Polyadenylate-binding protein-interacting protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G11440 AT5G11440 AT5G25540 AT5G25540 AT5G25540 |
| fragaria_vesca | FvH4_2g30160 FvH4_2g30160 FvH4_2g30160 FvH4_2g30160 FvH4_2g30160 |
| malus_domestica | MD08G1136600.v1.1 |
| prunus_persica | Prupe.1G466700_v2.0.a1 Prupe.1G466700_v2.0.a1 Prupe.1G466700_v2.0.a1 Prupe.1G466700_v2.0.a1 |
| pyrus_communis | pycom08g11540 pycom15g10400 pycom15g10410 |
| rosa_chinensis | RchiOBHm_Chr6g0312751 |
| rosa_laevigata | RLG00000010301 |
| rosa_multiflora | Rmu_ssc0000412.1_g000014 |
| rosa_roxburghii | Rroxscaffold_7G00156530 |
| rosa_rugosa | Rorug06G0399200 Rorug06G0399300 Rorug06G0399400 Rorug06G0399500 |
| rosa_samantha | Rh6AG516300 Rh6BG527600 Rh6CG532500 Rh6DG518600 |
| rosa_wichuraiana | Rw6G044860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 216 |
| AciI | CCGC | 1 cut(s) | 502 |
| AcuI | CTGAAG | 2 cut(s) | 251, 408 |
| AfaI | GTAC | 3 cut(s) | 48, 385, 432 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 140 |
| AgsI | TTSAA | 2 cut(s) | 25, 155 |
| AjnI | CCWGG | 1 cut(s) | 286 |
| AluBI | AGCT | 4 cut(s) | 41, 229, 278, 392 |
| AluI | AGCT | 4 cut(s) | 41, 229, 278, 392 |
| Ama87I | CYCGRG | 1 cut(s) | 371 |
| ApeKI | GCWGC | 5 cut(s) | 35, 38, 109, 112, 115 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 402 |
| AsuHPI | GGTGA | 3 cut(s) | 180, 192, 437 |
| AsuII | TTCGAA | 1 cut(s) | 455 |
| AvaI | CYCGRG | 1 cut(s) | 371 |
| BbsI | GAAGAC | 1 cut(s) | 444 |
| BbvCI | CCTCAGC | 1 cut(s) | 393 |
| BbvI | GCAGC | 5 cut(s) | 47, 50, 121, 124, 127 |
| BccI | CCATC | 4 cut(s) | 205, 211, 244, 464 |
| BciT130I | CCWGG | 1 cut(s) | 288 |
| BciVI | GTATCC | 2 cut(s) | 509, 526 |
| BfuI | GTATCC | 2 cut(s) | 509, 526 |
| BisI | GCNGC | 5 cut(s) | 36, 39, 110, 113, 116 |
| BlsI | GCNGC | 5 cut(s) | 37, 40, 111, 114, 117 |
| BmcAI | AGTACT | 1 cut(s) | 385 |
| Bme1390I | CCNGG | 1 cut(s) | 288 |
| BmeT110I | CYCGRG | 1 cut(s) | 371 |
| BmrFI | CCNGG | 1 cut(s) | 288 |
| BmsI | GCATC | 2 cut(s) | 334, 491 |
| BpiI | GAAGAC | 1 cut(s) | 444 |
| Bpu10I | CCTNAGC | 1 cut(s) | 393 |
| Bpu14I | TTCGAA | 1 cut(s) | 455 |
| BsaJI | CCNNGG | 1 cut(s) | 286 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 503 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 140 |
| Bse1I | ACTGG | 1 cut(s) | 420 |
| BseBI | CCWGG | 1 cut(s) | 288 |
| BseDI | CCNNGG | 1 cut(s) | 286 |
| BseGI | GGATG | 1 cut(s) | 241 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 140 |
| BseMII | CTCAG | 3 cut(s) | 198, 384, 426 |
| BseNI | ACTGG | 1 cut(s) | 420 |
| BseRI | GAGGAG | 1 cut(s) | 511 |
| BseXI | GCAGC | 5 cut(s) | 47, 50, 121, 124, 127 |
| BsiHKCI | CYCGRG | 1 cut(s) | 371 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 140 |
| BsoBI | CYCGRG | 1 cut(s) | 371 |
| Bsp119I | TTCGAA | 1 cut(s) | 455 |
| Bsp143I | GATC | 2 cut(s) | 337, 438 |
| BspACI | CCGC | 1 cut(s) | 502 |
| BspCNI | CTCAG | 3 cut(s) | 199, 385, 427 |
| BspT104I | TTCGAA | 1 cut(s) | 455 |
| BsrI | ACTGG | 1 cut(s) | 420 |
| BssECI | CCNNGG | 1 cut(s) | 286 |
| BssMI | GATC | 2 cut(s) | 337, 438 |
| BssNAI | GTATAC | 1 cut(s) | 217 |
| Bst1107I | GTATAC | 1 cut(s) | 217 |
| Bst2UI | CCWGG | 1 cut(s) | 288 |
| Bst4CI | ACNGT | 1 cut(s) | 383 |
| BstBI | TTCGAA | 1 cut(s) | 455 |
| BstDEI | CTNAG | 4 cut(s) | 192, 207, 393, 435 |
| BstF5I | GGATG | 1 cut(s) | 241 |
| BstKTI | GATC | 2 cut(s) | 340, 441 |
| BstMBI | GATC | 2 cut(s) | 337, 438 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 115, 124 |
| BstNI | CCWGG | 1 cut(s) | 288 |
| BstNSI | RCATGY | 1 cut(s) | 109 |
| BstSCI | CCNGG | 1 cut(s) | 286 |
| BstV1I | GCAGC | 5 cut(s) | 47, 50, 121, 124, 127 |
| BstV2I | GAAGAC | 1 cut(s) | 444 |
| BstZ17I | GTATAC | 1 cut(s) | 217 |
| BsuI | GTATCC | 2 cut(s) | 509, 526 |
| BtsCI | GGATG | 1 cut(s) | 241 |
| BtsIMutI | CAGTG | 1 cut(s) | 413 |
| Csp6I | GTAC | 3 cut(s) | 47, 384, 431 |
| CviAII | CATG | 2 cut(s) | 106, 256 |
| CviJI | RGCY | 6 cut(s) | 41, 88, 229, 278, 326, 392 |
| CviKI_1 | RGCY | 6 cut(s) | 41, 88, 229, 278, 326, 392 |
| CviQI | GTAC | 3 cut(s) | 47, 384, 431 |
| DdeI | CTNAG | 4 cut(s) | 192, 207, 393, 435 |
| DpnI | GATC | 2 cut(s) | 339, 440 |
| DpnII | GATC | 2 cut(s) | 337, 438 |
| Eco57I | CTGAAG | 2 cut(s) | 251, 408 |
| Eco88I | CYCGRG | 1 cut(s) | 371 |
| EcoRII | CCWGG | 1 cut(s) | 286 |
| FaeI | CATG | 2 cut(s) | 109, 259 |
| FaiI | YATR | 7 cut(s) | 45, 107, 141, 147, 217, 257, 283 |
| FatI | CATG | 2 cut(s) | 105, 255 |
| FblI | GTMKAC | 1 cut(s) | 216 |
| Fnu4HI | GCNGC | 5 cut(s) | 36, 39, 110, 113, 116 |
| FokI | GGATG | 1 cut(s) | 248 |
| Fsp4HI | GCNGC | 5 cut(s) | 36, 39, 110, 113, 116 |
| GluI | GCNGC | 5 cut(s) | 36, 39, 110, 113, 116 |
| Hin1II | CATG | 2 cut(s) | 109, 259 |
| HinfI | GANTC | 4 cut(s) | 25, 302, 364, 449 |
| HphI | GGTGA | 3 cut(s) | 180, 192, 437 |
| Hpy166II | GTNNAC | 2 cut(s) | 217, 319 |
| Hpy188I | TCNGA | 1 cut(s) | 208 |
| Hpy188III | TCNNGA | 6 cut(s) | 9, 55, 341, 373, 407, 525 |
| Hpy8I | GTNNAC | 2 cut(s) | 217, 319 |
| HpyAV | CCTTC | 3 cut(s) | 59, 226, 413 |
| HpyCH4III | ACNGT | 1 cut(s) | 383 |
| HpyCH4IV | ACGT | 1 cut(s) | 513 |
| HpyCH4V | TGCA | 3 cut(s) | 109, 347, 482 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 115, 124 |
| HpyF3I | CTNAG | 4 cut(s) | 192, 207, 393, 435 |
| HpySE526I | ACGT | 1 cut(s) | 513 |
| Hsp92II | CATG | 2 cut(s) | 109, 259 |
| Kzo9I | GATC | 2 cut(s) | 337, 438 |
| LpnPI | CCDG | 7 cut(s) | 102, 137, 273, 300, 401, 420, 447 |
| Lsp1109I | GCAGC | 5 cut(s) | 47, 50, 121, 124, 127 |
| LweI | GCATC | 2 cut(s) | 334, 491 |
| MaeII | ACGT | 1 cut(s) | 513 |
| MaeIII | GTNAC | 3 cut(s) | 91, 186, 198 |
| MalI | GATC | 2 cut(s) | 339, 440 |
| MboI | GATC | 2 cut(s) | 337, 438 |
| MboII | GAAGA | 2 cut(s) | 444, 483 |
| MlyI | GAGTC | 2 cut(s) | 311, 458 |
| MnlI | CCTC | 2 cut(s) | 232, 388 |
| MroXI | GAANNNNTTC | 1 cut(s) | 402 |
| MspA1I | CMGCKG | 1 cut(s) | 229 |
| MspR9I | CCNGG | 1 cut(s) | 288 |
| MvaI | CCWGG | 1 cut(s) | 288 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 115, 124 |
| NdeII | GATC | 2 cut(s) | 337, 438 |
| NlaIII | CATG | 2 cut(s) | 109, 259 |
| NmuCI | GTSAC | 3 cut(s) | 91, 186, 198 |
| NspI | RCATGY | 1 cut(s) | 109 |
| NspV | TTCGAA | 1 cut(s) | 455 |
| PaeR7I | CTCGAG | 1 cut(s) | 371 |
| PdmI | GAANNNNTTC | 1 cut(s) | 402 |
| PfeI | GAWTC | 2 cut(s) | 25, 364 |
| PkrI | GCNGC | 5 cut(s) | 37, 40, 111, 114, 117 |
| PleI | GAGTC | 2 cut(s) | 310, 457 |
| PpsI | GAGTC | 2 cut(s) | 310, 457 |
| Psp6I | CCWGG | 1 cut(s) | 286 |
| PspGI | CCWGG | 1 cut(s) | 286 |
| PvuII | CAGCTG | 1 cut(s) | 229 |
| RsaI | GTAC | 3 cut(s) | 48, 385, 432 |
| RsaNI | GTAC | 3 cut(s) | 47, 384, 431 |
| SatI | GCNGC | 5 cut(s) | 36, 39, 110, 113, 116 |
| Sau3AI | GATC | 2 cut(s) | 337, 438 |
| ScaI | AGTACT | 1 cut(s) | 385 |
| SchI | GAGTC | 2 cut(s) | 311, 458 |
| ScrFI | CCNGG | 1 cut(s) | 288 |
| SfaNI | GCATC | 2 cut(s) | 334, 491 |
| Sfr274I | CTCGAG | 1 cut(s) | 371 |
| SfuI | TTCGAA | 1 cut(s) | 455 |
| SlaI | CTCGAG | 1 cut(s) | 371 |
| SmlI | CTYRAG | 1 cut(s) | 371 |
| SmoI | CTYRAG | 1 cut(s) | 371 |
| SsiI | CCGC | 1 cut(s) | 502 |
| StyD4I | CCNGG | 1 cut(s) | 286 |
| TaaI | ACNGT | 1 cut(s) | 383 |
| TaiI | ACGT | 1 cut(s) | 516 |
| TaqI | TCGA | 4 cut(s) | 56, 354, 372, 455 |
| TatI | WGTACW | 1 cut(s) | 383 |
| TfiI | GAWTC | 2 cut(s) | 25, 364 |
| TscAI | CASTG | 1 cut(s) | 420 |
| TseFI | GTSAC | 3 cut(s) | 91, 186, 198 |
| TseI | GCWGC | 5 cut(s) | 35, 38, 109, 112, 115 |
| Tsp45I | GTSAC | 3 cut(s) | 91, 186, 198 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 420 |
| XceI | RCATGY | 1 cut(s) | 109 |
| XhoI | CTCGAG | 1 cut(s) | 371 |
| XmiI | GTMKAC | 1 cut(s) | 216 |
| XmnI | GAANNNNTTC | 1 cut(s) | 402 |
| ZrmI | AGTACT | 1 cut(s) | 385 |