Chloride channel protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G26240 AT5G26240 |
| fragaria_vesca | FvH4_4g15130 FvH4_4g15130 |
| malus_domestica | MD13G1188900.v1.1 MD16G1189700.v1.1 |
| prunus_persica | Prupe.1G156000_v2.0.a1 Prupe.1G156000_v2.0.a1 Prupe.1G156000_v2.0.a1 Prupe.1G156000_v2.0.a1 Prupe.1G156000_v2.0.a1 Prupe.1G156000_v2.0.a1 Prupe.1G156000_v2.0.a1 |
| pyrus_communis | pycom13g16330 pycom16g15940 |
| rosa_chinensis | RchiOBHm_Chr3g0497631 RchiOBHm_Chr4g0416741 |
| rosa_laevigata | RLG00000007956 RLG00000023042 |
| rosa_multiflora | Rmu_co8329069.1_g000001 Rmu_sc0023201.1_g000001 Rmu_sc0025051.1_g000001 Rmu_sc0038555.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00360610 Rroxscaffold_6G00395290 |
| rosa_rugosa | Rorug04G0144200 Rorug04G0144200 Rorug04G0144200 Rorug04G0144200 |
| rosa_samantha | Rh1BG229600 Rh1CG042200 Rh1DG027400 Rh4AG207000 Rh4BG204200 Rh7CG094800 |
| rosa_wichuraiana | Rw4G017510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1491, 1628 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 128 |
| AccB1I | GGYRCC | 3 cut(s) | 494, 596, 1458 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 752, 864 |
| AccI | GTMKAC | 2 cut(s) | 1351, 2160 |
| AccII | CGCG | 1 cut(s) | 2335 |
| AciI | CCGC | 6 cut(s) | 662, 828, 1413, 1561, 2335, 2354 |
| AclWI | GGATC | 5 cut(s) | 35, 260, 637, 1453, 1973 |
| AcoI | YGGCCR | 2 cut(s) | 659, 1417 |
| AcsI | RAATTY | 5 cut(s) | 298, 314, 649, 1228, 1306 |
| AcuI | CTGAAG | 3 cut(s) | 1098, 1724, 2055 |
| AcyI | GRCGYC | 2 cut(s) | 1042, 1459 |
| AfaI | GTAC | 5 cut(s) | 853, 1638, 1692, 2090, 2318 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 752, 864, 1181 |
| AflIII | ACRYGT | 1 cut(s) | 2142 |
| AhlI | ACTAGT | 1 cut(s) | 2300 |
| AjnI | CCWGG | 3 cut(s) | 1204, 1429, 1988 |
| AluBI | AGCT | 9 cut(s) | 185, 199, 269, 719, 958, 1118, 1385, 1498, 1535 |
| AluI | AGCT | 9 cut(s) | 185, 199, 269, 719, 958, 1118, 1385, 1498, 1535 |
| Alw21I | GWGCWC | 1 cut(s) | 1345 |
| Alw26I | GTCTC | 5 cut(s) | 57, 143, 1723, 2124, 2318 |
| AlwI | GGATC | 5 cut(s) | 35, 260, 637, 1453, 1973 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1175 |
| Ama87I | CYCGRG | 1 cut(s) | 1800 |
| AoxI | GGCC | 3 cut(s) | 659, 1417, 1653 |
| ApoI | RAATTY | 5 cut(s) | 298, 314, 649, 1228, 1306 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1170, 1310 |
| AspLEI | GCGC | 2 cut(s) | 1319, 1461 |
| AspS9I | GGNCC | 1 cut(s) | 578 |
| AsuC2I | CCSGG | 1 cut(s) | 492 |
| AsuHPI | GGTGA | 5 cut(s) | 101, 131, 1673, 1898, 2227 |
| AvaI | CYCGRG | 1 cut(s) | 1800 |
| AvaII | GGWCC | 1 cut(s) | 578 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1721, 1754 |
| BanI | GGYRCC | 3 cut(s) | 494, 596, 1458 |
| BanII | GRGCYC | 1 cut(s) | 745 |
| BauI | CACGAG | 2 cut(s) | 54, 1876 |
| BbsI | GAAGAC | 1 cut(s) | 2145 |
| Bbv12I | GWGCWC | 1 cut(s) | 1345 |
| BccI | CCATC | 5 cut(s) | 303, 651, 858, 923, 2332 |
| BceAI | ACGGC | 1 cut(s) | 1640 |
| BciT130I | CCWGG | 3 cut(s) | 1206, 1431, 1990 |
| BclI | TGATCA | 1 cut(s) | 2232 |
| BcnI | CCSGG | 1 cut(s) | 492 |
| BcoDI | GTCTC | 5 cut(s) | 57, 143, 1723, 2124, 2318 |
| BcuI | ACTAGT | 1 cut(s) | 2300 |
| BfaI | CTAG | 3 cut(s) | 654, 2301, 2360 |
| BfmI | CTRYAG | 1 cut(s) | 1386 |
| BfoI | RGCGCY | 1 cut(s) | 1462 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 1467, 1707 |
| BglII | AGATCT | 1 cut(s) | 2095 |
| BlpI | GCTNAGC | 1 cut(s) | 559 |
| Bme1390I | CCNGG | 4 cut(s) | 492, 1206, 1431, 1990 |
| Bme18I | GGWCC | 1 cut(s) | 578 |
| BmeT110I | CYCGRG | 1 cut(s) | 1800 |
| BmgT120I | GGNCC | 1 cut(s) | 578 |
| BmiI | GGNNCC | 3 cut(s) | 496, 598, 1460 |
| BmrFI | CCNGG | 4 cut(s) | 492, 1206, 1431, 1990 |
| BmrI | ACTGGG | 1 cut(s) | 740 |
| BmsI | GCATC | 5 cut(s) | 617, 1104, 1285, 1548, 1654 |
| BmuI | ACTGGG | 1 cut(s) | 740 |
| BpiI | GAAGAC | 1 cut(s) | 2145 |
| BpmI | CTGGAG | 2 cut(s) | 741, 1188 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 559 |
| BpuMI | CCSGG | 1 cut(s) | 492 |
| BsaBI | GATNNNNATC | 1 cut(s) | 684 |
| BsaHI | GRCGYC | 2 cut(s) | 1042, 1459 |
| BsaI | GGTCTC | 2 cut(s) | 57, 1723 |
| BsaJI | CCNNGG | 2 cut(s) | 564, 858 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 752, 864, 1181 |
| Bse118I | RCCGGY | 1 cut(s) | 1415 |
| Bse1I | ACTGG | 3 cut(s) | 265, 746, 1420 |
| Bse3DI | GCAATG | 1 cut(s) | 603 |
| Bse8I | GATNNNNATC | 1 cut(s) | 684 |
| BseBI | CCWGG | 3 cut(s) | 1206, 1431, 1990 |
| BseDI | CCNNGG | 2 cut(s) | 564, 858 |
| BseGI | GGATG | 7 cut(s) | 314, 716, 869, 925, 1297, 1569, 2343 |
| BseJI | GATNNNNATC | 1 cut(s) | 684 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 752, 864, 1181 |
| BseMI | GCAATG | 1 cut(s) | 603 |
| BseMII | CTCAG | 3 cut(s) | 447, 1301, 1358 |
| BseNI | ACTGG | 3 cut(s) | 265, 746, 1420 |
| BseRI | GAGGAG | 2 cut(s) | 788, 1523 |
| BseYI | CCCAGC | 2 cut(s) | 356, 1528 |
| BsgI | GTGCAG | 2 cut(s) | 735, 2331 |
| Bsh1236I | CGCG | 1 cut(s) | 2335 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2354 |
| BshFI | GGCC | 3 cut(s) | 661, 1419, 1655 |
| BshNI | GGYRCC | 3 cut(s) | 494, 596, 1458 |
| BsiEI | CGRYCG | 1 cut(s) | 2354 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1345 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1800 |
| BsiSI | CCGG | 3 cut(s) | 492, 1416, 2173 |
| BslFI | GGGAC | 1 cut(s) | 44 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 752, 864, 1181 |
| BsmAI | GTCTC | 5 cut(s) | 57, 143, 1723, 2124, 2318 |
| BsmBI | CGTCTC | 1 cut(s) | 2124 |
| BsmFI | GGGAC | 1 cut(s) | 44 |
| BsmI | GAATGC | 2 cut(s) | 450, 1710 |
| BsnI | GGCC | 3 cut(s) | 661, 1419, 1655 |
| Bso31I | GGTCTC | 2 cut(s) | 57, 1723 |
| BsoBI | CYCGRG | 1 cut(s) | 1800 |
| Bsp1286I | GDGCHC | 2 cut(s) | 745, 1345 |
| Bsp1407I | TGTACA | 1 cut(s) | 2088 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 559 |
| Bsp19I | CCATGG | 1 cut(s) | 858 |
| BspACI | CCGC | 6 cut(s) | 662, 828, 1413, 1561, 2335, 2354 |
| BspANI | GGCC | 3 cut(s) | 661, 1419, 1655 |
| BspCNI | CTCAG | 3 cut(s) | 448, 1300, 1357 |
| BspFNI | CGCG | 1 cut(s) | 2335 |
| BspLI | GGNNCC | 3 cut(s) | 496, 598, 1460 |
| BspPI | GGATC | 5 cut(s) | 35, 260, 637, 1453, 1973 |
| BspT107I | GGYRCC | 3 cut(s) | 494, 596, 1458 |
| BspTNI | GGTCTC | 2 cut(s) | 57, 1723 |
| BsrDI | GCAATG | 1 cut(s) | 603 |
| BsrFI | RCCGGY | 1 cut(s) | 1415 |
| BsrGI | TGTACA | 1 cut(s) | 2088 |
| BsrI | ACTGG | 3 cut(s) | 265, 746, 1420 |
| BssAI | RCCGGY | 1 cut(s) | 1415 |
| BssECI | CCNNGG | 2 cut(s) | 564, 858 |
| BssNAI | GTATAC | 1 cut(s) | 2161 |
| BssNI | GRCGYC | 2 cut(s) | 1042, 1459 |
| BssSI | CACGAG | 2 cut(s) | 54, 1876 |
| BssT1I | CCWWGG | 2 cut(s) | 564, 858 |
| Bst1107I | GTATAC | 1 cut(s) | 2161 |
| Bst2BI | CACGAG | 2 cut(s) | 54, 1876 |
| Bst2UI | CCWGG | 3 cut(s) | 1206, 1431, 1990 |
| Bst4CI | ACNGT | 6 cut(s) | 113, 119, 1570, 2006, 2295, 2321 |
| BstACI | GRCGYC | 2 cut(s) | 1042, 1459 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1158, 1823 |
| BstAUI | TGTACA | 1 cut(s) | 2088 |
| BstC8I | GCNNGC | 4 cut(s) | 601, 1093, 1417, 1699 |
| BstDEI | CTNAG | 7 cut(s) | 391, 456, 559, 1142, 1287, 1344, 1734 |
| BstDSI | CCRYGG | 1 cut(s) | 858 |
| BstF5I | GGATG | 7 cut(s) | 314, 716, 869, 925, 1297, 1569, 2343 |
| BstFNI | CGCG | 1 cut(s) | 2335 |
| BstH2I | RGCGCY | 1 cut(s) | 1462 |
| BstHHI | GCGC | 2 cut(s) | 1319, 1461 |
| BstMAI | GTCTC | 5 cut(s) | 57, 143, 1723, 2124, 2318 |
| BstMCI | CGRYCG | 1 cut(s) | 2354 |
| BstNI | CCWGG | 3 cut(s) | 1206, 1431, 1990 |
| BstNSI | RCATGY | 4 cut(s) | 1095, 1474, 1747, 2146 |
| BstSCI | CCNGG | 4 cut(s) | 490, 1204, 1429, 1988 |
| BstSFI | CTRYAG | 1 cut(s) | 1386 |
| BstUI | CGCG | 1 cut(s) | 2335 |
| BstV2I | GAAGAC | 1 cut(s) | 2145 |
| BstX2I | RGATCY | 2 cut(s) | 629, 2095 |
| BstYI | RGATCY | 2 cut(s) | 629, 2095 |
| BstZ17I | GTATAC | 1 cut(s) | 2161 |
| BsuRI | GGCC | 3 cut(s) | 661, 1419, 1655 |
| BtgI | CCRYGG | 1 cut(s) | 858 |
| BtsCI | GGATG | 7 cut(s) | 314, 716, 869, 925, 1297, 1569, 2343 |
| BtsI | GCAGTG | 2 cut(s) | 1401, 2286 |
| BtsIMutI | CAGTG | 4 cut(s) | 1345, 1401, 2286, 2326 |
| Cac8I | GCNNGC | 4 cut(s) | 601, 1093, 1417, 1699 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1175 |
| CfoI | GCGC | 2 cut(s) | 1319, 1461 |
| Cfr10I | RCCGGY | 1 cut(s) | 1415 |
| Cfr13I | GGNCC | 1 cut(s) | 578 |
| CseI | GACGC | 3 cut(s) | 1031, 1736, 2351 |
| Csp6I | GTAC | 5 cut(s) | 852, 1637, 1691, 2089, 2317 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 788, 823 |
| CviAII | CATG | 8 cut(s) | 786, 859, 1092, 1158, 1471, 1588, 1744, 2143 |
| CviQI | GTAC | 5 cut(s) | 852, 1637, 1691, 2089, 2317 |
| DdeI | CTNAG | 7 cut(s) | 391, 456, 559, 1142, 1287, 1344, 1734 |
| DinI | GGCGCC | 1 cut(s) | 1460 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 128 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 128 |
| EaeI | YGGCCR | 2 cut(s) | 659, 1417 |
| Eco130I | CCWWGG | 2 cut(s) | 564, 858 |
| Eco24I | GRGCYC | 1 cut(s) | 745 |
| Eco31I | GGTCTC | 2 cut(s) | 57, 1723 |
| Eco47I | GGWCC | 1 cut(s) | 578 |
| Eco57I | CTGAAG | 3 cut(s) | 1098, 1724, 2055 |
| Eco88I | CYCGRG | 1 cut(s) | 1800 |
| EcoO109I | RGGNCCY | 1 cut(s) | 578 |
| EcoRI | GAATTC | 1 cut(s) | 649 |
| EcoRII | CCWGG | 3 cut(s) | 1204, 1429, 1988 |
| EcoT14I | CCWWGG | 2 cut(s) | 564, 858 |
| EcoT22I | ATGCAT | 2 cut(s) | 1097, 2051 |
| EcoT38I | GRGCYC | 1 cut(s) | 745 |
| EgeI | GGCGCC | 1 cut(s) | 1460 |
| EheI | GGCGCC | 1 cut(s) | 1460 |
| ErhI | CCWWGG | 2 cut(s) | 564, 858 |
| Esp3I | CGTCTC | 1 cut(s) | 2124 |
| FaeI | CATG | 8 cut(s) | 789, 862, 1095, 1161, 1474, 1591, 1747, 2146 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 567, 599 |
| FaqI | GGGAC | 1 cut(s) | 44 |
| FatI | CATG | 8 cut(s) | 785, 858, 1091, 1157, 1470, 1587, 1743, 2142 |
| FauI | CCCGC | 1 cut(s) | 1420 |
| FbaI | TGATCA | 1 cut(s) | 2232 |
| FblI | GTMKAC | 2 cut(s) | 1351, 2160 |
| FokI | GGATG | 7 cut(s) | 321, 723, 876, 932, 1304, 1576, 2350 |
| FriOI | GRGCYC | 1 cut(s) | 745 |
| FspBI | CTAG | 3 cut(s) | 654, 2301, 2360 |
| GlaI | GCGC | 2 cut(s) | 1318, 1460 |
| GsaI | CCCAGC | 2 cut(s) | 360, 1532 |
| GsuI | CTGGAG | 2 cut(s) | 741, 1188 |
| HaeII | RGCGCY | 1 cut(s) | 1462 |
| HaeIII | GGCC | 3 cut(s) | 661, 1419, 1655 |
| HapII | CCGG | 3 cut(s) | 492, 1416, 2173 |
| HgaI | GACGC | 3 cut(s) | 1031, 1736, 2351 |
| HhaI | GCGC | 2 cut(s) | 1319, 1461 |
| Hin1I | GRCGYC | 2 cut(s) | 1042, 1459 |
| Hin1II | CATG | 8 cut(s) | 789, 862, 1095, 1161, 1474, 1591, 1747, 2146 |
| Hin6I | GCGC | 2 cut(s) | 1317, 1459 |
| HinP1I | GCGC | 2 cut(s) | 1317, 1459 |
| HincII | GTYRAC | 2 cut(s) | 800, 2298 |
| HindII | GTYRAC | 2 cut(s) | 800, 2298 |
| HindIII | AAGCTT | 1 cut(s) | 197 |
| HpaII | CCGG | 3 cut(s) | 492, 1416, 2173 |
| HphI | GGTGA | 5 cut(s) | 101, 131, 1673, 1898, 2227 |
| Hpy166II | GTNNAC | 6 cut(s) | 800, 887, 1196, 1352, 2161, 2298 |
| Hpy8I | GTNNAC | 6 cut(s) | 800, 887, 1196, 1352, 2161, 2298 |
| Hpy99I | CGWCG | 3 cut(s) | 89, 1047, 1661 |
| HpyAV | CCTTC | 6 cut(s) | 569, 1699, 1777, 1922, 1946, 2223 |
| HpyCH4III | ACNGT | 6 cut(s) | 113, 119, 1570, 2006, 2295, 2321 |
| HpyCH4IV | ACGT | 2 cut(s) | 216, 2127 |
| HpyF3I | CTNAG | 7 cut(s) | 391, 456, 559, 1142, 1287, 1344, 1734 |
| HpySE526I | ACGT | 2 cut(s) | 216, 2127 |
| Hsp92I | GRCGYC | 2 cut(s) | 1042, 1459 |
| Hsp92II | CATG | 8 cut(s) | 789, 862, 1095, 1161, 1474, 1591, 1747, 2146 |
| HspAI | GCGC | 2 cut(s) | 1317, 1459 |
| KasI | GGCGCC | 1 cut(s) | 1458 |
| KroI | GCCGGC | 1 cut(s) | 1415 |
| KroNI | GCCGGC | 1 cut(s) | 1417 |
| Ksp22I | TGATCA | 1 cut(s) | 2232 |
| LmnI | GCTCC | 3 cut(s) | 433, 1532, 2107 |
| LweI | GCATC | 5 cut(s) | 617, 1104, 1285, 1548, 1654 |
| MaeI | CTAG | 3 cut(s) | 654, 2301, 2360 |
| MaeII | ACGT | 2 cut(s) | 216, 2127 |
| MaeIII | GTNAC | 8 cut(s) | 113, 119, 209, 700, 778, 1390, 1716, 1919 |
| MboII | GAAGA | 9 cut(s) | 188, 226, 365, 393, 1090, 1225, 1270, 2066, 2150 |
| MflI | RGATCY | 2 cut(s) | 629, 2095 |
| MhlI | GDGCHC | 2 cut(s) | 745, 1345 |
| Mly113I | GGCGCC | 1 cut(s) | 1459 |
| MlyI | GAGTC | 3 cut(s) | 1172, 1357, 1927 |
| MmeI | TCCRAC | 3 cut(s) | 1025, 1981, 2314 |
| Mph1103I | ATGCAT | 2 cut(s) | 1097, 2051 |
| MroNI | GCCGGC | 1 cut(s) | 1415 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1170, 1310 |
| MseI | TTAA | 5 cut(s) | 462, 672, 1011, 2066, 2377 |
| MslI | CAYNNNNRTG | 4 cut(s) | 594, 787, 894, 1475 |
| MspA1I | CMGCKG | 1 cut(s) | 719 |
| MspI | CCGG | 3 cut(s) | 492, 1416, 2173 |
| MspR9I | CCNGG | 4 cut(s) | 492, 1206, 1431, 1990 |
| Mva1269I | GAATGC | 2 cut(s) | 450, 1710 |
| MvaI | CCWGG | 3 cut(s) | 1206, 1431, 1990 |
| MvnI | CGCG | 1 cut(s) | 2335 |
| NaeI | GCCGGC | 1 cut(s) | 1417 |
| NarI | GGCGCC | 1 cut(s) | 1459 |
| NciI | CCSGG | 1 cut(s) | 492 |
| NcoI | CCATGG | 1 cut(s) | 858 |
| NgoMIV | GCCGGC | 1 cut(s) | 1415 |
| NlaIII | CATG | 8 cut(s) | 789, 862, 1095, 1161, 1474, 1591, 1747, 2146 |
| NlaIV | GGNNCC | 3 cut(s) | 496, 598, 1460 |
| NmuCI | GTSAC | 6 cut(s) | 113, 119, 700, 778, 1390, 1919 |
| NsiI | ATGCAT | 2 cut(s) | 1097, 2051 |
| NspI | RCATGY | 4 cut(s) | 1095, 1474, 1747, 2146 |
| PaeI | GCATGC | 1 cut(s) | 1095 |
| PaeR7I | CTCGAG | 1 cut(s) | 1800 |
| PciI | ACATGT | 1 cut(s) | 2142 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 153, 2133 |
| PctI | GAATGC | 2 cut(s) | 450, 1710 |
| PdiI | GCCGGC | 1 cut(s) | 1417 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1170, 1310 |
| PfeI | GAWTC | 7 cut(s) | 10, 32, 65, 1166, 1724, 2113, 2270 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 752, 864 |
| PfoI | TCCNGGA | 2 cut(s) | 1204, 1429 |
| PleI | GAGTC | 3 cut(s) | 1172, 1356, 1926 |
| PluTI | GGCGCC | 1 cut(s) | 1462 |
| PpsI | GAGTC | 3 cut(s) | 1172, 1356, 1926 |
| PpuMI | RGGWCCY | 1 cut(s) | 578 |
| PscI | ACATGT | 1 cut(s) | 2142 |
| PsiI | TTATAA | 2 cut(s) | 1491, 1628 |
| Psp5II | RGGWCCY | 1 cut(s) | 578 |
| Psp6I | CCWGG | 3 cut(s) | 1204, 1429, 1988 |
| PspFI | CCCAGC | 2 cut(s) | 356, 1528 |
| PspGI | CCWGG | 3 cut(s) | 1204, 1429, 1988 |
| PspN4I | GGNNCC | 3 cut(s) | 496, 598, 1460 |
| PspPI | GGNCC | 1 cut(s) | 578 |
| PspPPI | RGGWCCY | 1 cut(s) | 578 |
| PspXI | VCTCGAGB | 1 cut(s) | 1800 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1175 |
| PsuI | RGATCY | 2 cut(s) | 629, 2095 |
| PvuII | CAGCTG | 1 cut(s) | 719 |
| RsaI | GTAC | 5 cut(s) | 853, 1638, 1692, 2090, 2318 |
| RsaNI | GTAC | 5 cut(s) | 852, 1637, 1691, 2089, 2317 |
| RseI | CAYNNNNRTG | 4 cut(s) | 594, 787, 894, 1475 |
| SaqAI | TTAA | 5 cut(s) | 462, 672, 1011, 2066, 2377 |
| Sau96I | GGNCC | 1 cut(s) | 578 |
| SchI | GAGTC | 3 cut(s) | 1172, 1357, 1927 |
| ScrFI | CCNGG | 4 cut(s) | 492, 1206, 1431, 1990 |
| SduI | GDGCHC | 2 cut(s) | 745, 1345 |
| SfaNI | GCATC | 5 cut(s) | 617, 1104, 1285, 1548, 1654 |
| SfcI | CTRYAG | 1 cut(s) | 1386 |
| SfoI | GGCGCC | 1 cut(s) | 1460 |
| Sfr274I | CTCGAG | 1 cut(s) | 1800 |
| SinI | GGWCC | 1 cut(s) | 578 |
| SlaI | CTCGAG | 1 cut(s) | 1800 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 594, 787, 894, 1475 |
| SmlI | CTYRAG | 1 cut(s) | 1800 |
| SmoI | CTYRAG | 1 cut(s) | 1800 |
| SpeI | ACTAGT | 1 cut(s) | 2300 |
| SphI | GCATGC | 1 cut(s) | 1095 |
| SsiI | CCGC | 6 cut(s) | 662, 828, 1413, 1561, 2335, 2354 |
| SspDI | GGCGCC | 1 cut(s) | 1458 |
| SspMI | CTAG | 3 cut(s) | 654, 2301, 2360 |
| StyD4I | CCNGG | 4 cut(s) | 490, 1204, 1429, 1988 |
| StyI | CCWWGG | 2 cut(s) | 564, 858 |
| TaaI | ACNGT | 6 cut(s) | 113, 119, 1570, 2006, 2295, 2321 |
| TaiI | ACGT | 2 cut(s) | 219, 2130 |
| TatI | WGTACW | 2 cut(s) | 1690, 2088 |
| TauI | GCSGC | 1 cut(s) | 664 |
| TfiI | GAWTC | 7 cut(s) | 10, 32, 65, 1166, 1724, 2113, 2270 |
| Tru1I | TTAA | 5 cut(s) | 462, 672, 1011, 2066, 2377 |
| Tru9I | TTAA | 5 cut(s) | 462, 672, 1011, 2066, 2377 |
| TscAI | CASTG | 4 cut(s) | 1345, 1408, 2286, 2326 |
| TseFI | GTSAC | 6 cut(s) | 113, 119, 700, 778, 1390, 1919 |
| Tsp45I | GTSAC | 6 cut(s) | 113, 119, 700, 778, 1390, 1919 |
| TspDTI | ATGAA | 5 cut(s) | 268, 898, 1530, 1701, 2022 |
| TspGWI | ACGGA | 4 cut(s) | 138, 1259, 1704, 2106 |
| TspRI | CASTG | 4 cut(s) | 1345, 1408, 2286, 2326 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 752, 864 |
| VpaK11BI | GGWCC | 1 cut(s) | 578 |
| XapI | RAATTY | 5 cut(s) | 298, 314, 649, 1228, 1306 |
| XbaI | TCTAGA | 2 cut(s) | 653, 2359 |
| XceI | RCATGY | 4 cut(s) | 1095, 1474, 1747, 2146 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1427, 1880 |
| XhoI | CTCGAG | 1 cut(s) | 1800 |
| XmiI | GTMKAC | 2 cut(s) | 1351, 2160 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1170, 1310 |
| XspI | CTAG | 3 cut(s) | 654, 2301, 2360 |
| Zsp2I | ATGCAT | 2 cut(s) | 1097, 2051 |