Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0008467

Physical Location & Seq

Genomic Coordinates Reverse (-)

29584387 .. 29597919

Gene Structure 13533 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000008368

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1935 bp

ATGGAGGTCATCATCGACCAAACTGGTATGCTGAGATTTCCAGGGTCATATTTCGAGAACTGGAAAGAATTTCCTGCAGGAAAGATACTTCACCCCAGGTCGGAAATACTTGTTATTCGTAAAATTCATCCCTGTCTGCCATCTTTCAAGGCAGAGTTTACTGCATCTGTCCCCTTAACACGAATCAGGGACATTGCTCATCGGAATGATATCCCTCATGACCTTAAGGGTTTGGATGCTTCAGCAGAATCAAGTAAAGTTCTGGGATCTGATTTGTTGTTCAAGACCATGCAATCCTTGAGTGCTCCGAGAGAAATAATTGCGAAGAGAGAAATAATTGCGAAGGGTCTTGAAAGTGGCCTTAGAAATGATGCCTCTGATGCTTCAATACCTATGCGCCAAAAGTGGCATCTTTGCGAGATTGGACTTGAGGTCTATTCATTCATTCTTCTAAGCAGATTGGCTAATGAGCTTGAAGCTATGGGAGGGGCTCATTGGCTGGAACAAGATGTGAAATCAAAGGATCTAAGTTCTTGGAATGATCCACTTGGTGCCCTTATAGTTGGTGTTCATCAGCTAAGGTTATCTCGTTGGAAGCCTGAAGAATGTGCTGCTATTGAAAACGAGCTCCTTGCCTGGAAATCAAGAGCGAGTGAAGATGGCAAAATAATCTGGGGACTACGGCATAAAGCTACTCTCGATAGAGCCAGGAGGTTAACTGAAGAATATTCTGAAGCACTTCTTCAAATATTTCCCCAAAATGTCCAGGTATTAGGAAGAGCTTTTGGAATACCTGAGAACAGTTTGAGGACATACGCTGAAGCTGAAATTCGCGCTGGTGTTGATGATATAGAGACACTATCGTTGTCTGACTTTCGACCTACAAATGCTATGCAGTGTAACATTTCAGGTTTCAAAATTGAGTCCCTACTTTTGAAAGCAGTTAGAACTACCCTTGGTTCTCAGGGTTGGGATGTTATTGTGCCGGGAGCTGCTATGGGAACATTAGTTCAGGTTGAGAGGATTGTCCCTGGATCAATACAATCAACTGTGGAGGGACCTGTTGTTCTCGTTGTCAACAAAACAGATGGAGATGAAGAGCGGCTGGGAATAACATTGTGGGAGTTGTTCTTCTGGCTTCCTGATCACTTGTCTCATCTTGGTGTCAGGGCTCGACAAGAGAAGGTTGTGTTCGTGACATGTGAAGACGATGACAAAGTTGCTGATATACAAAAACATAAGGGAAAATTTATGAGACTCACTCTTGCTTTCCTCCCTTTCCCAGGCAATGCACGGCTAATTGTTCGTTCAAGTGCTAATGTTGAAGACTTGGCTGGAATGTCTGCTGCTGGACTATATGATTCAATTTCCAATGGTAGTGTTTCAAATCCGACAGTATTTGCAAATTCTATAAGCAAAGTGTGGGCTTCACTTTACACTTGGAGGGCAGTTTTGAGCCGTCGAGTTGCCGGTGTACTCCAGAAGGATGCTACAATGGCAATTCTGGTGCAAGAAATGCTTTCACCAGACTTATCGTTTGTGCTTCTTACAGTCAGCCCAACAGACCAAGACCATAATTTGGTTGAGGCTGAAATTGCTTCTGGCCTTGGTGAAACTTTGGTTTCAGGCACCAGGGGCACACCCTGGCGTATATCGTCTGGAAAATTTGAAGGGAATGTGCTAATGTTGTCATTTGCTAATTTCAGTGAGGAACTACTTGGTGCGGGCCCTGCGGACGGGGAGGTTATCGATTTGACTGTAGACTACAGCAAGAAACCATTAACTGTTGATCCAGTTTTCCGTCGGCAGCTTGGTCAGCGCCTCGGTGCAGTGGCATTTTTCCTTGAGCAGAAGTTTGGCTGCCCACAGGATGTGGAAGGATGTGTTGTTGGCAAAGACATCTTTATAGTCCAGACACGTCCACAGCCTCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0005983 GO:0006073 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009251 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016052 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016781 GO:0019200 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044267 GO:0044275 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046777 GO:0046835 GO:0051752 GO:0071704 GO:1901564 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBM_20 PPDK_N

Protein Analysis

645

Amino Acids

71.18

Weight (kDa)

5.7

Isoelectric Point (pI)

40.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GWD1_pHisD	PF22973	324 - 422	9.4e-27	Alpha-glucan water dikinase, phosphohistidine-like domain
PPDK_N	PF01326	431 - 642	6.5e-28	Pyruvate phosphate dikinase, AMP/ATP-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008467)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G26570 AT5G26570
fragaria_vesca	FvH4_4g12510 FvH4_4g12510
malus_domestica	MD04G1025900.v1.1
prunus_persica	Prupe.1G175200_v2.0.a1
pyrus_communis	pycom04g02200
rosa_chinensis	RchiOBHm_Chr4g0411251 RchiOBHm_Chr4g0411331
rosa_laevigata	RLG00000008365 RLG00000008368
rosa_multiflora	Rmu_sc0000543.1_g000027 Rmu_sc0000543.1_g000049
rosa_roxburghii	Rroxscaffold_5G00355910
rosa_rugosa	Rorug04G0110100
rosa_samantha	Rh4AG167100 Rh4BG163600 Rh4BG164200 Rh4CG178800 Rh4DG161900
rosa_wichuraiana	Rw4G013760 Rw4G013810 Rw4G013910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	551, 1628
AccB7I	CCANNNNNTGG	1 cut(s)	1579
AccBSI	CCGCTC	1 cut(s)	1102
AccI	GTMKAC	1 cut(s)	1761
AccII	CGCG	1 cut(s)	834
AciI	CCGC	3 cut(s)	1102, 1724, 1733
AclWI	GGATC	5 cut(s)	274, 531, 536, 1042, 1784
AcsI	RAATTY	6 cut(s)	68, 123, 828, 1247, 1405, 1664
AcuI	CTGAAG	5 cut(s)	225, 621, 741, 753, 840
AdeI	CACNNNGTG	1 cut(s)	551
AfaI	GTAC	1 cut(s)	1476
AfiI	CCNNNNNNNGG	4 cut(s)	100, 1283, 1579, 1736
AflII	CTTAAG	1 cut(s)	224
AflIII	ACRYGT	2 cut(s)	1199, 1916
AhdI	GACNNNNNGTC	1 cut(s)	431
AjiI	CACGTC	1 cut(s)	1919
AjnI	CCWGG	9 cut(s)	40, 95, 635, 707, 765, 1030, 1282, 1631, 1643
AloI	GAACNNNNNNTCC	4 cut(s)	993, 1025, 1050, 1082
AluBI	AGCT	9 cut(s)	472, 479, 577, 628, 692, 782, 824, 992, 1810
AluI	AGCT	9 cut(s)	472, 479, 577, 628, 692, 782, 824, 992, 1810
Alw21I	GWGCWC	2 cut(s)	307, 630
Alw26I	GTCTC	3 cut(s)	848, 1158, 1249
AlwI	GGATC	5 cut(s)	274, 531, 536, 1042, 1784
AoxI	GGCC	3 cut(s)	358, 1603, 1726
ApaI	GGGCCC	1 cut(s)	1730
ApeKI	GCWGC	5 cut(s)	611, 992, 1346, 1807, 1860
ApoI	RAATTY	6 cut(s)	68, 123, 828, 1247, 1405, 1664
ArsI	GACNNNNNNTTYG	2 cut(s)	1520, 1552
Asp700I	GAANNNNTTC	1 cut(s)	738
AspLEI	GCGC	3 cut(s)	399, 836, 1821
AspS9I	GGNCC	3 cut(s)	1058, 1726, 1727
AsuC2I	CCSGG	1 cut(s)	987
AsuHPI	GGTGA	3 cut(s)	83, 1515, 1622
AvaII	GGWCC	1 cut(s)	1058
BaeGI	GKGCMC	3 cut(s)	556, 1640, 1730
BanI	GGYRCC	2 cut(s)	551, 1628
BanII	GRGCYC	4 cut(s)	493, 630, 1174, 1730
BbsI	GAAGAC	2 cut(s)	1212, 1332
Bbv12I	GWGCWC	2 cut(s)	307, 630
BbvI	GCAGC	5 cut(s)	598, 979, 1333, 1819, 1847
BccI	CCATC	3 cut(s)	148, 653, 1082
BceAI	ACGGC	3 cut(s)	698, 1310, 1443
BcgI	CGANNNNNNTGC	2 cut(s)	614, 648
BciT130I	CCWGG	9 cut(s)	42, 97, 637, 709, 767, 1032, 1284, 1633, 1645
BclI	TGATCA	1 cut(s)	1144
BcnI	CCSGG	1 cut(s)	987
BcoDI	GTCTC	3 cut(s)	848, 1158, 1249
BfmI	CTRYAG	3 cut(s)	75, 1758, 1765
BfoI	RGCGCY	1 cut(s)	1822
BfrI	CTTAAG	1 cut(s)	224
BisI	GCNGC	6 cut(s)	612, 993, 1103, 1347, 1808, 1861
BlsI	GCNGC	6 cut(s)	613, 994, 1104, 1348, 1809, 1862
Bme18I	GGWCC	1 cut(s)	1058
BmeRI	GACNNNNNGTC	1 cut(s)	431
BmgBI	CACGTC	1 cut(s)	1919
BmgT120I	GGNCC	3 cut(s)	1058, 1726, 1727
BmiI	GGNNCC	4 cut(s)	553, 1059, 1630, 1728
BmsI	GCATC	6 cut(s)	173, 226, 361, 370, 418, 1477
BpiI	GAAGAC	2 cut(s)	1212, 1332
BplI	GAGNNNNNCTC	2 cut(s)	1246, 1278
BpmI	CTGGAG	1 cut(s)	1463
Bpu10I	CCTNAGC	1 cut(s)	578
BpuEI	CTTGAG	3 cut(s)	319, 449, 1865
BpuMI	CCSGG	1 cut(s)	987
Bsa29I	ATCGAT	1 cut(s)	1749
BsaJI	CCNNGG	9 cut(s)	41, 95, 955, 1030, 1282, 1606, 1632, 1643, 1822
Bsc4I	CCNNNNNNNGG	4 cut(s)	100, 1283, 1579, 1736
Bse118I	RCCGGY	1 cut(s)	1469
Bse1I	ACTGG	3 cut(s)	28, 65, 1793
Bse3DI	GCAATG	2 cut(s)	192, 1294
BseBI	CCWGG	9 cut(s)	42, 97, 637, 709, 767, 1032, 1284, 1633, 1645
BseCI	ATCGAT	1 cut(s)	1749
BseDI	CCNNGG	9 cut(s)	41, 95, 955, 1030, 1282, 1606, 1632, 1643, 1822
BseGI	GGATG	6 cut(s)	127, 241, 979, 1492, 1876, 1886
BseLI	CCNNNNNNNGG	4 cut(s)	100, 1283, 1579, 1736
BseMI	GCAATG	2 cut(s)	192, 1294
BseMII	CTCAG	3 cut(s)	23, 786, 977
BseNI	ACTGG	3 cut(s)	28, 65, 1793
BseSI	GKGCMC	3 cut(s)	556, 1640, 1730
BseXI	GCAGC	5 cut(s)	598, 979, 1333, 1819, 1847
BseYI	CCCAGC	1 cut(s)	1105
BsgI	GTGCAG	1 cut(s)	1848
Bsh1236I	CGCG	1 cut(s)	834
BshFI	GGCC	3 cut(s)	360, 1605, 1728
BshNI	GGYRCC	2 cut(s)	551, 1628
BshVI	ATCGAT	1 cut(s)	1749
BsiHKAI	GWGCWC	2 cut(s)	307, 630
BsiSI	CCGG	2 cut(s)	986, 1470
BslFI	GGGAC	6 cut(s)	155, 203, 690, 910, 1013, 1071
BslI	CCNNNNNNNGG	4 cut(s)	100, 1283, 1579, 1736
BsmAI	GTCTC	3 cut(s)	848, 1158, 1249
BsmFI	GGGAC	6 cut(s)	155, 203, 690, 910, 1013, 1071
BsnI	GGCC	3 cut(s)	360, 1605, 1728
Bsp120I	GGGCCC	1 cut(s)	1726
Bsp1286I	GDGCHC	7 cut(s)	307, 493, 556, 630, 1174, 1640, 1730
Bsp143I	GATC	6 cut(s)	266, 523, 541, 1034, 1144, 1789
BspACI	CCGC	3 cut(s)	1102, 1724, 1733
BspANI	GGCC	3 cut(s)	360, 1605, 1728
BspCNI	CTCAG	3 cut(s)	24, 787, 976
BspDI	ATCGAT	1 cut(s)	1749
BspFNI	CGCG	1 cut(s)	834
BspHI	TCATGA	1 cut(s)	217
BspLI	GGNNCC	4 cut(s)	553, 1059, 1630, 1728
BspMAI	CTGCAG	1 cut(s)	79
BspPI	GGATC	5 cut(s)	274, 531, 536, 1042, 1784
BspQI	GCTCTTC	2 cut(s)	772, 1092
BspT107I	GGYRCC	2 cut(s)	551, 1628
BspTI	CTTAAG	1 cut(s)	224
BsrBI	CCGCTC	1 cut(s)	1102
BsrDI	GCAATG	2 cut(s)	192, 1294
BsrFI	RCCGGY	1 cut(s)	1469
BsrI	ACTGG	3 cut(s)	28, 65, 1793
BssAI	RCCGGY	1 cut(s)	1469
BssECI	CCNNGG	9 cut(s)	41, 95, 955, 1030, 1282, 1606, 1632, 1643, 1822
BssMI	GATC	6 cut(s)	266, 523, 541, 1034, 1144, 1789
BssT1I	CCWWGG	2 cut(s)	955, 1606
Bst2UI	CCWGG	9 cut(s)	42, 97, 637, 709, 767, 1032, 1284, 1633, 1645
Bst4CI	ACNGT	6 cut(s)	803, 1051, 1396, 1552, 1759, 1786
Bst6I	CTCTTC	3 cut(s)	320, 772, 1092
BstAFI	CTTAAG	1 cut(s)	224
BstAPI	GCANNNNNTGC	1 cut(s)	1516
BstC8I	GCNNGC	1 cut(s)	1726
BstDEI	CTNAG	7 cut(s)	32, 362, 452, 527, 578, 795, 963
BstENI	CCTNNNNNAGG	1 cut(s)	1281
BstF5I	GGATG	6 cut(s)	127, 241, 979, 1492, 1876, 1886
BstFNI	CGCG	1 cut(s)	834
BstH2I	RGCGCY	1 cut(s)	1822
BstHHI	GCGC	3 cut(s)	399, 836, 1821
BstKTI	GATC	6 cut(s)	269, 526, 544, 1037, 1147, 1792
BstMAI	GTCTC	3 cut(s)	848, 1158, 1249
BstMBI	GATC	6 cut(s)	266, 523, 541, 1034, 1144, 1789
BstMWI	GCNNNNNNNGC	7 cut(s)	380, 1496, 1516, 1595, 1635, 1730, 1816
BstNI	CCWGG	9 cut(s)	42, 97, 637, 709, 767, 1032, 1284, 1633, 1645
BstNSI	RCATGY	1 cut(s)	1203
BstSFI	CTRYAG	3 cut(s)	75, 1758, 1765
BstSLI	GKGCMC	3 cut(s)	556, 1640, 1730
BstUI	CGCG	1 cut(s)	834
BstV1I	GCAGC	5 cut(s)	598, 979, 1333, 1819, 1847
BstV2I	GAAGAC	2 cut(s)	1212, 1332
BstX2I	RGATCY	2 cut(s)	266, 523
BstYI	RGATCY	2 cut(s)	266, 523
Bsu15I	ATCGAT	1 cut(s)	1749
BsuRI	GGCC	3 cut(s)	360, 1605, 1728
BsuTUI	ATCGAT	1 cut(s)	1749
BtrI	CACGTC	1 cut(s)	1919
BtsCI	GGATG	6 cut(s)	127, 241, 979, 1492, 1876, 1886
BtsI	GCAGTG	2 cut(s)	902, 1836
BtsIMutI	CAGTG	3 cut(s)	902, 1711, 1836
Cac8I	GCNNGC	1 cut(s)	1726
CciI	TCATGA	1 cut(s)	217
CfoI	GCGC	3 cut(s)	399, 836, 1821
Cfr10I	RCCGGY	1 cut(s)	1469
Cfr13I	GGNCC	3 cut(s)	1058, 1726, 1727
ClaI	ATCGAT	1 cut(s)	1749
Csp6I	GTAC	1 cut(s)	1475
CviAII	CATG	3 cut(s)	218, 289, 1200
CviQI	GTAC	1 cut(s)	1475
DdeI	CTNAG	7 cut(s)	32, 362, 452, 527, 578, 795, 963
DpnI	GATC	6 cut(s)	268, 525, 543, 1036, 1146, 1791
DpnII	GATC	6 cut(s)	266, 523, 541, 1034, 1144, 1789
DraIII	CACNNNGTG	1 cut(s)	551
DriI	GACNNNNNGTC	1 cut(s)	431
Eam1104I	CTCTTC	3 cut(s)	320, 772, 1092
Eam1105I	GACNNNNNGTC	1 cut(s)	431
EarI	CTCTTC	3 cut(s)	320, 772, 1092
Ecl136II	GAGCTC	1 cut(s)	628
Eco130I	CCWWGG	2 cut(s)	955, 1606
Eco24I	GRGCYC	4 cut(s)	493, 630, 1174, 1730
Eco32I	GATATC	1 cut(s)	211
Eco47I	GGWCC	1 cut(s)	1058
Eco53kI	GAGCTC	1 cut(s)	628
Eco57I	CTGAAG	5 cut(s)	225, 621, 741, 753, 840
EcoICRI	GAGCTC	1 cut(s)	628
EcoNI	CCTNNNNNAGG	1 cut(s)	1281
EcoO109I	RGGNCCY	2 cut(s)	1058, 1727
EcoRII	CCWGG	9 cut(s)	40, 95, 635, 707, 765, 1030, 1282, 1631, 1643
EcoRV	GATATC	1 cut(s)	211
EcoT14I	CCWWGG	2 cut(s)	955, 1606
EcoT38I	GRGCYC	4 cut(s)	493, 630, 1174, 1730
ErhI	CCWWGG	2 cut(s)	955, 1606
FaeI	CATG	3 cut(s)	221, 292, 1203
FalI	AAGNNNNNCTT	4 cut(s)	726, 758, 1503, 1535
FaqI	GGGAC	6 cut(s)	155, 203, 690, 910, 1013, 1071
FatI	CATG	3 cut(s)	217, 288, 1199
FauI	CCCGC	1 cut(s)	1717
FbaI	TGATCA	1 cut(s)	1144
FblI	GTMKAC	1 cut(s)	1761
Fnu4HI	GCNGC	6 cut(s)	612, 993, 1103, 1347, 1808, 1861
FokI	GGATG	6 cut(s)	114, 248, 986, 1499, 1883, 1893
FriOI	GRGCYC	4 cut(s)	493, 630, 1174, 1730
Fsp4HI	GCNGC	6 cut(s)	612, 993, 1103, 1347, 1808, 1861
GlaI	GCGC	3 cut(s)	398, 835, 1820
GluI	GCNGC	6 cut(s)	612, 993, 1103, 1347, 1808, 1861
GsaI	CCCAGC	1 cut(s)	1109
GsuI	CTGGAG	1 cut(s)	1463
HaeII	RGCGCY	1 cut(s)	1822
HaeIII	GGCC	3 cut(s)	360, 1605, 1728
HapII	CCGG	2 cut(s)	986, 1470
HhaI	GCGC	3 cut(s)	399, 836, 1821
Hin1II	CATG	3 cut(s)	221, 292, 1203
Hin6I	GCGC	3 cut(s)	397, 834, 1819
HinP1I	GCGC	3 cut(s)	397, 834, 1819
HincII	GTYRAC	2 cut(s)	717, 1078
HindII	GTYRAC	2 cut(s)	717, 1078
HinfI	GANTC	5 cut(s)	183, 248, 923, 1257, 1361
HpaI	GTTAAC	1 cut(s)	717
HpaII	CCGG	2 cut(s)	986, 1470
HphI	GGTGA	3 cut(s)	83, 1515, 1622
Hpy166II	GTNNAC	6 cut(s)	159, 717, 1078, 1475, 1762, 1922
Hpy188I	TCNGA	8 cut(s)	103, 204, 271, 309, 379, 733, 871, 1392
Hpy8I	GTNNAC	6 cut(s)	159, 717, 1078, 1475, 1762, 1922
Hpy99I	CGWCG	2 cut(s)	1464, 1806
HpyAV	CCTTC	5 cut(s)	337, 1177, 1477, 1664, 1871
HpyCH4III	ACNGT	6 cut(s)	803, 1051, 1396, 1552, 1759, 1786
HpyCH4IV	ACGT	1 cut(s)	1918
HpyCH4V	TGCA	8 cut(s)	77, 164, 292, 895, 1292, 1403, 1510, 1829
HpyF10VI	GCNNNNNNNGC	7 cut(s)	380, 1496, 1516, 1595, 1635, 1730, 1816
HpyF3I	CTNAG	7 cut(s)	32, 362, 452, 527, 578, 795, 963
HpySE526I	ACGT	1 cut(s)	1918
Hsp92II	CATG	3 cut(s)	221, 292, 1203
HspAI	GCGC	3 cut(s)	397, 834, 1819
Ksp22I	TGATCA	1 cut(s)	1144
KspAI	GTTAAC	1 cut(s)	717
Kzo9I	GATC	6 cut(s)	266, 523, 541, 1034, 1144, 1789
LguI	GCTCTTC	2 cut(s)	772, 1092
LmnI	GCTCC	3 cut(s)	310, 633, 989
Lsp1109I	GCAGC	5 cut(s)	598, 979, 1333, 1819, 1847
LweI	GCATC	6 cut(s)	173, 226, 361, 370, 418, 1477
MaeII	ACGT	1 cut(s)	1918
MaeIII	GTNAC	2 cut(s)	899, 1195
MalI	GATC	6 cut(s)	268, 525, 543, 1036, 1146, 1791
MbiI	CCGCTC	1 cut(s)	1102
MboI	GATC	6 cut(s)	266, 523, 541, 1034, 1144, 1789
MflI	RGATCY	2 cut(s)	266, 523
MhlI	GDGCHC	7 cut(s)	307, 493, 556, 630, 1174, 1640, 1730
MlyI	GAGTC	2 cut(s)	932, 1251
MmeI	TCCRAC	3 cut(s)	81, 572, 1415
MroXI	GAANNNNTTC	1 cut(s)	738
MseI	TTAA	4 cut(s)	176, 225, 716, 1781
MslI	CAYNNNNRTG	2 cut(s)	204, 1161
MspCI	CTTAAG	1 cut(s)	224
MspI	CCGG	2 cut(s)	986, 1470
MvaI	CCWGG	9 cut(s)	42, 97, 637, 709, 767, 1032, 1284, 1633, 1645
MvnI	CGCG	1 cut(s)	834
MwoI	GCNNNNNNNGC	7 cut(s)	380, 1496, 1516, 1595, 1635, 1730, 1816
NciI	CCSGG	1 cut(s)	987
NdeII	GATC	6 cut(s)	266, 523, 541, 1034, 1144, 1789
NlaIII	CATG	3 cut(s)	221, 292, 1203
NlaIV	GGNNCC	4 cut(s)	553, 1059, 1630, 1728
NmuCI	GTSAC	1 cut(s)	1195
NspI	RCATGY	1 cut(s)	1203
PagI	TCATGA	1 cut(s)	217
PciI	ACATGT	1 cut(s)	1199
PciSI	GCTCTTC	2 cut(s)	772, 1092
PdmI	GAANNNNTTC	1 cut(s)	738
PfeI	GAWTC	3 cut(s)	183, 248, 1361
PflMI	CCANNNNNTGG	1 cut(s)	1579
PkrI	GCNGC	6 cut(s)	613, 994, 1104, 1348, 1809, 1862
PleI	GAGTC	2 cut(s)	931, 1251
PpsI	GAGTC	2 cut(s)	931, 1251
PpuMI	RGGWCCY	1 cut(s)	1058
PscI	ACATGT	1 cut(s)	1199
Psp124BI	GAGCTC	1 cut(s)	630
Psp5II	RGGWCCY	1 cut(s)	1058
Psp6I	CCWGG	9 cut(s)	40, 95, 635, 707, 765, 1030, 1282, 1631, 1643
PspFI	CCCAGC	1 cut(s)	1105
PspGI	CCWGG	9 cut(s)	40, 95, 635, 707, 765, 1030, 1282, 1631, 1643
PspN4I	GGNNCC	4 cut(s)	553, 1059, 1630, 1728
PspOMI	GGGCCC	1 cut(s)	1726
PspPI	GGNCC	3 cut(s)	1058, 1726, 1727
PspPPI	RGGWCCY	1 cut(s)	1058
PstI	CTGCAG	1 cut(s)	79
PsuI	RGATCY	2 cut(s)	266, 523
RsaI	GTAC	1 cut(s)	1476
RsaNI	GTAC	1 cut(s)	1475
RseI	CAYNNNNRTG	2 cut(s)	204, 1161
SacI	GAGCTC	1 cut(s)	630
SapI	GCTCTTC	2 cut(s)	772, 1092
SaqAI	TTAA	4 cut(s)	176, 225, 716, 1781
SatI	GCNGC	6 cut(s)	612, 993, 1103, 1347, 1808, 1861
Sau3AI	GATC	6 cut(s)	266, 523, 541, 1034, 1144, 1789
Sau96I	GGNCC	3 cut(s)	1058, 1726, 1727
SbfI	CCTGCAGG	1 cut(s)	79
SchI	GAGTC	2 cut(s)	932, 1251
SdaI	CCTGCAGG	1 cut(s)	79
SduI	GDGCHC	7 cut(s)	307, 493, 556, 630, 1174, 1640, 1730
SfaNI	GCATC	6 cut(s)	173, 226, 361, 370, 418, 1477
SfcI	CTRYAG	3 cut(s)	75, 1758, 1765
SinI	GGWCC	1 cut(s)	1058
SmiMI	CAYNNNNRTG	2 cut(s)	204, 1161
SmlI	CTYRAG	4 cut(s)	224, 298, 428, 1844
SmoI	CTYRAG	4 cut(s)	224, 298, 428, 1844
Sse8387I	CCTGCAGG	1 cut(s)	79
SsiI	CCGC	3 cut(s)	1102, 1724, 1733
SspI	AATATT	2 cut(s)	728, 750
SstI	GAGCTC	1 cut(s)	630
StyI	CCWWGG	2 cut(s)	955, 1606
TaaI	ACNGT	6 cut(s)	803, 1051, 1396, 1552, 1759, 1786
TaiI	ACGT	1 cut(s)	1921
TaqI	TCGA	7 cut(s)	15, 54, 699, 877, 1174, 1462, 1749
TatI	WGTACW	1 cut(s)	1474
TauI	GCSGC	1 cut(s)	1105
TfiI	GAWTC	3 cut(s)	183, 248, 1361
Tru1I	TTAA	4 cut(s)	176, 225, 716, 1781
Tru9I	TTAA	4 cut(s)	176, 225, 716, 1781
TscAI	CASTG	3 cut(s)	902, 1711, 1836
TseFI	GTSAC	1 cut(s)	1195
TseI	GCWGC	5 cut(s)	611, 992, 1346, 1807, 1860
Tsp45I	GTSAC	1 cut(s)	1195
TspDTI	ATGAA	5 cut(s)	116, 429, 433, 560, 1110
TspGWI	ACGGA	1 cut(s)	1790
TspRI	CASTG	3 cut(s)	902, 1711, 1836
Van91I	CCANNNNNTGG	1 cut(s)	1579
Vha464I	CTTAAG	1 cut(s)	224
VpaK11BI	GGWCC	1 cut(s)	1058
XagI	CCTNNNNNAGG	1 cut(s)	1281
XapI	RAATTY	6 cut(s)	68, 123, 828, 1247, 1405, 1664
XceI	RCATGY	1 cut(s)	1203
XmiI	GTMKAC	1 cut(s)	1761
XmnI	GAANNNNTTC	1 cut(s)	738

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.