AT5G26570

Phosphoglucan, water dikinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
9261479 .. 9267732
6254 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G26570.1

Sequence Viewer

Length: 3591 bp
ATGGAGAGCATTGGCAGCCATTGTTGCAGCTCTCCTTTCACCTTCATCACTAGAAACTCATCATCATCACTTCCTAGACTCGTTAACATCACTCACAGAGTTAATCTCAGCCACCAATCTCACCGACTCAGAAACTCCAATTCTCGTCTCACTTGCACTGCTACTTCTTCTTCCACCATTGAGGAACAACGGAAGAAGAAAGATGGGTCAGGAACGAAAGTGAGGTTGAATGTGAGGTTAGATCATCAAGTTAATTTTGGTGACCATGTGGCTATGTTTGGATCAGCTAAAGAGATTGGTTCATGGAAAAAGAAATCGCCTTTGAATTGGAGTGAGAATGGATGGGTTTGTGAGTTGGAACTTGACGGTGGTCAGGTTTTGGAGTATAAGTTTGTCATTGTTAAGAATGATGGTTCACTTTCATGGGAATCTGGTGATAATCGTGTCCTTAAGGTTCCAAATTCTGGGAATTTTTCTGTTGTTTGTCATTGGGATGCTACTAGAGAAACCCTTGATTTGCCTCAGGAGGTTGGTAATGATGATGATGTTGGTGATGGTGGGCATGAGAGGGATAATCATGATGTTGGTGATGATAGAGTAGTGGGAAGTGAAAATGGTGCGCAGCTTCAGAAGAGTACATTGGGTGGGCAATGGCAAGGTAAAGATGCGTCCTTTATGCGTTCTAATGATCATGGTAACAGAGAAGTTGGTAGAAATTGGGATACTAGTGGTCTTGAAGGCACAGCTCTTAAGATGGTTGAGGGTGATCGCAACTCTAAGAACTGGTGGAGAAAGCTTGAAATGGTACGCGAGGTTATAGTTGGGAGTGTTGAGAGGGAGGAACGATTGAAGGCGCTCATATACTCTGCAATTTATTTGAAGTGGATAAACACAGGTCAGATTCCTTGTTTTGAAGATGGAGGGCATCACCGTCCAAACAGGCATGCCGAGATTTCCAGACTTATATTCCGTGAGTTGGAGCACATTTGCAGTAAGAAAGATGCTACTCCAGAGGAAGTGCTTGTTGCTCGGAAAATCCATCCGTGTTTACCTTCTTTCAAAGCAGAGTTTACTGCAGCTGTCCCTCTAACTCGGATTAGGGACATAGCCCATCGCAATGATATTCCTCATGATCTCAAGCAAGAAATCAAGCATACGATACAAAATAAGCTTCACCGGAATGCTGGTCCAGAAGATCTAATTGCAACAGAAGCAATGCTTCAACGAATTACCGAGACCCCAGGAAAATATAGTGGAGACTTTGTGGAGCAGTTTAAAATATTCCATAATGAGCTTAAAGATTTCTTTAATGCTGGAAGTCTCACTGAACAGCTTGATTCTATGAAAATTTCTATGGATGATAGAGGTCTTTCTGCGCTCAATTTGTTTTTTGAATGTAAAAAGCGCCTTGACACATCAGGAGAATCAAGCAATGTTTTGGAGTTGATTAAAACCATGCATTCTCTAGCTTCTTTAAGAGAAACAATTATAAAGGAACTTAATAGCGGCTTGCGAAATGATGCTCCTGATACTGCCATTGCAATGCGCCAGAAGTGGCGCCTTTGTGAGATCGGCCTCGAGGACTACTTTTTTGTTCTACTAAGCAGATTCCTCAATGCTCTTGAAACTATGGGAGGAGCTGATCAACTGGCAAAAGATGTGGGATCAAGAAACGTTGCCTCATGGAATGATCCACTAGATGCTTTGGTGTTGGGTGTTCACCAAGTAGGTCTATCTGGTTGGAAGCAAGAAGAATGTTTAGCCATTGGAAATGAACTCCTTGCTTGGCGAGAAAGGGACCTACTTGAAAAAGAAGGGGAAGAGGATGGAAAAACAATTTGGGCCATGAGGCTGAAAGCAACTCTTGATCGAGCACGCAGATTAACAGCAGAATATTCTGATTTGCTTCTTCAAATATTTCCTCCTAATGTGGAGATTTTAGGAAAAGCTCTAGGAATTCCAGAGAATAGTGTCAAGACCTATACAGAAGCAGAGATTCGTGCTGGAATTATTTTCCAGATCTCAAAGCTCTGCACTGTTCTTCTAAAAGCTGTAAGAAATTCACTTGGTTCTGAGGGCTGGGATGTCGTTGTACCTGGATCGACGTCTGGGACATTAGTTCAGGTTGAGAGCATTGTTCCGGGATCATTGCCAGCAACTTCTGGTGGTCCTATTATTCTCTTGGTCAATAAAGCTGATGGCGATGAAGAGGTAAGTGCTGCTAATGGGAACATAGCTGGAGTCATGCTTCTGCAGGAGCTGCCTCACTTGTCTCACCTTGGCGTTAGAGCGCGGCAGGAGAAAATTGTCTTTGTGACATGTGATGATGATGACAAGGTTGCTGATATACGACGACTTGTGGGAAAATTTGTGAGGTTGGAAGCATCTCCAAGTCATGTGAATCTGATACTTTCAACTGAGGGTAGGAGTCGCACTTCCAAATCCAGTGCGACCAAAAAAACGGATAAGAACAGCTTATCTAAGAAAAAAACAGATAAGAAGAGCTTATCTATCGATGATGAAGAATCAAAGCCTGGTTCCTCATCTTCCAATAGCCTCCTTTACTCTTCCAAGGATATCCCTAGTGGAGGAATCATAGCACTTGCTGATGCAGATGTACCAACTTCTGGTTCAAAATCTGCTGCATGTGGTCTTCTTGCATCTTTAGCAGAAGCCTCTAGTAAAGTGCACAGCGAACACGGAGTTCCGGCATCATTTAAGGTTCCAACTGGAGTTGTCATACCTTTTGGATCGATGGAATTAGCTTTAAAGCAAAATAATTCGGAAGAAAAGTTTGCGTCTTTGCTAGAAAAACTAGAAACCGCCAGACCTGAGGGTGGTGAGCTAGACGACATATGTGACCAGATCCATGAAGTGATGAAAACGTTGCAAGTGCCTAAAGAAACAATCAACAGCATAAGCAAAGCGTTTCTCAAAGATGCTCGTCTCATTGTTCGTTCAAGTGCTAACGTCGAGGACTTAGCCGGAATGTCAGCTGCAGGACTCTATGAATCAATCCCTAACGTGAGTCCCTCGGATCCTTTGGTGTTTTCAGATTCGGTTTGCCAAGTTTGGGCTTCTCTCTACACAAGAAGAGCTGTTCTAAGCCGTAGAGCTGCTGGTGTCTCTCAAAGAGAAGCTTCAATGGCTGTTCTCGTTCAAGAAATGCTTTCGCCGGACTTATCATTCGTTCTGCACACAGTGAGTCCAGCTGATCCGGACAGTAACCTTGTGGAAGCCGAGATCGCTCCTGGTTTAGGTGAGACTTTAGCTTCAGGAACAAGAGGAACACCATGGAGACTCGCTTCGGGTAAGCTCGACGGGATTGTACAAACCTTAGCTTTCGCAAACTTCAGCGAAGAGCTTCTTGTGTCAGGAACAGGTCCTGCTGATGGAAAATACGTTCGGTTGACCGTGGACTATAGCAAAAAACGTTTAACTGTTGACTCGGTGTTTAGACAGCAGCTCGGTCAGAGACTCGGTTCGGTTGGTTTCTTCTTGGAAAGAAACTTTGGCTGTGCTCAAGACGTTGAAGGTTGTTTGGTTGGTGAAGATGTTTACATTGTTCAGTCAAGGCCACAACCTCTGTAG

Protein Analysis

1196

Amino Acids

131.32

Weight (kDa)

5.86

Isoelectric Point (pI)

36.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CBM_20 PF00686 73 - 158 3.9e-16 Starch binding domain
GWD1_pHisD PF22973 694 - 802 8.3e-31 Alpha-glucan water dikinase, phosphohistidine-like domain
PPDK_N PF01326 901 - 1194 2e-33 Pyruvate phosphate dikinase, AMP/ATP-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1490
AatII GACGTC 1 cut(s) 2108
AbsI CCTCGAGG 1 cut(s) 1577
Acc16I TGCGCA 1 cut(s) 621
AccB1I GGYRCC 1 cut(s) 1557
AccB7I CCANNNNNTGG 2 cut(s) 464, 2627
AccII CGCG 2 cut(s) 810, 2293
AccIII TCCGGA 1 cut(s) 3217
AciI CCGC 3 cut(s) 1506, 2293, 2823
AclI AACGTT 3 cut(s) 1674, 2885, 3433
AcsI RAATTY 6 cut(s) 460, 469, 1347, 1956, 2059, 2366
AcuI CTGAAG 3 cut(s) 611, 3258, 3337
AcyI GRCGYC 2 cut(s) 1558, 2105
AdeI CACNNNGTG 1 cut(s) 3202
AfaI GTAC 5 cut(s) 637, 807, 2094, 2619, 3330
AfiI CCNNNNNNNGG 8 cut(s) 464, 976, 2588, 2627, 2837, 3073, 3257, 3392
AflII CTTAAG 2 cut(s) 449, 749
AflIII ACRYGT 1 cut(s) 2318
AhlI ACTAGT 1 cut(s) 725
AjnI CCWGG 4 cut(s) 1240, 2095, 2533, 3250
AjuI GAANNNNNNNTTGG 8 cut(s) 623, 655, 1822, 1854, 2614, 2646, 3495, 3527
AloI GAACNNNNNNTCC 2 cut(s) 3387, 3419
Alw21I GWGCWC 4 cut(s) 984, 1876, 2691, 3523
Alw44I GTGCAC 1 cut(s) 2687
AlwNI CAGNNNCTG 2 cut(s) 2260, 3386
Ama87I CYCGRG 1 cut(s) 1577
Aor13HI TCCGGA 1 cut(s) 3217
AoxI GGCC 3 cut(s) 1573, 1842, 3575
ApaLI GTGCAC 1 cut(s) 2687
ApoI RAATTY 6 cut(s) 460, 469, 1347, 1956, 2059, 2366
ArsI GACNNNNNNTTYG 4 cut(s) 1574, 1606, 3170, 3202
Asp700I GAANNNNTTC 1 cut(s) 3363
AspLEI GCGC 7 cut(s) 622, 856, 1378, 1407, 1548, 1560, 2293
AspS9I GGNCC 5 cut(s) 1187, 1798, 1842, 2168, 3383
AsuC2I CCSGG 1 cut(s) 2142
AvaI CYCGRG 1 cut(s) 1577
AvaII GGWCC 4 cut(s) 1187, 1798, 2168, 3383
AxyI CCTNAGG 2 cut(s) 522, 2832
BaeGI GKGCMC 1 cut(s) 2691
BamHI GGATCC 1 cut(s) 3037
BanI GGYRCC 1 cut(s) 1557
BbsI GAAGAC 1 cut(s) 2645
Bbv12I GWGCWC 4 cut(s) 984, 1876, 2691, 3523
BceAI ACGGC 1 cut(s) 3093
BciT130I CCWGG 4 cut(s) 1242, 2097, 2535, 3252
BciVI GTATCC 1 cut(s) 715
BclI TGATCA 2 cut(s) 688, 1642
BcnI CCSGG 1 cut(s) 2142
BcuI ACTAGT 1 cut(s) 725
BfmI CTRYAG 5 cut(s) 1074, 2252, 2997, 3421, 3587
BfoI RGCGCY 3 cut(s) 857, 1408, 1561
BfrI CTTAAG 2 cut(s) 449, 749
BfuI GTATCC 1 cut(s) 715
BglII AGATCT 2 cut(s) 1195, 2019
Bme1390I CCNGG 5 cut(s) 1242, 2097, 2142, 2535, 3252
Bme18I GGWCC 4 cut(s) 1187, 1798, 2168, 3383
BmeT110I CYCGRG 1 cut(s) 1577
BmgT120I GGNCC 5 cut(s) 1187, 1798, 1842, 2168, 3383
BmiI GGNNCC 6 cut(s) 456, 1559, 1799, 2539, 2724, 3039
BmrFI CCNGG 5 cut(s) 1242, 2097, 2142, 2535, 3252
BoxI GACNNNNGTC 1 cut(s) 369
BpiI GAAGAC 1 cut(s) 2645
BplI GAGNNNNNCTC 2 cut(s) 90, 122
BpmI CTGGAG 3 cut(s) 993, 2259, 2751
Bpu10I CCTNAGC 1 cut(s) 3337
BpuEI CTTGAG 2 cut(s) 1121, 3507
BpuMI CCSGG 1 cut(s) 2142
Bsa29I ATCGAT 2 cut(s) 2514, 2753
BsaHI GRCGYC 2 cut(s) 1558, 2105
BsaI GGTCTC 1 cut(s) 1229
BsaJI CCNNGG 6 cut(s) 1240, 2278, 2571, 3033, 3293, 3414
BsaWI WCCGGW 2 cut(s) 1176, 3217
BsaXI ACNNNNNCTCC 4 cut(s) 374, 404, 1248, 1278
Bsc4I CCNNNNNNNGG 8 cut(s) 464, 976, 2588, 2627, 2837, 3073, 3257, 3392
Bse1I ACTGG 4 cut(s) 788, 1653, 2445, 2734
Bse21I CCTNAGG 2 cut(s) 522, 2832
Bse3DI GCAATG 7 cut(s) 656, 1123, 1221, 1438, 1536, 1548, 2147
BseAI TCCGGA 1 cut(s) 3217
BseBI CCWGG 4 cut(s) 1242, 2097, 2535, 3252
BseCI ATCGAT 2 cut(s) 2514, 2753
BseDI CCNNGG 6 cut(s) 1240, 2278, 2571, 3033, 3293, 3414
BseGI GGATG 6 cut(s) 347, 499, 1039, 1363, 1831, 2089
BseLI CCNNNNNNNGG 8 cut(s) 464, 976, 2588, 2627, 2837, 3073, 3257, 3392
BseMI GCAATG 7 cut(s) 656, 1123, 1221, 1438, 1536, 1548, 2147
BseMII CTCAG 6 cut(s) 121, 142, 536, 2064, 2409, 2823
BseNI ACTGG 4 cut(s) 788, 1653, 2445, 2734
BseRI GAGGAG 1 cut(s) 1650
BseSI GKGCMC 1 cut(s) 2691
BseYI CCCAGC 1 cut(s) 2079
BsgI GTGCAG 2 cut(s) 2017, 3179
Bsh1236I CGCG 2 cut(s) 810, 2293
BshFI GGCC 3 cut(s) 1575, 1844, 3577
BshNI GGYRCC 1 cut(s) 1557
BshVI ATCGAT 2 cut(s) 2514, 2753
BsiHKAI GWGCWC 4 cut(s) 984, 1876, 2691, 3523
BsiHKCI CYCGRG 1 cut(s) 1577
BsiSI CCGG 6 cut(s) 1177, 2141, 2708, 2985, 3176, 3218
BslFI GGGAC 5 cut(s) 1067, 1115, 1811, 2125, 3015
BslI CCNNNNNNNGG 8 cut(s) 464, 976, 2588, 2627, 2837, 3073, 3257, 3392
BsmBI CGTCTC 2 cut(s) 152, 2951
BsmFI GGGAC 5 cut(s) 1067, 1115, 1811, 2125, 3015
BsmI GAATGC 2 cut(s) 1186, 1459
BsnI GGCC 3 cut(s) 1575, 1844, 3577
Bso31I GGTCTC 1 cut(s) 1229
BsoBI CYCGRG 1 cut(s) 1577
Bsp1286I GDGCHC 4 cut(s) 984, 1876, 2691, 3523
Bsp13I TCCGGA 1 cut(s) 3217
Bsp1407I TGTACA 1 cut(s) 3328
Bsp19I CCATGG 1 cut(s) 3293
BspACI CCGC 3 cut(s) 1506, 2293, 2823
BspANI GGCC 3 cut(s) 1575, 1844, 3577
BspCNI CTCAG 6 cut(s) 120, 141, 535, 2065, 2410, 2824
BspDI ATCGAT 2 cut(s) 2514, 2753
BspEI TCCGGA 1 cut(s) 3217
BspFNI CGCG 2 cut(s) 810, 2293
BspHI TCATGA 2 cut(s) 577, 1129
BspLI GGNNCC 6 cut(s) 456, 1559, 1799, 2539, 2724, 3039
BspMAI CTGCAG 3 cut(s) 1078, 2256, 3001
BspQI GCTCTTC 3 cut(s) 2495, 3088, 3354
BspT107I GGYRCC 1 cut(s) 1557
BspTI CTTAAG 2 cut(s) 449, 749
BspTNI GGTCTC 1 cut(s) 1229
BsrDI GCAATG 7 cut(s) 656, 1123, 1221, 1438, 1536, 1548, 2147
BsrGI TGTACA 1 cut(s) 3328
BsrI ACTGG 4 cut(s) 788, 1653, 2445, 2734
BssECI CCNNGG 6 cut(s) 1240, 2278, 2571, 3033, 3293, 3414
BssNI GRCGYC 2 cut(s) 1558, 2105
BssT1I CCWWGG 3 cut(s) 2278, 2571, 3293
Bst2UI CCWGG 4 cut(s) 1242, 2097, 2535, 3252
Bst4CI ACNGT 7 cut(s) 368, 932, 2038, 3202, 3224, 3415, 3442
Bst6I CTCTTC 7 cut(s) 626, 1815, 2202, 2495, 2572, 3088, 3354
BstACI GRCGYC 2 cut(s) 1558, 2105
BstAFI CTTAAG 2 cut(s) 449, 749
BstAPI GCANNNNNTGC 1 cut(s) 2260
BstAUI TGTACA 1 cut(s) 3328
BstC8I GCNNGC 4 cut(s) 945, 1511, 1876, 2154
BstDSI CCRYGG 2 cut(s) 3293, 3414
BstEII GGTNACC 1 cut(s) 260
BstENI CCTNNNNNAGG 2 cut(s) 2586, 3255
BstF5I GGATG 6 cut(s) 347, 499, 1039, 1363, 1831, 2089
BstFNI CGCG 2 cut(s) 810, 2293
BstH2I RGCGCY 3 cut(s) 857, 1408, 1561
BstHHI GCGC 7 cut(s) 622, 856, 1378, 1407, 1548, 1560, 2293
BstMWI GCNNNNNNNGC 7 cut(s) 15, 24, 1211, 2260, 2666, 3146, 3245
BstNI CCWGG 4 cut(s) 1242, 2097, 2535, 3252
BstNSI RCATGY 3 cut(s) 947, 2322, 2649
BstPAI GACNNNNGTC 1 cut(s) 369
BstPI GGTNACC 1 cut(s) 260
BstSCI CCNGG 5 cut(s) 1240, 2095, 2140, 2533, 3250
BstSFI CTRYAG 5 cut(s) 1074, 2252, 2997, 3421, 3587
BstSLI GKGCMC 1 cut(s) 2691
BstUI CGCG 2 cut(s) 810, 2293
BstV2I GAAGAC 1 cut(s) 2645
BstX2I RGATCY 4 cut(s) 1195, 2019, 2865, 3037
BstYI RGATCY 4 cut(s) 1195, 2019, 2865, 3037
Bsu15I ATCGAT 2 cut(s) 2514, 2753
Bsu36I CCTNAGG 2 cut(s) 522, 2832
BsuI GTATCC 1 cut(s) 715
BsuRI GGCC 3 cut(s) 1575, 1844, 3577
BsuTUI ATCGAT 2 cut(s) 2514, 2753
BtgI CCRYGG 2 cut(s) 3293, 3414
BtgZI GCGATG 2 cut(s) 1097, 2217
BtsCI GGATG 6 cut(s) 347, 499, 1039, 1363, 1831, 2089
BtsI GCAGTG 1 cut(s) 156
BtsIMutI CAGTG 5 cut(s) 156, 1323, 2034, 2452, 3207
Cac8I GCNNGC 4 cut(s) 945, 1511, 1876, 2154
CaiI CAGNNNCTG 2 cut(s) 2260, 3386
CciI TCATGA 2 cut(s) 577, 1129
CfoI GCGC 7 cut(s) 622, 856, 1378, 1407, 1548, 1560, 2293
Cfr13I GGNCC 5 cut(s) 1187, 1798, 1842, 2168, 3383
ClaI ATCGAT 2 cut(s) 2514, 2753
CseI GACGC 2 cut(s) 657, 2787
Csp6I GTAC 5 cut(s) 636, 806, 2093, 2618, 3329
CspCI CAANNNNNGTGG 2 cut(s) 1641, 1676
CviQI GTAC 5 cut(s) 636, 806, 2093, 2618, 3329
DinI GGCGCC 1 cut(s) 1559
DraI TTTAAA 2 cut(s) 1276, 2769
DraIII CACNNNGTG 1 cut(s) 3202
Eam1104I CTCTTC 7 cut(s) 626, 1815, 2202, 2495, 2572, 3088, 3354
EarI CTCTTC 7 cut(s) 626, 1815, 2202, 2495, 2572, 3088, 3354
Eco130I CCWWGG 3 cut(s) 2278, 2571, 3293
Eco31I GGTCTC 1 cut(s) 1229
Eco32I GATATC 1 cut(s) 2578
Eco47I GGWCC 4 cut(s) 1187, 1798, 2168, 3383
Eco57I CTGAAG 3 cut(s) 611, 3258, 3337
Eco81I CCTNAGG 2 cut(s) 522, 2832
Eco88I CYCGRG 1 cut(s) 1577
Eco91I GGTNACC 1 cut(s) 260
EcoNI CCTNNNNNAGG 2 cut(s) 2586, 3255
EcoO109I RGGNCCY 2 cut(s) 1798, 3383
EcoO65I GGTNACC 1 cut(s) 260
EcoRI GAATTC 1 cut(s) 1956
EcoRII CCWGG 4 cut(s) 1240, 2095, 2533, 3250
EcoRV GATATC 1 cut(s) 2578
EcoT14I CCWWGG 3 cut(s) 2278, 2571, 3293
EcoT22I ATGCAT 1 cut(s) 1461
EgeI GGCGCC 1 cut(s) 1559
EheI GGCGCC 1 cut(s) 1559
ErhI CCWWGG 3 cut(s) 2278, 2571, 3293
Esp3I CGTCTC 2 cut(s) 152, 2951
FaqI GGGAC 5 cut(s) 1067, 1115, 1811, 2125, 3015
FauNDI CATATG 1 cut(s) 2855
FbaI TGATCA 2 cut(s) 688, 1642
FokI GGATG 6 cut(s) 354, 506, 1026, 1370, 1838, 2096
FspI TGCGCA 1 cut(s) 621
GlaI GCGC 7 cut(s) 621, 855, 1377, 1406, 1547, 1559, 2292
GsaI CCCAGC 1 cut(s) 2083
GsuI CTGGAG 3 cut(s) 993, 2259, 2751
HaeII RGCGCY 3 cut(s) 857, 1408, 1561
HaeIII GGCC 3 cut(s) 1575, 1844, 3577
HapII CCGG 6 cut(s) 1177, 2141, 2708, 2985, 3176, 3218
HgaI GACGC 2 cut(s) 657, 2787
HhaI GCGC 7 cut(s) 622, 856, 1378, 1407, 1548, 1560, 2293
Hin1I GRCGYC 2 cut(s) 1558, 2105
Hin6I GCGC 7 cut(s) 620, 854, 1376, 1405, 1546, 1558, 2291
HinP1I GCGC 7 cut(s) 620, 854, 1376, 1405, 1546, 1558, 2291
HincII GTYRAC 3 cut(s) 85, 3411, 3445
HindII GTYRAC 3 cut(s) 85, 3411, 3445
HindIII AAGCTT 3 cut(s) 794, 1169, 3138
HpaI GTTAAC 1 cut(s) 85
HpaII CCGG 6 cut(s) 1177, 2141, 2708, 2985, 3176, 3218
Hpy99I CGWCG 4 cut(s) 2107, 2355, 2975, 3323
HpyAV CCTTC 6 cut(s) 52, 731, 844, 1062, 1808, 3527
HpyCH4III ACNGT 7 cut(s) 368, 932, 2038, 3202, 3224, 3415, 3442
HpyCH4IV ACGT 8 cut(s) 1674, 2105, 2885, 2970, 3024, 3402, 3433, 3528
HpyF10VI GCNNNNNNNGC 7 cut(s) 15, 24, 1211, 2260, 2666, 3146, 3245
HpySE526I ACGT 8 cut(s) 1674, 2105, 2885, 2970, 3024, 3402, 3433, 3528
Hsp92I GRCGYC 2 cut(s) 1558, 2105
HspAI GCGC 7 cut(s) 620, 854, 1376, 1405, 1546, 1558, 2291
KasI GGCGCC 1 cut(s) 1557
Kpn2I TCCGGA 1 cut(s) 3217
Ksp22I TGATCA 2 cut(s) 688, 1642
KspAI GTTAAC 1 cut(s) 85
LguI GCTCTTC 3 cut(s) 2495, 3088, 3354
LmnI GCTCC 6 cut(s) 979, 1267, 1528, 1637, 2257, 3253
MaeII ACGT 8 cut(s) 1674, 2105, 2885, 2970, 3024, 3402, 3433, 3528
MaeIII GTNAC 5 cut(s) 260, 695, 2314, 2858, 3224
MflI RGATCY 4 cut(s) 1195, 2019, 2865, 3037
MhlI GDGCHC 4 cut(s) 984, 1876, 2691, 3523
Mly113I GGCGCC 1 cut(s) 1558
MmeI TCCRAC 5 cut(s) 336, 957, 1721, 2358, 2750
Mph1103I ATGCAT 1 cut(s) 1461
MroI TCCGGA 1 cut(s) 3217
MroXI GAANNNNTTC 1 cut(s) 3363
MslI CAYNNNNRTG 5 cut(s) 421, 492, 1116, 1179, 1541
MspA1I CMGCKG 3 cut(s) 1079, 2996, 3212
MspCI CTTAAG 2 cut(s) 449, 749
MspI CCGG 6 cut(s) 1177, 2141, 2708, 2985, 3176, 3218
MspR9I CCNGG 5 cut(s) 1242, 2097, 2142, 2535, 3252
Mva1269I GAATGC 2 cut(s) 1186, 1459
MvaI CCWGG 4 cut(s) 1242, 2097, 2535, 3252
MvnI CGCG 2 cut(s) 810, 2293
MwoI GCNNNNNNNGC 7 cut(s) 15, 24, 1211, 2260, 2666, 3146, 3245
NarI GGCGCC 1 cut(s) 1558
NciI CCSGG 1 cut(s) 2142
NcoI CCATGG 1 cut(s) 3293
NdeI CATATG 1 cut(s) 2855
NlaIV GGNNCC 6 cut(s) 456, 1559, 1799, 2539, 2724, 3039
NmeAIII GCCGAG 2 cut(s) 973, 3265
NmuCI GTSAC 3 cut(s) 260, 2314, 2858
NsbI TGCGCA 1 cut(s) 621
NsiI ATGCAT 1 cut(s) 1461
NspI RCATGY 3 cut(s) 947, 2322, 2649
PaeI GCATGC 1 cut(s) 947
PaeR7I CTCGAG 1 cut(s) 1577
PagI TCATGA 2 cut(s) 577, 1129
PciI ACATGT 1 cut(s) 2318
PciSI GCTCTTC 3 cut(s) 2495, 3088, 3354
PctI GAATGC 2 cut(s) 1186, 1459
PdmI GAANNNNTTC 1 cut(s) 3363
PflMI CCANNNNNTGG 2 cut(s) 464, 2627
PfoI TCCNGGA 1 cut(s) 2140
PluTI GGCGCC 1 cut(s) 1561
PpuMI RGGWCCY 2 cut(s) 1798, 3383
PscI ACATGT 1 cut(s) 2318
PshAI GACNNNNGTC 1 cut(s) 369
PsiI TTATAA 1 cut(s) 1490
Psp1406I AACGTT 3 cut(s) 1674, 2885, 3433
Psp5II RGGWCCY 2 cut(s) 1798, 3383
Psp6I CCWGG 4 cut(s) 1240, 2095, 2533, 3250
PspEI GGTNACC 1 cut(s) 260
PspFI CCCAGC 1 cut(s) 2079
PspGI CCWGG 4 cut(s) 1240, 2095, 2533, 3250
PspN4I GGNNCC 6 cut(s) 456, 1559, 1799, 2539, 2724, 3039
PspPI GGNCC 5 cut(s) 1187, 1798, 1842, 2168, 3383
PspPPI RGGWCCY 2 cut(s) 1798, 3383
PspXI VCTCGAGB 1 cut(s) 1577
PstI CTGCAG 3 cut(s) 1078, 2256, 3001
PstNI CAGNNNCTG 2 cut(s) 2260, 3386
PsuI RGATCY 4 cut(s) 1195, 2019, 2865, 3037
PvuII CAGCTG 3 cut(s) 1079, 2996, 3212
RsaI GTAC 5 cut(s) 637, 807, 2094, 2619, 3330
RsaNI GTAC 5 cut(s) 636, 806, 2093, 2618, 3329
RseI CAYNNNNRTG 5 cut(s) 421, 492, 1116, 1179, 1541
SapI GCTCTTC 3 cut(s) 2495, 3088, 3354
Sau96I GGNCC 5 cut(s) 1187, 1798, 1842, 2168, 3383
ScrFI CCNGG 5 cut(s) 1242, 2097, 2142, 2535, 3252
SduI GDGCHC 4 cut(s) 984, 1876, 2691, 3523
SfcI CTRYAG 5 cut(s) 1074, 2252, 2997, 3421, 3587
SfoI GGCGCC 1 cut(s) 1559
Sfr274I CTCGAG 1 cut(s) 1577
SinI GGWCC 4 cut(s) 1187, 1798, 2168, 3383
SlaI CTCGAG 1 cut(s) 1577
SmiMI CAYNNNNRTG 5 cut(s) 421, 492, 1116, 1179, 1541
SmlI CTYRAG 5 cut(s) 449, 749, 1136, 1577, 3522
SmoI CTYRAG 5 cut(s) 449, 749, 1136, 1577, 3522
SpeI ACTAGT 1 cut(s) 725
SphI GCATGC 1 cut(s) 947
SsiI CCGC 3 cut(s) 1506, 2293, 2823
SspDI GGCGCC 1 cut(s) 1557
SspI AATATT 3 cut(s) 1281, 1895, 1917
StyD4I CCNGG 5 cut(s) 1240, 2095, 2140, 2533, 3250
StyI CCWWGG 3 cut(s) 2278, 2571, 3293
TaaI ACNGT 7 cut(s) 368, 932, 2038, 3202, 3224, 3415, 3442
TaiI ACGT 8 cut(s) 1677, 2108, 2888, 2973, 3027, 3405, 3436, 3531
TaqI TCGA 7 cut(s) 1578, 1870, 2102, 2514, 2753, 2973, 3318
TaqII GACCGA 1 cut(s) 3458
TatI WGTACW 2 cut(s) 635, 3328
TauI GCSGC 2 cut(s) 1509, 2296
TscAI CASTG 5 cut(s) 163, 1330, 2041, 2452, 3207
TseFI GTSAC 3 cut(s) 260, 2314, 2858
Tsp45I GTSAC 3 cut(s) 260, 2314, 2858
TspGWI ACGGA 5 cut(s) 205, 959, 1032, 2477, 2715
TspRI CASTG 5 cut(s) 163, 1330, 2041, 2452, 3207
Van91I CCANNNNNTGG 2 cut(s) 464, 2627
Vha464I CTTAAG 2 cut(s) 449, 749
VneI GTGCAC 1 cut(s) 2687
VpaK11BI GGWCC 4 cut(s) 1187, 1798, 2168, 3383
XagI CCTNNNNNAGG 2 cut(s) 2586, 3255
XapI RAATTY 6 cut(s) 460, 469, 1347, 1956, 2059, 2366
XceI RCATGY 3 cut(s) 947, 2322, 2649
XhoI CTCGAG 1 cut(s) 1577
XmnI GAANNNNTTC 1 cut(s) 3363
ZraI GACGTC 1 cut(s) 2106
Zsp2I ATGCAT 1 cut(s) 1461
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.