FvH4_3g28410

zinc finger CCCH domain-containing protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
21367175 .. 21371704
4530 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g28410.t1

Sequence Viewer

Length: 2088 bp
ATGGGTTCTTTACAGTATGAAGTCACTAACCTACTGCTCGGAAAGATCAAGGCTTTGGAGCCTGAAAATGCCATCAAAATCATGGGTTATCTTCTCATACAAGATCTCGGTGAGAATGATTTGATGCGGTTGGCTTATGGCCCAGATACCCTTTTGCACTCTCTGATTGTCAGGGCTAAAATCCAGTTGGGACTTACTACCAACACTTCATCTTCTTCTGCATCTTCCACTCCCTCTTCTCCTTCCCCTCTGAACCCAATAGCCAGACCCACCAGCGCCTCCAACCCATTCTCTCAGTCCTCCCCAAGAATCCCAAACGGTGGTTTTGACTATGGTAAAAACCCATCTTCTCCTTCCTCCAATTCTTGGCCTCTTTCTGCCTTCCCCTCCAACTCCATTAGCCCCAAGTCCAGTCCTCTGCTTTCCTATGATAACATCCGCGCCGGGGCTGGAGGAGCGGGGTCGGTTTCACTTCCCTTGCATTCCAGGCACTCCGGCAAAGATGGTGATGTTTGGTCCGGTAATGATCTCATTGACGAGCACCAACTCAATGAGTACTTATCATTCTTGAATGAGTCCTCCTCCTCTTCCAGGCCTGACGATTTCATTGATCCCCGGCTTGAATTGGGTCATGGGATTCCGGACTGGGCTCATTCTCTCAACAATGGTGACTCTCCTTTGCACAGGAGGAGCTATTCGGCTAGTGATGCCTGTTTCGGGACTGAAGATGCTGCCCTGGGAGGGGGGTTCAAGCCGTGCCTCTACTTTGCTAGAGGGTTTTGCAAGAATGGGAGCAATTGCAAGTTTGTGCATGGCAGTTTTGGCGAGTCAGTGGATGCGGCCGGTGGTGGCATTGGCTCCCCGAGTAAGTTTGATGGTTTTGAGCAGCTACAGCATGAGGAGATGCTGAGGTTGAAGGCTGCTGCTCATCAGCAGAGATTAGTTGCTGCTGCTGCTTCTCAGTTTATGGCTGGAGGGCCATCGTCTCCTTACAACAAGTATATGAATTTCCTCTTGCAACAGCAAAACGATCCCCAAAGAGCTGCGGCAATCATGATGGCGGAAGACTTTTACAAATATGGACGGTGCCGACCTGAAAGGAACGACCTTCTGGCAATGGCTTCTGTTGAAAAGGCCACTTCTGCTTCCAGGCAGATCTACTTGACATTTCCAGCTGAGAGCACCTTTAGAGATGAAGATGTTTCAGAATACTTCAGCAAGTATGGGCCAGTTCAAGATGTACGAATTCCATACCAGCAGAAAAGAATGTTTGGGTTCGTTACATTTGTCTACCCAGAAACTGTCAGGCTCATACTGTCAAAAGGGAATCCACATTTTATATGTGAGTCGCGTGTGCTTGTCAAGCCCTATAAGGAGAAGGGAAAAGTCCTGGATAAGAGGCAACAACAACATCAAGAGAGGGGAGAATTTTCTCCATGTTTGAGCCCTGCTGGTCTTGATTCCAGAGATCCATATGAACTCCAACTGGGAGGAAGAATGCTCTTTGATACACAGGAGATGCTATTGAGAAGAAAATTAGAGGAGCAGGCTGAATTGCAGCAAGCCATTGAACTCCAAGGGAGAAGATTAATGAATCTGCAGCTGCCTGATTTCAAGAATAACCGCTTACCCCAGCACTATATACCCCATCACTTTCGCAGTCTATCTATGGGTGCTCCTGTTCCCTTGAGCCCTCAATCTCATGCCCAGATCAATCAAAATGTCATTCCATTTGATAGCTTCAAACAAGAAGTTGCAGAAGGCCTTGATGATATGCCAACTGCCTCATTTTCTATGTCTGCCACAGTTTCTGAGCAGCAACTTCAGAAACAAGTTAACAATGCCAATGACGAAGGCAAGGAGCAAAGCTCAGATGTTGAAGCTCATGATCTTCAAGAACGTGTGGAGCAGGTCCTTCCTGATAGCCTTTTTGCTTCTCCTAAGAATTCAGGTGGAGATCATACTACAGCCAAAGATCCTAACGAGACTATCGTAGTTTCTGAAAACAACTCATCAACATCTGTCGTAGTTTCTGAAAACAACTCATCAACATCTGTCAATTCTGCCACTTGTGTGGCTTCTCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

696

Amino Acids

76.29

Weight (kDa)

5.69

Isoelectric Point (pI)

55.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PABC_AtC3H46 PF23182 6 - 67 1.4e-26 AtC3H46 PABC domain
RRM_1 PF00076 397 - 440 1.7e-06 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1900
AccB1I GGYRCC 1 cut(s) 1086
AccB7I CCANNNNNTGG 2 cut(s) 320, 366
AccBSI CCGCTC 1 cut(s) 458
AccI GTMKAC 1 cut(s) 1290
AccII CGCG 2 cut(s) 441, 1351
AccIII TCCGGA 1 cut(s) 640
AciI CCGC 7 cut(s) 127, 439, 458, 839, 1046, 1061, 1624
AclWI GGATC 4 cut(s) 605, 1025, 1463, 1970
AcoI YGGCCR 1 cut(s) 840
AcsI RAATTY 4 cut(s) 1006, 1245, 1427, 1945
AcuI CTGAAG 3 cut(s) 744, 1198, 1808
AfaI GTAC 2 cut(s) 557, 1242
AfiI CCNNNNNNNGG 7 cut(s) 320, 366, 445, 591, 717, 741, 742
AflIII ACRYGT 1 cut(s) 1900
AjnI CCWGG 5 cut(s) 485, 590, 735, 1148, 1389
AleI CACNNNNGTG 1 cut(s) 2072
AluBI AGCT 8 cut(s) 693, 889, 1043, 1175, 1603, 1740, 1869, 1883
AluI AGCT 8 cut(s) 693, 889, 1043, 1175, 1603, 1740, 1869, 1883
Alw21I GWGCWC 3 cut(s) 543, 1184, 1678
Alw26I GTCTC 2 cut(s) 990, 1979
AlwI GGATC 4 cut(s) 605, 1025, 1463, 1970
AlwNI CAGNNNCTG 2 cut(s) 1301, 1811
Ama87I CYCGRG 1 cut(s) 862
Aor13HI TCCGGA 1 cut(s) 640
AoxI GGCC 8 cut(s) 139, 368, 593, 840, 977, 1134, 1226, 1762
ApoI RAATTY 4 cut(s) 1006, 1245, 1427, 1945
AseI ATTAAT 1 cut(s) 1589
AspLEI GCGC 2 cut(s) 278, 443
AspS9I GGNCC 5 cut(s) 140, 516, 977, 1226, 1912
AsuC2I CCSGG 2 cut(s) 445, 616
AsuHPI GGTGA 3 cut(s) 122, 518, 680
AvaI CYCGRG 1 cut(s) 862
AvaII GGWCC 2 cut(s) 516, 1912
BanI GGYRCC 1 cut(s) 1086
BanII GRGCYC 3 cut(s) 652, 1448, 1694
BbsI GAAGAC 1 cut(s) 1071
Bbv12I GWGCWC 3 cut(s) 543, 1184, 1678
BbvCI CCTCAGC 1 cut(s) 908
BccI CCATC 7 cut(s) 80, 352, 497, 869, 988, 1051, 1656
BceAI ACGGC 1 cut(s) 739
BciT130I CCWGG 5 cut(s) 487, 592, 737, 1150, 1391
BcnI CCSGG 2 cut(s) 445, 616
BcoDI GTCTC 2 cut(s) 990, 1979
BfaI CTAG 2 cut(s) 702, 771
BfmI CTRYAG 3 cut(s) 890, 1598, 1965
BfoI RGCGCY 1 cut(s) 279
BfuAI ACCTGC 1 cut(s) 1900
BglII AGATCT 2 cut(s) 103, 1155
BmcAI AGTACT 1 cut(s) 557
Bme1390I CCNGG 7 cut(s) 445, 487, 592, 616, 737, 1150, 1391
Bme18I GGWCC 2 cut(s) 516, 1912
BmeT110I CYCGRG 1 cut(s) 862
BmgT120I GGNCC 5 cut(s) 140, 516, 977, 1226, 1912
BmiI GGNNCC 3 cut(s) 60, 859, 1088
BmrFI CCNGG 7 cut(s) 445, 487, 592, 616, 737, 1150, 1391
BmrI ACTGGG 2 cut(s) 655, 1496
BmsI GCATC 7 cut(s) 114, 230, 697, 718, 826, 894, 1509
BmuI ACTGGG 2 cut(s) 655, 1496
BpiI GAAGAC 1 cut(s) 1071
BplI GAGNNNNNCTC 4 cut(s) 566, 598, 1853, 1885
BpmI CTGGAG 2 cut(s) 471, 993
Bpu10I CCTNAGC 1 cut(s) 908
BpuEI CTTGAG 1 cut(s) 1708
BpuMI CCSGG 2 cut(s) 445, 616
BsaJI CCNNGG 5 cut(s) 444, 614, 735, 736, 1576
BsaWI WCCGGW 2 cut(s) 518, 640
Bsc4I CCNNNNNNNGG 7 cut(s) 320, 366, 445, 591, 717, 741, 742
Bse118I RCCGGY 1 cut(s) 842
Bse1I ACTGG 5 cut(s) 184, 411, 650, 1229, 1491
Bse3DI GCAATG 1 cut(s) 1122
BseAI TCCGGA 1 cut(s) 640
BseBI CCWGG 5 cut(s) 487, 592, 737, 1150, 1391
BseDI CCNNGG 5 cut(s) 444, 614, 735, 736, 1576
BseGI GGATG 2 cut(s) 435, 841
BseLI CCNNNNNNNGG 7 cut(s) 320, 366, 445, 591, 717, 741, 742
BseMI GCAATG 1 cut(s) 1122
BseMII CTCAG 6 cut(s) 308, 899, 974, 1167, 1803, 1884
BseNI ACTGG 5 cut(s) 184, 411, 650, 1229, 1491
BseRI GAGGAG 6 cut(s) 468, 571, 574, 703, 914, 1556
BseX3I CGGCCG 1 cut(s) 840
BseYI CCCAGC 1 cut(s) 1632
Bsh1236I CGCG 2 cut(s) 441, 1351
Bsh1285I CGRYCG 1 cut(s) 843
BshFI GGCC 8 cut(s) 141, 370, 595, 842, 979, 1136, 1228, 1764
BshNI GGYRCC 1 cut(s) 1086
BsiEI CGRYCG 1 cut(s) 843
BsiHKAI GWGCWC 3 cut(s) 543, 1184, 1678
BsiHKCI CYCGRG 1 cut(s) 862
BsiSI CCGG 6 cut(s) 444, 495, 519, 616, 641, 843
BslFI GGGAC 2 cut(s) 204, 733
BslI CCNNNNNNNGG 7 cut(s) 320, 366, 445, 591, 717, 741, 742
BsmAI GTCTC 2 cut(s) 990, 1979
BsmBI CGTCTC 1 cut(s) 990
BsmFI GGGAC 2 cut(s) 204, 733
BsmI GAATGC 2 cut(s) 481, 1503
BsnI GGCC 8 cut(s) 141, 370, 595, 842, 979, 1136, 1228, 1764
BsoBI CYCGRG 1 cut(s) 862
Bsp1286I GDGCHC 6 cut(s) 543, 652, 1184, 1448, 1678, 1694
Bsp13I TCCGGA 1 cut(s) 640
BspACI CCGC 7 cut(s) 127, 439, 458, 839, 1046, 1061, 1624
BspANI GGCC 8 cut(s) 141, 370, 595, 842, 979, 1136, 1228, 1764
BspCNI CTCAG 6 cut(s) 307, 900, 973, 1168, 1804, 1883
BspEI TCCGGA 1 cut(s) 640
BspFNI CGCG 2 cut(s) 441, 1351
BspHI TCATGA 2 cut(s) 1053, 1885
BspLI GGNNCC 3 cut(s) 60, 859, 1088
BspMAI CTGCAG 1 cut(s) 1602
BspMI ACCTGC 1 cut(s) 1900
BspPI GGATC 4 cut(s) 605, 1025, 1463, 1970
BspT107I GGYRCC 1 cut(s) 1086
BsrBI CCGCTC 1 cut(s) 458
BsrDI GCAATG 1 cut(s) 1122
BsrFI RCCGGY 1 cut(s) 842
BsrI ACTGG 5 cut(s) 184, 411, 650, 1229, 1491
BssAI RCCGGY 1 cut(s) 842
BssECI CCNNGG 5 cut(s) 444, 614, 735, 736, 1576
BssT1I CCWWGG 1 cut(s) 1576
Bst2UI CCWGG 5 cut(s) 487, 592, 737, 1150, 1391
Bst4CI ACNGT 6 cut(s) 15, 320, 1086, 1303, 1317, 1807
Bst6I CTCTTC 2 cut(s) 241, 592
BstC8I GCNNGC 2 cut(s) 1548, 1563
BstDEI CTNAG 8 cut(s) 294, 908, 960, 1176, 1812, 1870, 1941, 2082
BstENI CCTNNNNNAGG 1 cut(s) 589
BstF5I GGATG 2 cut(s) 435, 841
BstFNI CGCG 2 cut(s) 441, 1351
BstH2I RGCGCY 1 cut(s) 279
BstHHI GCGC 2 cut(s) 278, 443
BstMAI GTCTC 2 cut(s) 990, 1979
BstMCI CGRYCG 1 cut(s) 843
BstMWI GCNNNNNNNGC 8 cut(s) 455, 487, 707, 822, 892, 953, 1142, 1363
BstNI CCWGG 5 cut(s) 487, 592, 737, 1150, 1391
BstSCI CCNGG 7 cut(s) 443, 485, 590, 614, 735, 1148, 1389
BstSFI CTRYAG 3 cut(s) 890, 1598, 1965
BstUI CGCG 2 cut(s) 441, 1351
BstV2I GAAGAC 1 cut(s) 1071
BstX2I RGATCY 4 cut(s) 103, 1155, 1468, 1975
BstXI CCANNNNNNTGG 1 cut(s) 2074
BstYI RGATCY 4 cut(s) 103, 1155, 1468, 1975
BstZI CGGCCG 1 cut(s) 840
BsuRI GGCC 8 cut(s) 141, 370, 595, 842, 979, 1136, 1228, 1764
BtsCI GGATG 2 cut(s) 435, 841
BtsIMutI CAGTG 1 cut(s) 837
BveI ACCTGC 1 cut(s) 1900
Cac8I GCNNGC 2 cut(s) 1548, 1563
CaiI CAGNNNCTG 2 cut(s) 1301, 1811
CciI TCATGA 2 cut(s) 1053, 1885
CfoI GCGC 2 cut(s) 278, 443
Cfr10I RCCGGY 1 cut(s) 842
Cfr13I GGNCC 5 cut(s) 140, 516, 977, 1226, 1912
Csp6I GTAC 2 cut(s) 556, 1241
CviAII CATG 8 cut(s) 82, 632, 812, 896, 1054, 1437, 1703, 1886
CviQI GTAC 2 cut(s) 556, 1241
DdeI CTNAG 8 cut(s) 294, 908, 960, 1176, 1812, 1870, 1941, 2082
EaeI YGGCCR 1 cut(s) 840
EagI CGGCCG 1 cut(s) 840
Eam1104I CTCTTC 2 cut(s) 241, 592
EarI CTCTTC 2 cut(s) 241, 592
EciI GGCGGA 1 cut(s) 1076
EclXI CGGCCG 1 cut(s) 840
Eco130I CCWWGG 1 cut(s) 1576
Eco147I AGGCCT 2 cut(s) 595, 1764
Eco24I GRGCYC 3 cut(s) 652, 1448, 1694
Eco47I GGWCC 2 cut(s) 516, 1912
Eco52I CGGCCG 1 cut(s) 840
Eco57I CTGAAG 3 cut(s) 744, 1198, 1808
Eco88I CYCGRG 1 cut(s) 862
EcoNI CCTNNNNNAGG 1 cut(s) 589
EcoO109I RGGNCCY 1 cut(s) 1912
EcoRI GAATTC 2 cut(s) 1245, 1945
EcoRII CCWGG 5 cut(s) 485, 590, 735, 1148, 1389
EcoT14I CCWWGG 1 cut(s) 1576
EcoT38I GRGCYC 3 cut(s) 652, 1448, 1694
ErhI CCWWGG 1 cut(s) 1576
Esp3I CGTCTC 1 cut(s) 990
FaeI CATG 8 cut(s) 85, 635, 815, 899, 1057, 1440, 1706, 1889
FaqI GGGAC 2 cut(s) 204, 733
FatI CATG 8 cut(s) 81, 631, 811, 895, 1053, 1436, 1702, 1885
FauI CCCGC 1 cut(s) 451
FauNDI CATATG 1 cut(s) 1474
FblI GTMKAC 1 cut(s) 1290
FokI GGATG 2 cut(s) 422, 848
FriOI GRGCYC 3 cut(s) 652, 1448, 1694
FspBI CTAG 2 cut(s) 702, 771
GlaI GCGC 2 cut(s) 277, 442
GsaI CCCAGC 1 cut(s) 1636
GsuI CTGGAG 2 cut(s) 471, 993
HaeII RGCGCY 1 cut(s) 279
HaeIII GGCC 8 cut(s) 141, 370, 595, 842, 979, 1136, 1228, 1764
HapII CCGG 6 cut(s) 444, 495, 519, 616, 641, 843
HhaI GCGC 2 cut(s) 278, 443
Hin1II CATG 8 cut(s) 85, 635, 815, 899, 1057, 1440, 1706, 1889
Hin6I GCGC 2 cut(s) 276, 441
HinP1I GCGC 2 cut(s) 276, 441
HincII GTYRAC 1 cut(s) 1837
HindII GTYRAC 1 cut(s) 1837
HinfI GANTC 9 cut(s) 309, 575, 637, 671, 827, 1327, 1346, 1460, 1594
HpaI GTTAAC 1 cut(s) 1837
HpaII CCGG 6 cut(s) 444, 495, 519, 616, 641, 843
HphI GGTGA 3 cut(s) 122, 518, 680
Hpy166II GTNNAC 2 cut(s) 1291, 1837
Hpy188I TCNGA 9 cut(s) 41, 165, 252, 1207, 1813, 1827, 1873, 2002, 2035
Hpy8I GTNNAC 2 cut(s) 1291, 1837
HpyAV CCTTC 9 cut(s) 252, 363, 391, 910, 1118, 1372, 1754, 1847, 1925
HpyCH4III ACNGT 6 cut(s) 15, 320, 1086, 1303, 1317, 1807
HpyCH4IV ACGT 1 cut(s) 1900
HpyF10VI GCNNNNNNNGC 8 cut(s) 455, 487, 707, 822, 892, 953, 1142, 1363
HpyF3I CTNAG 8 cut(s) 294, 908, 960, 1176, 1812, 1870, 1941, 2082
HpySE526I ACGT 1 cut(s) 1900
Hsp92II CATG 8 cut(s) 85, 635, 815, 899, 1057, 1440, 1706, 1889
HspAI GCGC 2 cut(s) 276, 441
Kpn2I TCCGGA 1 cut(s) 640
KspAI GTTAAC 1 cut(s) 1837
LmnI GCTCC 9 cut(s) 58, 455, 690, 792, 863, 1543, 1681, 1861, 1906
LweI GCATC 7 cut(s) 114, 230, 697, 718, 826, 894, 1509
MaeI CTAG 2 cut(s) 702, 771
MaeII ACGT 1 cut(s) 1900
MaeIII GTNAC 3 cut(s) 22, 668, 1279
MbiI CCGCTC 1 cut(s) 458
MfeI CAATTG 1 cut(s) 796
MflI RGATCY 4 cut(s) 103, 1155, 1468, 1975
MhlI GDGCHC 6 cut(s) 543, 652, 1184, 1448, 1678, 1694
MlyI GAGTC 4 cut(s) 584, 665, 836, 1355
MmeI TCCRAC 3 cut(s) 306, 414, 1507
MroI TCCGGA 1 cut(s) 640
MseI TTAA 2 cut(s) 1589, 1836
MslI CAYNNNNRTG 1 cut(s) 2072
MspA1I CMGCKG 2 cut(s) 1175, 1603
MspI CCGG 6 cut(s) 444, 495, 519, 616, 641, 843
MspR9I CCNGG 7 cut(s) 445, 487, 592, 616, 737, 1150, 1391
MunI CAATTG 1 cut(s) 796
Mva1269I GAATGC 2 cut(s) 481, 1503
MvaI CCWGG 5 cut(s) 487, 592, 737, 1150, 1391
MvnI CGCG 2 cut(s) 441, 1351
MwoI GCNNNNNNNGC 8 cut(s) 455, 487, 707, 822, 892, 953, 1142, 1363
NciI CCSGG 2 cut(s) 445, 616
NdeI CATATG 1 cut(s) 1474
NlaIII CATG 8 cut(s) 85, 635, 815, 899, 1057, 1440, 1706, 1889
NlaIV GGNNCC 3 cut(s) 60, 859, 1088
NmuCI GTSAC 2 cut(s) 22, 668
OliI CACNNNNGTG 1 cut(s) 2072
PagI TCATGA 2 cut(s) 1053, 1885
PasI CCCWGGG 1 cut(s) 736
PceI AGGCCT 2 cut(s) 595, 1764
PcsI WCGNNNNNNNCGW 1 cut(s) 1989
PctI GAATGC 2 cut(s) 481, 1503
PfeI GAWTC 5 cut(s) 309, 637, 1327, 1460, 1594
PflMI CCANNNNNTGG 2 cut(s) 320, 366
PfoI TCCNGGA 1 cut(s) 1389
PleI GAGTC 4 cut(s) 583, 665, 835, 1354
PpsI GAGTC 4 cut(s) 583, 665, 835, 1354
PpuMI RGGWCCY 1 cut(s) 1912
PshBI ATTAAT 1 cut(s) 1589
Psp5II RGGWCCY 1 cut(s) 1912
Psp6I CCWGG 5 cut(s) 485, 590, 735, 1148, 1389
PspFI CCCAGC 1 cut(s) 1632
PspGI CCWGG 5 cut(s) 485, 590, 735, 1148, 1389
PspN4I GGNNCC 3 cut(s) 60, 859, 1088
PspPI GGNCC 5 cut(s) 140, 516, 977, 1226, 1912
PspPPI RGGWCCY 1 cut(s) 1912
PstI CTGCAG 1 cut(s) 1602
PstNI CAGNNNCTG 2 cut(s) 1301, 1811
PsuI RGATCY 4 cut(s) 103, 1155, 1468, 1975
PvuII CAGCTG 2 cut(s) 1175, 1603
RsaI GTAC 2 cut(s) 557, 1242
RsaNI GTAC 2 cut(s) 556, 1241
RseI CAYNNNNRTG 1 cut(s) 2072
SaqAI TTAA 2 cut(s) 1589, 1836
Sau96I GGNCC 5 cut(s) 140, 516, 977, 1226, 1912
ScaI AGTACT 1 cut(s) 557
SchI GAGTC 4 cut(s) 584, 665, 836, 1355
ScrFI CCNGG 7 cut(s) 445, 487, 592, 616, 737, 1150, 1391
SduI GDGCHC 6 cut(s) 543, 652, 1184, 1448, 1678, 1694
SfaNI GCATC 7 cut(s) 114, 230, 697, 718, 826, 894, 1509
SfcI CTRYAG 3 cut(s) 890, 1598, 1965
SinI GGWCC 2 cut(s) 516, 1912
SmiMI CAYNNNNRTG 1 cut(s) 2072
SmlI CTYRAG 1 cut(s) 1687
SmoI CTYRAG 1 cut(s) 1687
SseBI AGGCCT 2 cut(s) 595, 1764
SsiI CCGC 7 cut(s) 127, 439, 458, 839, 1046, 1061, 1624
SspMI CTAG 2 cut(s) 702, 771
StuI AGGCCT 2 cut(s) 595, 1764
StyD4I CCNGG 7 cut(s) 443, 485, 590, 614, 735, 1148, 1389
StyI CCWWGG 1 cut(s) 1576
TaaI ACNGT 6 cut(s) 15, 320, 1086, 1303, 1317, 1807
TaiI ACGT 1 cut(s) 1903
TatI WGTACW 1 cut(s) 555
TauI GCSGC 2 cut(s) 842, 1049
TfiI GAWTC 5 cut(s) 309, 637, 1327, 1460, 1594
Tru1I TTAA 2 cut(s) 1589, 1836
Tru9I TTAA 2 cut(s) 1589, 1836
TscAI CASTG 1 cut(s) 837
TseFI GTSAC 2 cut(s) 22, 668
Tsp45I GTSAC 2 cut(s) 22, 668
TspDTI ATGAA 7 cut(s) 33, 198, 595, 1019, 1209, 1491, 1607
TspRI CASTG 1 cut(s) 837
Van91I CCANNNNNTGG 2 cut(s) 320, 366
VpaK11BI GGWCC 2 cut(s) 516, 1912
VspI ATTAAT 1 cut(s) 1589
XagI CCTNNNNNAGG 1 cut(s) 589
XapI RAATTY 4 cut(s) 1006, 1245, 1427, 1945
XcmI CCANNNNNNNNNTGG 1 cut(s) 79
XmiI GTMKAC 1 cut(s) 1290
XspI CTAG 2 cut(s) 702, 771
ZrmI AGTACT 1 cut(s) 557
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.