Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0002653

Physical Location & Seq

Genomic Coordinates Forward (+)

37486924 .. 37491466

Gene Structure 4543 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00029030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1452 bp

ATGGGTTCTTTACAGTATGAAGTCACCAACCTACTGTTCGGAAAGATCAAGGCTTTGGAGCCTGAAAATGCCATCAAAATCATGGGCTATCTTCTCATACAAGATCTTGGCGAGAACGATTTGATGCGCCTGGCTTATGGCCCAGATACCCTCTTGCACTCTCTGATTCTCAGAGCCAAAATCCAGTTGGGACTTTCCTCCAACACTTCGTCTTCTTCTGCATCTTCCACCCCATCTTCTCCTTCCCCTCTAAACCCCATAGCCAGACCCACCAGCGCCAGCAACCCATTCTCACAGTCCTCCCCTAGAATCCCAAACGGTGCTTTTGACTTTCCCAAAAACCCATCTTCTCCTTCCTCCAATTCCTGGCCTCTTTCTGCCTTCCCCAACAACTCCATTAGCCCCAAGTCCAGTCCTCTGCTCTCTTACGACAATATCCGGGCCGGCGCCGGAGCCGGGTCGGTCCCACTTCCCTTGCATTCCAAACACTCCGGCAAGGACGGTGATGTTTGGTCCGGCACTGACCTCATTGACGAGCACCAACTCAACGACTACTTGTCTTTCCTCAATGAGACCTCCTCCTCTTCCAGGCCCGACGATTTCATTGATCCCCGGCTCGAATTGGGCCACGGGGTTCCCGACTGGGCTCACTCTCTCAACAATGGCGACGCCCATTTGCACAGGAGGAGCTATTCGGCCAGTGACGCCTGTTTCGGGACCGAAGACGCCGCCCTGGGTGGCGGCTTCAAGCCCTGCCTCTACTTTGCTAGAGGGTTTTGCAAGAATGGGAGCAATTGCAAGTTTGTGCATGGCGGTTTCGGCGAGTCGGTGGAAGCCGGTGCCGCTGCTGGTGGTGGCATTGTGGGCTCCCCGAGTAAGTTCGATGGCTTCGAGCAGCTACAGCATGAGGAGATGCTGAGGTTGAAGGCTGCTGCCCATCAACAGAGATTAGCTGCTGCTGCTTCTCAGTTTATGGCTGGGGGAGGGCCATCTTCTCCTTACAACAAGTATATGAATTTCCTCTTGCAACAGCAAAATGATCCCCAAAGAGCTGCGGCAATCATGATGGGGGAAGAATTTTACAAGTATGGGCGGTGCCGACCTGAAAGGAACGACCTTTTGGCAATGGCTTCTGTTGAAAAGGCCACCTCGGCTTCCAGGCAGATCTACTTGACATTCCCAGCTGAGAGCACCTTTAGAGATGAAGATGTTTCGGAATACTTCAGCAAGTATGGGCCAGTTCAAGATGTACGGATTCCATATCAGCAGAAAAGAATGTTTGGGTTTGTTACGTTTGTATACCCAGAAACTGTCAGGCTCATATTATCCAAAGGGAATCCACATTTTATATGCGAGTCGCGTGTTCTTGTCAAGCCCTATAAGGAGAAGGGAAAAGTCCTGGATAAGAGGCAACAACAGCATCAAGAGAGGGGGAATTTTCACCATGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 zf-CCCH

Protein Analysis

483

Amino Acids

52.9

Weight (kDa)

7.25

Isoelectric Point (pI)

46.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PABC_AtC3H46	PF23182	6 - 68	8.6e-28	AtC3H46 PABC domain
RRM_1	PF00076	400 - 443	1.1e-06	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002653)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51520 AT1G51520 AT1G51530 AT1G51530 AT3G21100 AT3G21100 AT3G21100 AT3G21100 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440
fragaria_vesca	FvH4_3g28410 FvH4_3g28410 FvH4_3g28410
malus_domestica	MD00G1177200.v1.1 MD03G1171700.v1.1 MD11G1189200.v1.1
prunus_persica	Prupe.4G255200_v2.0.a1
pyrus_communis	pycom03g12880 pycom11g16560
rosa_chinensis	RchiOBHm_Chr5g0053291
rosa_laevigata	RLG00000034771
rosa_multiflora	Rmu_sc0001966.1_g000018
rosa_roxburghii	Rroxscaffold_1G00029030
rosa_rugosa	Rorug05G0267800 Rorug05G0267900
rosa_samantha	Rh5AG340200 Rh5BG350900 Rh5CG377100 Rh5DG364800
rosa_wichuraiana	Rw5G032120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	446, 839, 1095
AccB7I	CCANNNNNTGG	1 cut(s)	366
AccI	GTMKAC	1 cut(s)	1299
AccII	CGCG	1 cut(s)	1360
AciI	CCGC	6 cut(s)	729, 741, 813, 843, 1055, 1093
AclWI	GGATC	2 cut(s)	602, 1034
AcoI	YGGCCR	1 cut(s)	696
AcsI	RAATTY	3 cut(s)	1015, 1076, 1435
AcuI	CTGAAG	1 cut(s)	1207
AcyI	GRCGYC	4 cut(s)	447, 669, 705, 726
AfaI	GTAC	1 cut(s)	1251
AfiI	CCNNNNNNNGG	4 cut(s)	366, 456, 588, 714
AgsI	TTSAA	4 cut(s)	748, 925, 1139, 1244
AhdI	GACNNNNNGTC	1 cut(s)	556
AjnI	CCWGG	6 cut(s)	129, 365, 587, 732, 1157, 1398
AjuI	GAANNNNNNNTTGG	4 cut(s)	20, 52, 1103, 1135
AluBI	AGCT	5 cut(s)	690, 898, 953, 1052, 1184
AluI	AGCT	5 cut(s)	690, 898, 953, 1052, 1184
Alw21I	GWGCWC	2 cut(s)	540, 1193
Alw26I	GTCTC	1 cut(s)	566
AlwI	GGATC	2 cut(s)	602, 1034
AlwNI	CAGNNNCTG	1 cut(s)	1310
Ama87I	CYCGRG	1 cut(s)	871
AoxI	GGCC	9 cut(s)	139, 368, 441, 590, 625, 696, 986, 1143, 1235
ApeKI	GCWGC	8 cut(s)	845, 895, 929, 932, 953, 956, 959, 1052
ApoI	RAATTY	3 cut(s)	1015, 1076, 1435
ArsI	GACNNNNNNTTYG	2 cut(s)	695, 727
AspLEI	GCGC	3 cut(s)	129, 278, 449
AspS9I	GGNCC	9 cut(s)	140, 441, 463, 513, 591, 625, 717, 986, 1235
AsuC2I	CCSGG	3 cut(s)	440, 457, 613
AsuHPI	GGTGA	3 cut(s)	16, 515, 1433
AvaI	CYCGRG	1 cut(s)	871
AvaII	GGWCC	3 cut(s)	463, 513, 717
BanI	GGYRCC	3 cut(s)	446, 839, 1095
BanII	GRGCYC	2 cut(s)	649, 869
BbsI	GAAGAC	2 cut(s)	204, 729
Bbv12I	GWGCWC	2 cut(s)	540, 1193
BbvCI	CCTCAGC	1 cut(s)	917
BbvI	GCAGC	8 cut(s)	832, 907, 916, 919, 940, 943, 946, 1039
BccI	CCATC	7 cut(s)	80, 241, 352, 878, 945, 997, 1060
BciT130I	CCWGG	6 cut(s)	131, 367, 589, 734, 1159, 1400
BcnI	CCSGG	3 cut(s)	440, 457, 613
BcoDI	GTCTC	1 cut(s)	566
BfaI	CTAG	2 cut(s)	306, 768
BfmI	CTRYAG	1 cut(s)	899
BfoI	RGCGCY	2 cut(s)	279, 450
BglI	GCCNNNNNGGC	1 cut(s)	1151
BglII	AGATCT	2 cut(s)	103, 1164
Bme1390I	CCNGG	9 cut(s)	131, 367, 440, 457, 589, 613, 734, 1159, 1400
Bme18I	GGWCC	3 cut(s)	463, 513, 717
BmeRI	GACNNNNNGTC	1 cut(s)	556
BmeT110I	CYCGRG	1 cut(s)	871
BmgT120I	GGNCC	9 cut(s)	140, 441, 463, 513, 591, 625, 717, 986, 1235
BmiI	GGNNCC	9 cut(s)	60, 448, 454, 465, 636, 718, 841, 868, 1097
BmrFI	CCNGG	9 cut(s)	131, 367, 440, 457, 589, 613, 734, 1159, 1400
BmrI	ACTGGG	1 cut(s)	652
BmsI	GCATC	4 cut(s)	114, 230, 903, 1429
BmuI	ACTGGG	1 cut(s)	652
BpiI	GAAGAC	2 cut(s)	204, 729
BplI	GAGNNNNNCTC	2 cut(s)	563, 595
Bpu10I	CCTNAGC	1 cut(s)	917
BpuMI	CCSGG	3 cut(s)	440, 457, 613
BsaHI	GRCGYC	4 cut(s)	447, 669, 705, 726
BsaI	GGTCTC	1 cut(s)	566
BsaJI	CCNNGG	5 cut(s)	611, 628, 732, 733, 1149
Bsc4I	CCNNNNNNNGG	4 cut(s)	366, 456, 588, 714
Bse118I	RCCGGY	2 cut(s)	443, 836
Bse1I	ACTGG	5 cut(s)	184, 411, 647, 699, 1238
Bse3DI	GCAATG	1 cut(s)	1131
BseBI	CCWGG	6 cut(s)	131, 367, 589, 734, 1159, 1400
BseDI	CCNNGG	5 cut(s)	611, 628, 732, 733, 1149
BseLI	CCNNNNNNNGG	4 cut(s)	366, 456, 588, 714
BseMI	GCAATG	1 cut(s)	1131
BseMII	CTCAG	4 cut(s)	184, 908, 980, 1176
BseNI	ACTGG	5 cut(s)	184, 411, 647, 699, 1238
BseRI	GAGGAG	4 cut(s)	568, 571, 700, 923
BseXI	GCAGC	8 cut(s)	832, 907, 916, 919, 940, 943, 946, 1039
BseYI	CCCAGC	2 cut(s)	977, 1180
Bsh1236I	CGCG	1 cut(s)	1360
BshFI	GGCC	9 cut(s)	141, 370, 443, 592, 627, 698, 988, 1145, 1237
BshNI	GGYRCC	3 cut(s)	446, 839, 1095
BsiHKAI	GWGCWC	2 cut(s)	540, 1193
BsiHKCI	CYCGRG	1 cut(s)	871
BsiSI	CCGG	8 cut(s)	439, 444, 450, 456, 492, 516, 613, 837
BslFI	GGGAC	3 cut(s)	204, 449, 730
BslI	CCNNNNNNNGG	4 cut(s)	366, 456, 588, 714
BsmAI	GTCTC	1 cut(s)	566
BsmFI	GGGAC	3 cut(s)	204, 449, 730
BsmI	GAATGC	1 cut(s)	478
BsnI	GGCC	9 cut(s)	141, 370, 443, 592, 627, 698, 988, 1145, 1237
Bso31I	GGTCTC	1 cut(s)	566
BsoBI	CYCGRG	1 cut(s)	871
Bsp1286I	GDGCHC	4 cut(s)	540, 649, 869, 1193
Bsp143I	GATC	5 cut(s)	45, 103, 607, 1039, 1164
BspACI	CCGC	6 cut(s)	729, 741, 813, 843, 1055, 1093
BspANI	GGCC	9 cut(s)	141, 370, 443, 592, 627, 698, 988, 1145, 1237
BspCNI	CTCAG	4 cut(s)	183, 909, 979, 1177
BspFNI	CGCG	1 cut(s)	1360
BspHI	TCATGA	1 cut(s)	1062
BspLI	GGNNCC	9 cut(s)	60, 448, 454, 465, 636, 718, 841, 868, 1097
BspPI	GGATC	2 cut(s)	602, 1034
BspT107I	GGYRCC	3 cut(s)	446, 839, 1095
BspTNI	GGTCTC	1 cut(s)	566
BsrDI	GCAATG	1 cut(s)	1131
BsrFI	RCCGGY	2 cut(s)	443, 836
BsrI	ACTGG	5 cut(s)	184, 411, 647, 699, 1238
BssAI	RCCGGY	2 cut(s)	443, 836
BssECI	CCNNGG	5 cut(s)	611, 628, 732, 733, 1149
BssMI	GATC	5 cut(s)	45, 103, 607, 1039, 1164
BssNAI	GTATAC	1 cut(s)	1300
BssNI	GRCGYC	4 cut(s)	447, 669, 705, 726
Bst1107I	GTATAC	1 cut(s)	1300
Bst2UI	CCWGG	6 cut(s)	131, 367, 589, 734, 1159, 1400
Bst4CI	ACNGT	6 cut(s)	15, 36, 297, 320, 503, 1312
Bst6I	CTCTTC	1 cut(s)	589
BstACI	GRCGYC	4 cut(s)	447, 669, 705, 726
BstC8I	GCNNGC	2 cut(s)	280, 445
BstDEI	CTNAG	4 cut(s)	170, 917, 966, 1185
BstDSI	CCRYGG	1 cut(s)	628
BstENI	CCTNNNNNAGG	1 cut(s)	586
BstFNI	CGCG	1 cut(s)	1360
BstH2I	RGCGCY	2 cut(s)	279, 450
BstHHI	GCGC	3 cut(s)	129, 278, 449
BstKTI	GATC	5 cut(s)	48, 106, 610, 1042, 1167
BstMAI	GTCTC	1 cut(s)	566
BstMBI	GATC	5 cut(s)	45, 103, 607, 1039, 1164
BstMWI	GCNNNNNNNGC	8 cut(s)	704, 819, 842, 864, 901, 959, 1151, 1417
BstNI	CCWGG	6 cut(s)	131, 367, 589, 734, 1159, 1400
BstSCI	CCNGG	9 cut(s)	129, 365, 438, 455, 587, 611, 732, 1157, 1398
BstSFI	CTRYAG	1 cut(s)	899
BstUI	CGCG	1 cut(s)	1360
BstV1I	GCAGC	8 cut(s)	832, 907, 916, 919, 940, 943, 946, 1039
BstV2I	GAAGAC	2 cut(s)	204, 729
BstX2I	RGATCY	2 cut(s)	103, 1164
BstYI	RGATCY	2 cut(s)	103, 1164
BstZ17I	GTATAC	1 cut(s)	1300
BsuRI	GGCC	9 cut(s)	141, 370, 443, 592, 627, 698, 988, 1145, 1237
BtgI	CCRYGG	1 cut(s)	628
BtsIMutI	CAGTG	2 cut(s)	519, 706
Cac8I	GCNNGC	2 cut(s)	280, 445
CaiI	CAGNNNCTG	1 cut(s)	1310
CciI	TCATGA	1 cut(s)	1062
CfoI	GCGC	3 cut(s)	129, 278, 449
Cfr10I	RCCGGY	2 cut(s)	443, 836
Cfr13I	GGNCC	9 cut(s)	140, 441, 463, 513, 591, 625, 717, 986, 1235
CseI	GACGC	3 cut(s)	677, 713, 734
Csp6I	GTAC	1 cut(s)	1250
CspCI	CAANNNNNGTGG	2 cut(s)	456, 491
CviAII	CATG	5 cut(s)	82, 809, 905, 1063, 1445
CviQI	GTAC	1 cut(s)	1250
DdeI	CTNAG	4 cut(s)	170, 917, 966, 1185
DinI	GGCGCC	1 cut(s)	448
DpnI	GATC	5 cut(s)	47, 105, 609, 1041, 1166
DpnII	GATC	5 cut(s)	45, 103, 607, 1039, 1164
DriI	GACNNNNNGTC	1 cut(s)	556
EaeI	YGGCCR	1 cut(s)	696
Eam1104I	CTCTTC	1 cut(s)	589
Eam1105I	GACNNNNNGTC	1 cut(s)	556
EarI	CTCTTC	1 cut(s)	589
Eco24I	GRGCYC	2 cut(s)	649, 869
Eco31I	GGTCTC	1 cut(s)	566
Eco47I	GGWCC	3 cut(s)	463, 513, 717
Eco57I	CTGAAG	1 cut(s)	1207
Eco88I	CYCGRG	1 cut(s)	871
EcoNI	CCTNNNNNAGG	1 cut(s)	586
EcoRII	CCWGG	6 cut(s)	129, 365, 587, 732, 1157, 1398
EcoT38I	GRGCYC	2 cut(s)	649, 869
EgeI	GGCGCC	1 cut(s)	448
EheI	GGCGCC	1 cut(s)	448
FaeI	CATG	5 cut(s)	85, 812, 908, 1066, 1448
FaqI	GGGAC	3 cut(s)	204, 449, 730
FatI	CATG	5 cut(s)	81, 808, 904, 1062, 1444
FblI	GTMKAC	1 cut(s)	1299
FriOI	GRGCYC	2 cut(s)	649, 869
FspBI	CTAG	2 cut(s)	306, 768
GlaI	GCGC	3 cut(s)	128, 277, 448
GsaI	CCCAGC	2 cut(s)	981, 1184
HaeII	RGCGCY	2 cut(s)	279, 450
HaeIII	GGCC	9 cut(s)	141, 370, 443, 592, 627, 698, 988, 1145, 1237
HapII	CCGG	8 cut(s)	439, 444, 450, 456, 492, 516, 613, 837
HgaI	GACGC	3 cut(s)	677, 713, 734
HhaI	GCGC	3 cut(s)	129, 278, 449
Hin1I	GRCGYC	4 cut(s)	447, 669, 705, 726
Hin1II	CATG	5 cut(s)	85, 812, 908, 1066, 1448
Hin6I	GCGC	3 cut(s)	127, 276, 447
HinP1I	GCGC	3 cut(s)	127, 276, 447
HinfI	GANTC	6 cut(s)	166, 309, 824, 1255, 1336, 1355
HpaII	CCGG	8 cut(s)	439, 444, 450, 456, 492, 516, 613, 837
HphI	GGTGA	3 cut(s)	16, 515, 1433
Hpy166II	GTNNAC	1 cut(s)	1300
Hpy188I	TCNGA	4 cut(s)	41, 165, 173, 1216
Hpy188III	TCNNGA	5 cut(s)	638, 715, 1063, 1244, 1424
Hpy8I	GTNNAC	1 cut(s)	1300
Hpy99I	CGWCG	2 cut(s)	599, 671
HpyAV	CCTTC	5 cut(s)	252, 363, 391, 919, 1381
HpyCH4III	ACNGT	6 cut(s)	15, 36, 297, 320, 503, 1312
HpyCH4IV	ACGT	1 cut(s)	1292
HpyCH4V	TGCA	8 cut(s)	157, 221, 478, 679, 780, 798, 808, 1027
HpyF10VI	GCNNNNNNNGC	8 cut(s)	704, 819, 842, 864, 901, 959, 1151, 1417
HpyF3I	CTNAG	4 cut(s)	170, 917, 966, 1185
HpySE526I	ACGT	1 cut(s)	1292
Hsp92I	GRCGYC	4 cut(s)	447, 669, 705, 726
Hsp92II	CATG	5 cut(s)	85, 812, 908, 1066, 1448
HspAI	GCGC	3 cut(s)	127, 276, 447
KasI	GGCGCC	1 cut(s)	446
KroI	GCCGGC	1 cut(s)	443
KroNI	GCCGGC	1 cut(s)	445
Kzo9I	GATC	5 cut(s)	45, 103, 607, 1039, 1164
LmnI	GCTCC	5 cut(s)	58, 452, 687, 789, 872
Lsp1109I	GCAGC	8 cut(s)	832, 907, 916, 919, 940, 943, 946, 1039
LweI	GCATC	4 cut(s)	114, 230, 903, 1429
MaeI	CTAG	2 cut(s)	306, 768
MaeII	ACGT	1 cut(s)	1292
MaeIII	GTNAC	3 cut(s)	22, 701, 1288
MalI	GATC	5 cut(s)	47, 105, 609, 1041, 1166
MboI	GATC	5 cut(s)	45, 103, 607, 1039, 1164
MfeI	CAATTG	1 cut(s)	793
MflI	RGATCY	2 cut(s)	103, 1164
MhlI	GDGCHC	4 cut(s)	540, 649, 869, 1193
MluCI	AATT	6 cut(s)	361, 620, 793, 1015, 1076, 1435
Mly113I	GGCGCC	1 cut(s)	447
MlyI	GAGTC	2 cut(s)	833, 1364
MmeI	TCCRAC	1 cut(s)	225
MroNI	GCCGGC	1 cut(s)	443
MspA1I	CMGCKG	2 cut(s)	845, 1184
MspI	CCGG	8 cut(s)	439, 444, 450, 456, 492, 516, 613, 837
MspR9I	CCNGG	9 cut(s)	131, 367, 440, 457, 589, 613, 734, 1159, 1400
MunI	CAATTG	1 cut(s)	793
Mva1269I	GAATGC	1 cut(s)	478
MvaI	CCWGG	6 cut(s)	131, 367, 589, 734, 1159, 1400
MvnI	CGCG	1 cut(s)	1360
MwoI	GCNNNNNNNGC	8 cut(s)	704, 819, 842, 864, 901, 959, 1151, 1417
NaeI	GCCGGC	1 cut(s)	445
NarI	GGCGCC	1 cut(s)	447
NciI	CCSGG	3 cut(s)	440, 457, 613
NdeII	GATC	5 cut(s)	45, 103, 607, 1039, 1164
NgoMIV	GCCGGC	1 cut(s)	443
NlaIII	CATG	5 cut(s)	85, 812, 908, 1066, 1448
NlaIV	GGNNCC	9 cut(s)	60, 448, 454, 465, 636, 718, 841, 868, 1097
NmeAIII	GCCGAG	1 cut(s)	1130
NmuCI	GTSAC	2 cut(s)	22, 701
PagI	TCATGA	1 cut(s)	1062
PasI	CCCWGGG	1 cut(s)	733
PcsI	WCGNNNNNNNCGW	2 cut(s)	636, 888
PctI	GAATGC	1 cut(s)	478
PdiI	GCCGGC	1 cut(s)	445
PfeI	GAWTC	4 cut(s)	166, 309, 1255, 1336
PflMI	CCANNNNNTGG	1 cut(s)	366
PfoI	TCCNGGA	1 cut(s)	1398
PleI	GAGTC	2 cut(s)	832, 1363
PluTI	GGCGCC	1 cut(s)	450
PpsI	GAGTC	2 cut(s)	832, 1363
Psp6I	CCWGG	6 cut(s)	129, 365, 587, 732, 1157, 1398
PspFI	CCCAGC	2 cut(s)	977, 1180
PspGI	CCWGG	6 cut(s)	129, 365, 587, 732, 1157, 1398
PspN4I	GGNNCC	9 cut(s)	60, 448, 454, 465, 636, 718, 841, 868, 1097
PspPI	GGNCC	9 cut(s)	140, 441, 463, 513, 591, 625, 717, 986, 1235
PstNI	CAGNNNCTG	1 cut(s)	1310
PsuI	RGATCY	2 cut(s)	103, 1164
PvuII	CAGCTG	1 cut(s)	1184
RsaI	GTAC	1 cut(s)	1251
RsaNI	GTAC	1 cut(s)	1250
Sau3AI	GATC	5 cut(s)	45, 103, 607, 1039, 1164
Sau96I	GGNCC	9 cut(s)	140, 441, 463, 513, 591, 625, 717, 986, 1235
SchI	GAGTC	2 cut(s)	833, 1364
ScrFI	CCNGG	9 cut(s)	131, 367, 440, 457, 589, 613, 734, 1159, 1400
SduI	GDGCHC	4 cut(s)	540, 649, 869, 1193
SfaNI	GCATC	4 cut(s)	114, 230, 903, 1429
SfcI	CTRYAG	1 cut(s)	899
SfoI	GGCGCC	1 cut(s)	448
SinI	GGWCC	3 cut(s)	463, 513, 717
Sse9I	AATT	6 cut(s)	361, 620, 793, 1015, 1076, 1435
SsiI	CCGC	6 cut(s)	729, 741, 813, 843, 1055, 1093
SspDI	GGCGCC	1 cut(s)	446
SspMI	CTAG	2 cut(s)	306, 768
StyD4I	CCNGG	9 cut(s)	129, 365, 438, 455, 587, 611, 732, 1157, 1398
TaaI	ACNGT	6 cut(s)	15, 36, 297, 320, 503, 1312
TaiI	ACGT	1 cut(s)	1295
TaqI	TCGA	3 cut(s)	618, 882, 891
TaqII	GACCGA	2 cut(s)	451, 734
TasI	AATT	6 cut(s)	361, 620, 793, 1015, 1076, 1435
TauI	GCSGC	4 cut(s)	731, 744, 845, 1058
TfiI	GAWTC	4 cut(s)	166, 309, 1255, 1336
TscAI	CASTG	2 cut(s)	526, 706
TseFI	GTSAC	2 cut(s)	22, 701
TseI	GCWGC	8 cut(s)	845, 895, 929, 932, 953, 956, 959, 1052
Tsp45I	GTSAC	2 cut(s)	22, 701
TspDTI	ATGAA	4 cut(s)	33, 592, 1028, 1218
TspGWI	ACGGA	1 cut(s)	1267
TspRI	CASTG	2 cut(s)	526, 706
Van91I	CCANNNNNTGG	1 cut(s)	366
VpaK11BI	GGWCC	3 cut(s)	463, 513, 717
XagI	CCTNNNNNAGG	1 cut(s)	586
XapI	RAATTY	3 cut(s)	1015, 1076, 1435
XcmI	CCANNNNNNNNNTGG	2 cut(s)	79, 184
XmiI	GTMKAC	1 cut(s)	1299
XspI	CTAG	2 cut(s)	306, 768

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.