Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0003450

Physical Location & Seq

Genomic Coordinates Forward (+)

18702332 .. 18709883

Gene Structure 7552 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g15130.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2385 bp

ATGCTGTCGAATCACTTGCAGAATGGGATCATCGACGCGCCGAAGCTGGCCTGGTCTCGCTTACCGAACTCGGAAGACGCCGAGAACGACGTCGTTGGATTGAGGAAGAAAGGCGACGAAGGCGGCGGCGTCGAGAGCCTTGACTATGAAGTCATCGAGAACTACGCTTATTGGGAAGAGCAGGCGCAGAGAGGGAAGCTTTATGTTGGATATTATGTGGCTGTGAAGTGGTTCTTTGCTTTGCTTATCGGAATCGGTACTGGATTAGCTGCTGTTTTCATCAATATTTCGGTTGAGAACTTTGCAGGCTGGAAATTTGCACTGACATTTGCTATAATACAAAAATCGTATTTTGCCGGTTTCGTGGTGTACGTATTAATCAACTTAGTTTTGGTCTTTTCCTCTGTATATATCATTACACAATTCGCACCGGCAGCAGCTGGGTCTGGTATTCCAGAAATCAAGGGGTATTTAAATGGGGTTGACATACACGGTGTCCTACTGTTCAGAACATTGATCGGAAAGATATTTGGGAGCATTGGTTCAGTGGGAGGTGGTCTAGCTTTAGGCAAAGAAGGTCCTCTTGTTCATACTGGTGCTTGTATTGCTTCGTTGCTTGGACAAGGTGGATCTACAAAATACCATCTCAGGTACAGGTGGCTACAAATTTTTAATAGTGATCGAGATCGCCGTGATCTTGTAACCTGTGGATGTGCAGCTGGAGTCTCTGCTGCTTTCAGAGCTCCTGTTGGTGGTGTACTATTTGCACTGGAAGAAGTTACATCTTGGTGGAGGAGTCAACTTATGTGGCGTGTATTTTTCACTTCTGCAATTGTGGCTGTTGTGGTGCGTACTGCAATGGGATGGTGCAAGAGTGGAAAATGTGGACATTTTGGCTCAGGTGGCTTCATAATATGGGATATATCAGATGGTCAAGAGGACTATTCTTTTGAGGAATTCTTGCCAATGGCGGTTATTGGGGTCATTGGAGGTTTACTGGGAGCCTTGTTTAATCAGCTTACATTTTACATTGCTCACTGGCGCCGAAATTATTTACACAAGAAAGGGAATCGAGTAAAGATAATTGAAGCGTGTCTCATCTCTCTGATAACGTCAATTATTTCCTTTGGTTTACCACTCTTAAGAAAATGTAGTCAATGCCCTGAAGCAGATCCAGATTCTGGTATTGAGTGCCCGCGGCCTCCAGGAACGTATGGAAATTATGTTAATTTTTTTTGCAGCAAGGACAATGAATACAATGATCTTGCAACTATTTTCTTCAATACACAGGATGATGCTATCAGGAATTTGTTTAGTGCAAAAACAATACACGAGTACAGCGCCCAAAGTTTATTGACCTTCTTGGTTATGTTTTATACATTAGCAGTTGTGACATTTGGTACTGCCGTTCCAGCTGGTCAATTTGTTCCTGGAATAATGATAGGATCAACATATGGACGTCTTGTAGGCATGTTTGTTGTCAACTTCTACAAGAAGCTCAACATTGAAGAGGGGACATATGCACTACTCGGGGCAGCTTCTTTTCTTGGAGGTTCAATGCGAATCACAGTGTCTCTATGTGTCATTATGGTTGAAATCACAAATAATCTGAAATTTTTGCCTCTTATCATGCTTGTTCTTCTTATTTCAAAGGCTGTTGGTGATGCATTCAATGAAGGCCTGTATGAAGAACAGTCACGGTTGAGAAGCATTCCGCAATTAGAATCGAAACCCAAATATCAAATGCGGAAGATGACAGCTAAGGAAGCCTGTGGAAAAAGGGTGATCTCCTTCCCTCGTGTTGTGAAGGTTGCAGATTTGGTTTCTATTCTACGGAGCAACATCCATAATGGCTACCCTGTGATTGATCATTCTAGAAATGGAGAAACACTTGTCATTGGACTAATGCTTCGTAGTCACTTGTTGGTACTTCTGCAGTCGAAGGTAGATTTCCAGCATAGCCCTTTGCCATGTGATCCCAGAAATGCTAGGTCTATCAGGCACACTTTGAGCGAGTTTGTTAAACCTGCTTCCAGTAAAGGATTATCTATAAATGATATACATCTGAGCTCAGACGACTTGGAAATGTACATAGATCTCGCCCCCTTTCTAAACCCATCTCCTTACCTCGTCCCTGAGGATATGTCTTTGACAAAGGTATATAATCTTTTCCGTCAGTTAGGTCTGAGACATATACTTGTTGTTCCCCGGCCATCTCGTGTGATTGGTTTGATTACCAGAAAGGATTTATTGATTGAGGAGAATGAGGATTCTGCTTCAATGGAACTCCAATCGACTAGTGTAAGAGCACAACATTGTGATAAGAGAAAGGTCAAGTGGATTGGAGATATGGAGCGCCCGCTACTCACTGGTCTTCTTTCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0008150 GO:0009653 GO:0009826 GO:0009987 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0031984 GO:0032502 GO:0032989 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048589 GO:0048856 GO:0048869 GO:0060560 GO:0071840 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBS Voltage_CLC

Protein Analysis

795

Amino Acids

87.91

Weight (kDa)

8.56

Isoelectric Point (pI)

43.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Voltage_CLC	PF00654	132 - 554	1.8e-85	Voltage gated chloride channel
CBS	PF00571	705 - 751	8.4e-07	CBS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003450)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G26240 AT5G26240
fragaria_vesca	FvH4_4g15130 FvH4_4g15130
malus_domestica	MD13G1188900.v1.1 MD16G1189700.v1.1
prunus_persica	Prupe.1G156000_v2.0.a1 Prupe.1G156000_v2.0.a1 Prupe.1G156000_v2.0.a1 Prupe.1G156000_v2.0.a1 Prupe.1G156000_v2.0.a1 Prupe.1G156000_v2.0.a1 Prupe.1G156000_v2.0.a1
pyrus_communis	pycom13g16330 pycom16g15940
rosa_chinensis	RchiOBHm_Chr3g0497631 RchiOBHm_Chr4g0416741
rosa_laevigata	RLG00000007956 RLG00000023042
rosa_multiflora	Rmu_co8329069.1_g000001 Rmu_sc0023201.1_g000001 Rmu_sc0025051.1_g000001 Rmu_sc0038555.1_g000001
rosa_roxburghii	Rroxscaffold_5G00360610 Rroxscaffold_6G00395290
rosa_rugosa	Rorug04G0144200 Rorug04G0144200 Rorug04G0144200 Rorug04G0144200
rosa_samantha	Rh1BG229600 Rh1CG042200 Rh1DG027400 Rh4AG207000 Rh4BG204200 Rh7CG094800
rosa_wichuraiana	Rw4G017510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	149
AatII	GACGTC	2 cut(s)	93, 1462
Acc36I	ACCTGC	1 cut(s)	2035
AccB1I	GGYRCC	1 cut(s)	1041
AccB7I	CCANNNNNTGG	1 cut(s)	1181
AccII	CGCG	2 cut(s)	38, 1198
AciI	CCGC	8 cut(s)	123, 126, 971, 1196, 1198, 1715, 1747, 2360
AclWI	GGATC	5 cut(s)	35, 637, 1166, 1453, 1970
AcoI	YGGCCR	1 cut(s)	2210
AcsI	RAATTY	5 cut(s)	314, 666, 956, 1306, 1613
AcuI	CTGAAG	1 cut(s)	1185
AcyI	GRCGYC	5 cut(s)	78, 90, 129, 1042, 1459
AfaI	GTAC	9 cut(s)	259, 371, 653, 759, 853, 1337, 1402, 1929, 2090
AfiI	CCNNNNNNNGG	2 cut(s)	752, 1181
AflII	CTTAAG	1 cut(s)	1141
AgsI	TTSAA	8 cut(s)	1088, 1282, 1508, 1557, 1595, 1650, 1672, 2280
AhlI	ACTAGT	1 cut(s)	2297
AjnI	CCWGG	3 cut(s)	50, 1204, 1429
AloI	GAACNNNNNNTCC	2 cut(s)	526, 558
Alw21I	GWGCWC	3 cut(s)	745, 2072, 2311
Alw26I	GTCTC	5 cut(s)	60, 730, 1100, 1578, 2182
AlwI	GGATC	5 cut(s)	35, 637, 1166, 1453, 1970
AlwNI	CAGNNNCTG	2 cut(s)	440, 1181
Ama87I	CYCGRG	1 cut(s)	1529
AoxI	GGCC	4 cut(s)	48, 1199, 1678, 2210
ApeKI	GCWGC	7 cut(s)	269, 434, 437, 716, 731, 1239, 1535
ApoI	RAATTY	5 cut(s)	314, 666, 956, 1306, 1613
ArsI	GACNNNNNNTTYG	4 cut(s)	932, 964, 1893, 1925
AseI	ATTAAT	1 cut(s)	377
Asp700I	GAANNNNTTC	1 cut(s)	230
AspLEI	GCGC	5 cut(s)	40, 187, 1044, 1343, 2358
AspS9I	GGNCC	1 cut(s)	578
AsuC2I	CCSGG	1 cut(s)	2209
AsuHPI	GGTGA	2 cut(s)	1673, 1795
AvaI	CYCGRG	1 cut(s)	1529
AvaII	GGWCC	1 cut(s)	578
AxyI	CCTNAGG	1 cut(s)	2136
BaeGI	GKGCMC	1 cut(s)	1196
BaeI	ACNNNNGTAYC	2 cut(s)	1392, 1425
BanI	GGYRCC	1 cut(s)	1041
BanII	GRGCYC	2 cut(s)	745, 2072
BauI	CACGAG	3 cut(s)	1331, 1797, 2217
BbsI	GAAGAC	2 cut(s)	81, 2366
Bbv12I	GWGCWC	3 cut(s)	745, 2072, 2311
BbvI	GCAGC	7 cut(s)	256, 446, 449, 718, 728, 1251, 1547
BccI	CCATC	5 cut(s)	651, 858, 923, 2125, 2221
BceAI	ACGGC	2 cut(s)	675, 1391
BcgI	CGANNNNNNTGC	1 cut(s)	32
BciT130I	CCWGG	3 cut(s)	52, 1206, 1431
BclI	TGATCA	1 cut(s)	1867
BcnI	CCSGG	1 cut(s)	2209
BcoDI	GTCTC	5 cut(s)	60, 730, 1100, 1578, 2182
BcuI	ACTAGT	1 cut(s)	2297
BfaI	CTAG	4 cut(s)	560, 1875, 1989, 2298
BfmI	CTRYAG	1 cut(s)	1934
BfoI	RGCGCY	3 cut(s)	1045, 1344, 2359
BfrI	CTTAAG	1 cut(s)	1141
BfuAI	ACCTGC	1 cut(s)	2035
BglII	AGATCT	1 cut(s)	2095
Bme1390I	CCNGG	4 cut(s)	52, 1206, 1431, 2209
Bme18I	GGWCC	1 cut(s)	578
BmeT110I	CYCGRG	1 cut(s)	1529
BmgT120I	GGNCC	1 cut(s)	578
BmiI	GGNNCC	2 cut(s)	1003, 1043
BmrFI	CCNGG	4 cut(s)	52, 1206, 1431, 2209
BmrI	ACTGGG	1 cut(s)	1007
BmsI	GCATC	2 cut(s)	1285, 1654
BmuI	ACTGGG	1 cut(s)	1007
BpiI	GAAGAC	2 cut(s)	81, 2366
BpmI	CTGGAG	2 cut(s)	741, 1188
Bpu10I	CCTNAGC	2 cut(s)	898, 1761
BpuMI	CCSGG	1 cut(s)	2209
BsaAI	YACGTR	1 cut(s)	373
BsaBI	GATNNNNATC	2 cut(s)	684, 2061
BsaHI	GRCGYC	5 cut(s)	78, 90, 129, 1042, 1459
BsaI	GGTCTC	1 cut(s)	60
BsaJI	CCNNGG	2 cut(s)	1196, 2207
BsaXI	ACNNNNNCTCC	2 cut(s)	526, 556
Bsc4I	CCNNNNNNNGG	2 cut(s)	752, 1181
Bse118I	RCCGGY	2 cut(s)	356, 430
Bse1I	ACTGG	7 cut(s)	265, 598, 774, 1002, 1043, 2034, 2374
Bse21I	CCTNAGG	1 cut(s)	2136
Bse3DI	GCAATG	2 cut(s)	864, 1029
Bse8I	GATNNNNATC	2 cut(s)	684, 2061
BseBI	CCWGG	3 cut(s)	52, 1206, 1431
BseDI	CCNNGG	2 cut(s)	1196, 2207
BseGI	GGATG	4 cut(s)	716, 869, 1297, 1842
BseJI	GATNNNNATC	2 cut(s)	684, 2061
BseLI	CCNNNNNNNGG	2 cut(s)	752, 1181
BseMI	GCAATG	2 cut(s)	864, 1029
BseMII	CTCAG	6 cut(s)	661, 912, 2057, 2085, 2127, 2177
BseNI	ACTGG	7 cut(s)	265, 598, 774, 1002, 1043, 2034, 2374
BseRI	GAGGAG	2 cut(s)	808, 2273
BseSI	GKGCMC	1 cut(s)	1196
BseXI	GCAGC	7 cut(s)	256, 446, 449, 718, 728, 1251, 1547
BseYI	CCCAGC	1 cut(s)	440
BsgI	GTGCAG	1 cut(s)	735
Bsh1236I	CGCG	2 cut(s)	38, 1198
BshFI	GGCC	4 cut(s)	50, 1201, 1680, 2212
BshNI	GGYRCC	1 cut(s)	1041
BsiHKAI	GWGCWC	3 cut(s)	745, 2072, 2311
BsiHKCI	CYCGRG	1 cut(s)	1529
BsiSI	CCGG	3 cut(s)	357, 431, 2209
BslFI	GGGAC	2 cut(s)	1528, 2117
BslI	CCNNNNNNNGG	2 cut(s)	752, 1181
BsmAI	GTCTC	5 cut(s)	60, 730, 1100, 1578, 2182
BsmFI	GGGAC	2 cut(s)	1528, 2117
BsmI	GAATGC	2 cut(s)	1667, 1710
BsnI	GGCC	4 cut(s)	50, 1201, 1680, 2212
Bso31I	GGTCTC	1 cut(s)	60
BsoBI	CYCGRG	1 cut(s)	1529
Bsp1286I	GDGCHC	4 cut(s)	745, 1196, 2072, 2311
Bsp1407I	TGTACA	1 cut(s)	2088
BspACI	CCGC	8 cut(s)	123, 126, 971, 1196, 1198, 1715, 1747, 2360
BspANI	GGCC	4 cut(s)	50, 1201, 1680, 2212
BspCNI	CTCAG	6 cut(s)	660, 911, 2058, 2084, 2128, 2178
BspFNI	CGCG	2 cut(s)	38, 1198
BspLI	GGNNCC	2 cut(s)	1003, 1043
BspMAI	CTGCAG	1 cut(s)	1938
BspMI	ACCTGC	1 cut(s)	2035
BspPI	GGATC	5 cut(s)	35, 637, 1166, 1453, 1970
BspQI	GCTCTTC	1 cut(s)	171
BspT107I	GGYRCC	1 cut(s)	1041
BspTI	CTTAAG	1 cut(s)	1141
BspTNI	GGTCTC	1 cut(s)	60
BsrDI	GCAATG	2 cut(s)	864, 1029
BsrFI	RCCGGY	2 cut(s)	356, 430
BsrGI	TGTACA	1 cut(s)	2088
BsrI	ACTGG	7 cut(s)	265, 598, 774, 1002, 1043, 2034, 2374
BssAI	RCCGGY	2 cut(s)	356, 430
BssECI	CCNNGG	2 cut(s)	1196, 2207
BssNI	GRCGYC	5 cut(s)	78, 90, 129, 1042, 1459
BssSI	CACGAG	3 cut(s)	1331, 1797, 2217
Bst2BI	CACGAG	3 cut(s)	1331, 1797, 2217
Bst2UI	CCWGG	3 cut(s)	52, 1206, 1431
Bst4CI	ACNGT	5 cut(s)	494, 504, 1570, 1695, 1701
Bst6I	CTCTTC	2 cut(s)	171, 1503
BstACI	GRCGYC	5 cut(s)	78, 90, 129, 1042, 1459
BstAFI	CTTAAG	1 cut(s)	1141
BstAUI	TGTACA	1 cut(s)	2088
BstBAI	YACGTR	1 cut(s)	373
BstC8I	GCNNGC	5 cut(s)	48, 183, 307, 1196, 2360
BstDEI	CTNAG	8 cut(s)	385, 647, 898, 1761, 2066, 2071, 2136, 2186
BstDSI	CCRYGG	1 cut(s)	1196
BstF5I	GGATG	4 cut(s)	716, 869, 1297, 1842
BstFNI	CGCG	2 cut(s)	38, 1198
BstH2I	RGCGCY	3 cut(s)	1045, 1344, 2359
BstHHI	GCGC	5 cut(s)	40, 187, 1044, 1343, 2358
BstMAI	GTCTC	5 cut(s)	60, 730, 1100, 1578, 2182
BstMWI	GCNNNNNNNGC	9 cut(s)	120, 135, 434, 605, 740, 836, 903, 1412, 1766
BstNI	CCWGG	3 cut(s)	52, 1206, 1431
BstNSI	RCATGY	1 cut(s)	1474
BstSCI	CCNGG	4 cut(s)	50, 1204, 1429, 2207
BstSFI	CTRYAG	1 cut(s)	1934
BstSLI	GKGCMC	1 cut(s)	1196
BstSNI	TACGTA	1 cut(s)	373
BstUI	CGCG	2 cut(s)	38, 1198
BstV1I	GCAGC	7 cut(s)	256, 446, 449, 718, 728, 1251, 1547
BstV2I	GAAGAC	2 cut(s)	81, 2366
BstX2I	RGATCY	3 cut(s)	629, 1171, 2095
BstYI	RGATCY	3 cut(s)	629, 1171, 2095
Bsu36I	CCTNAGG	1 cut(s)	2136
BsuRI	GGCC	4 cut(s)	50, 1201, 1680, 2212
BtgI	CCRYGG	1 cut(s)	1196
BtsCI	GGATG	4 cut(s)	716, 869, 1297, 1842
BtsIMutI	CAGTG	6 cut(s)	320, 552, 767, 1036, 1575, 2367
BveI	ACCTGC	1 cut(s)	2035
Cac8I	GCNNGC	5 cut(s)	48, 183, 307, 1196, 2360
CaiI	CAGNNNCTG	2 cut(s)	440, 1181
CfoI	GCGC	5 cut(s)	40, 187, 1044, 1343, 2358
Cfr10I	RCCGGY	2 cut(s)	356, 430
Cfr13I	GGNCC	1 cut(s)	578
Cfr42I	CCGCGG	1 cut(s)	1199
CseI	GACGC	3 cut(s)	44, 86, 118
Csp6I	GTAC	9 cut(s)	258, 370, 652, 758, 852, 1336, 1401, 1928, 2089
CspCI	CAANNNNNGTGG	2 cut(s)	788, 823
CviAII	CATG	3 cut(s)	1471, 1630, 1971
CviQI	GTAC	9 cut(s)	258, 370, 652, 758, 852, 1336, 1401, 1928, 2089
DdeI	CTNAG	8 cut(s)	385, 647, 898, 1761, 2066, 2071, 2136, 2186
DinI	GGCGCC	1 cut(s)	1043
DraI	TTTAAA	1 cut(s)	474
DrdI	GACNNNNNNGTC	1 cut(s)	149
DseDI	GACNNNNNNGTC	1 cut(s)	149
EaeI	YGGCCR	1 cut(s)	2210
Eam1104I	CTCTTC	2 cut(s)	171, 1503
EarI	CTCTTC	2 cut(s)	171, 1503
Ecl136II	GAGCTC	2 cut(s)	743, 2070
Eco105I	TACGTA	1 cut(s)	373
Eco147I	AGGCCT	1 cut(s)	1680
Eco24I	GRGCYC	2 cut(s)	745, 2072
Eco31I	GGTCTC	1 cut(s)	60
Eco47I	GGWCC	1 cut(s)	578
Eco53kI	GAGCTC	2 cut(s)	743, 2070
Eco57I	CTGAAG	1 cut(s)	1185
Eco81I	CCTNAGG	1 cut(s)	2136
Eco88I	CYCGRG	1 cut(s)	1529
EcoICRI	GAGCTC	2 cut(s)	743, 2070
EcoO109I	RGGNCCY	1 cut(s)	578
EcoRI	GAATTC	1 cut(s)	956
EcoRII	CCWGG	3 cut(s)	50, 1204, 1429
EcoT22I	ATGCAT	1 cut(s)	1669
EcoT38I	GRGCYC	2 cut(s)	745, 2072
EgeI	GGCGCC	1 cut(s)	1043
EheI	GGCGCC	1 cut(s)	1043
FaeI	CATG	3 cut(s)	1474, 1633, 1974
FalI	AAGNNNNNCTT	4 cut(s)	218, 250, 567, 599
FaqI	GGGAC	2 cut(s)	1528, 2117
FatI	CATG	3 cut(s)	1470, 1629, 1970
FauI	CCCGC	2 cut(s)	1203, 2367
FauNDI	CATATG	2 cut(s)	1453, 1519
FbaI	TGATCA	1 cut(s)	1867
FokI	GGATG	4 cut(s)	723, 876, 1304, 1829
FriOI	GRGCYC	2 cut(s)	745, 2072
FspBI	CTAG	4 cut(s)	560, 1875, 1989, 2298
GlaI	GCGC	5 cut(s)	39, 186, 1043, 1342, 2357
GsaI	CCCAGC	1 cut(s)	444
GsuI	CTGGAG	2 cut(s)	741, 1188
HaeII	RGCGCY	3 cut(s)	1045, 1344, 2359
HaeIII	GGCC	4 cut(s)	50, 1201, 1680, 2212
HapII	CCGG	3 cut(s)	357, 431, 2209
HgaI	GACGC	3 cut(s)	44, 86, 118
HhaI	GCGC	5 cut(s)	40, 187, 1044, 1343, 2358
Hin1I	GRCGYC	5 cut(s)	78, 90, 129, 1042, 1459
Hin1II	CATG	3 cut(s)	1474, 1633, 1974
Hin6I	GCGC	5 cut(s)	38, 185, 1042, 1341, 2356
HinP1I	GCGC	5 cut(s)	38, 185, 1042, 1341, 2356
HincII	GTYRAC	3 cut(s)	484, 800, 1483
HindII	GTYRAC	3 cut(s)	484, 800, 1483
HindIII	AAGCTT	1 cut(s)	197
HinfI	GANTC	9 cut(s)	10, 252, 723, 796, 1069, 1178, 1563, 1724, 2270
HpaII	CCGG	3 cut(s)	357, 431, 2209
HphI	GGTGA	2 cut(s)	1673, 1795
Hpy166II	GTNNAC	8 cut(s)	370, 484, 758, 800, 887, 995, 1133, 1483
Hpy188III	TCNNGA	9 cut(s)	133, 157, 455, 683, 935, 1175, 1303, 1875, 2382
Hpy8I	GTNNAC	8 cut(s)	370, 484, 758, 800, 887, 995, 1133, 1483
Hpy99I	CGWCG	5 cut(s)	38, 92, 95, 119, 134
HpyAV	CCTTC	7 cut(s)	113, 569, 1369, 1670, 1801, 1801, 1936
HpyCH4III	ACNGT	5 cut(s)	494, 504, 1570, 1695, 1701
HpyCH4IV	ACGT	5 cut(s)	90, 372, 1112, 1211, 1459
HpyF10VI	GCNNNNNNNGC	9 cut(s)	120, 135, 434, 605, 740, 836, 903, 1412, 1766
HpyF3I	CTNAG	8 cut(s)	385, 647, 898, 1761, 2066, 2071, 2136, 2186
HpySE526I	ACGT	5 cut(s)	90, 372, 1112, 1211, 1459
Hsp92I	GRCGYC	5 cut(s)	78, 90, 129, 1042, 1459
Hsp92II	CATG	3 cut(s)	1474, 1633, 1974
HspAI	GCGC	5 cut(s)	38, 185, 1042, 1341, 2356
KasI	GGCGCC	1 cut(s)	1041
Ksp22I	TGATCA	1 cut(s)	1867
KspI	CCGCGG	1 cut(s)	1199
LguI	GCTCTTC	1 cut(s)	171
LmnI	GCTCC	5 cut(s)	534, 748, 1001, 1836, 2353
Lsp1109I	GCAGC	7 cut(s)	256, 446, 449, 718, 728, 1251, 1547
LweI	GCATC	2 cut(s)	1285, 1654
MaeI	CTAG	4 cut(s)	560, 1875, 1989, 2298
MaeII	ACGT	5 cut(s)	90, 372, 1112, 1211, 1459
MaeIII	GTNAC	5 cut(s)	700, 778, 1390, 1695, 1916
MfeI	CAATTG	1 cut(s)	831
MflI	RGATCY	3 cut(s)	629, 1171, 2095
MhlI	GDGCHC	4 cut(s)	745, 1196, 2072, 2311
Mly113I	GGCGCC	1 cut(s)	1042
MlyI	GAGTC	2 cut(s)	732, 805
MmeI	TCCRAC	2 cut(s)	76, 187
Mph1103I	ATGCAT	1 cut(s)	1669
MroXI	GAANNNNTTC	1 cut(s)	230
MseI	TTAA	7 cut(s)	377, 473, 672, 1011, 1142, 1227, 2022
MslI	CAYNNNNRTG	2 cut(s)	594, 787
MspA1I	CMGCKG	4 cut(s)	440, 719, 1198, 1415
MspCI	CTTAAG	1 cut(s)	1141
MspI	CCGG	3 cut(s)	357, 431, 2209
MspR9I	CCNGG	4 cut(s)	52, 1206, 1431, 2209
MunI	CAATTG	1 cut(s)	831
Mva1269I	GAATGC	2 cut(s)	1667, 1710
MvaI	CCWGG	3 cut(s)	52, 1206, 1431
MvnI	CGCG	2 cut(s)	38, 1198
MwoI	GCNNNNNNNGC	9 cut(s)	120, 135, 434, 605, 740, 836, 903, 1412, 1766
NarI	GGCGCC	1 cut(s)	1042
NciI	CCSGG	1 cut(s)	2209
NdeI	CATATG	2 cut(s)	1453, 1519
NlaIII	CATG	3 cut(s)	1474, 1633, 1974
NlaIV	GGNNCC	2 cut(s)	1003, 1043
NmeAIII	GCCGAG	1 cut(s)	106
NmuCI	GTSAC	3 cut(s)	1390, 1695, 1916
NsiI	ATGCAT	1 cut(s)	1669
NspI	RCATGY	1 cut(s)	1474
PceI	AGGCCT	1 cut(s)	1680
PciSI	GCTCTTC	1 cut(s)	171
PcsI	WCGNNNNNNNCGW	3 cut(s)	84, 369, 688
PctI	GAATGC	2 cut(s)	1667, 1710
PdmI	GAANNNNTTC	1 cut(s)	230
PfeI	GAWTC	7 cut(s)	10, 252, 1069, 1178, 1563, 1724, 2270
PflMI	CCANNNNNTGG	1 cut(s)	1181
PfoI	TCCNGGA	2 cut(s)	1204, 1429
PleI	GAGTC	2 cut(s)	731, 804
PluTI	GGCGCC	1 cut(s)	1045
PpsI	GAGTC	2 cut(s)	731, 804
Ppu21I	YACGTR	1 cut(s)	373
PpuMI	RGGWCCY	1 cut(s)	578
PshBI	ATTAAT	1 cut(s)	377
Psp124BI	GAGCTC	2 cut(s)	745, 2072
Psp5II	RGGWCCY	1 cut(s)	578
Psp6I	CCWGG	3 cut(s)	50, 1204, 1429
PspFI	CCCAGC	1 cut(s)	440
PspGI	CCWGG	3 cut(s)	50, 1204, 1429
PspN4I	GGNNCC	2 cut(s)	1003, 1043
PspPI	GGNCC	1 cut(s)	578
PspPPI	RGGWCCY	1 cut(s)	578
PstI	CTGCAG	1 cut(s)	1938
PstNI	CAGNNNCTG	2 cut(s)	440, 1181
PsuI	RGATCY	3 cut(s)	629, 1171, 2095
PvuII	CAGCTG	3 cut(s)	440, 719, 1415
RsaI	GTAC	9 cut(s)	259, 371, 653, 759, 853, 1337, 1402, 1929, 2090
RsaNI	GTAC	9 cut(s)	258, 370, 652, 758, 852, 1336, 1401, 1928, 2089
RseI	CAYNNNNRTG	2 cut(s)	594, 787
SacI	GAGCTC	2 cut(s)	745, 2072
SacII	CCGCGG	1 cut(s)	1199
SapI	GCTCTTC	1 cut(s)	171
SaqAI	TTAA	7 cut(s)	377, 473, 672, 1011, 1142, 1227, 2022
Sau96I	GGNCC	1 cut(s)	578
SchI	GAGTC	2 cut(s)	732, 805
ScrFI	CCNGG	4 cut(s)	52, 1206, 1431, 2209
SduI	GDGCHC	4 cut(s)	745, 1196, 2072, 2311
SfaNI	GCATC	2 cut(s)	1285, 1654
SfcI	CTRYAG	1 cut(s)	1934
SfoI	GGCGCC	1 cut(s)	1043
Sfr303I	CCGCGG	1 cut(s)	1199
SgrBI	CCGCGG	1 cut(s)	1199
SinI	GGWCC	1 cut(s)	578
SmiI	ATTTAAAT	1 cut(s)	474
SmiMI	CAYNNNNRTG	2 cut(s)	594, 787
SmlI	CTYRAG	1 cut(s)	1141
SmoI	CTYRAG	1 cut(s)	1141
SnaBI	TACGTA	1 cut(s)	373
SpeI	ACTAGT	1 cut(s)	2297
SseBI	AGGCCT	1 cut(s)	1680
SsiI	CCGC	8 cut(s)	123, 126, 971, 1196, 1198, 1715, 1747, 2360
SspDI	GGCGCC	1 cut(s)	1041
SspI	AATATT	1 cut(s)	286
SspMI	CTAG	4 cut(s)	560, 1875, 1989, 2298
SstI	GAGCTC	2 cut(s)	745, 2072
StuI	AGGCCT	1 cut(s)	1680
StyD4I	CCNGG	4 cut(s)	50, 1204, 1429, 2207
SwaI	ATTTAAAT	1 cut(s)	474
TaaI	ACNGT	5 cut(s)	494, 504, 1570, 1695, 1701
TaiI	ACGT	5 cut(s)	93, 375, 1115, 1214, 1462
TaqI	TCGA	9 cut(s)	8, 33, 132, 156, 682, 1072, 1727, 1940, 2294
TatI	WGTACW	3 cut(s)	757, 1335, 2088
TauI	GCSGC	3 cut(s)	126, 129, 1201
TfiI	GAWTC	7 cut(s)	10, 252, 1069, 1178, 1563, 1724, 2270
Tru1I	TTAA	7 cut(s)	377, 473, 672, 1011, 1142, 1227, 2022
Tru9I	TTAA	7 cut(s)	377, 473, 672, 1011, 1142, 1227, 2022
TscAI	CASTG	6 cut(s)	327, 552, 774, 1043, 1575, 2374
TseFI	GTSAC	3 cut(s)	1390, 1695, 1916
TseI	GCWGC	7 cut(s)	269, 434, 437, 716, 731, 1239, 1535
Tsp45I	GTSAC	3 cut(s)	1390, 1695, 1916
TspDTI	ATGAA	7 cut(s)	162, 268, 578, 898, 1266, 1689, 1701
TspGWI	ACGGA	2 cut(s)	1849, 2162
TspRI	CASTG	6 cut(s)	327, 552, 774, 1043, 1575, 2374
Van91I	CCANNNNNTGG	1 cut(s)	1181
Vha464I	CTTAAG	1 cut(s)	1141
VpaK11BI	GGWCC	1 cut(s)	578
VspI	ATTAAT	1 cut(s)	377
XapI	RAATTY	5 cut(s)	314, 666, 956, 1306, 1613
XbaI	TCTAGA	1 cut(s)	1874
XceI	RCATGY	1 cut(s)	1474
XmnI	GAANNNNTTC	1 cut(s)	230
XspI	CTAG	4 cut(s)	560, 1875, 1989, 2298
ZraI	GACGTC	2 cut(s)	91, 1460
Zsp2I	ATGCAT	1 cut(s)	1669

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.