Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005246

Physical Location & Seq

Genomic Coordinates Reverse (-)

4410314 .. 4415622

Gene Structure 5309 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G13680.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3960 bp

ATGAAAAATTTGAAGCTTTTCTCGGAGGTTCCTCAGAACATCCAATTGCATTCGACTGAAGAAGTTGTACAGTTCGCAGCTTATGACATCGACCAAAGTCGCTTATTTTTCGCATCTTCTGCTAATTTCGTTTACGCCCTTCAGCTCTCTTCCTTCCAAAATGAAAGCGCTGGGGCAAAGAGTGCTATGCCTGTGGAGGTCTGCAGTATTGATATTGAGCCTGGGGATTTCATCACGGCTTTCGATTATCTCGCGGAGAAGGAGTCTCTATTAATTGGGACTTCTCATGGGCTTTTGCTAGTGCATAATGTGGAGAGTGATGTGACTGAGCTAGTTGGAAATATAGAAGGAGGTGTCAAGTGTATCTCGCCTAATCCGACTGGAGATCTACTTGGATTGATTACTGGTCTTGGGCAGTTGCTTGTAATGACTTATGATTGGGCTTTGATGTACGAGAAGGCGCTTGGAGAGGTTCCTGAAGGTGGTTACGTACGTGAAACGAATGATTTGTCTGTAAATTGTGGGGGTATTTCCATTTCCTGGAGGGGTGATGGAAAGTATTTTGCGACTATGGGTGAGGTTTATGAGTCTGGTTGTATGTCTAAGAAGATTAAGATATGGGAAAGTGATTCCGGTGCTTTGCAGTCTTCTTCAGAAACAAAAGAATTTACGCAGGGGATTCTTGAATGGATGCCGAGTGGTGCTAAAATCGCAGCTGTTTATAAGAGGAAGTCAGATGATAGCAGTCCATCGATTGCTTTCTTTGAGAGGAATGGACTTGAGAGAAGCTCGTTTAGAATTGGTGAACCAGAAGATGCTACGGAATCATGTGAAAATCTGAAATGGAATTCTGCATCAGATCTTCTTGCAGGGGTTGTTAGTTGTAAAACATATGATGCCATTAGGGTGTGGTTCTTTAGCAACAACCACTGGTACCTGAAACAGGAGATTAGGTATCCAAGGGAAGCTGGGGTAACAGTCATGTGGGATCCAACAAAGCCACTGCAGTTAATATGTTGGACTCTGTCAGGGCAGGTGTCTGTTCGCCACTTTATGTGGGTAACAGCGGTCATGGAGGACTCAACAGCCTTTGTCATAGATAACTCCAAGATACTCGTGACACCACTATCTTTGTCCTTGATGCCACCTCCTATGTATTTGTTCAGCCTTAGTTTTTCTTCTGCTGTCAGAGATATAGCATATTACTCAAGGAATTCTAAGAATTGTCTGGCTGTGTTTTTGTCAGATGGAAACCTGTCTTTTGTTGAGTTCCCTGCACCTAATACTTGGGAAGATCTCGAAGGCAAAGACTTCAGTGTGGAAATTTCAGACTGTAAAACAGCACTGGGCTCTTTTGTACATCTTCTATGGTTGGATGTCCACTCACTTCTGTGTGTCTCCGCTTATGGTTCTAGCCACAACAAGTGTCTCTCTTCGGGAGGGTATGACACAGAGCTTCATGGTTCTTATTTACAAGAAGTTGAAGTAGTCTGTCATGAGGATCATGTTCCTGATCAAGTGACTTGCTCTGGCTTTAAGGCTAGCATTACTTTCCAGACACTTCTCGAATCACCGGTCCTGGCTCTTGCCTGGAATCCTAGTAAGCGTGATTCAGCCTTTGTGGAGTTTGAGGGTGGGAAAGTGCTTGGATATGCGTCAAGGTCAGAAATTATGGAAACTCGTAGTAGTGATGATAGTGTATGTTTTCCATCGACTTGTCCTTGGGTGAGGGTGGCACAGGTTGATGCTAGTGGGGTGCATAAACCCTTGATATGTGGGCTTGATGATATGGGTAGACTGTCCATCAACGGGAAGAACCTATGTAATAACTGTAGCAGTTTCTCATTTTATTCAGAGTTGGCCAATGAAGTAGTTACCCATCTGATTATTTTGACCAAACAGGATTTTCTCTTTATTGTCGATACCAAGGATGTACTGAATGGAGATGTGGCACTTGGAAATGTGTTCTTTGTTATTGATGGTAGAAGGCGAGACGAGGAAAATATGAGCTATGTTAATATTTGGGAAAGAGGTGCAAAAGTGATAGGAGTCCTCAATGGAGATGAAGCTGCTGTGATATTACAAACTATGCGGGGGAATCTCGAATGCATATATCCCAGAAAGCTGGTCCTCTCTTCCATTACGAATGCGTTAGCTCAGCAACGGTTCAAAGATGCATTTAACTTGGTAAGGCGTCATAGAATCGACTTTAATGTTATCGTGGATCTATATGGGTGGCAGGCATTTCTACAGTCAGCCGTAGCATTTGTTGAGCAAGTAAACAATTTGAACCATGTTACAGAATTTGTTTGTGCCATGAAGAATGAAGATGTTACAGAAACGCTGTACAAAAAGTTTTCCTTTTCCAAAAAGGGAGACGAGGTTTTTCGTGTGAAAGATAGTTGCAGTAACAAAGTATCATCAGTTCTACAGGCAATTAGGAAGGCCCTTGAAGAACATATCCCAGAAAGTCCATCAAGGGAACTCTGTATTTTGACCACTCTTGCCCGAAGTGATCCACCAGCTATCGAAGAATCTCTTTTGAGGATAAAATCTGTTCGTGAAATGGAGTTGCTAAACTCTTCTGATGATATAAGGAAAAAGTCTTGTCCATCTGCAGAAGAAGCCTTGAAACATCTTCTGTGGTTATTGGATTCTGAGGCTGTCTTTGAAGCTGCCTTAGGTCTTTATGATCTGAACCTTGCAGCTATTGTGGCACTCAATTCCCAGCGTGATCCAAAAGAATTTTTACCTTATCTCCAGGAGCTGGAAAAAATGCCCGAATCCCTGATGCATTTCAAGATTGACATTAAATTGCAGCGTTTTGATAGTGCTCTTAGGAACATTGTATCAGCAGGGGTTGGCTACTTTCCTGATTGCATGAACTTAATAAAGAAAAACCCTCAACTTTTCCCTCTGGGCCTCCTGCTAATTACTGATCCTGAGAAGAAACTAGTTGTTCTAGAGGCTTGGGCAGATCACCTCATTGATGAAAAACGTTTTGAGGATGCTGCTACTACATACCTATGTTGCTGTAAACTGGAAAAGGCTTCAAAGGCATATCGTGAATGTGGTGACTGGAGTGGGGTACTCCGAGTGGGGGCGCTAATGAAATTAGGTAAAGATGAGATCTTGAAATTGGCATATGAACTCTGTGAAGAGGTCAATGCTCTTGGGAAACCAGCGGAAGCAGCAAAAATAGCGCTTGAGTATTGCAGCGATATAAGCGGTGGAATTAGTTTGCTTATCAATGCGAGGGAATGGGAAGAGGCTTTAAGGGTTGCATTTTTGCATACAGCAGATGATAGAATCTCAGTGGTGAAAAGTTCTGCTTTGGAGTGTGCTAGTGGTCTAGTAAGTGAATTCAAAGAATCAATAGAAAAGGTAGGAAAATATTTGACTCGCTATCTAGCTGTCCGGCAGAGACGATTATTGCTTGCAGCAAAGCTCAAATCCGAGGAACGATCTGTTGTTGATCTTGACGATGACACAGCTTCAGAAGCAAGTAGCAACCTGAGTGGAATGAGCGCCTATACTTTGGGGACAAGGAGAGGTTCTGCTGCTTCAGTCAGCTCAAGCAACGCTACTAGCAGGGCAAGAGATTTGAGGCGCCAGAGAAAGAGTGGGAAAATCCGTGCTGGCAGTGCGGGTGAGGAGATGGCTCTTGTTGATCATTTGAAAGGTATGCGTATGACCGATGGAGGAAAGCGAGAGCTGAAGTCGTTGTTGATATGTCTGGTAACACTTGGTGAAATGGAGTCTGCACAGAAGTTGCAACAGACTGCAGAGAATTTCCAGGTCTCCCAAGTAGCAGCTGTAGAGCTAGCACACGATACAGTGTCCAGCGAGAGCGTAGATGAAGAAGTTTATTGCTTTGAACGTTACGCTCAGAAGACGAGATCCACAGCACGAGATTCAGATGCCTTTAGCTGGATGCTTAAGGTCTTCATAAGCCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0001510 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0006950 GO:0006979 GO:0007275 GO:0008033 GO:0008150 GO:0008152 GO:0008283 GO:0008284 GO:0009451 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009787 GO:0009892 GO:0009965 GO:0009966 GO:0009987 GO:0010016 GO:0010033 GO:0010154 GO:0010467 GO:0010646 GO:0010928 GO:0016070 GO:0019222 GO:0022414 GO:0023051 GO:0030488 GO:0031537 GO:0031538 GO:0032259 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0033588 GO:0033993 GO:0034470 GO:0034641 GO:0034660 GO:0035265 GO:0040007 GO:0042127 GO:0042221 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048366 GO:0048367 GO:0048518 GO:0048519 GO:0048522 GO:0048530 GO:0048583 GO:0048589 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051716 GO:0061458 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0080090 GO:0080178 GO:0090304 GO:0090698 GO:0097305 GO:0097306 GO:0099402 GO:1901360 GO:1901419 GO:1901700 GO:1901701 GO:1905392 GO:1905957 GO:2000024 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IKI3

Protein Analysis

1319

Amino Acids

146.62

Weight (kDa)

5.15

Isoelectric Point (pI)

44.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_ELP1_1st	PF04762	1 - 176	3e-29	ELP1 first N-terminal beta-propeller
Beta-prop_ELP1_1st	PF04762	175 - 332	4.4e-53	ELP1 first N-terminal beta-propeller
Beta-prop_ELP1_2nd	PF23797	365 - 682	1e-60	ELP1 N-terminal second beta-propeller
A-sol_ELP1	PF23925	707 - 923	1.8e-48	ELP1 alpha-solenoid
TPR_ELP1	PF23878	932 - 1093	7.4e-21	ELP1 TPR domain
HB_ELP1	PF23936	1106 - 1264	4.3e-13	ELP1 three-helix bundle

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005246)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13680
fragaria_vesca	FvH4_7g21920 FvH4_7g21920 FvH4_7g21920 FvH4_7g21920 FvH4_7g21920
malus_domestica	MD01G1123800.v1.1 MD07G1193500.v1.1
prunus_persica	Prupe.2G231100_v2.0.a1 Prupe.2G231100_v2.0.a1 Prupe.2G231100_v2.0.a1 Prupe.2G231100_v2.0.a1
pyrus_communis	pycom01g15030 pycom07g18260
rosa_chinensis	RchiOBHm_Chr1g0366221
rosa_laevigata	RLG00000019775 RLG00000027362
rosa_multiflora	Rmu_co8487329.1_g000001 Rmu_sc0003736.1_g000001 Rmu_sc0009109.1_g000005 Rmu_sc0020121.1_g000003
rosa_rugosa	Rorug01G0328000
rosa_samantha	Rh1AG336100 Rh1BG297500 Rh1CG313400 Rh1DG329200 Rh6AG107900
rosa_wichuraiana	Rw1G029810 Rw6G009290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	723
AarI	CACCTGC	1 cut(s)	1024
Acc36I	ACCTGC	1 cut(s)	1024
Acc65I	GGTACC	1 cut(s)	933
AccB1I	GGYRCC	2 cut(s)	933, 3609
AccB7I	CCANNNNNTGG	2 cut(s)	540, 2767
AccI	GTMKAC	1 cut(s)	1795
AccII	CGCG	1 cut(s)	254
AciI	CCGC	7 cut(s)	254, 1067, 1401, 2092, 3185, 3228, 3647
AclI	AACGTT	2 cut(s)	2998, 3880
AclWI	GGATC	8 cut(s)	983, 996, 1509, 2232, 2510, 2729, 2933, 3894
AcoI	YGGCCR	1 cut(s)	1860
AcsI	RAATTY	9 cut(s)	7, 665, 847, 1213, 1323, 2303, 2744, 3362, 3790
AcuI	CTGAAG	8 cut(s)	78, 125, 498, 636, 1297, 3480, 3549, 3737
AcyI	GRCGYC	2 cut(s)	2194, 3610
AdeI	CACNNNGTG	1 cut(s)	3749
AfaI	GTAC	8 cut(s)	69, 452, 492, 935, 1359, 1935, 2348, 3090
AfeI	AGCGCT	2 cut(s)	169, 3204
AfiI	CCNNNNNNNGG	7 cut(s)	482, 540, 943, 1809, 2767, 3100, 3930
AflII	CTTAAG	1 cut(s)	3938
AgeI	ACCGGT	1 cut(s)	1573
AhlI	ACTAGT	1 cut(s)	2953
AjnI	CCWGG	6 cut(s)	220, 539, 1578, 1589, 2760, 3795
AleI	CACNNNNGTG	1 cut(s)	1390
Alw21I	GWGCWC	1 cut(s)	2836
Alw26I	GTCTC	7 cut(s)	270, 1402, 1433, 1986, 2370, 3418, 3805
AlwI	GGATC	8 cut(s)	983, 996, 1509, 2232, 2510, 2729, 2933, 3894
AlwNI	CAGNNNCTG	1 cut(s)	2767
Aor51HI	AGCGCT	2 cut(s)	169, 3204
AoxI	GGCC	3 cut(s)	1860, 2445, 2920
ApoI	RAATTY	9 cut(s)	7, 665, 847, 1213, 1323, 2303, 2744, 3362, 3790
ArsI	GACNNNNNNTTYG	4 cut(s)	494, 526, 1560, 1592
AseI	ATTAAT	1 cut(s)	272
AsiGI	ACCGGT	1 cut(s)	1573
Asp700I	GAANNNNTTC	1 cut(s)	17
Asp718I	GGTACC	1 cut(s)	933
AspLEI	GCGC	6 cut(s)	170, 463, 3106, 3205, 3530, 3612
AspS9I	GGNCC	4 cut(s)	1576, 2128, 2446, 2920
AsuNHI	GCTAGC	2 cut(s)	1541, 3823
AvaII	GGWCC	2 cut(s)	1576, 2128
AxyI	CCTNAGG	1 cut(s)	2680
BalI	TGGCCA	1 cut(s)	1862
BamHI	GGATCC	1 cut(s)	988
BanI	GGYRCC	2 cut(s)	933, 3609
BanII	GRGCYC	1 cut(s)	1352
BarI	GAAGNNNNNNTAC	2 cut(s)	51, 83
BauI	CACGAG	2 cut(s)	1115, 3909
BbsI	GAAGAC	3 cut(s)	639, 3899, 3937
Bbv12I	GWGCWC	1 cut(s)	2836
BceAI	ACGGC	2 cut(s)	252, 2243
BciT130I	CCWGG	6 cut(s)	222, 541, 1580, 1591, 2762, 3797
BciVI	GTATCC	1 cut(s)	966
BclI	TGATCA	2 cut(s)	1513, 3670
BcoDI	GTCTC	7 cut(s)	270, 1402, 1433, 1986, 2370, 3418, 3805
BcuI	ACTAGT	1 cut(s)	2953
BfmI	CTRYAG	8 cut(s)	202, 1004, 1831, 2249, 2429, 2616, 3783, 3816
BfoI	RGCGCY	6 cut(s)	171, 464, 3107, 3206, 3531, 3613
BfrI	CTTAAG	1 cut(s)	3938
BfuAI	ACCTGC	1 cut(s)	1024
BfuI	GTATCC	1 cut(s)	966
BglII	AGATCT	4 cut(s)	385, 859, 1294, 3129
BlpI	GCTNAGC	1 cut(s)	2157
Bme1390I	CCNGG	6 cut(s)	222, 541, 1580, 1591, 2762, 3797
Bme18I	GGWCC	2 cut(s)	1576, 2128
BmgT120I	GGNCC	4 cut(s)	1576, 2128, 2446, 2920
BmiI	GGNNCC	5 cut(s)	30, 474, 935, 990, 3611
BmrFI	CCNGG	6 cut(s)	222, 541, 1580, 1591, 2762, 3797
BmrI	ACTGGG	1 cut(s)	1355
BmtI	GCTAGC	2 cut(s)	1545, 3827
BmuI	ACTGGG	1 cut(s)	1355
BoxI	GACNNNNGTC	1 cut(s)	96
BpiI	GAAGAC	3 cut(s)	639, 3899, 3937
BplI	GAGNNNNNCTC	2 cut(s)	773, 805
BpmI	CTGGAG	4 cut(s)	402, 562, 2744, 3100
Bpu1102I	GCTNAGC	1 cut(s)	2157
BpuEI	CTTGAG	4 cut(s)	800, 1192, 3227, 3559
Bsa29I	ATCGAT	1 cut(s)	752
BsaAI	YACGTR	2 cut(s)	490, 494
BsaHI	GRCGYC	2 cut(s)	2194, 3610
BsaI	GGTCTC	1 cut(s)	3805
BsaJI	CCNNGG	5 cut(s)	221, 959, 1721, 1926, 3456
BsaWI	WCCGGW	2 cut(s)	632, 1573
BsaXI	ACNNNNNCTCC	8 cut(s)	248, 278, 938, 968, 2367, 2397, 2742, 2772
Bsc4I	CCNNNNNNNGG	7 cut(s)	482, 540, 943, 1809, 2767, 3100, 3930
Bse118I	RCCGGY	1 cut(s)	1573
Bse1I	ACTGG	6 cut(s)	385, 409, 935, 1350, 3045, 3083
Bse21I	CCTNAGG	1 cut(s)	2680
BseBI	CCWGG	6 cut(s)	222, 541, 1580, 1591, 2762, 3797
BseCI	ATCGAT	1 cut(s)	752
BseDI	CCNNGG	5 cut(s)	221, 959, 1721, 1926, 3456
BseGI	GGATG	6 cut(s)	39, 696, 1381, 1936, 3013, 3939
BseLI	CCNNNNNNNGG	7 cut(s)	482, 540, 943, 1809, 2767, 3100, 3930
BseMII	CTCAG	8 cut(s)	47, 318, 2171, 2649, 2934, 3327, 3506, 3902
BseNI	ACTGG	6 cut(s)	385, 409, 935, 1350, 3045, 3083
BseRI	GAGGAG	1 cut(s)	3668
BseYI	CCCAGC	3 cut(s)	170, 968, 2727
BsgI	GTGCAG	2 cut(s)	1260, 3747
Bsh1236I	CGCG	1 cut(s)	254
BshFI	GGCC	3 cut(s)	1862, 2447, 2922
BshNI	GGYRCC	2 cut(s)	933, 3609
BshTI	ACCGGT	1 cut(s)	1573
BshVI	ATCGAT	1 cut(s)	752
BsiHKAI	GWGCWC	1 cut(s)	2836
BsiSI	CCGG	3 cut(s)	633, 1574, 3418
BsiWI	CGTACG	1 cut(s)	490
BslFI	GGGAC	2 cut(s)	292, 3556
BslI	CCNNNNNNNGG	7 cut(s)	482, 540, 943, 1809, 2767, 3100, 3930
BsmAI	GTCTC	7 cut(s)	270, 1402, 1433, 1986, 2370, 3418, 3805
BsmBI	CGTCTC	3 cut(s)	1986, 2370, 3418
BsmFI	GGGAC	2 cut(s)	292, 3556
BsmI	GAATGC	3 cut(s)	49, 2111, 2152
BsnI	GGCC	3 cut(s)	1862, 2447, 2922
Bso31I	GGTCTC	1 cut(s)	3805
Bsp1286I	GDGCHC	2 cut(s)	1352, 2836
Bsp1407I	TGTACA	3 cut(s)	67, 1357, 2346
Bsp1720I	GCTNAGC	1 cut(s)	2157
BspACI	CCGC	7 cut(s)	254, 1067, 1401, 2092, 3185, 3228, 3647
BspANI	GGCC	3 cut(s)	1862, 2447, 2922
BspCNI	CTCAG	8 cut(s)	46, 319, 2170, 2650, 2935, 3326, 3507, 3901
BspDI	ATCGAT	1 cut(s)	752
BspFNI	CGCG	1 cut(s)	254
BspHI	TCATGA	1 cut(s)	1495
BspLI	GGNNCC	5 cut(s)	30, 474, 935, 990, 3611
BspMAI	CTGCAG	4 cut(s)	206, 1008, 2620, 3787
BspMI	ACCTGC	1 cut(s)	1024
BspOI	GCTAGC	2 cut(s)	1545, 3827
BspPI	GGATC	8 cut(s)	983, 996, 1509, 2232, 2510, 2729, 2933, 3894
BspT107I	GGYRCC	2 cut(s)	933, 3609
BspTI	CTTAAG	1 cut(s)	3938
BspTNI	GGTCTC	1 cut(s)	3805
BsrFI	RCCGGY	1 cut(s)	1573
BsrGI	TGTACA	3 cut(s)	67, 1357, 2346
BsrI	ACTGG	6 cut(s)	385, 409, 935, 1350, 3045, 3083
BssAI	RCCGGY	1 cut(s)	1573
BssECI	CCNNGG	5 cut(s)	221, 959, 1721, 1926, 3456
BssNI	GRCGYC	2 cut(s)	2194, 3610
BssSI	CACGAG	2 cut(s)	1115, 3909
BssT1I	CCWWGG	3 cut(s)	959, 1721, 1926
Bst2BI	CACGAG	2 cut(s)	1115, 3909
Bst2UI	CCWGG	6 cut(s)	222, 541, 1580, 1591, 2762, 3797
Bst4CI	ACNGT	8 cut(s)	72, 979, 1334, 1800, 1832, 2166, 2253, 3838
Bst6I	CTCTTC	6 cut(s)	154, 1438, 2140, 2587, 3153, 3261
BstACI	GRCGYC	2 cut(s)	2194, 3610
BstAFI	CTTAAG	1 cut(s)	3938
BstAPI	GCANNNNNTGC	2 cut(s)	119, 182
BstAUI	TGTACA	3 cut(s)	67, 1357, 2346
BstBAI	YACGTR	2 cut(s)	490, 494
BstC8I	GCNNGC	5 cut(s)	1543, 2241, 3438, 3640, 3825
BstENI	CCTNNNNNAGG	1 cut(s)	941
BstF5I	GGATG	6 cut(s)	39, 696, 1381, 1936, 3013, 3939
BstFNI	CGCG	1 cut(s)	254
BstH2I	RGCGCY	6 cut(s)	171, 464, 3107, 3206, 3531, 3613
BstHHI	GCGC	6 cut(s)	170, 463, 3106, 3205, 3530, 3612
BstMAI	GTCTC	7 cut(s)	270, 1402, 1433, 1986, 2370, 3418, 3805
BstNI	CCWGG	6 cut(s)	222, 541, 1580, 1591, 2762, 3797
BstPAI	GACNNNNGTC	1 cut(s)	96
BstSCI	CCNGG	6 cut(s)	220, 539, 1578, 1589, 2760, 3795
BstSFI	CTRYAG	8 cut(s)	202, 1004, 1831, 2249, 2429, 2616, 3783, 3816
BstSNI	TACGTA	1 cut(s)	490
BstUI	CGCG	1 cut(s)	254
BstV2I	GAAGAC	3 cut(s)	639, 3899, 3937
BstX2I	RGATCY	7 cut(s)	385, 859, 988, 1294, 2224, 3129, 3899
BstXI	CCANNNNNNTGG	1 cut(s)	2125
BstYI	RGATCY	7 cut(s)	385, 859, 988, 1294, 2224, 3129, 3899
Bsu15I	ATCGAT	1 cut(s)	752
Bsu36I	CCTNAGG	1 cut(s)	2680
BsuI	GTATCC	1 cut(s)	966
BsuRI	GGCC	3 cut(s)	1862, 2447, 2922
BsuTUI	ATCGAT	1 cut(s)	752
BtsCI	GGATG	6 cut(s)	39, 696, 1381, 1936, 3013, 3939
BtsI	GCAGTG	2 cut(s)	1001, 3649
BtsIMutI	CAGTG	7 cut(s)	928, 1001, 1321, 1343, 3321, 3649, 3843
BveI	ACCTGC	1 cut(s)	1024
Cac8I	GCNNGC	5 cut(s)	1543, 2241, 3438, 3640, 3825
CaiI	CAGNNNCTG	1 cut(s)	2767
CciI	TCATGA	1 cut(s)	1495
CfoI	GCGC	6 cut(s)	170, 463, 3106, 3205, 3530, 3612
Cfr10I	RCCGGY	1 cut(s)	1573
Cfr13I	GGNCC	4 cut(s)	1576, 2128, 2446, 2920
ClaI	ATCGAT	1 cut(s)	752
CseI	GACGC	2 cut(s)	1644, 2183
Csp6I	GTAC	8 cut(s)	68, 451, 491, 934, 1358, 1934, 2347, 3089
CspAI	ACCGGT	1 cut(s)	1573
CspCI	CAANNNNNGTGG	4 cut(s)	1113, 1148, 3499, 3534
CviQI	GTAC	8 cut(s)	68, 451, 491, 934, 1358, 1934, 2347, 3089
DinI	GGCGCC	1 cut(s)	3611
DraIII	CACNNNGTG	1 cut(s)	3749
EaeI	YGGCCR	1 cut(s)	1860
Eam1104I	CTCTTC	6 cut(s)	154, 1438, 2140, 2587, 3153, 3261
EarI	CTCTTC	6 cut(s)	154, 1438, 2140, 2587, 3153, 3261
Eco105I	TACGTA	1 cut(s)	490
Eco130I	CCWWGG	3 cut(s)	959, 1721, 1926
Eco24I	GRGCYC	1 cut(s)	1352
Eco31I	GGTCTC	1 cut(s)	3805
Eco47I	GGWCC	2 cut(s)	1576, 2128
Eco47III	AGCGCT	2 cut(s)	169, 3204
Eco57I	CTGAAG	8 cut(s)	78, 125, 498, 636, 1297, 3480, 3549, 3737
Eco81I	CCTNAGG	1 cut(s)	2680
EcoNI	CCTNNNNNAGG	1 cut(s)	941
EcoO109I	RGGNCCY	1 cut(s)	2446
EcoRI	GAATTC	3 cut(s)	847, 1213, 3362
EcoRII	CCWGG	6 cut(s)	220, 539, 1578, 1589, 2760, 3795
EcoT14I	CCWWGG	3 cut(s)	959, 1721, 1926
EcoT22I	ATGCAT	3 cut(s)	2111, 2179, 2796
EcoT38I	GRGCYC	1 cut(s)	1352
EgeI	GGCGCC	1 cut(s)	3611
EheI	GGCGCC	1 cut(s)	3611
ErhI	CCWWGG	3 cut(s)	959, 1721, 1926
Esp3I	CGTCTC	3 cut(s)	1986, 2370, 3418
FalI	AAGNNNNNCTT	6 cut(s)	2345, 2377, 2523, 2555, 3316, 3348
FaqI	GGGAC	2 cut(s)	292, 3556
FauI	CCCGC	2 cut(s)	2085, 3640
FauNDI	CATATG	2 cut(s)	892, 3145
FbaI	TGATCA	2 cut(s)	1513, 3670
FblI	GTMKAC	1 cut(s)	1795
FokI	GGATG	6 cut(s)	26, 703, 1388, 1943, 3020, 3946
FriOI	GRGCYC	1 cut(s)	1352
GlaI	GCGC	6 cut(s)	169, 462, 3105, 3204, 3529, 3611
GsaI	CCCAGC	3 cut(s)	174, 972, 2731
GsuI	CTGGAG	4 cut(s)	402, 562, 2744, 3100
HaeII	RGCGCY	6 cut(s)	171, 464, 3107, 3206, 3531, 3613
HaeIII	GGCC	3 cut(s)	1862, 2447, 2922
HapII	CCGG	3 cut(s)	633, 1574, 3418
HgaI	GACGC	2 cut(s)	1644, 2183
HhaI	GCGC	6 cut(s)	170, 463, 3106, 3205, 3530, 3612
Hin1I	GRCGYC	2 cut(s)	2194, 3610
Hin6I	GCGC	6 cut(s)	168, 461, 3104, 3203, 3528, 3610
HinP1I	GCGC	6 cut(s)	168, 461, 3104, 3203, 3528, 3610
HindIII	AAGCTT	1 cut(s)	14
HpaII	CCGG	3 cut(s)	633, 1574, 3418
Hpy166II	GTNNAC	6 cut(s)	133, 806, 1381, 1796, 2281, 3038
Hpy8I	GTNNAC	6 cut(s)	133, 806, 1381, 1796, 2281, 3038
HpyAV	CCTTC	9 cut(s)	149, 163, 253, 341, 451, 473, 1295, 1980, 2437
HpyCH4III	ACNGT	8 cut(s)	72, 979, 1334, 1800, 1832, 2166, 2253, 3838
HpyCH4IV	ACGT	4 cut(s)	489, 493, 2998, 3880
HpySE526I	ACGT	4 cut(s)	489, 493, 2998, 3880
Hsp92I	GRCGYC	2 cut(s)	2194, 3610
HspAI	GCGC	6 cut(s)	168, 461, 3104, 3203, 3528, 3610
KasI	GGCGCC	1 cut(s)	3609
KpnI	GGTACC	1 cut(s)	937
Ksp22I	TGATCA	2 cut(s)	1513, 3670
LmnI	GCTCC	1 cut(s)	2764
MaeII	ACGT	4 cut(s)	489, 493, 2998, 3880
MfeI	CAATTG	1 cut(s)	44
MflI	RGATCY	7 cut(s)	385, 859, 988, 1294, 2224, 3129, 3899
MhlI	GDGCHC	2 cut(s)	1352, 2836
MlsI	TGGCCA	1 cut(s)	1862
MluNI	TGGCCA	1 cut(s)	1862
Mly113I	GGCGCC	1 cut(s)	3610
MlyI	GAGTC	7 cut(s)	272, 596, 1015, 1073, 2058, 3394, 3767
MmeI	TCCRAC	5 cut(s)	316, 401, 998, 1016, 1353
Mox20I	TGGCCA	1 cut(s)	1862
Mph1103I	ATGCAT	3 cut(s)	2111, 2179, 2796
MroXI	GAANNNNTTC	1 cut(s)	17
MscI	TGGCCA	1 cut(s)	1862
MslI	CAYNNNNRTG	3 cut(s)	905, 1390, 3025
Msp20I	TGGCCA	1 cut(s)	1862
MspA1I	CMGCKG	4 cut(s)	716, 1067, 3185, 3815
MspCI	CTTAAG	1 cut(s)	3938
MspI	CCGG	3 cut(s)	633, 1574, 3418
MspR9I	CCNGG	6 cut(s)	222, 541, 1580, 1591, 2762, 3797
MunI	CAATTG	1 cut(s)	44
Mva1269I	GAATGC	3 cut(s)	49, 2111, 2152
MvaI	CCWGG	6 cut(s)	222, 541, 1580, 1591, 2762, 3797
MvnI	CGCG	1 cut(s)	254
NarI	GGCGCC	1 cut(s)	3610
NdeI	CATATG	2 cut(s)	892, 3145
NheI	GCTAGC	2 cut(s)	1541, 3823
NlaIV	GGNNCC	5 cut(s)	30, 474, 935, 990, 3611
NmeAIII	GCCGAG	1 cut(s)	720
NmuCI	GTSAC	4 cut(s)	322, 1117, 1519, 3074
NsiI	ATGCAT	3 cut(s)	2111, 2179, 2796
OliI	CACNNNNGTG	1 cut(s)	1390
PagI	TCATGA	1 cut(s)	1495
PaqCI	CACCTGC	1 cut(s)	1024
PcsI	WCGNNNNNNNCGW	1 cut(s)	374
PctI	GAATGC	3 cut(s)	49, 2111, 2152
PdmI	GAANNNNTTC	1 cut(s)	17
Pfl23II	CGTACG	1 cut(s)	490
PflFI	GACNNNGTC	1 cut(s)	1024
PflMI	CCANNNNNTGG	2 cut(s)	540, 2767
PfoI	TCCNGGA	2 cut(s)	539, 2760
PinAI	ACCGGT	1 cut(s)	1573
PleI	GAGTC	7 cut(s)	271, 595, 1015, 1073, 2057, 3394, 3766
PluTI	GGCGCC	1 cut(s)	3613
PpsI	GAGTC	7 cut(s)	271, 595, 1015, 1073, 2057, 3394, 3766
Ppu21I	YACGTR	2 cut(s)	490, 494
PshAI	GACNNNNGTC	1 cut(s)	96
PshBI	ATTAAT	1 cut(s)	272
PsiI	TTATAA	1 cut(s)	723
Psp1406I	AACGTT	2 cut(s)	2998, 3880
Psp6I	CCWGG	6 cut(s)	220, 539, 1578, 1589, 2760, 3795
PspFI	CCCAGC	3 cut(s)	170, 968, 2727
PspGI	CCWGG	6 cut(s)	220, 539, 1578, 1589, 2760, 3795
PspLI	CGTACG	1 cut(s)	490
PspN4I	GGNNCC	5 cut(s)	30, 474, 935, 990, 3611
PspPI	GGNCC	4 cut(s)	1576, 2128, 2446, 2920
PsrI	GAACNNNNNNTAC	2 cut(s)	2409, 2441
PstI	CTGCAG	4 cut(s)	206, 1008, 2620, 3787
PstNI	CAGNNNCTG	1 cut(s)	2767
PsuI	RGATCY	7 cut(s)	385, 859, 988, 1294, 2224, 3129, 3899
PsyI	GACNNNGTC	1 cut(s)	1024
PvuII	CAGCTG	2 cut(s)	716, 3815
RsaI	GTAC	8 cut(s)	69, 452, 492, 935, 1359, 1935, 2348, 3090
RsaNI	GTAC	8 cut(s)	68, 451, 491, 934, 1358, 1934, 2347, 3089
RseI	CAYNNNNRTG	3 cut(s)	905, 1390, 3025
Sau96I	GGNCC	4 cut(s)	1576, 2128, 2446, 2920
SchI	GAGTC	7 cut(s)	272, 596, 1015, 1073, 2058, 3394, 3767
ScrFI	CCNGG	6 cut(s)	222, 541, 1580, 1591, 2762, 3797
SduI	GDGCHC	2 cut(s)	1352, 2836
SfcI	CTRYAG	8 cut(s)	202, 1004, 1831, 2249, 2429, 2616, 3783, 3816
SfoI	GGCGCC	1 cut(s)	3611
SinI	GGWCC	2 cut(s)	1576, 2128
SmiMI	CAYNNNNRTG	3 cut(s)	905, 1390, 3025
SmlI	CTYRAG	5 cut(s)	779, 1207, 3206, 3574, 3938
SmoI	CTYRAG	5 cut(s)	779, 1207, 3206, 3574, 3938
SnaBI	TACGTA	1 cut(s)	490
SpeI	ACTAGT	1 cut(s)	2953
SsiI	CCGC	7 cut(s)	254, 1067, 1401, 2092, 3185, 3228, 3647
SspDI	GGCGCC	1 cut(s)	3609
SspI	AATATT	2 cut(s)	2020, 3395
StyD4I	CCNGG	6 cut(s)	220, 539, 1578, 1589, 2760, 3795
StyI	CCWWGG	3 cut(s)	959, 1721, 1926
TaaI	ACNGT	8 cut(s)	72, 979, 1334, 1800, 1832, 2166, 2253, 3838
TaiI	ACGT	4 cut(s)	492, 496, 3001, 3883
TaqII	GACCGA	1 cut(s)	3710
TatI	WGTACW	4 cut(s)	67, 1357, 1933, 2346
TscAI	CASTG	7 cut(s)	935, 1008, 1321, 1350, 3321, 3649, 3843
TseFI	GTSAC	4 cut(s)	322, 1117, 1519, 3074
Tsp45I	GTSAC	4 cut(s)	322, 1117, 1519, 3074
TspGWI	ACGGA	2 cut(s)	836, 3623
TspRI	CASTG	7 cut(s)	935, 1008, 1321, 1350, 3321, 3649, 3843
Tth111I	GACNNNGTC	1 cut(s)	1024
Van91I	CCANNNNNTGG	2 cut(s)	540, 2767
Vha464I	CTTAAG	1 cut(s)	3938
VpaK11BI	GGWCC	2 cut(s)	1576, 2128
VspI	ATTAAT	1 cut(s)	272
XagI	CCTNNNNNAGG	1 cut(s)	941
XapI	RAATTY	9 cut(s)	7, 665, 847, 1213, 1323, 2303, 2744, 3362, 3790
XbaI	TCTAGA	1 cut(s)	2962
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3620
XmiI	GTMKAC	1 cut(s)	1795
XmnI	GAANNNNTTC	1 cut(s)	17
Zsp2I	ATGCAT	3 cut(s)	2111, 2179, 2796

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.