pycom01g15030

Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
OG0005246
Physical Location & Seq
Reverse (-)
15053867 .. 15055991
2125 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g15030.1

Sequence Viewer

Length: 1746 bp
ATGAATAATCTGAAGCTTTACTCGGAGGTCTCTCTGAATCTCCACTTAAAATCCAAGGAGGAGCTCATACTCTTCTCCGCATTCGACATCGAGCAGAATCGCTTGTTCTTCGCTTCCTCCCACAATAACATTTACGCCACTCACCTCTCGTCCATCCAGAATGAAAGGGCGTGGAGCAAAACCTCGATATCGGCGCAAGTTAATCAAATCGAATTGGATCCCAAGGACTTCATCACTTCATTTAGTTACCTCATGGAGAAAGAGGCGCTTTTGGTGGGAACTGGCAACGGGCTTCTGCTGCTGCATTCTGTGGATGATAATGCTACCCAAGTCGTCGGTGGTGTGGATGGTGGTGTCAAGTGCATCGCCCCCAGTCCGGATGGTGACCTCCTTGCCATAACTACTGGGTCTGGGCAGGTGCTGGTGATGACTCAGGATTGGGATTTGTTGTACGAGACCGCGCTTGAGGACCTACCGGAAGATGGCAACCACGTATGTGAACAGCAATTATCTTCTAAGTTCACATTTGAAAGGCCTATTTCTTGGCGAGGTGATGGGAAGTACTTTGTCACCCTAAGTGAGGTGCAGGATTCAGCATCCATGCTTAAGAGGCTTAAAATTTGGGAGCGACATTCGGGAGCAGTACATGCTGTTTCTGAATCAAAGTCGTTCATGGGATCAGTTGTGGACTGGATGCCCAGTGGAGCAAAAATTGCAGCTGTTTATGATAGGAAATTGGAAAATGAGTGCCCCTCAATAGTTTTCTTTGAGAGGAATGGGTTAGAAAGAAACTTGTTTAGCATCAATGAGCAAACAAATGCATCCATAGAATTTCTCAAGTGGAATTGCAGCTCAGATCTGCTTGCTGCCGTTGTCCGATGTGAAAACTATGACTGCGTCAAGGTTTGGTATTTCAGTAACAACCATTGGTACTTGAAATCTGAAATTAGATACCCAAGACAGGATGGAGTGAGGTTTGTCTGGAATCCAACAAAGTCACTGCAGTTGTTATGTTGGACTCTTGGCGGCCAGATTACATCGTACGACTTCATATGGAATTCAGCTGTGATGGATGACTCTACTGCACTAGTAATTGATGACTCCAAGATACTTGTAACGCCTCTTTCTTTATACGTAATGCCACCTCCAATGTACTTATTCAGCCTTAAATTCCTGAGTGCTGTCCGGGACTTTGCTTTCTATTCCAAGAATTCTAAGAACTGTTTGGCTGCTTTTCTGTCAGATGGTTCTTTATGTGTCGTTGAGCTTCCTGCCACTGATACTTGGGAAGAATTAGAAGGCAAAGAATTTTCCGCTGAGGCATCGAATCACCATTTGGAAGTTGAGCTTGAATGTTCTGAGAATCATGTCCCTGGTTTAGTGACATGCTCAGGCTGGCATGCAAAAGTTGCTGGCCAAAACTCTCTAGAAGAGATGATTATTTCAATTGCTCCTAATCCTGCTAGAAAAGGTTCGGCATTTGTCCAATTTGATGGTGGAAAGGTTTGCGAGTACGTCCCAAAGTTTGGTATTCCTAGGGGAGTTCCAAAACATGATTGGAGTTTCTCATCAACTTGCCCTTCTATGAGTGTGGTTCTAGTTGGAAACAGTGGGTCATTGGAACCTTTAATTTTTGGACTTGATGAGAGCTGTAGGCTGCACGTCAATGGGAAGATAATATGCAACAACTGCGGCAGTTTCTCTTTGTACTCAAATTTGGATGACCAAGTGATGATCCACATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IKI3

Protein Analysis

582

Amino Acids

64.84

Weight (kDa)

5.02

Isoelectric Point (pI)

34.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_ELP1_1st PF04762 1 - 157 1.6e-29 ELP1 first N-terminal beta-propeller
Beta-prop_ELP1_1st PF04762 165 - 330 3.8e-46 ELP1 first N-terminal beta-propeller
Beta-prop_ELP1_2nd PF23797 364 - 449 5.1e-18 ELP1 N-terminal second beta-propeller
Beta-prop_ELP1_2nd PF23797 469 - 571 3.3e-11 ELP1 N-terminal second beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 406
Acc36I ACCTGC 1 cut(s) 406
AccB7I CCANNNNNTGG 1 cut(s) 1526
AccII CGCG 1 cut(s) 461
AccIII TCCGGA 1 cut(s) 376
AciI CCGC 5 cut(s) 78, 459, 1026, 1314, 1692
AclWI GGATC 4 cut(s) 212, 225, 685, 1729
AcoI YGGCCR 2 cut(s) 1027, 1414
AcsI RAATTY 7 cut(s) 618, 830, 1057, 1169, 1210, 1307, 1714
AcuI CTGAAG 1 cut(s) 32
AfaI GTAC 8 cut(s) 452, 563, 645, 932, 1043, 1154, 1514, 1709
AfiI CCNNNNNNNGG 5 cut(s) 376, 482, 580, 961, 1526
AflII CTTAAG 1 cut(s) 605
AgsI TTSAA 4 cut(s) 530, 937, 1352, 1446
AhlI ACTAGT 1 cut(s) 1087
AjiI CACGTC 1 cut(s) 1663
AjnI CCWGG 1 cut(s) 1372
AjuI GAANNNNNNNTTGG 2 cut(s) 1319, 1351
AleI CACNNNNGTG 1 cut(s) 495
AluBI AGCT 8 cut(s) 16, 64, 719, 852, 1064, 1267, 1348, 1650
AluI AGCT 8 cut(s) 16, 64, 719, 852, 1064, 1267, 1348, 1650
Alw21I GWGCWC 1 cut(s) 66
Alw26I GTCTC 2 cut(s) 34, 449
AlwI GGATC 4 cut(s) 212, 225, 685, 1729
AlwNI CAGNNNCTG 1 cut(s) 421
Aor13HI TCCGGA 1 cut(s) 376
AoxI GGCC 3 cut(s) 533, 1027, 1414
ApeKI GCWGC 7 cut(s) 298, 301, 716, 849, 866, 1229, 1657
ApoI RAATTY 7 cut(s) 618, 830, 1057, 1169, 1210, 1307, 1714
Asp700I GAANNNNTTC 1 cut(s) 1471
AspA2I CCTAGG 1 cut(s) 1535
AspLEI GCGC 3 cut(s) 196, 268, 463
AspS9I GGNCC 1 cut(s) 469
AsuC2I CCSGG 1 cut(s) 1187
AsuHPI GGTGA 6 cut(s) 134, 395, 436, 562, 563, 1322
AvaII GGWCC 1 cut(s) 469
AvrII CCTAGG 1 cut(s) 1535
BaeGI GKGCMC 1 cut(s) 752
BalI TGGCCA 1 cut(s) 1416
BamHI GGATCC 1 cut(s) 217
BanII GRGCYC 1 cut(s) 66
Bbv12I GWGCWC 1 cut(s) 66
BbvCI CCTCAGC 1 cut(s) 1317
BbvI GCAGC 7 cut(s) 285, 288, 728, 853, 861, 1216, 1644
BccI CCATC 9 cut(s) 161, 341, 374, 476, 548, 959, 1063, 1238, 1487
BceAI ACGGC 1 cut(s) 854
BciT130I CCWGG 1 cut(s) 1374
BcnI CCSGG 1 cut(s) 1187
BcoDI GTCTC 2 cut(s) 34, 449
BcuI ACTAGT 1 cut(s) 1087
BfaI CTAG 5 cut(s) 1088, 1427, 1464, 1536, 1598
BfmI CTRYAG 2 cut(s) 1001, 1651
BfoI RGCGCY 1 cut(s) 269
BfrI CTTAAG 1 cut(s) 605
BfuAI ACCTGC 1 cut(s) 406
BglII AGATCT 1 cut(s) 856
BisI GCNGC 9 cut(s) 299, 302, 717, 850, 867, 1027, 1230, 1658, 1693
BlnI CCTAGG 1 cut(s) 1535
BlsI GCNGC 9 cut(s) 300, 303, 718, 851, 868, 1028, 1231, 1659, 1694
BmcAI AGTACT 1 cut(s) 563
Bme1390I CCNGG 2 cut(s) 1187, 1374
Bme18I GGWCC 1 cut(s) 469
BmgBI CACGTC 1 cut(s) 1663
BmgT120I GGNCC 1 cut(s) 469
BmiI GGNNCC 2 cut(s) 219, 1623
BmrFI CCNGG 2 cut(s) 1187, 1374
BmrI ACTGGG 3 cut(s) 366, 414, 693
BmsI GCATC 6 cut(s) 372, 605, 684, 810, 830, 1331
BmuI ACTGGG 3 cut(s) 366, 414, 693
BplI GAGNNNNNCTC 2 cut(s) 737, 769
Bpu10I CCTNAGC 2 cut(s) 1317, 1390
BpuEI CTTGAG 2 cut(s) 485, 821
BpuMI CCSGG 1 cut(s) 1187
BsaAI YACGTR 2 cut(s) 493, 1135
BsaI GGTCTC 2 cut(s) 34, 449
BsaJI CCNNGG 4 cut(s) 54, 222, 1372, 1535
BsaWI WCCGGW 2 cut(s) 376, 475
Bsc4I CCNNNNNNNGG 5 cut(s) 376, 482, 580, 961, 1526
Bse1I ACTGG 5 cut(s) 286, 372, 409, 695, 699
BseAI TCCGGA 1 cut(s) 376
BseBI CCWGG 1 cut(s) 1374
BseDI CCNNGG 4 cut(s) 54, 222, 1372, 1535
BseLI CCNNNNNNNGG 5 cut(s) 376, 482, 580, 961, 1526
BseMII CTCAG 6 cut(s) 446, 867, 1166, 1308, 1350, 1404
BseNI ACTGG 5 cut(s) 286, 372, 409, 695, 699
BseRI GAGGAG 1 cut(s) 74
BseSI GKGCMC 1 cut(s) 752
BseXI GCAGC 7 cut(s) 285, 288, 728, 853, 861, 1216, 1644
BsgI GTGCAG 3 cut(s) 605, 1068, 1643
Bsh1236I CGCG 1 cut(s) 461
BshFI GGCC 3 cut(s) 535, 1029, 1416
BsiHKAI GWGCWC 1 cut(s) 66
BsiSI CCGG 3 cut(s) 377, 476, 1186
BsiWI CGTACG 1 cut(s) 1041
BslFI GGGAC 3 cut(s) 1202, 1355, 1502
BslI CCNNNNNNNGG 5 cut(s) 376, 482, 580, 961, 1526
BsmAI GTCTC 2 cut(s) 34, 449
BsmFI GGGAC 3 cut(s) 1202, 1355, 1502
BsmI GAATGC 2 cut(s) 80, 304
BsnI GGCC 3 cut(s) 535, 1029, 1416
Bso31I GGTCTC 2 cut(s) 34, 449
Bsp1286I GDGCHC 2 cut(s) 66, 752
Bsp13I TCCGGA 1 cut(s) 376
Bsp143I GATC 4 cut(s) 217, 677, 856, 1734
BspACI CCGC 5 cut(s) 78, 459, 1026, 1314, 1692
BspANI GGCC 3 cut(s) 535, 1029, 1416
BspCNI CTCAG 6 cut(s) 445, 866, 1167, 1309, 1351, 1403
BspEI TCCGGA 1 cut(s) 376
BspFNI CGCG 1 cut(s) 461
BspLI GGNNCC 2 cut(s) 219, 1623
BspMAI CTGCAG 1 cut(s) 1005
BspMI ACCTGC 1 cut(s) 406
BspPI GGATC 4 cut(s) 212, 225, 685, 1729
BspTI CTTAAG 1 cut(s) 605
BspTNI GGTCTC 2 cut(s) 34, 449
BsrI ACTGG 5 cut(s) 286, 372, 409, 695, 699
BssECI CCNNGG 4 cut(s) 54, 222, 1372, 1535
BssMI GATC 4 cut(s) 217, 677, 856, 1734
BssT1I CCWWGG 3 cut(s) 54, 222, 1535
Bst2UI CCWGG 1 cut(s) 1374
Bst4CI ACNGT 2 cut(s) 1223, 1610
Bst6I CTCTTC 2 cut(s) 77, 1425
BstAFI CTTAAG 1 cut(s) 605
BstAPI GCANNNNNTGC 4 cut(s) 647, 713, 1409, 1689
BstBAI YACGTR 2 cut(s) 493, 1135
BstC8I GCNNGC 4 cut(s) 864, 1397, 1401, 1414
BstDEI CTNAG 9 cut(s) 432, 516, 575, 853, 1175, 1215, 1317, 1359, 1390
BstEII GGTNACC 1 cut(s) 383
BstENI CCTNNNNNAGG 1 cut(s) 578
BstFNI CGCG 1 cut(s) 461
BstH2I RGCGCY 1 cut(s) 269
BstHHI GCGC 3 cut(s) 196, 268, 463
BstKTI GATC 4 cut(s) 220, 680, 859, 1737
BstMAI GTCTC 2 cut(s) 34, 449
BstMBI GATC 4 cut(s) 217, 677, 856, 1734
BstMWI GCNNNNNNNGC 6 cut(s) 298, 610, 647, 713, 1409, 1689
BstNI CCWGG 1 cut(s) 1374
BstNSI RCATGY 3 cut(s) 650, 1389, 1403
BstPI GGTNACC 1 cut(s) 383
BstSCI CCNGG 2 cut(s) 1185, 1372
BstSFI CTRYAG 2 cut(s) 1001, 1651
BstSLI GKGCMC 1 cut(s) 752
BstSNI TACGTA 1 cut(s) 1135
BstUI CGCG 1 cut(s) 461
BstV1I GCAGC 7 cut(s) 285, 288, 728, 853, 861, 1216, 1644
BstX2I RGATCY 2 cut(s) 217, 856
BstXI CCANNNNNNTGG 1 cut(s) 1493
BstYI RGATCY 2 cut(s) 217, 856
BsuRI GGCC 3 cut(s) 535, 1029, 1416
BtgZI GCGATG 1 cut(s) 349
BtrI CACGTC 1 cut(s) 1663
BtsI GCAGTG 1 cut(s) 998
BtsIMutI CAGTG 4 cut(s) 706, 998, 1275, 1615
BveI ACCTGC 1 cut(s) 406
Cac8I GCNNGC 4 cut(s) 864, 1397, 1401, 1414
CaiI CAGNNNCTG 1 cut(s) 421
CfoI GCGC 3 cut(s) 196, 268, 463
Cfr13I GGNCC 1 cut(s) 469
CseI GACGC 1 cut(s) 886
Csp6I GTAC 8 cut(s) 451, 562, 644, 931, 1042, 1153, 1513, 1708
CviAII CATG 8 cut(s) 253, 601, 647, 673, 1367, 1386, 1400, 1553
CviQI GTAC 8 cut(s) 451, 562, 644, 931, 1042, 1153, 1513, 1708
DdeI CTNAG 9 cut(s) 432, 516, 575, 853, 1175, 1215, 1317, 1359, 1390
DpnI GATC 4 cut(s) 219, 679, 858, 1736
DpnII GATC 4 cut(s) 217, 677, 856, 1734
EaeI YGGCCR 2 cut(s) 1027, 1414
Eam1104I CTCTTC 2 cut(s) 77, 1425
EarI CTCTTC 2 cut(s) 77, 1425
Ecl136II GAGCTC 1 cut(s) 64
Eco105I TACGTA 1 cut(s) 1135
Eco130I CCWWGG 3 cut(s) 54, 222, 1535
Eco147I AGGCCT 1 cut(s) 535
Eco24I GRGCYC 1 cut(s) 66
Eco31I GGTCTC 2 cut(s) 34, 449
Eco32I GATATC 1 cut(s) 189
Eco47I GGWCC 1 cut(s) 469
Eco53kI GAGCTC 1 cut(s) 64
Eco57I CTGAAG 1 cut(s) 32
Eco91I GGTNACC 1 cut(s) 383
EcoICRI GAGCTC 1 cut(s) 64
EcoNI CCTNNNNNAGG 1 cut(s) 578
EcoO109I RGGNCCY 1 cut(s) 469
EcoO65I GGTNACC 1 cut(s) 383
EcoRI GAATTC 2 cut(s) 1057, 1210
EcoRII CCWGG 1 cut(s) 1372
EcoRV GATATC 1 cut(s) 189
EcoT14I CCWWGG 3 cut(s) 54, 222, 1535
EcoT22I ATGCAT 1 cut(s) 823
EcoT38I GRGCYC 1 cut(s) 66
ErhI CCWWGG 3 cut(s) 54, 222, 1535
FaeI CATG 8 cut(s) 256, 604, 650, 676, 1370, 1389, 1403, 1556
FalI AAGNNNNNCTT 4 cut(s) 252, 284, 1332, 1364
FaqI GGGAC 3 cut(s) 1202, 1355, 1502
FatI CATG 8 cut(s) 252, 600, 646, 672, 1366, 1385, 1399, 1552
FauNDI CATATG 1 cut(s) 1052
Fnu4HI GCNGC 9 cut(s) 299, 302, 717, 850, 867, 1027, 1230, 1658, 1693
FriOI GRGCYC 1 cut(s) 66
Fsp4HI GCNGC 9 cut(s) 299, 302, 717, 850, 867, 1027, 1230, 1658, 1693
FspBI CTAG 5 cut(s) 1088, 1427, 1464, 1536, 1598
GlaI GCGC 3 cut(s) 195, 267, 462
GluI GCNGC 9 cut(s) 299, 302, 717, 850, 867, 1027, 1230, 1658, 1693
HaeII RGCGCY 1 cut(s) 269
HaeIII GGCC 3 cut(s) 535, 1029, 1416
HapII CCGG 3 cut(s) 377, 476, 1186
HgaI GACGC 1 cut(s) 886
HhaI GCGC 3 cut(s) 196, 268, 463
Hin1II CATG 8 cut(s) 256, 604, 650, 676, 1370, 1389, 1403, 1556
Hin6I GCGC 3 cut(s) 194, 266, 461
HinP1I GCGC 3 cut(s) 194, 266, 461
HindIII AAGCTT 1 cut(s) 14
HpaII CCGG 3 cut(s) 377, 476, 1186
HphI GGTGA 6 cut(s) 134, 395, 436, 562, 563, 1322
Hpy166II GTNNAC 3 cut(s) 500, 522, 688
Hpy188I TCNGA 9 cut(s) 12, 25, 36, 658, 856, 878, 943, 1243, 1360
Hpy188III TCNNGA 7 cut(s) 157, 377, 434, 636, 982, 1174, 1427
Hpy8I GTNNAC 3 cut(s) 500, 522, 688
Hpy99I CGWCG 1 cut(s) 338
HpyAV CCTTC 2 cut(s) 1292, 1590
HpyCH4III ACNGT 2 cut(s) 1223, 1610
HpyCH4IV ACGT 4 cut(s) 492, 1134, 1515, 1662
HpyF10VI GCNNNNNNNGC 6 cut(s) 298, 610, 647, 713, 1409, 1689
HpyF3I CTNAG 9 cut(s) 432, 516, 575, 853, 1175, 1215, 1317, 1359, 1390
HpySE526I ACGT 4 cut(s) 492, 1134, 1515, 1662
Hsp92II CATG 8 cut(s) 256, 604, 650, 676, 1370, 1389, 1403, 1556
HspAI GCGC 3 cut(s) 194, 266, 461
Kpn2I TCCGGA 1 cut(s) 376
Kzo9I GATC 4 cut(s) 217, 677, 856, 1734
LmnI GCTCC 6 cut(s) 61, 174, 625, 638, 704, 1456
Lsp1109I GCAGC 7 cut(s) 285, 288, 728, 853, 861, 1216, 1644
LweI GCATC 6 cut(s) 372, 605, 684, 810, 830, 1331
MaeI CTAG 5 cut(s) 1088, 1427, 1464, 1536, 1598
MaeII ACGT 4 cut(s) 492, 1134, 1515, 1662
MaeIII GTNAC 7 cut(s) 245, 383, 568, 917, 996, 1114, 1381
MalI GATC 4 cut(s) 219, 679, 858, 1736
MboI GATC 4 cut(s) 217, 677, 856, 1734
MboII GAAGA 7 cut(s) 64, 100, 491, 504, 1301, 1442, 1684
MfeI CAATTG 1 cut(s) 1446
MflI RGATCY 2 cut(s) 217, 856
MhlI GDGCHC 2 cut(s) 66, 752
MlsI TGGCCA 1 cut(s) 1416
MluNI TGGCCA 1 cut(s) 1416
MlyI GAGTC 4 cut(s) 424, 1012, 1070, 1094
MmeI TCCRAC 3 cut(s) 995, 1013, 1582
Mox20I TGGCCA 1 cut(s) 1416
Mph1103I ATGCAT 1 cut(s) 823
MroI TCCGGA 1 cut(s) 376
MroXI GAANNNNTTC 1 cut(s) 1471
MscI TGGCCA 1 cut(s) 1416
MseI TTAA 6 cut(s) 47, 201, 606, 615, 1167, 1628
MslI CAYNNNNRTG 2 cut(s) 495, 1665
Msp20I TGGCCA 1 cut(s) 1416
MspA1I CMGCKG 3 cut(s) 719, 1064, 1316
MspCI CTTAAG 1 cut(s) 605
MspI CCGG 3 cut(s) 377, 476, 1186
MspR9I CCNGG 2 cut(s) 1187, 1374
MunI CAATTG 1 cut(s) 1446
Mva1269I GAATGC 2 cut(s) 80, 304
MvaI CCWGG 1 cut(s) 1374
MvnI CGCG 1 cut(s) 461
MwoI GCNNNNNNNGC 6 cut(s) 298, 610, 647, 713, 1409, 1689
NciI CCSGG 1 cut(s) 1187
NdeI CATATG 1 cut(s) 1052
NdeII GATC 4 cut(s) 217, 677, 856, 1734
NlaIII CATG 8 cut(s) 256, 604, 650, 676, 1370, 1389, 1403, 1556
NlaIV GGNNCC 2 cut(s) 219, 1623
NmuCI GTSAC 4 cut(s) 383, 568, 996, 1381
NsiI ATGCAT 1 cut(s) 823
NspI RCATGY 3 cut(s) 650, 1389, 1403
OliI CACNNNNGTG 1 cut(s) 495
PaeI GCATGC 1 cut(s) 1403
PaqCI CACCTGC 1 cut(s) 406
PceI AGGCCT 1 cut(s) 535
PctI GAATGC 2 cut(s) 80, 304
PdmI GAANNNNTTC 1 cut(s) 1471
PfeI GAWTC 7 cut(s) 37, 97, 590, 659, 985, 1327, 1363
Pfl23II CGTACG 1 cut(s) 1041
PflFI GACNNNGTC 1 cut(s) 896
PflMI CCANNNNNTGG 1 cut(s) 1526
PfoI TCCNGGA 1 cut(s) 1185
PkrI GCNGC 9 cut(s) 300, 303, 718, 851, 868, 1028, 1231, 1659, 1694
PleI GAGTC 4 cut(s) 424, 1012, 1070, 1094
PpsI GAGTC 4 cut(s) 424, 1012, 1070, 1094
Ppu21I YACGTR 2 cut(s) 493, 1135
PpuMI RGGWCCY 1 cut(s) 469
Psp124BI GAGCTC 1 cut(s) 66
Psp5II RGGWCCY 1 cut(s) 469
Psp6I CCWGG 1 cut(s) 1372
PspEI GGTNACC 1 cut(s) 383
PspGI CCWGG 1 cut(s) 1372
PspLI CGTACG 1 cut(s) 1041
PspN4I GGNNCC 2 cut(s) 219, 1623
PspPI GGNCC 1 cut(s) 469
PspPPI RGGWCCY 1 cut(s) 469
PstI CTGCAG 1 cut(s) 1005
PstNI CAGNNNCTG 1 cut(s) 421
PsuI RGATCY 2 cut(s) 217, 856
PsyI GACNNNGTC 1 cut(s) 896
PvuII CAGCTG 2 cut(s) 719, 1064
RsaI GTAC 8 cut(s) 452, 563, 645, 932, 1043, 1154, 1514, 1709
RsaNI GTAC 8 cut(s) 451, 562, 644, 931, 1042, 1153, 1513, 1708
RseI CAYNNNNRTG 2 cut(s) 495, 1665
SacI GAGCTC 1 cut(s) 66
SaqAI TTAA 6 cut(s) 47, 201, 606, 615, 1167, 1628
SatI GCNGC 9 cut(s) 299, 302, 717, 850, 867, 1027, 1230, 1658, 1693
Sau3AI GATC 4 cut(s) 217, 677, 856, 1734
Sau96I GGNCC 1 cut(s) 469
ScaI AGTACT 1 cut(s) 563
SchI GAGTC 4 cut(s) 424, 1012, 1070, 1094
ScrFI CCNGG 2 cut(s) 1187, 1374
SduI GDGCHC 2 cut(s) 66, 752
SfaNI GCATC 6 cut(s) 372, 605, 684, 810, 830, 1331
SfcI CTRYAG 2 cut(s) 1001, 1651
SinI GGWCC 1 cut(s) 469
SmiMI CAYNNNNRTG 2 cut(s) 495, 1665
SmlI CTYRAG 3 cut(s) 464, 605, 836
SmoI CTYRAG 3 cut(s) 464, 605, 836
SnaBI TACGTA 1 cut(s) 1135
SpeI ACTAGT 1 cut(s) 1087
SphI GCATGC 1 cut(s) 1403
SseBI AGGCCT 1 cut(s) 535
SsiI CCGC 5 cut(s) 78, 459, 1026, 1314, 1692
SspMI CTAG 5 cut(s) 1088, 1427, 1464, 1536, 1598
SstI GAGCTC 1 cut(s) 66
StuI AGGCCT 1 cut(s) 535
StyD4I CCNGG 2 cut(s) 1185, 1372
StyI CCWWGG 3 cut(s) 54, 222, 1535
TaaI ACNGT 2 cut(s) 1223, 1610
TaiI ACGT 4 cut(s) 495, 1137, 1518, 1665
TaqI TCGA 5 cut(s) 84, 90, 185, 210, 1325
TatI WGTACW 4 cut(s) 561, 643, 1152, 1707
TauI GCSGC 2 cut(s) 1029, 1695
TfiI GAWTC 7 cut(s) 37, 97, 590, 659, 985, 1327, 1363
Tru1I TTAA 6 cut(s) 47, 201, 606, 615, 1167, 1628
Tru9I TTAA 6 cut(s) 47, 201, 606, 615, 1167, 1628
TscAI CASTG 4 cut(s) 706, 1005, 1282, 1615
TseFI GTSAC 4 cut(s) 383, 568, 996, 1381
TseI GCWGC 7 cut(s) 298, 301, 716, 849, 866, 1229, 1657
Tsp45I GTSAC 4 cut(s) 383, 568, 996, 1381
TspDTI ATGAA 6 cut(s) 17, 177, 220, 228, 661, 1039
TspRI CASTG 4 cut(s) 706, 1005, 1282, 1615
Tth111I GACNNNGTC 1 cut(s) 896
Van91I CCANNNNNTGG 1 cut(s) 1526
Vha464I CTTAAG 1 cut(s) 605
VpaK11BI GGWCC 1 cut(s) 469
XagI CCTNNNNNAGG 1 cut(s) 578
XapI RAATTY 7 cut(s) 618, 830, 1057, 1169, 1210, 1307, 1714
XbaI TCTAGA 1 cut(s) 1426
XceI RCATGY 3 cut(s) 650, 1389, 1403
XcmI CCANNNNNNNNNTGG 3 cut(s) 335, 1493, 1554
XmaJI CCTAGG 1 cut(s) 1535
XmnI GAANNNNTTC 1 cut(s) 1471
XspI CTAG 5 cut(s) 1088, 1427, 1464, 1536, 1598
ZrmI AGTACT 1 cut(s) 563
Zsp2I ATGCAT 1 cut(s) 823
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.