FvH4_7g21920

Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0005246
Physical Location & Seq
Reverse (-)
17413614 .. 17418634
5021 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g21920.t1

Sequence Viewer

Length: 3969 bp
ATGAACAATCTCAAGCTCTACTCGGAGGCCTCTCTGAACCTCCAGCTACACTCCCCACAAGGAGAAGAGCTCATCCTCTTCTCCGCCTTCGACATCGAGCAGAGCCGCCTCTTCTTCGCCTCCTCCGCCAACAACATCTACTCCACCCACCTCTCCTCCCTCCAGCATGAGAGGGCGTGGAGCAAGACCTCGATCGCCGCGCAGGTCAGTCGGATCGAGCTGGATGAGGCGGAGGACTTCATCACTTCGTTTGTGTACCTCATGGAGAAAGAGGCGCTCTTGGTTGGGACCAGTAAGGGGCTGCTGCTGCTGCATAGTGTGGATGAGAATGGCTCGCAGGTCGTCGGAGGCGTCGACGGCGGCGTGAGGTGTGTTTCGGCGAGTCCGGATGGTGATCTTGTGGCGATAATCACCGGGAGTGGGCAGATACTTGTGATGACTCTCGATTGGGATTTGCTTTACGAGACTGCACTTGAGGATGTTGCCGAAGACGGCAGCACCGTATGTGATCCGGTATTGTCTAATATTGAAAGCCCCATTGCTTGGCGCGGTGACGGGAAGTACTTTGTTACGCTGAGTGAGGCGTTGGATTCTAGCTCCTCTTTGCTTAAGAGGCTTAAAGTTTGGGAGCGGAATTCAGGGGAGTTACATGCTGTTTCTGAATCAAAGCAGTTTATGGGATCAGTGGTGGACTGGATGCCAAGTGGAGCGAAAGTTGCTGCTGTTTATGATAGGAAAGCGCAGAATGAGTGTCCTGCGATAGTATTCTATGAGAGGAATGGGTTGGAAAGAAGCATGTTTAGCATTAATGAGCAAGTTAATGCAACTGTAGAATTTCTCAAGTGGAATTGTAGTTCAGATCTGCTTGCGGCCATTGTCAGATGTGATAACTATGACTGTGTCAAGATTTGGTATTTCAGTAACAACCATTGGTACTTAAAGTCTGAATTTAGATACCCAAGACACGATGGAGTGAGGTTTGTCTGGAATCCGACAAGGCCACTGCAGTTAATATGTTGGACTCTTGGTGGCCAGATCACATCTTACAACTTCATATGGAATTCAGCTGTGATGGACGACTCAACTGCATTAGTAATTGATGACTCCAAGATACTTGTAACCCCACTTTCTTTATGCCTAATGCCACCTCCTATGTATTTATTCAGCCTTAAATTCATGAGTGTTGTCCGGGACTTTGCCTTCTATTCCAAGAATTCTAAGAACTGCTTGGCTGCTTTTCTGTCAGATGGCTGTTTATGCGTTGTAGAGCTTCCCGCAACTGATACTTGGGAAGATCTAGAAGGCAAAGAGTTTCCTGTTGAAGCGTCCAGTTCTGATTCACCATTCGGCTCCGTTTTACATCTTATATGGTTGGACCCCCACAAGATTCTTGCTGTTTCTCACCATGGGTTCAGCCATAGTAATTACTTGTCTCAGTCTTCACTTGGTGAGGAAGACCTTGGTTTTTATTTGCAGGAAATTGAGCTTTCATGCTCCGAGGATCATGTACCAGGTTTATTGACATGCTCAGGATTTAATGCTAAAGTTTCCAGTCGAAACTCTCTAGAAGAGACCATTACTGGAATTGCTCCTAATCCTGCTTCAAAAGGTTCAGCATTTGTTCAATTTGATGGTGGAAAGGTTTATGAGTATGTTCCAAAGTTAGGCATCTCCAGAGGGGCCTCAAAACATGATTGGAGCTTCTCATCGACTTGCCCTTGGATGAGTGTGGTTCTAGTTGGGGACAGTGTGTCATCGAAACCTCTGCTTTTTGGACTTGATGACAGTTGTAGGCTGCACGTCAGTAGGAAGATAATATGCAATAACTGCAGCAGTTTTTCATTCTACTCAAATTTGGCTGATCAGGTGATCACACATTTAATTTTGGCAACTAAGCAGGATTTGCTTTTTGTTGTTGAAATATCAGATGTATTGCAAAAAGAACTTGAGATTAAACATGAAAACTTCATCCATGCTGGTAAGAAGAAAAGAGAAGAAAATAGGAACTTTATAAACATGTGGGAAAGAGGTGCCAAAGTTGTTGGTGTCGTTCATGGAGATGAAGCTGCTGTCCTGTTGCAGCCATCTCGTGGCAATCTAGAATGCATTTACCCAAGAAAGTTGGTCCTGGCCTCTATTTGCAATGCATTGGTTCAAAGGCGTTTTAGAGATGCACTTCTCATGGTGAGGCGTCAGAGGATAGATTTCAATGTTCTTGTTGACTATTGTGGTTGGCAGGTGTTTCTTCAATCAGCTGCAGAGTTTGTCAAGCAGGTCAATAATTTGAACCACATGACTGAGTTTGTTTGTGCCATAAAGAATGAAGATACTACAGAGACACTATATAAGGAATTTATTTCTTTACCCTCTCCTAAAGAAGCTAAAGATGTGCAATCACATGATTCCAAGGGTTCTGATTCCAATAACAAGGTATCTTCTGTGCTTCTGGCCATTAGGAAGGCTCTTGAGGATCAATTACCAGAAACTCCTGCAAGGGAGCTTTGCATTCTGACCACTCTCGCTCGTAGTGAACCCCCTGCAATTGATGAGGCTTTAGAGAGAATAAAAGCTATCCGTGAGGCAGAATTGTCAGGTTCCAGTGATGAAAGGAGAATGTCTTACCCTTCTGCTGAAGAGGCTTTGAAGCATTTGTTATGGTTATCTGATTCCGAATCTGTTTTTGAGGCAGCTTTAGGCCTTTATGATTTGAACCTTGCAGCTATGGTGGCATTGAATTCTCAGCGGGACCCTAAGGAGTTCCTTCCTTTTCTTCAAGAATTGGAAAAAATGCCCGAAACTTTAATGCGCTATAACATTGACCTTCGGCTGCAGAGGTTTGAGAAGGCCCTTAAGCACATTGTTTCTGCAGGAGACACTTGCTATGCAGATTCTATGAACCTGATGAAGAAAAACCCTCAACTCTTTCCACTGGGACTTCAGCTGATTGCCGATCCTAACAAGAAAATCCAAGTTCTCGATGCTTGGGGAGATCATCTTAGCAATGAAAAATGCTATGAGGATGCTGCTGTCACTTATATGTGCTGCTCCAGTTTTGAAAAGGCTTTGAAATCGTACCGTTCTTGTGGTAATTGGAGTAAGGTGCTTACAGTTGCCGGGATTCTAAAACTGGGTAAAGATGAGATAATGCAACTGGCTCATGAGCTATGTGAAGAATTGCAAGCTCTTGGTAAACCAAAGGAAGCTGCCAAAATTGAGCTGGAGTATTGTGGTGATATTAACAATGGCATGAGTTTGTTGATTAGCGCGAGGGACTGGGAGGAAGCTTTGAGAGTTGCTTTAATGCATAATAGACAGGATTTGATCTCTGAGGTGAAGAATGCAGCCTTGGAATGTGCGGTCGTGCTTATTGGTGAATACGAGGAAGGTTTGGAGAAAGTAGGGAAGTACTTGGCTCGATACTTAGGTTTAAGACAAAGAAGGTTACTTCTTGCTGCAAAACTCCAGTCTGAGGAACGGTCAATGAACGATCTTGATGATGATACTGCTTCAGAAGCTAGCAGTAATTTCAGTGGAATGAGTGCTTACACCACTGGGACCAGGAAGAGCTCTGCCACTTCCATGAGATCAAGTGCAACTAGCAGGGCAAGAGATGCCAGGCGTCAGAGAAAGAAAGGAAAAATCCGTGCTGGCAGTCCTGGTGAGGAGCTCGCTCTTGTAGATCATTTGAAGGGGATGCCTCCAACAACTGAAGCACTGCAGGAGCTAAAATCTTTATTGCATACGCTTGTGATGCTTGGCGAGGTTGAAACTGCAAGAAAGCTGCAGAAGGCTGGAGAGAACTTTCAACTGTCACATATGGCCGCAGTCAAACTAGCTGAAGATACAGTATCCACCGATGGCATAGATGAGCATACACAGACTTTGGAGCATTATACACAGAGTATTAGAAGTGTAGTGCAAAACTCCGAGGCTTTCTTTTGGCGATGTAAAGTATTTCTTTCTCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IKI3

Protein Analysis

1323

Amino Acids

147.72

Weight (kDa)

5.35

Isoelectric Point (pI)

47.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_ELP1_1st PF04762 1 - 160 1.5e-26 ELP1 first N-terminal beta-propeller
Beta-prop_ELP1_1st PF04762 177 - 331 1.1e-43 ELP1 first N-terminal beta-propeller
Beta-prop_ELP1_2nd PF23797 365 - 681 8.7e-49 ELP1 N-terminal second beta-propeller
A-sol_ELP1 PF23925 706 - 927 6e-48 ELP1 alpha-solenoid
TPR_ELP1 PF23878 936 - 1097 1e-24 ELP1 TPR domain
HB_ELP1 PF23936 1109 - 1266 1.1e-15 ELP1 three-helix bundle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2012
AarI CACCTGC 1 cut(s) 2227
Acc36I ACCTGC 4 cut(s) 193, 328, 2227, 2263
AccB1I GGYRCC 1 cut(s) 2030
AccB7I CCANNNNNTGG 2 cut(s) 543, 2090
AccBSI CCGCTC 1 cut(s) 631
AccI GTMKAC 1 cut(s) 354
AccII CGCG 3 cut(s) 200, 549, 3266
AccIII TCCGGA 1 cut(s) 385
AclWI GGATC 6 cut(s) 221, 503, 688, 1509, 2478, 2945
AcoI YGGCCR 4 cut(s) 870, 1030, 2448, 3819
AcsI RAATTY 9 cut(s) 634, 833, 947, 1060, 1172, 1213, 1852, 2351, 2734
AcuI CTGAAG 5 cut(s) 2652, 2921, 3492, 3729, 3858
AcyI GRCGYC 3 cut(s) 351, 2191, 3619
AdeI CACNNNGTG 1 cut(s) 1448
AfaI GTAC 6 cut(s) 257, 563, 935, 1509, 3074, 3407
AfiI CCNNNNNNNGG 6 cut(s) 297, 420, 543, 1664, 2090, 3469
AflII CTTAAG 2 cut(s) 608, 2849
AflIII ACRYGT 1 cut(s) 2016
AhdI GACNNNNNGTC 1 cut(s) 1750
AjiI CACGTC 1 cut(s) 1801
AjnI CCWGG 5 cut(s) 1510, 2127, 3557, 3614, 3655
AjuI GAANNNNNNNTTGG 2 cut(s) 3329, 3361
AloI GAACNNNNNNTCC 2 cut(s) 838, 870
Alw21I GWGCWC 3 cut(s) 72, 3569, 3669
Alw26I GTCTC 5 cut(s) 458, 1437, 1565, 2330, 2865
AlwI GGATC 6 cut(s) 221, 503, 688, 1509, 2478, 2945
Aor13HI TCCGGA 1 cut(s) 385
ApoI RAATTY 9 cut(s) 634, 833, 947, 1060, 1172, 1213, 1852, 2351, 2734
ArsI GACNNNNNNTTYG 2 cut(s) 3449, 3481
AseI ATTAAT 1 cut(s) 807
AspLEI GCGC 6 cut(s) 202, 277, 549, 742, 2808, 3266
AspS9I GGNCC 7 cut(s) 288, 1375, 1680, 2125, 2746, 2845, 3555
AsuC2I CCSGG 3 cut(s) 415, 1190, 3115
AsuNHI GCTAGC 1 cut(s) 3515
AvaII GGWCC 5 cut(s) 288, 1375, 2125, 2746, 3555
AxyI CCTNAGG 1 cut(s) 2751
BaeI ACNNNNGTAYC 2 cut(s) 3409, 3442
BalI TGGCCA 2 cut(s) 1032, 2450
BanI GGYRCC 1 cut(s) 2030
BanII GRGCYC 3 cut(s) 72, 3569, 3669
BauI CACGAG 1 cut(s) 2088
BbsI GAAGAC 3 cut(s) 495, 1431, 1461
Bbv12I GWGCWC 3 cut(s) 72, 3569, 3669
BccI CCATC 7 cut(s) 383, 962, 1066, 1241, 1625, 2092, 3851
BceAI ACGGC 2 cut(s) 373, 508
BcgI CGANNNNNNTGC 8 cut(s) 191, 225, 1067, 1101, 1747, 1781, 2069, 2103
BciT130I CCWGG 5 cut(s) 1512, 2129, 3559, 3616, 3657
BciVI GTATCC 1 cut(s) 3859
BclI TGATCA 2 cut(s) 1861, 1869
BcnI CCSGG 3 cut(s) 415, 1190, 3115
BcoDI GTCTC 5 cut(s) 458, 1437, 1565, 2330, 2865
BfaI CTAG 8 cut(s) 594, 1298, 1565, 1736, 2099, 3516, 3597, 3833
BfmI CTRYAG 9 cut(s) 828, 1004, 1828, 2256, 2331, 2828, 2865, 3716, 3782
BfoI RGCGCY 1 cut(s) 278
BfrI CTTAAG 2 cut(s) 608, 2849
BfuAI ACCTGC 4 cut(s) 193, 328, 2227, 2263
BfuI GTATCC 1 cut(s) 3859
BglII AGATCT 2 cut(s) 859, 1294
BmcAI AGTACT 2 cut(s) 563, 3407
Bme1390I CCNGG 8 cut(s) 415, 1190, 1512, 2129, 3115, 3559, 3616, 3657
Bme18I GGWCC 5 cut(s) 288, 1375, 2125, 2746, 3555
BmeRI GACNNNNNGTC 1 cut(s) 1750
BmgBI CACGTC 1 cut(s) 1801
BmgT120I GGNCC 7 cut(s) 288, 1375, 1680, 2125, 2746, 2845, 3555
BmiI GGNNCC 9 cut(s) 289, 1351, 1377, 1681, 2032, 2596, 2747, 2748, 3556
BmrFI CCNGG 8 cut(s) 415, 1190, 1512, 2129, 3115, 3559, 3616, 3657
BmrI ACTGGG 4 cut(s) 2939, 3137, 3283, 3561
BmsI GCATC 8 cut(s) 687, 1677, 2161, 2968, 3010, 3601, 3684, 3741
BmtI GCTAGC 1 cut(s) 3519
BmuI ACTGGG 4 cut(s) 2939, 3137, 3283, 3561
BpiI GAAGAC 3 cut(s) 495, 1431, 1461
BplI GAGNNNNNCTC 4 cut(s) 54, 86, 317, 349
BpmI CTGGAG 7 cut(s) 26, 146, 1657, 3031, 3239, 3446, 3813
Bpu10I CCTNAGC 1 cut(s) 1528
BpuEI CTTGAG 4 cut(s) 494, 824, 1967, 2486
BpuMI CCSGG 3 cut(s) 415, 1190, 3115
BsaBI GATNNNNATC 1 cut(s) 393
BsaHI GRCGYC 3 cut(s) 351, 2191, 3619
BsaI GGTCTC 1 cut(s) 1565
BsaJI CCNNGG 7 cut(s) 1405, 1459, 1497, 1718, 2406, 3345, 3927
BsaWI WCCGGW 2 cut(s) 385, 511
BsaXI ACNNNNNCTCC 6 cut(s) 125, 140, 155, 170, 699, 729
Bsc4I CCNNNNNNNGG 6 cut(s) 297, 420, 543, 1664, 2090, 3469
Bse21I CCTNAGG 1 cut(s) 2751
Bse3DI GCAATG 3 cut(s) 537, 2149, 3007
Bse8I GATNNNNATC 1 cut(s) 393
BseAI TCCGGA 1 cut(s) 385
BseBI CCWGG 5 cut(s) 1512, 2129, 3559, 3616, 3657
BseDI CCNNGG 7 cut(s) 1405, 1459, 1497, 1718, 2406, 3345, 3927
BseJI GATNNNNATC 1 cut(s) 393
BseLI CCNNNNNNNGG 6 cut(s) 297, 420, 543, 1664, 2090, 3469
BseMI GCAATG 3 cut(s) 537, 2149, 3007
BseMII CTCAG 7 cut(s) 566, 1448, 1542, 2289, 2753, 3318, 3459
BseRI GAGGAG 4 cut(s) 112, 145, 589, 3677
BsgI GTGCAG 2 cut(s) 453, 1781
Bsh1236I CGCG 3 cut(s) 200, 549, 3266
Bsh1285I CGRYCG 2 cut(s) 195, 3360
BshNI GGYRCC 1 cut(s) 2030
BsiEI CGRYCG 2 cut(s) 195, 3360
BsiHKAI GWGCWC 3 cut(s) 72, 3569, 3669
BsiSI CCGG 5 cut(s) 386, 414, 512, 1189, 3114
BslFI GGGAC 7 cut(s) 301, 1205, 1757, 2759, 2946, 3284, 3568
BslI CCNNNNNNNGG 6 cut(s) 297, 420, 543, 1664, 2090, 3469
BsmAI GTCTC 5 cut(s) 458, 1437, 1565, 2330, 2865
BsmFI GGGAC 7 cut(s) 301, 1205, 1757, 2759, 2946, 3284, 3568
BsmI GAATGC 3 cut(s) 2108, 2505, 3343
Bso31I GGTCTC 1 cut(s) 1565
Bsp1286I GDGCHC 3 cut(s) 72, 3569, 3669
Bsp13I TCCGGA 1 cut(s) 385
Bsp19I CCATGG 1 cut(s) 1405
BspCNI CTCAG 7 cut(s) 567, 1447, 1541, 2290, 2752, 3319, 3460
BspEI TCCGGA 1 cut(s) 385
BspFNI CGCG 3 cut(s) 200, 549, 3266
BspHI TCATGA 2 cut(s) 1176, 3157
BspLI GGNNCC 9 cut(s) 289, 1351, 1377, 1681, 2032, 2596, 2747, 2748, 3556
BspMAI CTGCAG 7 cut(s) 1008, 1832, 2260, 2832, 2869, 3720, 3786
BspMI ACCTGC 4 cut(s) 193, 328, 2227, 2263
BspOI GCTAGC 1 cut(s) 3519
BspPI GGATC 6 cut(s) 221, 503, 688, 1509, 2478, 2945
BspQI GCTCTTC 2 cut(s) 60, 3557
BspT107I GGYRCC 1 cut(s) 2030
BspTI CTTAAG 2 cut(s) 608, 2849
BspTNI GGTCTC 1 cut(s) 1565
BsrBI CCGCTC 1 cut(s) 631
BsrDI GCAATG 3 cut(s) 537, 2149, 3007
BssECI CCNNGG 7 cut(s) 1405, 1459, 1497, 1718, 2406, 3345, 3927
BssNI GRCGYC 3 cut(s) 351, 2191, 3619
BssSI CACGAG 1 cut(s) 2088
BssT1I CCWWGG 5 cut(s) 1405, 1459, 1718, 2406, 3345
Bst2BI CACGAG 1 cut(s) 2088
Bst2UI CCWGG 5 cut(s) 1512, 2129, 3559, 3616, 3657
Bst6I CTCTTC 6 cut(s) 60, 83, 116, 1563, 2628, 3557
BstACI GRCGYC 3 cut(s) 351, 2191, 3619
BstAFI CTTAAG 2 cut(s) 608, 2849
BstAPI GCANNNNNTGC 3 cut(s) 1827, 1903, 3611
BstC8I GCNNGC 6 cut(s) 335, 867, 3180, 3517, 3649, 3669
BstDSI CCRYGG 1 cut(s) 1405
BstFNI CGCG 3 cut(s) 200, 549, 3266
BstH2I RGCGCY 1 cut(s) 278
BstHHI GCGC 6 cut(s) 202, 277, 549, 742, 2808, 3266
BstMAI GTCTC 5 cut(s) 458, 1437, 1565, 2330, 2865
BstMCI CGRYCG 2 cut(s) 195, 3360
BstNI CCWGG 5 cut(s) 1512, 2129, 3559, 3616, 3657
BstNSI RCATGY 4 cut(s) 653, 799, 1527, 2020
BstSCI CCNGG 8 cut(s) 413, 1188, 1510, 2127, 3113, 3557, 3614, 3655
BstSFI CTRYAG 9 cut(s) 828, 1004, 1828, 2256, 2331, 2828, 2865, 3716, 3782
BstUI CGCG 3 cut(s) 200, 549, 3266
BstV2I GAAGAC 3 cut(s) 495, 1431, 1461
BstX2I RGATCY 2 cut(s) 859, 1294
BstYI RGATCY 2 cut(s) 859, 1294
Bsu36I CCTNAGG 1 cut(s) 2751
BsuI GTATCC 1 cut(s) 3859
BtgI CCRYGG 1 cut(s) 1405
BtgZI GCGATG 1 cut(s) 3958
BtrI CACGTC 1 cut(s) 1801
BtsI GCAGTG 2 cut(s) 1001, 3713
BtsIMutI CAGTG 8 cut(s) 690, 1001, 1753, 2605, 2927, 3535, 3549, 3713
BveI ACCTGC 4 cut(s) 193, 328, 2227, 2263
Cac8I GCNNGC 6 cut(s) 335, 867, 3180, 3517, 3649, 3669
CciI TCATGA 2 cut(s) 1176, 3157
CfoI GCGC 6 cut(s) 202, 277, 549, 742, 2808, 3266
Cfr13I GGNCC 7 cut(s) 288, 1375, 1680, 2125, 2746, 2845, 3555
CseI GACGC 4 cut(s) 340, 1314, 2180, 3608
CsiI ACCWGGT 1 cut(s) 1510
Csp6I GTAC 6 cut(s) 256, 562, 934, 1508, 3073, 3406
CviQI GTAC 6 cut(s) 256, 562, 934, 1508, 3073, 3406
DraIII CACNNNGTG 1 cut(s) 1448
DriI GACNNNNNGTC 1 cut(s) 1750
EaeI YGGCCR 4 cut(s) 870, 1030, 2448, 3819
Eam1104I CTCTTC 6 cut(s) 60, 83, 116, 1563, 2628, 3557
Eam1105I GACNNNNNGTC 1 cut(s) 1750
EarI CTCTTC 6 cut(s) 60, 83, 116, 1563, 2628, 3557
EciI GGCGGA 3 cut(s) 73, 115, 245
Ecl136II GAGCTC 3 cut(s) 70, 3567, 3667
Eco130I CCWWGG 5 cut(s) 1405, 1459, 1718, 2406, 3345
Eco147I AGGCCT 2 cut(s) 29, 2697
Eco24I GRGCYC 3 cut(s) 72, 3569, 3669
Eco31I GGTCTC 1 cut(s) 1565
Eco47I GGWCC 5 cut(s) 288, 1375, 2125, 2746, 3555
Eco53kI GAGCTC 3 cut(s) 70, 3567, 3667
Eco57I CTGAAG 5 cut(s) 2652, 2921, 3492, 3729, 3858
Eco81I CCTNAGG 1 cut(s) 2751
EcoICRI GAGCTC 3 cut(s) 70, 3567, 3667
EcoO109I RGGNCCY 3 cut(s) 1680, 2746, 2845
EcoRI GAATTC 4 cut(s) 634, 1060, 1213, 2734
EcoRII CCWGG 5 cut(s) 1510, 2127, 3557, 3614, 3655
EcoT14I CCWWGG 5 cut(s) 1405, 1459, 1718, 2406, 3345
EcoT22I ATGCAT 3 cut(s) 2108, 2149, 3306
EcoT38I GRGCYC 3 cut(s) 72, 3569, 3669
ErhI CCWWGG 5 cut(s) 1405, 1459, 1718, 2406, 3345
FalI AAGNNNNNCTT 3 cut(s) 1211, 1243, 3942
FaqI GGGAC 7 cut(s) 301, 1205, 1757, 2759, 2946, 3284, 3568
FauI CCCGC 2 cut(s) 1282, 2736
FauNDI CATATG 2 cut(s) 1055, 3816
FbaI TGATCA 2 cut(s) 1861, 1869
FblI GTMKAC 1 cut(s) 354
FriOI GRGCYC 3 cut(s) 72, 3569, 3669
FspBI CTAG 8 cut(s) 594, 1298, 1565, 1736, 2099, 3516, 3597, 3833
GlaI GCGC 6 cut(s) 201, 276, 548, 741, 2807, 3265
GsuI CTGGAG 7 cut(s) 26, 146, 1657, 3031, 3239, 3446, 3813
HaeII RGCGCY 1 cut(s) 278
HapII CCGG 5 cut(s) 386, 414, 512, 1189, 3114
HgaI GACGC 4 cut(s) 340, 1314, 2180, 3608
HhaI GCGC 6 cut(s) 202, 277, 549, 742, 2808, 3266
Hin1I GRCGYC 3 cut(s) 351, 2191, 3619
Hin6I GCGC 6 cut(s) 200, 275, 547, 740, 2806, 3264
HinP1I GCGC 6 cut(s) 200, 275, 547, 740, 2806, 3264
HincII GTYRAC 2 cut(s) 355, 2221
HindII GTYRAC 2 cut(s) 355, 2221
HindIII AAGCTT 1 cut(s) 3282
HpaII CCGG 5 cut(s) 386, 414, 512, 1189, 3114
Hpy166II GTNNAC 6 cut(s) 256, 355, 691, 2221, 2531, 3191
Hpy8I GTNNAC 6 cut(s) 256, 355, 691, 2221, 2531, 3191
Hpy99I CGWCG 3 cut(s) 347, 356, 359
HpyCH4IV ACGT 1 cut(s) 1800
HpySE526I ACGT 1 cut(s) 1800
Hsp92I GRCGYC 3 cut(s) 351, 2191, 3619
HspAI GCGC 6 cut(s) 200, 275, 547, 740, 2806, 3264
KflI GGGWCCC 1 cut(s) 2746
Kpn2I TCCGGA 1 cut(s) 385
Ksp22I TGATCA 2 cut(s) 1861, 1869
LguI GCTCTTC 2 cut(s) 60, 3557
LweI GCATC 8 cut(s) 687, 1677, 2161, 2968, 3010, 3601, 3684, 3741
MabI ACCWGGT 1 cut(s) 1510
MaeI CTAG 8 cut(s) 594, 1298, 1565, 1736, 2099, 3516, 3597, 3833
MaeII ACGT 1 cut(s) 1800
MaeIII GTNAC 8 cut(s) 551, 568, 645, 920, 1117, 3028, 3441, 3810
MbiI CCGCTC 1 cut(s) 631
MfeI CAATTG 1 cut(s) 2541
MflI RGATCY 2 cut(s) 859, 1294
MhlI GDGCHC 3 cut(s) 72, 3569, 3669
MlsI TGGCCA 2 cut(s) 1032, 2450
MluNI TGGCCA 2 cut(s) 1032, 2450
MlyI GAGTC 5 cut(s) 391, 433, 1015, 1073, 1097
MmeI TCCRAC 8 cut(s) 191, 325, 567, 765, 998, 1016, 1353, 3725
Mox20I TGGCCA 2 cut(s) 1032, 2450
Mph1103I ATGCAT 3 cut(s) 2108, 2149, 3306
MroI TCCGGA 1 cut(s) 385
MscI TGGCCA 2 cut(s) 1032, 2450
MslI CAYNNNNRTG 3 cut(s) 2058, 3035, 3578
Msp20I TGGCCA 2 cut(s) 1032, 2450
MspA1I CMGCKG 4 cut(s) 1067, 2255, 2743, 2941
MspCI CTTAAG 2 cut(s) 608, 2849
MspI CCGG 5 cut(s) 386, 414, 512, 1189, 3114
MspR9I CCNGG 8 cut(s) 415, 1190, 1512, 2129, 3115, 3559, 3616, 3657
MunI CAATTG 1 cut(s) 2541
Mva1269I GAATGC 3 cut(s) 2108, 2505, 3343
MvaI CCWGG 5 cut(s) 1512, 2129, 3559, 3616, 3657
MvnI CGCG 3 cut(s) 200, 549, 3266
NciI CCSGG 3 cut(s) 415, 1190, 3115
NcoI CCATGG 1 cut(s) 1405
NdeI CATATG 2 cut(s) 1055, 3816
NheI GCTAGC 1 cut(s) 3515
NlaIV GGNNCC 9 cut(s) 289, 1351, 1377, 1681, 2032, 2596, 2747, 2748, 3556
NmuCI GTSAC 3 cut(s) 551, 3028, 3810
NsiI ATGCAT 3 cut(s) 2108, 2149, 3306
NspI RCATGY 4 cut(s) 653, 799, 1527, 2020
PagI TCATGA 2 cut(s) 1176, 3157
PaqCI CACCTGC 1 cut(s) 2227
PceI AGGCCT 2 cut(s) 29, 2697
PciI ACATGT 1 cut(s) 2016
PciSI GCTCTTC 2 cut(s) 60, 3557
PcsI WCGNNNNNNNCGW 4 cut(s) 348, 351, 360, 498
PctI GAATGC 3 cut(s) 2108, 2505, 3343
PflFI GACNNNGTC 1 cut(s) 899
PflMI CCANNNNNTGG 2 cut(s) 543, 2090
PfoI TCCNGGA 1 cut(s) 1188
Ple19I CGATCG 1 cut(s) 195
PleI GAGTC 5 cut(s) 390, 433, 1015, 1073, 1097
PpsI GAGTC 5 cut(s) 390, 433, 1015, 1073, 1097
PpuMI RGGWCCY 1 cut(s) 2746
PscI ACATGT 1 cut(s) 2016
PshBI ATTAAT 1 cut(s) 807
PsiI TTATAA 1 cut(s) 2012
Psp124BI GAGCTC 3 cut(s) 72, 3569, 3669
Psp5II RGGWCCY 1 cut(s) 2746
Psp6I CCWGG 5 cut(s) 1510, 2127, 3557, 3614, 3655
PspGI CCWGG 5 cut(s) 1510, 2127, 3557, 3614, 3655
PspN4I GGNNCC 9 cut(s) 289, 1351, 1377, 1681, 2032, 2596, 2747, 2748, 3556
PspPI GGNCC 7 cut(s) 288, 1375, 1680, 2125, 2746, 2845, 3555
PspPPI RGGWCCY 1 cut(s) 2746
PstI CTGCAG 7 cut(s) 1008, 1832, 2260, 2832, 2869, 3720, 3786
PsuI RGATCY 2 cut(s) 859, 1294
PsyI GACNNNGTC 1 cut(s) 899
PvuI CGATCG 1 cut(s) 195
PvuII CAGCTG 3 cut(s) 1067, 2255, 2941
RsaI GTAC 6 cut(s) 257, 563, 935, 1509, 3074, 3407
RsaNI GTAC 6 cut(s) 256, 562, 934, 1508, 3073, 3406
RseI CAYNNNNRTG 3 cut(s) 2058, 3035, 3578
SacI GAGCTC 3 cut(s) 72, 3569, 3669
SalI GTCGAC 1 cut(s) 353
SapI GCTCTTC 2 cut(s) 60, 3557
Sau96I GGNCC 7 cut(s) 288, 1375, 1680, 2125, 2746, 2845, 3555
ScaI AGTACT 2 cut(s) 563, 3407
SchI GAGTC 5 cut(s) 391, 433, 1015, 1073, 1097
ScrFI CCNGG 8 cut(s) 415, 1190, 1512, 2129, 3115, 3559, 3616, 3657
SduI GDGCHC 3 cut(s) 72, 3569, 3669
SexAI ACCWGGT 1 cut(s) 1510
SfaNI GCATC 8 cut(s) 687, 1677, 2161, 2968, 3010, 3601, 3684, 3741
SfcI CTRYAG 9 cut(s) 828, 1004, 1828, 2256, 2331, 2828, 2865, 3716, 3782
SgrDI CGTCGACG 1 cut(s) 353
SinI GGWCC 5 cut(s) 288, 1375, 2125, 2746, 3555
SmiMI CAYNNNNRTG 3 cut(s) 2058, 3035, 3578
SmlI CTYRAG 7 cut(s) 11, 473, 608, 839, 1946, 2465, 2849
SmoI CTYRAG 7 cut(s) 11, 473, 608, 839, 1946, 2465, 2849
SseBI AGGCCT 2 cut(s) 29, 2697
SspI AATATT 1 cut(s) 526
SspMI CTAG 8 cut(s) 594, 1298, 1565, 1736, 2099, 3516, 3597, 3833
SstI GAGCTC 3 cut(s) 72, 3569, 3669
StuI AGGCCT 2 cut(s) 29, 2697
StyD4I CCNGG 8 cut(s) 413, 1188, 1510, 2127, 3113, 3557, 3614, 3655
StyI CCWWGG 5 cut(s) 1405, 1459, 1718, 2406, 3345
TaiI ACGT 1 cut(s) 1803
TatI WGTACW 2 cut(s) 561, 3405
TauI GCSGC 5 cut(s) 108, 200, 363, 872, 3824
TscAI CASTG 8 cut(s) 690, 1008, 1753, 2605, 2934, 3535, 3556, 3720
TseFI GTSAC 3 cut(s) 551, 3028, 3810
Tsp45I GTSAC 3 cut(s) 551, 3028, 3810
TspGWI ACGGA 3 cut(s) 1342, 2564, 3632
TspRI CASTG 8 cut(s) 690, 1008, 1753, 2605, 2934, 3535, 3556, 3720
Tth111I GACNNNGTC 1 cut(s) 899
Van91I CCANNNNNTGG 2 cut(s) 543, 2090
Vha464I CTTAAG 2 cut(s) 608, 2849
VpaK11BI GGWCC 5 cut(s) 288, 1375, 2125, 2746, 3555
VspI ATTAAT 1 cut(s) 807
XapI RAATTY 9 cut(s) 634, 833, 947, 1060, 1172, 1213, 1852, 2351, 2734
XbaI TCTAGA 3 cut(s) 1297, 1564, 2098
XceI RCATGY 4 cut(s) 653, 799, 1527, 2020
XcmI CCANNNNNNNNNTGG 1 cut(s) 3214
XmiI GTMKAC 1 cut(s) 354
XspI CTAG 8 cut(s) 594, 1298, 1565, 1736, 2099, 3516, 3597, 3833
ZrmI AGTACT 2 cut(s) 563, 3407
Zsp2I ATGCAT 3 cut(s) 2108, 2149, 3306
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.