I GGNCC 1 cut(s) 134
BmiI GGNNCC 4 cut(s) 54, 573, 903, 1166
BmrFI CCNGG 3 cut(s) 893, 1008, 1590
BmrI ACTGGG 2 cut(s) 901, 1691
BmsI GCATC 9 cut(s) 108, 130, 637, 677, 1073, 1642, 1696, 1841, 1935
BmuI ACTGGG 2 cut(s) 901, 1691
BpiI GAAGAC 2 cut(s) 312, 1513
BpmI CTGGAG 1 cut(s) 1357
Bpu14I TTCGAA 2 cut(s) 43, 164
BpuEI CTTGAG 1 cut(s) 1037
Bsa29I ATCGAT 1 cut(s) 143
BsaHI GRCGYC 1 cut(s) 221
BsaI GGTCTC 1 cut(s) 1590
BsaJI CCNNGG 8 cut(s) 341, 558, 751, 803, 892, 1006, 1417, 1677
BsaWI WCCGGW 3 cut(s) 8, 662, 763
Bsc4I CCNNNNNNNGG 4 cut(s) 263, 342, 898, 1784
Bse118I RCCGGY 1 cut(s) 1607
Bse1I ACTGG 4 cut(s) 907, 1374, 1697, 1925
Bse21I CCTNAGG 1 cut(s) 1484
Bse3DI GCAATG 2 cut(s) 448, 1041
BseAI TCCGGA 2 cut(s) 662, 763
BseBI CCWGG 3 cut(s) 893, 1008, 1590
BseCI ATCGAT 1 cut(s) 143
BseDI CCNNGG 8 cut(s) 341, 558, 751, 803, 892, 1006, 1417, 1677
BseGI GGATG 7 cut(s) 692, 781, 1029, 1117, 1123, 1210, 1687
BseLI CCNNNNNNNGG 4 cut(s) 263, 342, 898, 1784
BseMI GCAATG 2 cut(s) 448, 1041
BseMII CTCAG 2 cut(s) 1475, 1524
BseNI ACTGG 4 cut(s) 907, 1374, 1697, 1925
BseRI GAGGAG 4 cut(s) 246, 646, 851, 1885
BseYI CCCAGC 1 cut(s) 1090
BsgI GTGCAG 2 cut(s) 608, 1668
Bsh1236I CGCG 1 cut(s) 17
BshVI ATCGAT 1 cut(s) 143
BsiHKAI GWGCWC 1 cut(s) 1373
BsiHKCI CYCGRG 1 cut(s) 1214
BsiSI CCGG 4 cut(s) 9, 663, 764, 1608
BslI CCNNNNNNNGG 4 cut(s) 263, 342, 898, 1784
BsmAI GTCTC 8 cut(s) 105, 182, 228, 1211, 1435, 1590, 1745, 1897
BsmBI CGTCTC 2 cut(s) 228, 1435
BsmI GAATGC 1 cut(s) 579
Bso31I GGTCTC 1 cut(s) 1590
BsoBI CYCGRG 1 cut(s) 1214
Bsp119I TTCGAA 2 cut(s) 43, 164
Bsp1286I GDGCHC 2 cut(s) 904, 1373
Bsp13I TCCGGA 2 cut(s) 662, 763
BspACI CCGC 1 cut(s) 1162
BspCNI CTCAG 2 cut(s) 1476, 1525
BspDI ATCGAT 1 cut(s) 143
BspEI TCCGGA 2 cut(s) 662, 763
BspFNI CGCG 1 cut(s) 17
BspLI GGNNCC 4 cut(s) 54, 573, 903, 1166
BspPI GGATC 7 cut(s) 566, 570, 579, 1159, 1172, 1385, 1769
BspT104I TTCGAA 2 cut(s) 43, 164
BspTNI GGTCTC 1 cut(s) 1590
BsrDI GCAATG 2 cut(s) 448, 1041
BsrFI RCCGGY 1 cut(s) 1607
BsrI ACTGG 4 cut(s) 907, 1374, 1697, 1925
BssAI RCCGGY 1 cut(s) 1607
BssECI CCNNGG 8 cut(s) 341, 558, 751, 803, 892, 1006, 1417, 1677
BssNI GRCGYC 1 cut(s) 221
BssSI CACGAG 2 cut(s) 129, 833
BssT1I CCWWGG 4 cut(s) 341, 803, 1417, 1677
Bst2BI CACGAG 2 cut(s) 129, 833
Bst2UI CCWGG 3 cut(s) 893, 1008, 1590
Bst4CI ACNGT 9 cut(s) 359, 368, 755, 1150, 1222, 1404, 1568, 1646, 1739
Bst6I CTCTTC 4 cut(s) 167, 262, 1743, 1826
BstACI GRCGYC 1 cut(s) 221
BstBI TTCGAA 2 cut(s) 43, 164
BstC8I GCNNGC 4 cut(s) 951, 1032, 1473, 1609
BstDEI CTNAG 3 cut(s) 69, 1484, 1533
BstDSI CCRYGG 1 cut(s) 751
BstF5I GGATG 7 cut(s) 692, 781, 1029, 1117, 1123, 1210, 1687
BstFNI CGCG 1 cut(s) 17
BstMAI GTCTC 8 cut(s) 105, 182, 228, 1211, 1435, 1590, 1745, 1897
BstMWI GCNNNNNNNGC 6 cut(s) 479, 488, 1036, 1339, 1348, 1617
BstNI CCWGG 3 cut(s) 893, 1008, 1590
BstNSI RCATGY 1 cut(s) 953
BstSCI CCNGG 3 cut(s) 891, 1006, 1588
BstSFI CTRYAG 1 cut(s) 597
BstUI CGCG 1 cut(s) 17
BstV2I GAAGAC 2 cut(s) 312, 1513
BstX2I RGATCY 3 cut(s) 562, 571, 1164
BstXI CCANNNNNNTGG 1 cut(s) 443
BstYI RGATCY 3 cut(s) 562, 571, 1164
Bsu15I ATCGAT 1 cut(s) 143
Bsu36I CCTNAGG 1 cut(s) 1484
BsuTUI ATCGAT 1 cut(s) 143
BtgI CCRYGG 1 cut(s) 751
BtrI CACGTC 1 cut(s) 1445
BtsCI GGATG 7 cut(s) 692, 781, 1029, 1117, 1123, 1210, 1687
BtsIMutI CAGTG 1 cut(s) 1227
Cac8I GCNNGC 4 cut(s) 951, 1032, 1473, 1609
CaiI CAGNNNCTG 1 cut(s) 1330
Cfr10I RCCGGY 1 cut(s) 1607
Cfr13I GGNCC 1 cut(s) 134
ClaI ATCGAT 1 cut(s) 143
CseI GACGC 3 cut(s) 23, 485, 639
Csp6I GTAC 1 cut(s) 1232
CviAII CATG 4 cut(s) 95, 696, 950, 1916
CviQI GTAC 1 cut(s) 1232
DdeI CTNAG 3 cut(s) 69, 1484, 1533
DraI TTTAAA 1 cut(s) 1659
Eam1104I CTCTTC 4 cut(s) 167, 262, 1743, 1826
EarI CTCTTC 4 cut(s) 167, 262, 1743, 1826
Eco130I CCWWGG 4 cut(s) 341, 803, 1417, 1677
Eco24I GRGCYC 1 cut(s) 904
Eco31I GGTCTC 1 cut(s) 1590
Eco32I GATATC 1 cut(s) 761
Eco47I GGWCC 1 cut(s) 134
Eco81I CCTNAGG 1 cut(s) 1484
Eco88I CYCGRG 1 cut(s) 1214
EcoRII CCWGG 3 cut(s) 891, 1006, 1588
EcoRV GATATC 1 cut(s) 761
EcoT14I CCWWGG 4 cut(s) 341, 803, 1417, 1677
EcoT22I ATGCAT 2 cut(s) 123, 1041
EcoT38I GRGCYC 1 cut(s) 904
ErhI CCWWGG 4 cut(s) 341, 803, 1417, 1677
Esp3I CGTCTC 2 cut(s) 228, 1435
FaeI CATG 4 cut(s) 98, 699, 953, 1919
FalI AAGNNNNNCTT 2 cut(s) 164, 196
FatI CATG 4 cut(s) 94, 695, 949, 1915
FbaI TGATCA 3 cut(s) 505, 1048, 1846
FblI GTMKAC 1 cut(s) 155
FokI GGATG 7 cut(s) 699, 788, 1036, 1124, 1130, 1197, 1674
FriOI GRGCYC 1 cut(s) 904
FspBI CTAG 7 cut(s) 576, 804, 1068, 1235, 1239, 1395, 1812
GsaI CCCAGC 1 cut(s) 1094
GsuI CTGGAG 1 cut(s) 1357
HapII CCGG 4 cut(s) 9, 663, 764, 1608
HgaI GACGC 3 cut(s) 23, 485, 639
Hin1I GRCGYC 1 cut(s) 221
Hin1II CATG 4 cut(s) 98, 699, 953, 1919
HincII GTYRAC 3 cut(s) 156, 1705, 1720
HindII GTYRAC 3 cut(s) 156, 1705, 1720
HindIII AAGCTT 1 cut(s) 46
HpaI GTTAAC 1 cut(s) 1720
HpaII CCGG 4 cut(s) 9, 663, 764, 1608
HphI GGTGA 8 cut(s) 23, 116, 425, 617, 623, 992, 1058, 1556
Hpy166II GTNNAC 5 cut(s) 134, 156, 968, 1705, 1720
Hpy188I TCNGA 5 cut(s) 219, 411, 1408, 1636, 1944
Hpy8I GTNNAC 5 cut(s) 134, 156, 968, 1705, 1720
Hpy99I CGWCG 2 cut(s) 223, 542
HpyAV CCTTC 5 cut(s) 216, 237, 336, 1452, 1836
HpyCH4III ACNGT 9 cut(s) 359, 368, 755, 1150, 1222, 1404, 1568, 1646, 1739
HpyCH4IV ACGT 4 cut(s) 221, 1103, 1444, 1510
HpyF10VI GCNNNNNNNGC 6 cut(s) 479, 488, 1036, 1339, 1348, 1617
HpyF3I CTNAG 3 cut(s) 69, 1484, 1533
HpySE526I ACGT 4 cut(s) 221, 1103, 1444, 1510
Hsp92I GRCGYC 1 cut(s) 221
Hsp92II CATG 4 cut(s) 98, 699, 953, 1919
Kpn2I TCCGGA 2 cut(s) 662, 763
KroI GCCGGC 1 cut(s) 1607
KroNI GCCGGC 1 cut(s) 1609
Ksp22I TGATCA 3 cut(s) 505, 1048, 1846
KspAI GTTAAC 1 cut(s) 1720
LmnI GCTCC 7 cut(s) 52, 70, 907, 996, 1027, 1376, 1681
LweI GCATC 9 cut(s) 108, 130, 637, 677, 1073, 1642, 1696, 1841, 1935
MaeI CTAG 7 cut(s) 576, 804, 1068, 1235, 1239, 1395, 1812
MaeII ACGT 4 cut(s) 221, 1103, 1444, 1510
MaeIII GTNAC 5 cut(s) 11, 1549, 1663, 1814, 1927
MboII GAAGA 9 cut(s) 184, 201, 279, 312, 321, 1518, 1760, 1799, 1813
MflI RGATCY 3 cut(s) 562, 571, 1164
MhlI GDGCHC 2 cut(s) 904, 1373
MluCI AATT 6 cut(s) 39, 854, 1057, 1357, 1519, 1766
MlyI GAGTC 4 cut(s) 184, 791, 1259, 1899
MmeI TCCRAC 3 cut(s) 219, 242, 1867
Mph1103I ATGCAT 2 cut(s) 123, 1041
MroI TCCGGA 2 cut(s) 662, 763
MroNI GCCGGC 1 cut(s) 1607
MseI TTAA 7 cut(s) 261, 516, 1107, 1518, 1641, 1658, 1719
MslI CAYNNNNRTG 2 cut(s) 285, 1044
MspA1I CMGCKG 1 cut(s) 1094
MspI CCGG 4 cut(s) 9, 663, 764, 1608
MspR9I CCNGG 3 cut(s) 893, 1008, 1590
Mva1269I GAATGC 1 cut(s) 579
MvaI CCWGG 3 cut(s) 893, 1008, 1590
MvnI CGCG 1 cut(s) 17
MwoI GCNNNNNNNGC 6 cut(s) 479, 488, 1036, 1339, 1348, 1617
NaeI GCCGGC 1 cut(s) 1609
NgoMIV GCCGGC 1 cut(s) 1607
NlaIII CATG 4 cut(s) 98, 699, 953, 1919
NlaIV GGNNCC 4 cut(s) 54, 573, 903, 1166
NmuCI GTSAC 2 cut(s) 11, 1927
NsiI ATGCAT 2 cut(s) 123, 1041
NspI RCATGY 1 cut(s) 953
NspV TTCGAA 2 cut(s) 43, 164
PaeI GCATGC 1 cut(s) 953
PcsI WCGNNNNNNNCGW 1 cut(s) 161
PctI GAATGC 1 cut(s) 579
PdiI GCCGGC 1 cut(s) 1609
PfeI GAWTC 8 cut(s) 5, 140, 238, 542, 1246, 1558, 1781, 1862
PleI GAGTC 4 cut(s) 183, 791, 1259, 1898
PpsI GAGTC 4 cut(s) 183, 791, 1259, 1898
PshBI ATTAAT 1 cut(s) 1518
Psp6I CCWGG 3 cut(s) 891, 1006, 1588
PspFI CCCAGC 1 cut(s) 1090
PspGI CCWGG 3 cut(s) 891, 1006, 1588
PspN4I GGNNCC 4 cut(s) 54, 573, 903, 1166
PspPI GGNCC 1 cut(s) 134
PstNI CAGNNNCTG 1 cut(s) 1330
PsuI RGATCY 3 cut(s) 562, 571, 1164
PvuII CAGCTG 1 cut(s) 1094
RsaI GTAC 1 cut(s) 1233
RsaNI GTAC 1 cut(s) 1232
RseI CAYNNNNRTG 2 cut(s) 285, 1044
SalI GTCGAC 1 cut(s) 154
SaqAI TTAA 7 cut(s) 261, 516, 1107, 1518, 1641, 1658, 1719
Sau96I GGNCC 1 cut(s) 134
SchI GAGTC 4 cut(s) 184, 791, 1259, 1899
ScrFI CCNGG 3 cut(s) 893, 1008, 1590
SduI GDGCHC 2 cut(s) 904, 1373
SfaNI GCATC 9 cut(s) 108, 130, 637, 677, 1073, 1642, 1696, 1841, 1935
SfcI CTRYAG 1 cut(s) 597
SfuI TTCGAA 2 cut(s) 43, 164
SinI GGWCC 1 cut(s) 134
SmiMI CAYNNNNRTG 2 cut(s) 285, 1044
SmlI CTYRAG 1 cut(s) 1016
SmoI CTYRAG 1 cut(s) 1016
SphI GCATGC 1 cut(s) 953
Sse9I AATT 6 cut(s) 39, 854, 1057, 1357, 1519, 1766
SsiI CCGC 1 cut(s) 1162
SspMI CTAG 7 cut(s) 576, 804, 1068, 1235, 1239, 1395, 1812
StyD4I CCNGG 3 cut(s) 891, 1006, 1588
StyI CCWWGG 4 cut(s) 341, 803, 1417, 1677
TaaI ACNGT 9 cut(s) 359, 368, 755, 1150, 1222, 1404, 1568, 1646, 1739
TaiI ACGT 4 cut(s) 224, 1106, 1447, 1513
TaqI TCGA 7 cut(s) 43, 143, 155, 164, 416, 537, 1500
TasI AATT 6 cut(s) 39, 854, 1057, 1357, 1519, 1766
TatI WGTACW 1 cut(s) 1231
TfiI GAWTC 8 cut(s) 5, 140, 238, 542, 1246, 1558, 1781, 1862
Tru1I TTAA 7 cut(s) 261, 516, 1107, 1518, 1641, 1658, 1719
Tru9I TTAA 7 cut(s) 261, 516, 1107, 1518, 1641, 1658, 1719
TscAI CASTG 1 cut(s) 1227
TseFI GTSAC 2 cut(s) 11, 1927
Tsp45I GTSAC 2 cut(s) 11, 1927
TspDTI ATGAA 7 cut(s) 999, 1191, 1246, 1504, 1590, 1920, 1932
TspGWI ACGGA 4 cut(s) 222, 279, 293, 306
TspRI CASTG 1 cut(s) 1227
VpaK11BI GGWCC 1 cut(s) 134
VspI ATTAAT 1 cut(s) 1518
XapI RAATTY 2 cut(s) 39, 1057
XbaI TCTAGA 1 cut(s) 1067
XceI RCATGY 1 cut(s) 953
XcmI CCANNNNNNNNNTGG 1 cut(s) 292
XmaJI CCTAGG 1 cut(s) 803
XmiI GTMKAC 1 cut(s) 155
XspI CTAG 7 cut(s) 576, 804, 1068, 1235, 1239, 1395, 1812
ZraI GACGTC 1 cut(s) 222
Zsp2I ATGCAT 2 cut(s) 123, 1041
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.