zinc finger CCCH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G51520 AT1G51520 AT1G51530 AT1G51530 AT3G21100 AT3G21100 AT3G21100 AT3G21100 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 |
| fragaria_vesca | FvH4_3g28410 FvH4_3g28410 FvH4_3g28410 |
| malus_domestica | MD00G1177200.v1.1 MD03G1171700.v1.1 MD11G1189200.v1.1 |
| prunus_persica | Prupe.4G255200_v2.0.a1 |
| pyrus_communis | pycom03g12880 pycom11g16560 |
| rosa_chinensis | RchiOBHm_Chr5g0053291 |
| rosa_laevigata | RLG00000034771 |
| rosa_multiflora | Rmu_sc0001966.1_g000018 |
| rosa_roxburghii | Rroxscaffold_1G00029030 |
| rosa_rugosa | Rorug05G0267800 Rorug05G0267900 |
| rosa_samantha | Rh5AG340200 Rh5BG350900 Rh5CG377100 Rh5DG364800 |
| rosa_wichuraiana | Rw5G032120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 41 |
| AccB1I | GGYRCC | 1 cut(s) | 41 |
| AfaI | GTAC | 1 cut(s) | 43 |
| AfeI | AGCGCT | 1 cut(s) | 28 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 102 |
| AgsI | TTSAA | 2 cut(s) | 131, 184 |
| AjiI | CACGTC | 1 cut(s) | 61 |
| AjnI | CCWGG | 1 cut(s) | 110 |
| Aor51HI | AGCGCT | 1 cut(s) | 28 |
| AoxI | GGCC | 2 cut(s) | 85, 93 |
| ApeKI | GCWGC | 1 cut(s) | 8 |
| Asp718I | GGTACC | 1 cut(s) | 41 |
| AspLEI | GCGC | 1 cut(s) | 29 |
| BanI | GGYRCC | 1 cut(s) | 41 |
| BccI | CCATC | 1 cut(s) | 32 |
| BciT130I | CCWGG | 1 cut(s) | 112 |
| BfaI | CTAG | 1 cut(s) | 147 |
| BfoI | RGCGCY | 1 cut(s) | 30 |
| BisI | GCNGC | 1 cut(s) | 9 |
| BlsI | GCNGC | 1 cut(s) | 10 |
| Bme1390I | CCNGG | 1 cut(s) | 112 |
| BmgBI | CACGTC | 1 cut(s) | 61 |
| BmiI | GGNNCC | 1 cut(s) | 43 |
| BmrFI | CCNGG | 1 cut(s) | 112 |
| BpuEI | CTTGAG | 1 cut(s) | 110 |
| BsaJI | CCNNGG | 1 cut(s) | 110 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 235, 265 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 102 |
| BseBI | CCWGG | 1 cut(s) | 112 |
| BseDI | CCNNGG | 1 cut(s) | 110 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 102 |
| BseRI | GAGGAG | 1 cut(s) | 130 |
| BshFI | GGCC | 2 cut(s) | 87, 95 |
| BshNI | GGYRCC | 1 cut(s) | 41 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 102 |
| BsnI | GGCC | 2 cut(s) | 87, 95 |
| BspANI | GGCC | 2 cut(s) | 87, 95 |
| BspLI | GGNNCC | 1 cut(s) | 43 |
| BspT107I | GGYRCC | 1 cut(s) | 41 |
| BssECI | CCNNGG | 1 cut(s) | 110 |
| Bst2UI | CCWGG | 1 cut(s) | 112 |
| BstH2I | RGCGCY | 1 cut(s) | 30 |
| BstHHI | GCGC | 1 cut(s) | 29 |
| BstNI | CCWGG | 1 cut(s) | 112 |
| BstSCI | CCNGG | 1 cut(s) | 110 |
| BsuRI | GGCC | 2 cut(s) | 87, 95 |
| BtrI | CACGTC | 1 cut(s) | 61 |
| CfoI | GCGC | 1 cut(s) | 29 |
| Csp6I | GTAC | 1 cut(s) | 42 |
| CviAII | CATG | 1 cut(s) | 17 |
| CviJI | RGCY | 7 cut(s) | 8, 56, 87, 95, 109, 203, 225 |
| CviKI_1 | RGCY | 7 cut(s) | 8, 56, 87, 95, 109, 203, 225 |
| CviQI | GTAC | 1 cut(s) | 42 |
| Eco147I | AGGCCT | 1 cut(s) | 95 |
| Eco47III | AGCGCT | 1 cut(s) | 28 |
| EcoRII | CCWGG | 1 cut(s) | 110 |
| FaeI | CATG | 1 cut(s) | 20 |
| FaiI | YATR | 1 cut(s) | 18 |
| FatI | CATG | 1 cut(s) | 16 |
| Fnu4HI | GCNGC | 1 cut(s) | 9 |
| Fsp4HI | GCNGC | 1 cut(s) | 9 |
| FspBI | CTAG | 1 cut(s) | 147 |
| GlaI | GCGC | 1 cut(s) | 28 |
| GluI | GCNGC | 1 cut(s) | 9 |
| HaeII | RGCGCY | 1 cut(s) | 30 |
| HaeIII | GGCC | 2 cut(s) | 87, 95 |
| HhaI | GCGC | 1 cut(s) | 29 |
| Hin1II | CATG | 1 cut(s) | 20 |
| Hin6I | GCGC | 1 cut(s) | 27 |
| HinP1I | GCGC | 1 cut(s) | 27 |
| Hpy188III | TCNNGA | 1 cut(s) | 241 |
| HpyAV | CCTTC | 3 cut(s) | 106, 125, 178 |
| HpyCH4IV | ACGT | 1 cut(s) | 60 |
| HpyCH4V | TGCA | 1 cut(s) | 233 |
| HpySE526I | ACGT | 1 cut(s) | 60 |
| Hsp92II | CATG | 1 cut(s) | 20 |
| HspAI | GCGC | 1 cut(s) | 27 |
| KpnI | GGTACC | 1 cut(s) | 45 |
| LpnPI | CCDG | 5 cut(s) | 15, 97, 121, 124, 226 |
| MaeI | CTAG | 1 cut(s) | 147 |
| MaeII | ACGT | 1 cut(s) | 60 |
| MboII | GAAGA | 1 cut(s) | 151 |
| MluCI | AATT | 1 cut(s) | 193 |
| MnlI | CCTC | 5 cut(s) | 85, 108, 181, 237, 278 |
| MseI | TTAA | 1 cut(s) | 171 |
| MspR9I | CCNGG | 1 cut(s) | 112 |
| MvaI | CCWGG | 1 cut(s) | 112 |
| NlaIII | CATG | 1 cut(s) | 20 |
| NlaIV | GGNNCC | 1 cut(s) | 43 |
| PceI | AGGCCT | 1 cut(s) | 95 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 66 |
| PkrI | GCNGC | 1 cut(s) | 10 |
| Psp6I | CCWGG | 1 cut(s) | 110 |
| PspGI | CCWGG | 1 cut(s) | 110 |
| PspN4I | GGNNCC | 1 cut(s) | 43 |
| RsaI | GTAC | 1 cut(s) | 43 |
| RsaNI | GTAC | 1 cut(s) | 42 |
| SaqAI | TTAA | 1 cut(s) | 171 |
| SatI | GCNGC | 1 cut(s) | 9 |
| ScrFI | CCNGG | 1 cut(s) | 112 |
| SetI | ASST | 3 cut(s) | 47, 63, 270 |
| SmlI | CTYRAG | 1 cut(s) | 89 |
| SmoI | CTYRAG | 1 cut(s) | 89 |
| Sse9I | AATT | 1 cut(s) | 193 |
| SseBI | AGGCCT | 1 cut(s) | 95 |
| SspMI | CTAG | 1 cut(s) | 147 |
| StuI | AGGCCT | 1 cut(s) | 95 |
| StyD4I | CCNGG | 1 cut(s) | 110 |
| TaiI | ACGT | 1 cut(s) | 63 |
| TasI | AATT | 1 cut(s) | 193 |
| Tru1I | TTAA | 1 cut(s) | 171 |
| Tru9I | TTAA | 1 cut(s) | 171 |
| TseI | GCWGC | 1 cut(s) | 8 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 118 |
| XspI | CTAG | 1 cut(s) | 147 |