Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0002653

Physical Location & Seq

Genomic Coordinates Reverse (-)

41161994 .. 41166994

Gene Structure 5001 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1177200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGGGTTCCTATGAACTTACAAACGTACTCTTCTCGAAGATCAAAACTTTAGACCCAGAAAATGCCATCAAAATCATGGGTTATCTTCTCATTCAGGATTTCGCCGAGAAGGATTTGATTCGTTTGGCTTATGGTCCGGAGACCCTTTTGCACTCGCTGATTCTGAGAGCTAGAATCCAGTTGGGACTTTTGGCAAACAGTTCGTCTGCATCGTCCACTCCTTCGTCTCCCTCACCGTTAAACCCCATAGCCAGACCAACCAACGGCAACCCATTTTCTCAGTCCTCTCCTAGAATACCAAACGGCTTTGACTTTGGAAAAACCCCTTCTTCGCCCTCTTCGAATTCCTGGCCGCTTTCTGGCTTTCCAAGCAACTCTGTTAGCCCAAAGGCAAGCCCTTTCCTCTCTTATGATAATATCCGGGCCGGGTCCTTTTCCCTTCCAGTACATTCACACCAGTTCAGTAAGGATGGTGGTGGTGATGGTTGGCCGGGAAGTGACCTCATCGAGGAGCACCAACTCAACGAATACCTCTCCTTTCTCAACGAGTCCTCTTCCTCGTCGATGCCGGAGGATTTCATTGATCCCAGGCTCGAATTGGGGCATGGAAGGAGCTATTCGGCCAGCGACGCGTGTCTCGAGTCCGAGGACCCTGCTTTGGGAGTTGGGTTCAAGCCATGTCTTTACTTTGCTAGAGGGTTTTGCAAGAATGGAAACAATTGCAAGTTTGTGCATGGCGATTTTGCTGATTCCGATGGTTCTGGTGCCATTGTGGGGTCTCCCAGTAATCTTGACGGTTTCGAACAGCACGAGGAGATGATGAGGTTGAAAGCCCAGCAACAGAGATTAGCTGCTGCCTCTCAGTTTATGGCTGGAGCGTCCCCTTCTTCGTACAATAAGTACATGAATTTCCTTTTGCAACAGCAGAATGATCCTCAGAGAGTTGCGGCAATGATGATGGGGGAAGAACTTTACAAGTTTGGGCGGTGTCGGCCTGATAGAAACGAACTTTTAGCAATGGCTTCTGTTGAAAAGGCAAGCTCGGCTTCAAGACAGATCTACTTGACATTCCCAGCCGAGAGCACTTTCAGAGATGAAGATGTTTCTGAATACTTCAGCAAGTTTGGGCCAGTTCAAGATGTAAGGATCCCATACCAGCAGAAGCGAATGTTTGGGTTCGTAACATTTGTCTACCCAGAAACTGTCAGGCTTATATTGTCGAAGGGAAACCCTCATTTTATATGTGATTCACGTGTGCTTGTCAAGCCCTACAAGGAGAAGGGAAAAATCCTGGATAAGAGGCAACAGCAACAACAGCATTTAGAGAGGGGAGAATTTTCACCATGTTTGAGCCCTGGTGGTCTTGATTCTAGGGATCCCTATGATCTCCCACTGGGGGGAAGAATGTTCTACAATACACAGGAGATGTTATTGAGAAGAAAATTGGAGGAGCAGGTTGAACTGCAGCAAGCCATTGAGCTACAAGGTAGAAGACTCATGAGTCTGCAGCTCCCGGACTGGAAGAATGATCGCTTACCCCATCATCACCGCAGTCTATCTGTTGGTGCTCATGGTCCTCCCTTGAGCCCTCATTCTCATGCTCAGATCAATCAAAATATCCTTCCATTTGACAGCACTGAACAAGAAGTTGCAGAAGACCACAGTGATACTCCAGCTGCCTCCATCTCTGTGACTGGTGCAGTTGCTGAGCTGCAGCAGCTTCAGATGGAAGATAATTTAGCTTTCATTCACAACAATGTCAATGGCAATGGAAATGGCAAAGACAAGGAGCAAGGCTCGAACCTGGATGCCCCAAATCTTCATAAAATTGTAGAGCAGGTCCTGCCTGATAGCCTCTTTGCTTCTCCTACAAATTCCGCTGGAGATCATCTCTCGGCCTTGTCAACCGCTGTACCCAAAGTTAATGATACCGCCATTACTACTGAAACAAACACATCATCATCGTCGTCGTCATCAGTCAATGCTGCTGGCTTCATTGCTTCTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 zf-CCCH

Protein Analysis

670

Amino Acids

73.56

Weight (kDa)

5.64

Isoelectric Point (pI)

55.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PABC_AtC3H46	PF23182	1 - 65	2.6e-28	AtC3H46 PABC domain
RRM_1	PF00076	364 - 410	1.1e-06	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002653)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51520 AT1G51520 AT1G51530 AT1G51530 AT3G21100 AT3G21100 AT3G21100 AT3G21100 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440
fragaria_vesca	FvH4_3g28410 FvH4_3g28410 FvH4_3g28410
malus_domestica	MD00G1177200.v1.1 MD03G1171700.v1.1 MD11G1189200.v1.1
prunus_persica	Prupe.4G255200_v2.0.a1
pyrus_communis	pycom03g12880 pycom11g16560
rosa_chinensis	RchiOBHm_Chr5g0053291
rosa_laevigata	RLG00000034771
rosa_multiflora	Rmu_sc0001966.1_g000018
rosa_roxburghii	Rroxscaffold_1G00029030
rosa_rugosa	Rorug05G0267800 Rorug05G0267900
rosa_samantha	Rh5AG340200 Rh5BG350900 Rh5CG377100 Rh5DG364800
rosa_wichuraiana	Rw5G032120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1500
Acc36I	ACCTGC	2 cut(s)	1444, 1828
AccB1I	GGYRCC	1 cut(s)	764
AccI	GTMKAC	1 cut(s)	1191
AccII	CGCG	1 cut(s)	632
AccIII	TCCGGA	1 cut(s)	136
AciI	CCGC	7 cut(s)	353, 947, 985, 1549, 1878, 1908, 1932
AclWI	GGATC	6 cut(s)	578, 926, 1141, 1154, 1370, 1383
AcoI	YGGCCR	3 cut(s)	350, 488, 621
AcsI	RAATTY	4 cut(s)	343, 907, 1334, 1873
AcuI	CTGAAG	2 cut(s)	1099, 1706
AcvI	CACGTG	1 cut(s)	1253
AfaI	GTAC	5 cut(s)	27, 447, 893, 902, 1914
AfiI	CCNNNNNNNGG	8 cut(s)	263, 359, 508, 658, 659, 774, 1396, 1397
AflIII	ACRYGT	2 cut(s)	630, 1252
AgsI	TTSAA	6 cut(s)	673, 829, 1031, 1050, 1136, 1460
AjnI	CCWGG	5 cut(s)	347, 587, 1290, 1354, 1803
Alw21I	GWGCWC	3 cut(s)	516, 1085, 1570
Alw26I	GTCTC	4 cut(s)	134, 231, 641, 783
AlwI	GGATC	6 cut(s)	578, 926, 1141, 1154, 1370, 1383
AlwNI	CAGNNNCTG	3 cut(s)	1202, 1706, 1843
Ama87I	CYCGRG	1 cut(s)	638
Aor13HI	TCCGGA	1 cut(s)	136
AoxI	GGCC	7 cut(s)	350, 423, 488, 621, 992, 1127, 1896
ApeKI	GCWGC	9 cut(s)	851, 854, 1465, 1507, 1676, 1711, 1714, 1717, 1985
ApoI	RAATTY	4 cut(s)	343, 907, 1334, 1873
ArsI	GACNNNNNNTTYG	2 cut(s)	188, 220
AspS9I	GGNCC	7 cut(s)	134, 423, 429, 649, 1127, 1574, 1840
AsuC2I	CCSGG	4 cut(s)	422, 427, 492, 1514
AsuHPI	GGTGA	4 cut(s)	225, 491, 1332, 1538
AsuII	TTCGAA	2 cut(s)	341, 801
AvaI	CYCGRG	1 cut(s)	638
AvaII	GGWCC	5 cut(s)	134, 429, 649, 1574, 1840
BaeI	ACNNNNGTAYC	2 cut(s)	1896, 1929
BamHI	GGATCC	2 cut(s)	1146, 1375
BanI	GGYRCC	1 cut(s)	764
BanII	GRGCYC	2 cut(s)	1355, 1589
BauI	CACGAG	1 cut(s)	809
BbrPI	CACGTG	1 cut(s)	1253
BbsI	GAAGAC	2 cut(s)	1498, 1662
Bbv12I	GWGCWC	3 cut(s)	516, 1085, 1570
BbvI	GCAGC	9 cut(s)	838, 841, 1477, 1519, 1663, 1698, 1726, 1729, 1972
BccI	CCATC	8 cut(s)	74, 464, 476, 749, 952, 1548, 1691, 1720
BceAI	ACGGC	2 cut(s)	280, 319
BcgI	CGANNNNNNTGC	4 cut(s)	183, 217, 635, 669
BciT130I	CCWGG	5 cut(s)	349, 589, 1292, 1356, 1805
BcnI	CCSGG	4 cut(s)	422, 427, 492, 1514
BcoDI	GTCTC	4 cut(s)	134, 231, 641, 783
BfaI	CTAG	4 cut(s)	171, 291, 693, 1371
BfmI	CTRYAG	3 cut(s)	1463, 1505, 1712
BfuAI	ACCTGC	2 cut(s)	1444, 1828
BglII	AGATCT	1 cut(s)	1056
BlpI	GCTNAGC	1 cut(s)	1707
Bme1390I	CCNGG	9 cut(s)	349, 422, 427, 492, 589, 1292, 1356, 1514, 1805
Bme18I	GGWCC	5 cut(s)	134, 429, 649, 1574, 1840
BmeT110I	CYCGRG	1 cut(s)	638
BmgT120I	GGNCC	7 cut(s)	134, 423, 429, 649, 1127, 1574, 1840
BmiI	GGNNCC	6 cut(s)	7, 430, 651, 766, 1148, 1377
BmrFI	CCNGG	9 cut(s)	349, 422, 427, 492, 589, 1292, 1356, 1514, 1805
BmrI	ACTGGG	2 cut(s)	777, 1403
BmsI	GCATC	3 cut(s)	218, 555, 1798
BmuI	ACTGGG	2 cut(s)	777, 1403
BoxI	GACNNNNGTC	1 cut(s)	633
BpiI	GAAGAC	2 cut(s)	1498, 1662
BplI	GAGNNNNNCTC	4 cut(s)	1781, 1813, 1875, 1907
BpmI	CTGGAG	3 cut(s)	894, 1656, 1902
Bpu1102I	GCTNAGC	1 cut(s)	1707
Bpu14I	TTCGAA	2 cut(s)	341, 801
BpuEI	CTTGAG	1 cut(s)	1603
BpuMI	CCSGG	4 cut(s)	422, 427, 492, 1514
BsaAI	YACGTR	1 cut(s)	1253
BsaI	GGTCTC	2 cut(s)	134, 783
BsaJI	CCNNGG	3 cut(s)	587, 645, 1354
BsaWI	WCCGGW	1 cut(s)	136
Bsc4I	CCNNNNNNNGG	8 cut(s)	263, 359, 508, 658, 659, 774, 1396, 1397
Bse1I	ACTGG	8 cut(s)	178, 443, 457, 783, 1130, 1398, 1523, 1699
Bse3DI	GCAATG	4 cut(s)	957, 1023, 1774, 1995
BseAI	TCCGGA	1 cut(s)	136
BseBI	CCWGG	5 cut(s)	349, 589, 1292, 1356, 1805
BseDI	CCNNGG	3 cut(s)	587, 645, 1354
BseGI	GGATG	2 cut(s)	475, 1813
BseLI	CCNNNNNNNGG	8 cut(s)	263, 359, 508, 658, 659, 774, 1396, 1397
BseMI	GCAATG	4 cut(s)	957, 1023, 1774, 1995
BseMII	CTCAG	6 cut(s)	155, 293, 875, 950, 1616, 1698
BseNI	ACTGG	8 cut(s)	178, 443, 457, 783, 1130, 1398, 1523, 1699
BseRI	GAGGAG	3 cut(s)	524, 827, 1463
BseXI	GCAGC	9 cut(s)	838, 841, 1477, 1519, 1663, 1698, 1726, 1729, 1972
BseYI	CCCAGC	2 cut(s)	834, 1072
BsgI	GTGCAG	1 cut(s)	1719
Bsh1236I	CGCG	1 cut(s)	632
BshFI	GGCC	7 cut(s)	352, 425, 490, 623, 994, 1129, 1898
BshNI	GGYRCC	1 cut(s)	764
BsiHKAI	GWGCWC	3 cut(s)	516, 1085, 1570
BsiHKCI	CYCGRG	1 cut(s)	638
BsiSI	CCGG	6 cut(s)	137, 421, 426, 491, 569, 1514
BslFI	GGGAC	2 cut(s)	198, 865
BslI	CCNNNNNNNGG	8 cut(s)	263, 359, 508, 658, 659, 774, 1396, 1397
BsmAI	GTCTC	4 cut(s)	134, 231, 641, 783
BsmBI	CGTCTC	1 cut(s)	231
BsmFI	GGGAC	2 cut(s)	198, 865
BsnI	GGCC	7 cut(s)	352, 425, 490, 623, 994, 1129, 1898
Bso31I	GGTCTC	2 cut(s)	134, 783
BsoBI	CYCGRG	1 cut(s)	638
Bsp119I	TTCGAA	2 cut(s)	341, 801
Bsp1286I	GDGCHC	5 cut(s)	516, 1085, 1355, 1570, 1589
Bsp13I	TCCGGA	1 cut(s)	136
Bsp1720I	GCTNAGC	1 cut(s)	1707
BspACI	CCGC	7 cut(s)	353, 947, 985, 1549, 1878, 1908, 1932
BspANI	GGCC	7 cut(s)	352, 425, 490, 623, 994, 1129, 1898
BspCNI	CTCAG	6 cut(s)	156, 292, 874, 949, 1615, 1699
BspEI	TCCGGA	1 cut(s)	136
BspFNI	CGCG	1 cut(s)	632
BspHI	TCATGA	1 cut(s)	1497
BspLI	GGNNCC	6 cut(s)	7, 430, 651, 766, 1148, 1377
BspMAI	CTGCAG	3 cut(s)	1467, 1509, 1716
BspMI	ACCTGC	2 cut(s)	1444, 1828
BspPI	GGATC	6 cut(s)	578, 926, 1141, 1154, 1370, 1383
BspT104I	TTCGAA	2 cut(s)	341, 801
BspT107I	GGYRCC	1 cut(s)	764
BspTNI	GGTCTC	2 cut(s)	134, 783
BsrDI	GCAATG	4 cut(s)	957, 1023, 1774, 1995
BsrI	ACTGG	8 cut(s)	178, 443, 457, 783, 1130, 1398, 1523, 1699
BssECI	CCNNGG	3 cut(s)	587, 645, 1354
BssSI	CACGAG	1 cut(s)	809
Bst2BI	CACGAG	1 cut(s)	809
Bst2UI	CCWGG	5 cut(s)	349, 589, 1292, 1356, 1805
Bst4CI	ACNGT	5 cut(s)	200, 237, 797, 1204, 1664
Bst6I	CTCTTC	3 cut(s)	35, 343, 559
BstAPI	GCANNNNNTGC	1 cut(s)	1843
BstBAI	YACGTR	1 cut(s)	1253
BstBI	TTCGAA	2 cut(s)	341, 801
BstC8I	GCNNGC	5 cut(s)	394, 625, 1039, 1470, 1990
BstDEI	CTNAG	6 cut(s)	164, 279, 861, 936, 1602, 1707
BstENI	CCTNNNNNAGG	1 cut(s)	506
BstF5I	GGATG	2 cut(s)	475, 1813
BstFNI	CGCG	1 cut(s)	632
BstMAI	GTCTC	4 cut(s)	134, 231, 641, 783
BstMWI	GCNNNNNNNGC	8 cut(s)	369, 629, 991, 1043, 1264, 1315, 1717, 1843
BstNI	CCWGG	5 cut(s)	349, 589, 1292, 1356, 1805
BstPAI	GACNNNNGTC	1 cut(s)	633
BstSCI	CCNGG	9 cut(s)	347, 420, 425, 490, 587, 1290, 1354, 1512, 1803
BstSFI	CTRYAG	3 cut(s)	1463, 1505, 1712
BstUI	CGCG	1 cut(s)	632
BstV1I	GCAGC	9 cut(s)	838, 841, 1477, 1519, 1663, 1698, 1726, 1729, 1972
BstV2I	GAAGAC	2 cut(s)	1498, 1662
BstX2I	RGATCY	3 cut(s)	1056, 1146, 1375
BstYI	RGATCY	3 cut(s)	1056, 1146, 1375
BsuRI	GGCC	7 cut(s)	352, 425, 490, 623, 994, 1129, 1898
BtsCI	GGATG	2 cut(s)	475, 1813
BtsIMutI	CAGTG	3 cut(s)	1391, 1635, 1669
BveI	ACCTGC	2 cut(s)	1444, 1828
Cac8I	GCNNGC	5 cut(s)	394, 625, 1039, 1470, 1990
CaiI	CAGNNNCTG	3 cut(s)	1202, 1706, 1843
CciI	TCATGA	1 cut(s)	1497
Cfr13I	GGNCC	7 cut(s)	134, 423, 429, 649, 1127, 1574, 1840
CseI	GACGC	2 cut(s)	638, 867
Csp6I	GTAC	5 cut(s)	26, 446, 892, 901, 1913
CviAII	CATG	9 cut(s)	76, 605, 678, 734, 904, 1344, 1498, 1571, 1598
CviQI	GTAC	5 cut(s)	26, 446, 892, 901, 1913
DdeI	CTNAG	6 cut(s)	164, 279, 861, 936, 1602, 1707
DrdI	GACNNNNNNGTC	1 cut(s)	1500
DseDI	GACNNNNNNGTC	1 cut(s)	1500
EaeI	YGGCCR	3 cut(s)	350, 488, 621
Eam1104I	CTCTTC	3 cut(s)	35, 343, 559
EarI	CTCTTC	3 cut(s)	35, 343, 559
Eco24I	GRGCYC	2 cut(s)	1355, 1589
Eco31I	GGTCTC	2 cut(s)	134, 783
Eco47I	GGWCC	5 cut(s)	134, 429, 649, 1574, 1840
Eco57I	CTGAAG	2 cut(s)	1099, 1706
Eco72I	CACGTG	1 cut(s)	1253
Eco88I	CYCGRG	1 cut(s)	638
EcoNI	CCTNNNNNAGG	1 cut(s)	506
EcoO109I	RGGNCCY	3 cut(s)	429, 649, 1840
EcoRI	GAATTC	1 cut(s)	343
EcoRII	CCWGG	5 cut(s)	347, 587, 1290, 1354, 1803
EcoT38I	GRGCYC	2 cut(s)	1355, 1589
Esp3I	CGTCTC	1 cut(s)	231
FaeI	CATG	9 cut(s)	79, 608, 681, 737, 907, 1347, 1501, 1574, 1601
FalI	AAGNNNNNCTT	2 cut(s)	1030, 1062
FaqI	GGGAC	2 cut(s)	198, 865
FatI	CATG	9 cut(s)	75, 604, 677, 733, 903, 1343, 1497, 1570, 1597
FblI	GTMKAC	1 cut(s)	1191
FokI	GGATG	2 cut(s)	482, 1820
FriOI	GRGCYC	2 cut(s)	1355, 1589
FspBI	CTAG	4 cut(s)	171, 291, 693, 1371
GsaI	CCCAGC	2 cut(s)	838, 1076
GsuI	CTGGAG	3 cut(s)	894, 1656, 1902
HaeIII	GGCC	7 cut(s)	352, 425, 490, 623, 994, 1129, 1898
HapII	CCGG	6 cut(s)	137, 421, 426, 491, 569, 1514
HgaI	GACGC	2 cut(s)	638, 867
Hin1II	CATG	9 cut(s)	79, 608, 681, 737, 907, 1347, 1501, 1574, 1601
HincII	GTYRAC	1 cut(s)	1905
HindII	GTYRAC	1 cut(s)	1905
HpaII	CCGG	6 cut(s)	137, 421, 426, 491, 569, 1514
HphI	GGTGA	4 cut(s)	225, 491, 1332, 1538
Hpy166II	GTNNAC	3 cut(s)	216, 1192, 1905
Hpy188I	TCNGA	8 cut(s)	165, 646, 754, 939, 1091, 1108, 1605, 1725
Hpy188III	TCNNGA	9 cut(s)	34, 95, 137, 638, 791, 1050, 1136, 1364, 1498
Hpy8I	GTNNAC	3 cut(s)	216, 1192, 1905
Hpy99I	CGWCG	4 cut(s)	565, 632, 1969, 1972
HpyAV	CCTTC	9 cut(s)	103, 231, 336, 449, 603, 894, 1216, 1273, 1631
HpyCH4III	ACNGT	5 cut(s)	200, 237, 797, 1204, 1664
HpyCH4IV	ACGT	2 cut(s)	24, 1252
HpyF10VI	GCNNNNNNNGC	8 cut(s)	369, 629, 991, 1043, 1264, 1315, 1717, 1843
HpyF3I	CTNAG	6 cut(s)	164, 279, 861, 936, 1602, 1707
HpySE526I	ACGT	2 cut(s)	24, 1252
Hsp92II	CATG	9 cut(s)	79, 608, 681, 737, 907, 1347, 1501, 1574, 1601
Kpn2I	TCCGGA	1 cut(s)	136
LmnI	GCTCC	6 cut(s)	511, 612, 875, 1450, 1515, 1789
Lsp1109I	GCAGC	9 cut(s)	838, 841, 1477, 1519, 1663, 1698, 1726, 1729, 1972
LweI	GCATC	3 cut(s)	218, 555, 1798
MaeI	CTAG	4 cut(s)	171, 291, 693, 1371
MaeII	ACGT	2 cut(s)	24, 1252
MaeIII	GTNAC	3 cut(s)	497, 1180, 1690
MfeI	CAATTG	1 cut(s)	718
MflI	RGATCY	3 cut(s)	1056, 1146, 1375
MhlI	GDGCHC	5 cut(s)	516, 1085, 1355, 1570, 1589
MluCI	AATT	9 cut(s)	343, 596, 718, 907, 1334, 1442, 1735, 1827, 1873
MluI	ACGCGT	1 cut(s)	630
MlyI	GAGTC	4 cut(s)	557, 650, 1488, 1510
MroI	TCCGGA	1 cut(s)	136
MseI	TTAA	2 cut(s)	239, 1923
MslI	CAYNNNNRTG	3 cut(s)	1596, 1688, 1755
MspA1I	CMGCKG	3 cut(s)	1676, 1880, 1910
MspI	CCGG	6 cut(s)	137, 421, 426, 491, 569, 1514
MspR9I	CCNGG	9 cut(s)	349, 422, 427, 492, 589, 1292, 1356, 1514, 1805
MunI	CAATTG	1 cut(s)	718
MvaI	CCWGG	5 cut(s)	349, 589, 1292, 1356, 1805
MvnI	CGCG	1 cut(s)	632
MwoI	GCNNNNNNNGC	8 cut(s)	369, 629, 991, 1043, 1264, 1315, 1717, 1843
NciI	CCSGG	4 cut(s)	422, 427, 492, 1514
NlaIII	CATG	9 cut(s)	79, 608, 681, 737, 907, 1347, 1501, 1574, 1601
NlaIV	GGNNCC	6 cut(s)	7, 430, 651, 766, 1148, 1377
NmeAIII	GCCGAG	4 cut(s)	130, 1022, 1102, 1874
NmuCI	GTSAC	2 cut(s)	497, 1690
NspV	TTCGAA	2 cut(s)	341, 801
PaeR7I	CTCGAG	1 cut(s)	638
PagI	TCATGA	1 cut(s)	1497
PcsI	WCGNNNNNNNCGW	4 cut(s)	209, 338, 636, 807
PfeI	GAWTC	6 cut(s)	118, 160, 174, 749, 1247, 1367
PfoI	TCCNGGA	2 cut(s)	1290, 1512
PleI	GAGTC	4 cut(s)	556, 649, 1488, 1509
PmaCI	CACGTG	1 cut(s)	1253
PmlI	CACGTG	1 cut(s)	1253
PpsI	GAGTC	4 cut(s)	556, 649, 1488, 1509
Ppu21I	YACGTR	1 cut(s)	1253
PpuMI	RGGWCCY	3 cut(s)	429, 649, 1840
PshAI	GACNNNNGTC	1 cut(s)	633
Psp5II	RGGWCCY	3 cut(s)	429, 649, 1840
Psp6I	CCWGG	5 cut(s)	347, 587, 1290, 1354, 1803
PspCI	CACGTG	1 cut(s)	1253
PspFI	CCCAGC	2 cut(s)	834, 1072
PspGI	CCWGG	5 cut(s)	347, 587, 1290, 1354, 1803
PspN4I	GGNNCC	6 cut(s)	7, 430, 651, 766, 1148, 1377
PspPI	GGNCC	7 cut(s)	134, 423, 429, 649, 1127, 1574, 1840
PspPPI	RGGWCCY	3 cut(s)	429, 649, 1840
PstI	CTGCAG	3 cut(s)	1467, 1509, 1716
PstNI	CAGNNNCTG	3 cut(s)	1202, 1706, 1843
PsuI	RGATCY	3 cut(s)	1056, 1146, 1375
PvuII	CAGCTG	1 cut(s)	1676
RsaI	GTAC	5 cut(s)	27, 447, 893, 902, 1914
RsaNI	GTAC	5 cut(s)	26, 446, 892, 901, 1913
RseI	CAYNNNNRTG	3 cut(s)	1596, 1688, 1755
SaqAI	TTAA	2 cut(s)	239, 1923
Sau96I	GGNCC	7 cut(s)	134, 423, 429, 649, 1127, 1574, 1840
SchI	GAGTC	4 cut(s)	557, 650, 1488, 1510
ScrFI	CCNGG	9 cut(s)	349, 422, 427, 492, 589, 1292, 1356, 1514, 1805
SduI	GDGCHC	5 cut(s)	516, 1085, 1355, 1570, 1589
SfaNI	GCATC	3 cut(s)	218, 555, 1798
SfcI	CTRYAG	3 cut(s)	1463, 1505, 1712
Sfr274I	CTCGAG	1 cut(s)	638
SfuI	TTCGAA	2 cut(s)	341, 801
SinI	GGWCC	5 cut(s)	134, 429, 649, 1574, 1840
SlaI	CTCGAG	1 cut(s)	638
SmiMI	CAYNNNNRTG	3 cut(s)	1596, 1688, 1755
SmlI	CTYRAG	2 cut(s)	638, 1582
SmoI	CTYRAG	2 cut(s)	638, 1582
Sse9I	AATT	9 cut(s)	343, 596, 718, 907, 1334, 1442, 1735, 1827, 1873
SsiI	CCGC	7 cut(s)	353, 947, 985, 1549, 1878, 1908, 1932
SspMI	CTAG	4 cut(s)	171, 291, 693, 1371
StyD4I	CCNGG	9 cut(s)	347, 420, 425, 490, 587, 1290, 1354, 1512, 1803
TaaI	ACNGT	5 cut(s)	200, 237, 797, 1204, 1664
TaiI	ACGT	2 cut(s)	27, 1255
TaqI	TCGA	9 cut(s)	35, 341, 507, 563, 594, 639, 801, 1220, 1799
TasI	AATT	9 cut(s)	343, 596, 718, 907, 1334, 1442, 1735, 1827, 1873
TatI	WGTACW	2 cut(s)	445, 900
TauI	GCSGC	2 cut(s)	355, 950
TfiI	GAWTC	6 cut(s)	118, 160, 174, 749, 1247, 1367
Tru1I	TTAA	2 cut(s)	239, 1923
Tru9I	TTAA	2 cut(s)	239, 1923
TscAI	CASTG	3 cut(s)	1398, 1642, 1669
TseFI	GTSAC	2 cut(s)	497, 1690
TseI	GCWGC	9 cut(s)	851, 854, 1465, 1507, 1676, 1711, 1714, 1717, 1985
Tsp45I	GTSAC	2 cut(s)	497, 1690
TspDTI	ATGAA	7 cut(s)	27, 568, 920, 1110, 1735, 1811, 1984
TspRI	CASTG	3 cut(s)	1398, 1642, 1669
VpaK11BI	GGWCC	5 cut(s)	134, 429, 649, 1574, 1840
XagI	CCTNNNNNAGG	1 cut(s)	506
XapI	RAATTY	4 cut(s)	343, 907, 1334, 1873
XcmI	CCANNNNNNNNNTGG	2 cut(s)	73, 595
XhoI	CTCGAG	1 cut(s)	638
XmiI	GTMKAC	1 cut(s)	1191
XspI	CTAG	4 cut(s)	171, 291, 693, 1371

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.