Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0002653

Physical Location & Seq

Genomic Coordinates Reverse (-)

53964645 .. 53968579

Gene Structure 3935 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G032120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGGGTTCTTTACAGTATGAAGTCACGAACCTACTGTTCGGAAAGATCAAGGCTTTGGAGCCTGAAAATGCCATCAAAATCATGGGCTATCTTCTCATACAAGATCTTGGCGAGAACGATTTGATGCGCCTGGCATATGGCCCAGATACCCTCCTGCACTCTCTGATTCTCAGAGCCAAAATCCAGTTGGGACTTTCCTCCAACACTTCGTCTTCTTCTGCATCTTCCACCCCATCTTCTCCTTCCCCTCTAAACCCCATAGCCAGACCCACCAGCGCCAGCAACCCATTCTCACAGTCCTCCCCCAGAATCCCAAACGGTGCTTTTGACTTTCCCAAAAACCCATCTTCTCCTTCCTCCAATTCCTGGCCTCTTTCTGCCTTCCCCAACAACTCCATTAGCCCCAAGTCCAGTCCTCTGCTCTCTTACGACAATATCCGGGCCGGCGCCGGAGCCGGCTCGGTCCCACTTCCCTTGCATTCCAAACACTCCGGCAAGGACGGTGATGTTTGGTCCGGCACTGACCTCATTGACGACCACCAACTCAGCGACTACTTGTCTTTCCTCAATGAGACCTCCTCCTCTTCCAGGCCCGACGATTTCATTGATCCCCGGCTCGAATTGGGCCACGGGGTTCCCGACTGGGCTCACTCTCTCAACAATGGCGACGCCCACTTGCACAGGAGGAGCTATTCGGCCAGTGACGCCTGTTTCGGGACCGAAGACGCCGCCCTGGGTGGCGGCTTCAAGCCCTGCCTCTACTTTGCTAGAGGGTTTTGCAAGAATGGGAGCAATTGCAAGTTTGTGCATGGCGGTTTCGGCGAGTCGGTCGATGCCGGTGCCGCTGCTGGTGGTGGCATTGTGGGCTCCCCGAGTAAGTTCGATGGTTTCGAGCAGCTACAGCATGAGGAGATGCTGAGGTTGAAGGCTGCTGCCCATCAACAGAGATTAGCTGCTGCTGCTTCTCAGTTTATGGCTGGAGGAGGCCCATCTTCTCCTTACAACAAGTATATGAATTTCCTCTTGCAACAGCAAAATGATCCCCAAAGAGCTGCGGCAATCATGATGGGGGAAGAATTTTACAAGTATGGGCGGTGCCGACCTGAAAGGAACGACCTTTTGGCAATGGCTTCTGTTGAAAAGGCCACCTCGGCTTCCAGGCAGATCTACTTGACATTCCCAGCTGAGAGCACCTTTAGAGATGAAGATGTTTCGGAATACTTCAGCAAGTATGGGCCAGTTCAAGATGTACGGATTCCATATCAGCAGAAAAGAATGTTTGGGTTTGTTACGTTTGTCTACCCAGAAACTGTCAGGCTCATATTGTCCAAAGGGAATCCACATTTTATATGCGAGTCGCGTGTTCTTGTCAAGCCCTATAAGGAGAAGGGAAAAGTCCTGGATAAGAGGCAACAACAGCATCAAGAGAGGGGGGAATTTTCACCATGTTTGAGCCCTGCTGGTCTTGATTCCAGAGATCCATATGAGCTCCAACTTGGAGGAAGAATGCTCTATGATACACAGGAGATGCTATTGAGAAGAAAATTGGAGGAGCAGGCTGAATTGCAGCAAGCCATTGAACTCCAAGGGAGAAGACTAATGAATCTGCAGCTGCCTGACTTCAAGAATAACCGCTTACCCCAGCACTATCTACCCCATCACTTCCGCAGTCTATCTGTGGGCCTTGGTGATATGCCACCTGCCTCATTTTCTATATCTGCCGCGGTTTCTGAGCAGCAACTTCAGAAGGAAGTCAACAATGCTAGTGATGAAGGCAAGGAGCAAGGCTCAGATGTTGAAGCTCATGATCTTCATGAACGTGTGGAGCAGGTCCTTCCTGATAGCCTTTTTGCGTCTCCTAAGCATTCAGGTGGAGATCATACTGCAGCAGGAGATCTTAATGAGACTGTCGTAGTTTCTGAAAACAACTCATCAACATCTGTCAATCCTGCTATTTGCACGGCTTCTCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 zf-CCCH

Protein Analysis

657

Amino Acids

71.92

Weight (kDa)

5.88

Isoelectric Point (pI)

52.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PABC_AtC3H46	PF23182	6 - 68	1.3e-27	AtC3H46 PABC domain
RRM_1	PF00076	400 - 443	1.6e-06	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002653)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51520 AT1G51520 AT1G51530 AT1G51530 AT3G21100 AT3G21100 AT3G21100 AT3G21100 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440 AT5G12440
fragaria_vesca	FvH4_3g28410 FvH4_3g28410 FvH4_3g28410
malus_domestica	MD00G1177200.v1.1 MD03G1171700.v1.1 MD11G1189200.v1.1
prunus_persica	Prupe.4G255200_v2.0.a1
pyrus_communis	pycom03g12880 pycom11g16560
rosa_chinensis	RchiOBHm_Chr5g0053291
rosa_laevigata	RLG00000034771
rosa_multiflora	Rmu_sc0001966.1_g000018
rosa_roxburghii	Rroxscaffold_1G00029030
rosa_rugosa	Rorug05G0267800 Rorug05G0267900
rosa_samantha	Rh5AG340200 Rh5BG350900 Rh5CG377100 Rh5DG364800
rosa_wichuraiana	Rw5G032120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1708
Acc36I	ACCTGC	2 cut(s)	1708, 1819
AccB1I	GGYRCC	3 cut(s)	446, 839, 1095
AccB7I	CCANNNNNTGG	1 cut(s)	366
AccI	GTMKAC	1 cut(s)	1299
AccII	CGCG	2 cut(s)	1360, 1724
AclWI	GGATC	3 cut(s)	602, 1034, 1472
AcoI	YGGCCR	1 cut(s)	696
AcsI	RAATTY	3 cut(s)	1015, 1076, 1436
AcuI	CTGAAG	2 cut(s)	1207, 1727
AcyI	GRCGYC	4 cut(s)	447, 669, 705, 726
AfaI	GTAC	1 cut(s)	1251
AfiI	CCNNNNNNNGG	3 cut(s)	366, 588, 714
AflIII	ACRYGT	1 cut(s)	1819
AgsI	TTSAA	7 cut(s)	748, 925, 1139, 1244, 1580, 1624, 1799
AhdI	GACNNNNNGTC	1 cut(s)	556
AjnI	CCWGG	6 cut(s)	129, 365, 587, 732, 1157, 1398
AjuI	GAANNNNNNNTTGG	2 cut(s)	1103, 1135
AluBI	AGCT	8 cut(s)	690, 898, 953, 1052, 1184, 1489, 1612, 1802
AluI	AGCT	8 cut(s)	690, 898, 953, 1052, 1184, 1489, 1612, 1802
Alw21I	GWGCWC	2 cut(s)	1193, 1491
Alw26I	GTCTC	3 cut(s)	566, 1860, 1898
AlwI	GGATC	3 cut(s)	602, 1034, 1472
AlwNI	CAGNNNCTG	1 cut(s)	1310
Ama87I	CYCGRG	1 cut(s)	871
ApoI	RAATTY	3 cut(s)	1015, 1076, 1436
ArsI	GACNNNNNNTTYG	2 cut(s)	695, 727
AspLEI	GCGC	3 cut(s)	129, 278, 449
AsuC2I	CCSGG	2 cut(s)	440, 613
AsuHPI	GGTGA	3 cut(s)	515, 1434, 1700
AvaI	CYCGRG	1 cut(s)	871
AvaII	GGWCC	4 cut(s)	463, 513, 717, 1831
BanI	GGYRCC	3 cut(s)	446, 839, 1095
BanII	GRGCYC	4 cut(s)	649, 869, 1457, 1491
BbsI	GAAGAC	3 cut(s)	204, 729, 1600
Bbv12I	GWGCWC	2 cut(s)	1193, 1491
BbvCI	CCTCAGC	1 cut(s)	917
BccI	CCATC	8 cut(s)	80, 241, 352, 878, 945, 997, 1060, 1665
BcgI	CGANNNNNNTGC	2 cut(s)	821, 855
BciT130I	CCWGG	6 cut(s)	131, 367, 589, 734, 1159, 1400
BcnI	CCSGG	2 cut(s)	440, 613
BcoDI	GTCTC	3 cut(s)	566, 1860, 1898
BfaI	CTAG	2 cut(s)	768, 1764
BfmI	CTRYAG	3 cut(s)	899, 1607, 1884
BfoI	RGCGCY	2 cut(s)	279, 450
BfuAI	ACCTGC	2 cut(s)	1708, 1819
BglI	GCCNNNNNGGC	1 cut(s)	1151
BglII	AGATCT	3 cut(s)	103, 1164, 1894
Bme1390I	CCNGG	8 cut(s)	131, 367, 440, 589, 613, 734, 1159, 1400
Bme18I	GGWCC	4 cut(s)	463, 513, 717, 1831
BmeRI	GACNNNNNGTC	1 cut(s)	556
BmeT110I	CYCGRG	1 cut(s)	871
BmiI	GGNNCC	9 cut(s)	60, 448, 454, 465, 636, 718, 841, 868, 1097
BmrFI	CCNGG	8 cut(s)	131, 367, 440, 589, 613, 734, 1159, 1400
BmrI	ACTGGG	1 cut(s)	652
BmsI	GCATC	6 cut(s)	114, 230, 823, 903, 1429, 1518
BmuI	ACTGGG	1 cut(s)	652
BpiI	GAAGAC	3 cut(s)	204, 729, 1600
BplI	GAGNNNNNCTC	4 cut(s)	563, 595, 1772, 1804
BpmI	CTGGAG	1 cut(s)	999
Bpu10I	CCTNAGC	2 cut(s)	917, 1860
BpuMI	CCSGG	2 cut(s)	440, 613
BsaHI	GRCGYC	4 cut(s)	447, 669, 705, 726
BsaI	GGTCTC	1 cut(s)	566
BsaJI	CCNNGG	8 cut(s)	611, 628, 732, 733, 1149, 1585, 1684, 1722
Bsc4I	CCNNNNNNNGG	3 cut(s)	366, 588, 714
Bse118I	RCCGGY	3 cut(s)	443, 455, 836
Bse1I	ACTGG	5 cut(s)	184, 411, 647, 699, 1238
Bse3DI	GCAATG	1 cut(s)	1131
BseBI	CCWGG	6 cut(s)	131, 367, 589, 734, 1159, 1400
BseDI	CCNNGG	8 cut(s)	611, 628, 732, 733, 1149, 1585, 1684, 1722
BseLI	CCNNNNNNNGG	3 cut(s)	366, 588, 714
BseMI	GCAATG	1 cut(s)	1131
BseMII	CTCAG	7 cut(s)	184, 559, 908, 980, 1176, 1722, 1803
BseNI	ACTGG	5 cut(s)	184, 411, 647, 699, 1238
BseRI	GAGGAG	6 cut(s)	568, 571, 700, 923, 996, 1565
BseYI	CCCAGC	2 cut(s)	1180, 1641
BsgI	GTGCAG	1 cut(s)	140
Bsh1236I	CGCG	2 cut(s)	1360, 1724
Bsh1285I	CGRYCG	1 cut(s)	831
BshNI	GGYRCC	3 cut(s)	446, 839, 1095
BsiEI	CGRYCG	1 cut(s)	831
BsiHKAI	GWGCWC	2 cut(s)	1193, 1491
BsiHKCI	CYCGRG	1 cut(s)	871
BsiSI	CCGG	8 cut(s)	439, 444, 450, 456, 492, 516, 613, 837
BslFI	GGGAC	3 cut(s)	204, 449, 730
BslI	CCNNNNNNNGG	3 cut(s)	366, 588, 714
BsmAI	GTCTC	3 cut(s)	566, 1860, 1898
BsmBI	CGTCTC	1 cut(s)	1860
BsmFI	GGGAC	3 cut(s)	204, 449, 730
BsmI	GAATGC	3 cut(s)	478, 1512, 1864
Bso31I	GGTCTC	1 cut(s)	566
BsoBI	CYCGRG	1 cut(s)	871
Bsp1286I	GDGCHC	5 cut(s)	649, 869, 1193, 1457, 1491
Bsp143I	GATC	9 cut(s)	45, 103, 607, 1039, 1164, 1477, 1807, 1876, 1894
BspCNI	CTCAG	7 cut(s)	183, 558, 909, 979, 1177, 1723, 1802
BspFNI	CGCG	2 cut(s)	1360, 1724
BspHI	TCATGA	3 cut(s)	1062, 1804, 1813
BspLI	GGNNCC	9 cut(s)	60, 448, 454, 465, 636, 718, 841, 868, 1097
BspMAI	CTGCAG	2 cut(s)	1611, 1888
BspMI	ACCTGC	2 cut(s)	1708, 1819
BspPI	GGATC	3 cut(s)	602, 1034, 1472
BspT107I	GGYRCC	3 cut(s)	446, 839, 1095
BspTNI	GGTCTC	1 cut(s)	566
BsrDI	GCAATG	1 cut(s)	1131
BsrFI	RCCGGY	3 cut(s)	443, 455, 836
BsrI	ACTGG	5 cut(s)	184, 411, 647, 699, 1238
BssAI	RCCGGY	3 cut(s)	443, 455, 836
BssECI	CCNNGG	8 cut(s)	611, 628, 732, 733, 1149, 1585, 1684, 1722
BssMI	GATC	9 cut(s)	45, 103, 607, 1039, 1164, 1477, 1807, 1876, 1894
BssNI	GRCGYC	4 cut(s)	447, 669, 705, 726
BssT1I	CCWWGG	2 cut(s)	1585, 1684
Bst2UI	CCWGG	6 cut(s)	131, 367, 589, 734, 1159, 1400
Bst4CI	ACNGT	7 cut(s)	15, 36, 297, 320, 503, 1312, 1909
Bst6I	CTCTTC	1 cut(s)	589
BstACI	GRCGYC	4 cut(s)	447, 669, 705, 726
BstC8I	GCNNGC	5 cut(s)	280, 445, 457, 1557, 1572
BstDEI	CTNAG	9 cut(s)	170, 545, 917, 966, 1185, 1731, 1789, 1860, 1968
BstDSI	CCRYGG	2 cut(s)	628, 1722
BstENI	CCTNNNNNAGG	1 cut(s)	586
BstFNI	CGCG	2 cut(s)	1360, 1724
BstH2I	RGCGCY	2 cut(s)	279, 450
BstHHI	GCGC	3 cut(s)	129, 278, 449
BstKTI	GATC	9 cut(s)	48, 106, 610, 1042, 1167, 1480, 1810, 1879, 1897
BstMAI	GTCTC	3 cut(s)	566, 1860, 1898
BstMBI	GATC	9 cut(s)	45, 103, 607, 1039, 1164, 1477, 1807, 1876, 1894
BstMCI	CGRYCG	1 cut(s)	831
BstMWI	GCNNNNNNNGC	8 cut(s)	704, 819, 842, 864, 901, 959, 1151, 1417
BstNI	CCWGG	6 cut(s)	131, 367, 589, 734, 1159, 1400
BstSCI	CCNGG	8 cut(s)	129, 365, 438, 587, 611, 732, 1157, 1398
BstSFI	CTRYAG	3 cut(s)	899, 1607, 1884
BstUI	CGCG	2 cut(s)	1360, 1724
BstV2I	GAAGAC	3 cut(s)	204, 729, 1600
BstX2I	RGATCY	4 cut(s)	103, 1164, 1477, 1894
BstYI	RGATCY	4 cut(s)	103, 1164, 1477, 1894
BtgI	CCRYGG	2 cut(s)	628, 1722
BtsIMutI	CAGTG	2 cut(s)	519, 706
BveI	ACCTGC	2 cut(s)	1708, 1819
Cac8I	GCNNGC	5 cut(s)	280, 445, 457, 1557, 1572
CaiI	CAGNNNCTG	1 cut(s)	1310
CciI	TCATGA	3 cut(s)	1062, 1804, 1813
CfoI	GCGC	3 cut(s)	129, 278, 449
Cfr10I	RCCGGY	3 cut(s)	443, 455, 836
Cfr42I	CCGCGG	1 cut(s)	1725
CseI	GACGC	4 cut(s)	677, 713, 734, 1842
Csp6I	GTAC	1 cut(s)	1250
CspCI	CAANNNNNGTGG	2 cut(s)	456, 491
CviAII	CATG	7 cut(s)	82, 809, 905, 1063, 1446, 1805, 1814
CviQI	GTAC	1 cut(s)	1250
DdeI	CTNAG	9 cut(s)	170, 545, 917, 966, 1185, 1731, 1789, 1860, 1968
DinI	GGCGCC	1 cut(s)	448
DpnI	GATC	9 cut(s)	47, 105, 609, 1041, 1166, 1479, 1809, 1878, 1896
DpnII	GATC	9 cut(s)	45, 103, 607, 1039, 1164, 1477, 1807, 1876, 1894
DriI	GACNNNNNGTC	1 cut(s)	556
EaeI	YGGCCR	1 cut(s)	696
Eam1104I	CTCTTC	1 cut(s)	589
Eam1105I	GACNNNNNGTC	1 cut(s)	556
EarI	CTCTTC	1 cut(s)	589
Ecl136II	GAGCTC	1 cut(s)	1489
Eco130I	CCWWGG	2 cut(s)	1585, 1684
Eco24I	GRGCYC	4 cut(s)	649, 869, 1457, 1491
Eco31I	GGTCTC	1 cut(s)	566
Eco47I	GGWCC	4 cut(s)	463, 513, 717, 1831
Eco53kI	GAGCTC	1 cut(s)	1489
Eco57I	CTGAAG	2 cut(s)	1207, 1727
Eco88I	CYCGRG	1 cut(s)	871
EcoICRI	GAGCTC	1 cut(s)	1489
EcoNI	CCTNNNNNAGG	1 cut(s)	586
EcoO109I	RGGNCCY	1 cut(s)	1831
EcoRII	CCWGG	6 cut(s)	129, 365, 587, 732, 1157, 1398
EcoT14I	CCWWGG	2 cut(s)	1585, 1684
EcoT38I	GRGCYC	4 cut(s)	649, 869, 1457, 1491
EgeI	GGCGCC	1 cut(s)	448
EheI	GGCGCC	1 cut(s)	448
ErhI	CCWWGG	2 cut(s)	1585, 1684
Esp3I	CGTCTC	1 cut(s)	1860
FaeI	CATG	7 cut(s)	85, 812, 908, 1066, 1449, 1808, 1817
FaqI	GGGAC	3 cut(s)	204, 449, 730
FatI	CATG	7 cut(s)	81, 808, 904, 1062, 1445, 1804, 1813
FauNDI	CATATG	2 cut(s)	136, 1483
FblI	GTMKAC	1 cut(s)	1299
FriOI	GRGCYC	4 cut(s)	649, 869, 1457, 1491
FspBI	CTAG	2 cut(s)	768, 1764
GlaI	GCGC	3 cut(s)	128, 277, 448
GsaI	CCCAGC	2 cut(s)	1184, 1645
GsuI	CTGGAG	1 cut(s)	999
HaeII	RGCGCY	2 cut(s)	279, 450
HapII	CCGG	8 cut(s)	439, 444, 450, 456, 492, 516, 613, 837
HgaI	GACGC	4 cut(s)	677, 713, 734, 1842
HhaI	GCGC	3 cut(s)	129, 278, 449
Hin1I	GRCGYC	4 cut(s)	447, 669, 705, 726
Hin1II	CATG	7 cut(s)	85, 812, 908, 1066, 1449, 1808, 1817
Hin6I	GCGC	3 cut(s)	127, 276, 447
HinP1I	GCGC	3 cut(s)	127, 276, 447
HincII	GTYRAC	1 cut(s)	1756
HindII	GTYRAC	1 cut(s)	1756
HinfI	GANTC	8 cut(s)	166, 309, 824, 1255, 1336, 1355, 1469, 1603
HpaII	CCGG	8 cut(s)	439, 444, 450, 456, 492, 516, 613, 837
HphI	GGTGA	3 cut(s)	515, 1434, 1700
Hpy166II	GTNNAC	2 cut(s)	1300, 1756
Hpy188I	TCNGA	8 cut(s)	41, 165, 173, 1216, 1732, 1746, 1792, 1921
Hpy8I	GTNNAC	2 cut(s)	1300, 1756
Hpy99I	CGWCG	2 cut(s)	599, 671
HpyAV	CCTTC	8 cut(s)	252, 363, 391, 919, 1381, 1741, 1766, 1844
HpyCH4III	ACNGT	7 cut(s)	15, 36, 297, 320, 503, 1312, 1909
HpyCH4IV	ACGT	2 cut(s)	1292, 1819
HpyF10VI	GCNNNNNNNGC	8 cut(s)	704, 819, 842, 864, 901, 959, 1151, 1417
HpyF3I	CTNAG	9 cut(s)	170, 545, 917, 966, 1185, 1731, 1789, 1860, 1968
HpySE526I	ACGT	2 cut(s)	1292, 1819
Hsp92I	GRCGYC	4 cut(s)	447, 669, 705, 726
Hsp92II	CATG	7 cut(s)	85, 812, 908, 1066, 1449, 1808, 1817
HspAI	GCGC	3 cut(s)	127, 276, 447
KasI	GGCGCC	1 cut(s)	446
KroI	GCCGGC	2 cut(s)	443, 455
KroNI	GCCGGC	2 cut(s)	445, 457
KspI	CCGCGG	1 cut(s)	1725
Kzo9I	GATC	9 cut(s)	45, 103, 607, 1039, 1164, 1477, 1807, 1876, 1894
LmnI	GCTCC	9 cut(s)	58, 452, 687, 789, 872, 1494, 1552, 1780, 1825
LweI	GCATC	6 cut(s)	114, 230, 823, 903, 1429, 1518
MaeI	CTAG	2 cut(s)	768, 1764
MaeII	ACGT	2 cut(s)	1292, 1819
MaeIII	GTNAC	3 cut(s)	22, 701, 1288
MalI	GATC	9 cut(s)	47, 105, 609, 1041, 1166, 1479, 1809, 1878, 1896
MboI	GATC	9 cut(s)	45, 103, 607, 1039, 1164, 1477, 1807, 1876, 1894
MfeI	CAATTG	1 cut(s)	793
MflI	RGATCY	4 cut(s)	103, 1164, 1477, 1894
MhlI	GDGCHC	5 cut(s)	649, 869, 1193, 1457, 1491
MluCI	AATT	8 cut(s)	361, 620, 793, 1015, 1076, 1436, 1544, 1562
Mly113I	GGCGCC	1 cut(s)	447
MlyI	GAGTC	2 cut(s)	833, 1364
MmeI	TCCRAC	2 cut(s)	225, 1516
MroNI	GCCGGC	2 cut(s)	443, 455
MseI	TTAA	1 cut(s)	1899
MslI	CAYNNNNRTG	2 cut(s)	1818, 1869
MspA1I	CMGCKG	4 cut(s)	845, 1184, 1612, 1724
MspI	CCGG	8 cut(s)	439, 444, 450, 456, 492, 516, 613, 837
MspR9I	CCNGG	8 cut(s)	131, 367, 440, 589, 613, 734, 1159, 1400
MunI	CAATTG	1 cut(s)	793
Mva1269I	GAATGC	3 cut(s)	478, 1512, 1864
MvaI	CCWGG	6 cut(s)	131, 367, 589, 734, 1159, 1400
MvnI	CGCG	2 cut(s)	1360, 1724
MwoI	GCNNNNNNNGC	8 cut(s)	704, 819, 842, 864, 901, 959, 1151, 1417
NaeI	GCCGGC	2 cut(s)	445, 457
NarI	GGCGCC	1 cut(s)	447
NciI	CCSGG	2 cut(s)	440, 613
NdeI	CATATG	2 cut(s)	136, 1483
NdeII	GATC	9 cut(s)	45, 103, 607, 1039, 1164, 1477, 1807, 1876, 1894
NgoMIV	GCCGGC	2 cut(s)	443, 455
NlaIII	CATG	7 cut(s)	85, 812, 908, 1066, 1449, 1808, 1817
NlaIV	GGNNCC	9 cut(s)	60, 448, 454, 465, 636, 718, 841, 868, 1097
NmeAIII	GCCGAG	1 cut(s)	1130
NmuCI	GTSAC	2 cut(s)	22, 701
PagI	TCATGA	3 cut(s)	1062, 1804, 1813
PaqCI	CACCTGC	1 cut(s)	1708
PasI	CCCWGGG	1 cut(s)	733
PcsI	WCGNNNNNNNCGW	2 cut(s)	636, 888
PctI	GAATGC	3 cut(s)	478, 1512, 1864
PdiI	GCCGGC	2 cut(s)	445, 457
PfeI	GAWTC	6 cut(s)	166, 309, 1255, 1336, 1469, 1603
PflMI	CCANNNNNTGG	1 cut(s)	366
PfoI	TCCNGGA	1 cut(s)	1398
PleI	GAGTC	2 cut(s)	832, 1363
PluTI	GGCGCC	1 cut(s)	450
PpsI	GAGTC	2 cut(s)	832, 1363
PpuMI	RGGWCCY	1 cut(s)	1831
Psp124BI	GAGCTC	1 cut(s)	1491
Psp5II	RGGWCCY	1 cut(s)	1831
Psp6I	CCWGG	6 cut(s)	129, 365, 587, 732, 1157, 1398
PspFI	CCCAGC	2 cut(s)	1180, 1641
PspGI	CCWGG	6 cut(s)	129, 365, 587, 732, 1157, 1398
PspN4I	GGNNCC	9 cut(s)	60, 448, 454, 465, 636, 718, 841, 868, 1097
PspPPI	RGGWCCY	1 cut(s)	1831
PstI	CTGCAG	2 cut(s)	1611, 1888
PstNI	CAGNNNCTG	1 cut(s)	1310
PsuI	RGATCY	4 cut(s)	103, 1164, 1477, 1894
PvuII	CAGCTG	2 cut(s)	1184, 1612
RsaI	GTAC	1 cut(s)	1251
RsaNI	GTAC	1 cut(s)	1250
RseI	CAYNNNNRTG	2 cut(s)	1818, 1869
SacI	GAGCTC	1 cut(s)	1491
SacII	CCGCGG	1 cut(s)	1725
SaqAI	TTAA	1 cut(s)	1899
Sau3AI	GATC	9 cut(s)	45, 103, 607, 1039, 1164, 1477, 1807, 1876, 1894
SchI	GAGTC	2 cut(s)	833, 1364
ScrFI	CCNGG	8 cut(s)	131, 367, 440, 589, 613, 734, 1159, 1400
SduI	GDGCHC	5 cut(s)	649, 869, 1193, 1457, 1491
SfaNI	GCATC	6 cut(s)	114, 230, 823, 903, 1429, 1518
SfcI	CTRYAG	3 cut(s)	899, 1607, 1884
SfoI	GGCGCC	1 cut(s)	448
Sfr303I	CCGCGG	1 cut(s)	1725
SgrBI	CCGCGG	1 cut(s)	1725
SinI	GGWCC	4 cut(s)	463, 513, 717, 1831
SmiMI	CAYNNNNRTG	2 cut(s)	1818, 1869
Sse9I	AATT	8 cut(s)	361, 620, 793, 1015, 1076, 1436, 1544, 1562
SspDI	GGCGCC	1 cut(s)	446
SspMI	CTAG	2 cut(s)	768, 1764
SstI	GAGCTC	1 cut(s)	1491
StyD4I	CCNGG	8 cut(s)	129, 365, 438, 587, 611, 732, 1157, 1398
StyI	CCWWGG	2 cut(s)	1585, 1684
TaaI	ACNGT	7 cut(s)	15, 36, 297, 320, 503, 1312, 1909
TaiI	ACGT	2 cut(s)	1295, 1822
TaqI	TCGA	4 cut(s)	618, 831, 882, 891
TaqII	GACCGA	3 cut(s)	451, 734, 817
TasI	AATT	8 cut(s)	361, 620, 793, 1015, 1076, 1436, 1544, 1562
TauI	GCSGC	5 cut(s)	731, 744, 845, 1058, 1724
TfiI	GAWTC	6 cut(s)	166, 309, 1255, 1336, 1469, 1603
Tru1I	TTAA	1 cut(s)	1899
Tru9I	TTAA	1 cut(s)	1899
TscAI	CASTG	2 cut(s)	526, 706
TseFI	GTSAC	2 cut(s)	22, 701
Tsp45I	GTSAC	2 cut(s)	22, 701
TspDTI	ATGAA	8 cut(s)	33, 592, 1028, 1218, 1616, 1785, 1802, 1830
TspGWI	ACGGA	1 cut(s)	1267
TspRI	CASTG	2 cut(s)	526, 706
Van91I	CCANNNNNTGG	1 cut(s)	366
VpaK11BI	GGWCC	4 cut(s)	463, 513, 717, 1831
XagI	CCTNNNNNAGG	1 cut(s)	586
XapI	RAATTY	3 cut(s)	1015, 1076, 1436
XcmI	CCANNNNNNNNNTGG	2 cut(s)	79, 184
XmiI	GTMKAC	1 cut(s)	1299
XspI	CTAG	2 cut(s)	768, 1764

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.