zinc finger CCCH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G51520 AT1G51520 AT1G51530 AT1G51530 AT3G21100 AT3G21100 AT3G21100 AT3G21100 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 |
| fragaria_vesca | FvH4_3g28410 FvH4_3g28410 FvH4_3g28410 |
| malus_domestica | MD00G1177200.v1.1 MD03G1171700.v1.1 MD11G1189200.v1.1 |
| prunus_persica | Prupe.4G255200_v2.0.a1 |
| pyrus_communis | pycom03g12880 pycom11g16560 |
| rosa_chinensis | RchiOBHm_Chr5g0053291 |
| rosa_laevigata | RLG00000034771 |
| rosa_multiflora | Rmu_sc0001966.1_g000018 |
| rosa_roxburghii | Rroxscaffold_1G00029030 |
| rosa_rugosa | Rorug05G0267800 Rorug05G0267900 |
| rosa_samantha | Rh5AG340200 Rh5BG350900 Rh5CG377100 Rh5DG364800 |
| rosa_wichuraiana | Rw5G032120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1798 |
| Acc36I | ACCTGC | 2 cut(s) | 1798, 1909 |
| AccB1I | GGYRCC | 3 cut(s) | 446, 839, 1095 |
| AccI | GTMKAC | 1 cut(s) | 1299 |
| AccII | CGCG | 2 cut(s) | 1360, 1814 |
| AclWI | GGATC | 3 cut(s) | 602, 1034, 1472 |
| AcoI | YGGCCR | 1 cut(s) | 696 |
| AcsI | RAATTY | 4 cut(s) | 361, 1015, 1076, 1436 |
| AcuI | CTGAAG | 2 cut(s) | 1207, 1817 |
| AcyI | GRCGYC | 4 cut(s) | 447, 669, 705, 726 |
| AfaI | GTAC | 1 cut(s) | 1251 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 456, 588, 714 |
| AflIII | ACRYGT | 1 cut(s) | 1909 |
| AgsI | TTSAA | 8 cut(s) | 748, 925, 1139, 1244, 1580, 1624, 1739, 1889 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 556 |
| AjnI | CCWGG | 6 cut(s) | 129, 365, 587, 732, 1157, 1398 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1103, 1135 |
| AleI | CACNNNNGTG | 1 cut(s) | 1908 |
| AluBI | AGCT | 8 cut(s) | 690, 898, 953, 1052, 1184, 1489, 1612, 1892 |
| AluI | AGCT | 8 cut(s) | 690, 898, 953, 1052, 1184, 1489, 1612, 1892 |
| Alw21I | GWGCWC | 4 cut(s) | 540, 1193, 1491, 1687 |
| Alw26I | GTCTC | 3 cut(s) | 566, 1950, 1988 |
| AlwI | GGATC | 3 cut(s) | 602, 1034, 1472 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1310 |
| Ama87I | CYCGRG | 1 cut(s) | 871 |
| ApoI | RAATTY | 4 cut(s) | 361, 1015, 1076, 1436 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 695, 727 |
| AspLEI | GCGC | 3 cut(s) | 129, 278, 449 |
| AsuC2I | CCSGG | 3 cut(s) | 440, 457, 613 |
| AsuHPI | GGTGA | 3 cut(s) | 515, 1434, 1790 |
| AvaI | CYCGRG | 1 cut(s) | 871 |
| AvaII | GGWCC | 4 cut(s) | 463, 513, 717, 1921 |
| BanI | GGYRCC | 3 cut(s) | 446, 839, 1095 |
| BanII | GRGCYC | 5 cut(s) | 649, 869, 1457, 1491, 1703 |
| BbsI | GAAGAC | 3 cut(s) | 204, 729, 1600 |
| Bbv12I | GWGCWC | 4 cut(s) | 540, 1193, 1491, 1687 |
| BbvCI | CCTCAGC | 1 cut(s) | 917 |
| BccI | CCATC | 8 cut(s) | 80, 241, 352, 878, 945, 997, 1060, 1665 |
| BciT130I | CCWGG | 6 cut(s) | 131, 367, 589, 734, 1159, 1400 |
| BcnI | CCSGG | 3 cut(s) | 440, 457, 613 |
| BcoDI | GTCTC | 3 cut(s) | 566, 1950, 1988 |
| BfaI | CTAG | 2 cut(s) | 768, 1854 |
| BfmI | CTRYAG | 3 cut(s) | 899, 1607, 1974 |
| BfoI | RGCGCY | 2 cut(s) | 279, 450 |
| BfuAI | ACCTGC | 2 cut(s) | 1798, 1909 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1151 |
| BglII | AGATCT | 3 cut(s) | 103, 1164, 1984 |
| Bme1390I | CCNGG | 9 cut(s) | 131, 367, 440, 457, 589, 613, 734, 1159, 1400 |
| Bme18I | GGWCC | 4 cut(s) | 463, 513, 717, 1921 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 556 |
| BmeT110I | CYCGRG | 1 cut(s) | 871 |
| BmiI | GGNNCC | 9 cut(s) | 60, 448, 454, 465, 636, 718, 841, 868, 1097 |
| BmrFI | CCNGG | 9 cut(s) | 131, 367, 440, 457, 589, 613, 734, 1159, 1400 |
| BmrI | ACTGGG | 1 cut(s) | 652 |
| BmsI | GCATC | 7 cut(s) | 114, 230, 823, 903, 1429, 1518, 1758 |
| BmuI | ACTGGG | 1 cut(s) | 652 |
| BpiI | GAAGAC | 3 cut(s) | 204, 729, 1600 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 563, 595 |
| BpmI | CTGGAG | 1 cut(s) | 999 |
| Bpu10I | CCTNAGC | 2 cut(s) | 917, 1950 |
| BpuEI | CTTGAG | 1 cut(s) | 1717 |
| BpuMI | CCSGG | 3 cut(s) | 440, 457, 613 |
| BsaHI | GRCGYC | 4 cut(s) | 447, 669, 705, 726 |
| BsaI | GGTCTC | 1 cut(s) | 566 |
| BsaJI | CCNNGG | 8 cut(s) | 611, 628, 732, 733, 1149, 1585, 1774, 1812 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 456, 588, 714 |
| Bse118I | RCCGGY | 2 cut(s) | 443, 836 |
| Bse1I | ACTGG | 5 cut(s) | 184, 411, 647, 699, 1238 |
| Bse3DI | GCAATG | 1 cut(s) | 1131 |
| BseBI | CCWGG | 6 cut(s) | 131, 367, 589, 734, 1159, 1400 |
| BseDI | CCNNGG | 8 cut(s) | 611, 628, 732, 733, 1149, 1585, 1774, 1812 |
| BseGI | GGATG | 1 cut(s) | 838 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 456, 588, 714 |
| BseMI | GCAATG | 1 cut(s) | 1131 |
| BseMII | CTCAG | 5 cut(s) | 184, 908, 980, 1176, 1812 |
| BseNI | ACTGG | 5 cut(s) | 184, 411, 647, 699, 1238 |
| BseRI | GAGGAG | 6 cut(s) | 568, 571, 700, 923, 996, 1565 |
| BseYI | CCCAGC | 2 cut(s) | 1180, 1641 |
| Bsh1236I | CGCG | 2 cut(s) | 1360, 1814 |
| BshNI | GGYRCC | 3 cut(s) | 446, 839, 1095 |
| BsiHKAI | GWGCWC | 4 cut(s) | 540, 1193, 1491, 1687 |
| BsiHKCI | CYCGRG | 1 cut(s) | 871 |
| BsiSI | CCGG | 8 cut(s) | 439, 444, 450, 456, 492, 516, 613, 837 |
| BslFI | GGGAC | 3 cut(s) | 204, 449, 730 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 456, 588, 714 |
| BsmAI | GTCTC | 3 cut(s) | 566, 1950, 1988 |
| BsmBI | CGTCTC | 1 cut(s) | 1950 |
| BsmFI | GGGAC | 3 cut(s) | 204, 449, 730 |
| BsmI | GAATGC | 3 cut(s) | 478, 1512, 1954 |
| Bso31I | GGTCTC | 1 cut(s) | 566 |
| BsoBI | CYCGRG | 1 cut(s) | 871 |
| Bsp1286I | GDGCHC | 8 cut(s) | 540, 649, 869, 1193, 1457, 1491, 1687, 1703 |
| BspCNI | CTCAG | 5 cut(s) | 183, 909, 979, 1177, 1813 |
| BspFNI | CGCG | 2 cut(s) | 1360, 1814 |
| BspHI | TCATGA | 2 cut(s) | 1062, 1894 |
| BspLI | GGNNCC | 9 cut(s) | 60, 448, 454, 465, 636, 718, 841, 868, 1097 |
| BspMAI | CTGCAG | 2 cut(s) | 1611, 1978 |
| BspMI | ACCTGC | 2 cut(s) | 1798, 1909 |
| BspPI | GGATC | 3 cut(s) | 602, 1034, 1472 |
| BspT107I | GGYRCC | 3 cut(s) | 446, 839, 1095 |
| BspTNI | GGTCTC | 1 cut(s) | 566 |
| BsrDI | GCAATG | 1 cut(s) | 1131 |
| BsrFI | RCCGGY | 2 cut(s) | 443, 836 |
| BsrI | ACTGG | 5 cut(s) | 184, 411, 647, 699, 1238 |
| BssAI | RCCGGY | 2 cut(s) | 443, 836 |
| BssECI | CCNNGG | 8 cut(s) | 611, 628, 732, 733, 1149, 1585, 1774, 1812 |
| BssNI | GRCGYC | 4 cut(s) | 447, 669, 705, 726 |
| BssT1I | CCWWGG | 2 cut(s) | 1585, 1774 |
| Bst2UI | CCWGG | 6 cut(s) | 131, 367, 589, 734, 1159, 1400 |
| Bst4CI | ACNGT | 7 cut(s) | 15, 36, 297, 320, 503, 1312, 1999 |
| Bst6I | CTCTTC | 1 cut(s) | 589 |
| BstACI | GRCGYC | 4 cut(s) | 447, 669, 705, 726 |
| BstC8I | GCNNGC | 4 cut(s) | 280, 445, 1557, 1572 |
| BstDEI | CTNAG | 7 cut(s) | 170, 917, 966, 1185, 1821, 1950, 2058 |
| BstDSI | CCRYGG | 2 cut(s) | 628, 1812 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 586 |
| BstF5I | GGATG | 1 cut(s) | 838 |
| BstFNI | CGCG | 2 cut(s) | 1360, 1814 |
| BstH2I | RGCGCY | 2 cut(s) | 279, 450 |
| BstHHI | GCGC | 3 cut(s) | 129, 278, 449 |
| BstMAI | GTCTC | 3 cut(s) | 566, 1950, 1988 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 704, 819, 842, 864, 901, 959, 1151, 1417 |
| BstNI | CCWGG | 6 cut(s) | 131, 367, 589, 734, 1159, 1400 |
| BstSCI | CCNGG | 9 cut(s) | 129, 365, 438, 455, 587, 611, 732, 1157, 1398 |
| BstSFI | CTRYAG | 3 cut(s) | 899, 1607, 1974 |
| BstUI | CGCG | 2 cut(s) | 1360, 1814 |
| BstV2I | GAAGAC | 3 cut(s) | 204, 729, 1600 |
| BstX2I | RGATCY | 4 cut(s) | 103, 1164, 1477, 1984 |
| BstYI | RGATCY | 4 cut(s) | 103, 1164, 1477, 1984 |
| BtgI | CCRYGG | 2 cut(s) | 628, 1812 |
| BtsCI | GGATG | 1 cut(s) | 838 |
| BtsIMutI | CAGTG | 2 cut(s) | 519, 706 |
| BveI | ACCTGC | 2 cut(s) | 1798, 1909 |
| Cac8I | GCNNGC | 4 cut(s) | 280, 445, 1557, 1572 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1310 |
| CciI | TCATGA | 2 cut(s) | 1062, 1894 |
| CfoI | GCGC | 3 cut(s) | 129, 278, 449 |
| Cfr10I | RCCGGY | 2 cut(s) | 443, 836 |
| Cfr42I | CCGCGG | 1 cut(s) | 1815 |
| CseI | GACGC | 4 cut(s) | 677, 713, 734, 1932 |
| Csp6I | GTAC | 1 cut(s) | 1250 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 456, 491 |
| CviAII | CATG | 7 cut(s) | 82, 809, 905, 1063, 1446, 1712, 1895 |
| CviQI | GTAC | 1 cut(s) | 1250 |
| DdeI | CTNAG | 7 cut(s) | 170, 917, 966, 1185, 1821, 1950, 2058 |
| DinI | GGCGCC | 1 cut(s) | 448 |
| DriI | GACNNNNNGTC | 1 cut(s) | 556 |
| EaeI | YGGCCR | 1 cut(s) | 696 |
| Eam1104I | CTCTTC | 1 cut(s) | 589 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 556 |
| EarI | CTCTTC | 1 cut(s) | 589 |
| Ecl136II | GAGCTC | 1 cut(s) | 1489 |
| Eco130I | CCWWGG | 2 cut(s) | 1585, 1774 |
| Eco147I | AGGCCT | 1 cut(s) | 1773 |
| Eco24I | GRGCYC | 5 cut(s) | 649, 869, 1457, 1491, 1703 |
| Eco31I | GGTCTC | 1 cut(s) | 566 |
| Eco47I | GGWCC | 4 cut(s) | 463, 513, 717, 1921 |
| Eco53kI | GAGCTC | 1 cut(s) | 1489 |
| Eco57I | CTGAAG | 2 cut(s) | 1207, 1817 |
| Eco88I | CYCGRG | 1 cut(s) | 871 |
| EcoICRI | GAGCTC | 1 cut(s) | 1489 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 586 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1921 |
| EcoRII | CCWGG | 6 cut(s) | 129, 365, 587, 732, 1157, 1398 |
| EcoT14I | CCWWGG | 2 cut(s) | 1585, 1774 |
| EcoT38I | GRGCYC | 5 cut(s) | 649, 869, 1457, 1491, 1703 |
| EgeI | GGCGCC | 1 cut(s) | 448 |
| EheI | GGCGCC | 1 cut(s) | 448 |
| ErhI | CCWWGG | 2 cut(s) | 1585, 1774 |
| Esp3I | CGTCTC | 1 cut(s) | 1950 |
| FaeI | CATG | 7 cut(s) | 85, 812, 908, 1066, 1449, 1715, 1898 |
| FaqI | GGGAC | 3 cut(s) | 204, 449, 730 |
| FatI | CATG | 7 cut(s) | 81, 808, 904, 1062, 1445, 1711, 1894 |
| FauI | CCCGC | 1 cut(s) | 734 |
| FauNDI | CATATG | 1 cut(s) | 1483 |
| FblI | GTMKAC | 1 cut(s) | 1299 |
| FokI | GGATG | 1 cut(s) | 845 |
| FriOI | GRGCYC | 5 cut(s) | 649, 869, 1457, 1491, 1703 |
| FspBI | CTAG | 2 cut(s) | 768, 1854 |
| GlaI | GCGC | 3 cut(s) | 128, 277, 448 |
| GsaI | CCCAGC | 2 cut(s) | 1184, 1645 |
| GsuI | CTGGAG | 1 cut(s) | 999 |
| HaeII | RGCGCY | 2 cut(s) | 279, 450 |
| HapII | CCGG | 8 cut(s) | 439, 444, 450, 456, 492, 516, 613, 837 |
| HgaI | GACGC | 4 cut(s) | 677, 713, 734, 1932 |
| HhaI | GCGC | 3 cut(s) | 129, 278, 449 |
| Hin1I | GRCGYC | 4 cut(s) | 447, 669, 705, 726 |
| Hin1II | CATG | 7 cut(s) | 85, 812, 908, 1066, 1449, 1715, 1898 |
| Hin6I | GCGC | 3 cut(s) | 127, 276, 447 |
| HinP1I | GCGC | 3 cut(s) | 127, 276, 447 |
| HincII | GTYRAC | 1 cut(s) | 1846 |
| HindII | GTYRAC | 1 cut(s) | 1846 |
| HinfI | GANTC | 8 cut(s) | 166, 309, 824, 1255, 1336, 1355, 1469, 1603 |
| HpaII | CCGG | 8 cut(s) | 439, 444, 450, 456, 492, 516, 613, 837 |
| HphI | GGTGA | 3 cut(s) | 515, 1434, 1790 |
| Hpy166II | GTNNAC | 2 cut(s) | 1300, 1846 |
| Hpy188I | TCNGA | 8 cut(s) | 41, 165, 173, 1216, 1822, 1836, 1882, 2011 |
| Hpy8I | GTNNAC | 2 cut(s) | 1300, 1846 |
| Hpy99I | CGWCG | 2 cut(s) | 599, 671 |
| HpyAV | CCTTC | 9 cut(s) | 252, 363, 391, 919, 1381, 1763, 1831, 1856, 1934 |
| HpyCH4III | ACNGT | 7 cut(s) | 15, 36, 297, 320, 503, 1312, 1999 |
| HpyCH4IV | ACGT | 3 cut(s) | 1292, 1731, 1909 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 704, 819, 842, 864, 901, 959, 1151, 1417 |
| HpyF3I | CTNAG | 7 cut(s) | 170, 917, 966, 1185, 1821, 1950, 2058 |
| HpySE526I | ACGT | 3 cut(s) | 1292, 1731, 1909 |
| Hsp92I | GRCGYC | 4 cut(s) | 447, 669, 705, 726 |
| Hsp92II | CATG | 7 cut(s) | 85, 812, 908, 1066, 1449, 1715, 1898 |
| HspAI | GCGC | 3 cut(s) | 127, 276, 447 |
| KasI | GGCGCC | 1 cut(s) | 446 |
| KroI | GCCGGC | 1 cut(s) | 443 |
| KroNI | GCCGGC | 1 cut(s) | 445 |
| KspI | CCGCGG | 1 cut(s) | 1815 |
| LweI | GCATC | 7 cut(s) | 114, 230, 823, 903, 1429, 1518, 1758 |
| MaeI | CTAG | 2 cut(s) | 768, 1854 |
| MaeII | ACGT | 3 cut(s) | 1292, 1731, 1909 |
| MaeIII | GTNAC | 3 cut(s) | 22, 701, 1288 |
| MfeI | CAATTG | 1 cut(s) | 793 |
| MflI | RGATCY | 4 cut(s) | 103, 1164, 1477, 1984 |
| MhlI | GDGCHC | 8 cut(s) | 540, 649, 869, 1193, 1457, 1491, 1687, 1703 |
| MluCI | AATT | 9 cut(s) | 361, 620, 793, 1015, 1076, 1436, 1544, 1562, 1739 |
| Mly113I | GGCGCC | 1 cut(s) | 447 |
| MlyI | GAGTC | 2 cut(s) | 833, 1364 |
| MmeI | TCCRAC | 2 cut(s) | 225, 1516 |
| MroNI | GCCGGC | 1 cut(s) | 443 |
| MseI | TTAA | 1 cut(s) | 1989 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1908, 1959 |
| MspA1I | CMGCKG | 4 cut(s) | 845, 1184, 1612, 1814 |
| MspI | CCGG | 8 cut(s) | 439, 444, 450, 456, 492, 516, 613, 837 |
| MspR9I | CCNGG | 9 cut(s) | 131, 367, 440, 457, 589, 613, 734, 1159, 1400 |
| MunI | CAATTG | 1 cut(s) | 793 |
| Mva1269I | GAATGC | 3 cut(s) | 478, 1512, 1954 |
| MvaI | CCWGG | 6 cut(s) | 131, 367, 589, 734, 1159, 1400 |
| MvnI | CGCG | 2 cut(s) | 1360, 1814 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 704, 819, 842, 864, 901, 959, 1151, 1417 |
| NaeI | GCCGGC | 1 cut(s) | 445 |
| NarI | GGCGCC | 1 cut(s) | 447 |
| NciI | CCSGG | 3 cut(s) | 440, 457, 613 |
| NdeI | CATATG | 1 cut(s) | 1483 |
| NgoMIV | GCCGGC | 1 cut(s) | 443 |
| NlaIII | CATG | 7 cut(s) | 85, 812, 908, 1066, 1449, 1715, 1898 |
| NlaIV | GGNNCC | 9 cut(s) | 60, 448, 454, 465, 636, 718, 841, 868, 1097 |
| NmeAIII | GCCGAG | 1 cut(s) | 1130 |
| NmuCI | GTSAC | 2 cut(s) | 22, 701 |
| OliI | CACNNNNGTG | 1 cut(s) | 1908 |
| PagI | TCATGA | 2 cut(s) | 1062, 1894 |
| PaqCI | CACCTGC | 1 cut(s) | 1798 |
| PasI | CCCWGGG | 1 cut(s) | 733 |
| PceI | AGGCCT | 1 cut(s) | 1773 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 636, 888 |
| PctI | GAATGC | 3 cut(s) | 478, 1512, 1954 |
| PdiI | GCCGGC | 1 cut(s) | 445 |
| PfeI | GAWTC | 6 cut(s) | 166, 309, 1255, 1336, 1469, 1603 |
| PfoI | TCCNGGA | 1 cut(s) | 1398 |
| PleI | GAGTC | 2 cut(s) | 832, 1363 |
| PluTI | GGCGCC | 1 cut(s) | 450 |
| PpsI | GAGTC | 2 cut(s) | 832, 1363 |
| PpuMI | RGGWCCY | 1 cut(s) | 1921 |
| Psp124BI | GAGCTC | 1 cut(s) | 1491 |
| Psp5II | RGGWCCY | 1 cut(s) | 1921 |
| Psp6I | CCWGG | 6 cut(s) | 129, 365, 587, 732, 1157, 1398 |
| PspFI | CCCAGC | 2 cut(s) | 1180, 1641 |
| PspGI | CCWGG | 6 cut(s) | 129, 365, 587, 732, 1157, 1398 |
| PspN4I | GGNNCC | 9 cut(s) | 60, 448, 454, 465, 636, 718, 841, 868, 1097 |
| PspPPI | RGGWCCY | 1 cut(s) | 1921 |
| PstI | CTGCAG | 2 cut(s) | 1611, 1978 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1310 |
| PsuI | RGATCY | 4 cut(s) | 103, 1164, 1477, 1984 |
| PvuII | CAGCTG | 2 cut(s) | 1184, 1612 |
| RsaI | GTAC | 1 cut(s) | 1251 |
| RsaNI | GTAC | 1 cut(s) | 1250 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1908, 1959 |
| SacI | GAGCTC | 1 cut(s) | 1491 |
| SacII | CCGCGG | 1 cut(s) | 1815 |
| SaqAI | TTAA | 1 cut(s) | 1989 |
| SchI | GAGTC | 2 cut(s) | 833, 1364 |
| ScrFI | CCNGG | 9 cut(s) | 131, 367, 440, 457, 589, 613, 734, 1159, 1400 |
| SduI | GDGCHC | 8 cut(s) | 540, 649, 869, 1193, 1457, 1491, 1687, 1703 |
| SfaNI | GCATC | 7 cut(s) | 114, 230, 823, 903, 1429, 1518, 1758 |
| SfcI | CTRYAG | 3 cut(s) | 899, 1607, 1974 |
| SfoI | GGCGCC | 1 cut(s) | 448 |
| Sfr303I | CCGCGG | 1 cut(s) | 1815 |
| SgrBI | CCGCGG | 1 cut(s) | 1815 |
| SinI | GGWCC | 4 cut(s) | 463, 513, 717, 1921 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1908, 1959 |
| SmlI | CTYRAG | 1 cut(s) | 1696 |
| SmoI | CTYRAG | 1 cut(s) | 1696 |
| Sse9I | AATT | 9 cut(s) | 361, 620, 793, 1015, 1076, 1436, 1544, 1562, 1739 |
| SseBI | AGGCCT | 1 cut(s) | 1773 |
| SspDI | GGCGCC | 1 cut(s) | 446 |
| SspMI | CTAG | 2 cut(s) | 768, 1854 |
| SstI | GAGCTC | 1 cut(s) | 1491 |
| StuI | AGGCCT | 1 cut(s) | 1773 |
| StyD4I | CCNGG | 9 cut(s) | 129, 365, 438, 455, 587, 611, 732, 1157, 1398 |
| StyI | CCWWGG | 2 cut(s) | 1585, 1774 |
| TaaI | ACNGT | 7 cut(s) | 15, 36, 297, 320, 503, 1312, 1999 |
| TaiI | ACGT | 3 cut(s) | 1295, 1734, 1912 |
| TaqI | TCGA | 3 cut(s) | 618, 882, 891 |
| TaqII | GACCGA | 2 cut(s) | 451, 734 |
| TasI | AATT | 9 cut(s) | 361, 620, 793, 1015, 1076, 1436, 1544, 1562, 1739 |
| TauI | GCSGC | 4 cut(s) | 731, 845, 1058, 1814 |
| TfiI | GAWTC | 6 cut(s) | 166, 309, 1255, 1336, 1469, 1603 |
| Tru1I | TTAA | 1 cut(s) | 1989 |
| Tru9I | TTAA | 1 cut(s) | 1989 |
| TscAI | CASTG | 2 cut(s) | 526, 706 |
| TseFI | GTSAC | 2 cut(s) | 22, 701 |
| Tsp45I | GTSAC | 2 cut(s) | 22, 701 |
| TspDTI | ATGAA | 7 cut(s) | 33, 592, 1028, 1218, 1616, 1785, 1875 |
| TspGWI | ACGGA | 1 cut(s) | 1267 |
| TspRI | CASTG | 2 cut(s) | 526, 706 |
| VpaK11BI | GGWCC | 4 cut(s) | 463, 513, 717, 1921 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 586 |
| XapI | RAATTY | 4 cut(s) | 361, 1015, 1076, 1436 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 79, 184 |
| XmiI | GTMKAC | 1 cut(s) | 1299 |
| XspI | CTAG | 2 cut(s) | 768, 1854 |