RchiOBHm_Chr4g0411331

Phosphoglucan, water dikinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
35201554 .. 35212029
10476 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ38215

Sequence Viewer

Length: 3579 bp
ATGGATTGCGTGCCTTCGCTGCACACCTCCGCTTCTTCTTCTTCACAGTTCCTCCGTCACAAGCAATTCAGATTCCTCCACAATCACCTTCAATGCCGTCGAAGCGTTGCGGCACTCGGCCGTACAACAAGTTTCCGTCCTCTCCGTCACAAATCAAACAATCTTCGCATTCTCTGCGGCGTCGGTGTTTCTCCTCCTCAATCCACAGAGGAGCAGAAGGAGACCAAGATGAAGTCCAAGTCAAAGTCTGGGCGCGGCAAGGTTTGGCTTGATATTAGGTTGGATCACCAAGTTGCGTTTGGAGAGAGTGTTGCGGTTTTGGGATCATCAAAGGAGTTAGGGTCGTGGAAGAAGAAGGTGCCTCTGAATTGGACAGAGAGTGGATGGGTATGCAAATTGGAGTTCAAGGGTGGTGAGTCCGTTGAGTTTAAGTTTGTAACTGTTAGGGCTGACAAGAGTATGCTTTGGGAAGGTGATGATAACCGGGTTTTGAAACTTCCCAACGGAGGAAGCTTTGGGATGGTTTGCCACTGGAATGCAACTGGGGAGAATGTAGATCTATTCCCATTGGACAAGGAGGATGGTGTTGAATATAAGGGGTCTTCTGCTGCCCAAACTGCTAATACAACTGCTAGTTCTCCCGATGTGGAGACTAGTCCTTTTGTTGGTCAATGGAAAGGGAATGCCATCTCATTTATGCGGTCAAATGAGCATCGGGATCGTGAATCAGGAAGAAATTGGGACACTTCAGGTCTTGAAGGGTTGTCTCTGAAGTTGGTTGAAGGTGATCGAAATGCCAGGAATTGGTGGCAAAAGCTTGAAGTTGTACGTGATATACTACTTGAAAGTTCGCAAAGTGAGGAGCGGTTGGATGCTCTCATAAATTCTTCCATTTATTTGAAGTGGATAAACACAGGCCAGATTCCTTGCTTTGAAGGTGGAGGTCATCATCGACCAAACCGGCATGCTGAGATTTCCAGGGTTATATTTCGAGAACTGGAAAGAATTTCCTGTAGGAAAGATACTTCACCCCAGGAAGTACTTGTTATCCGCAAAATTCATCCATGTCTGCCATCGTTCAAAGCAGAATTTACTGCATCTGTCCCCCTAACACGAATCAGAGACATTGCTCATCGGAATGATATCCCTCATGACCTCAAGCAAGAAATTAAGCACACAATACAAAACAAACTTCACCGCAATGCTGGTCCTGAAGATCTAGTTGCTACAGAAGCCATGCTAGCAAGAATAACCAAGAACCCTGGACAATATAGTGAAGCATTTGTGGAGCAGTTCAAGATATTCCATCATGAGCTCAAAGACTTTTTCAATGCTGGAAGCCTTGCTGAACAACTTGAATCCATCAAAGATTCCATCGATGATAAAGGTCGTTCAGCTCTTACATTGTTTTTGGAGTGCAAAAAGGGTTTGGATGCTTCAGCAGAATCAAGTAAAGTTTTGGGGTCTGATTTGTTGTTCAAGACCATGCAATCCTTGAGTGCTCTGAGAGATATAATTGCAAAGGGTCTTGAAAGTGGCCTTAGAAATGATGCTTCTGATGCTGCTATAGCTATGCGTCAAAAGTGGCGTCTTTGCGAGATTGGACTTGAGGACTATTCATTCATCCTTCTAAGCAGATTCGCTAATGAGCTTGAAGCTATGGGAGGGGCTCATTGGCTGGCACAAGATGTGAAATCAAAGGATGTAAGCTCTTGGAATGATCCACTTGGTGCTCTTGTAGTTGGTGTTCATCAGCTAAGGTTATCTGGTTGGAAGCCTGAAGAATGTGCGGCTATTCAAAACGAGCTCCTTGCCTGGAAAGCAAGAGGTCTTTCTCAAACAGAAGCGAGTGAAGATGGCAAAACAATCTGGGGACTACGGCATAAAGCTACTCTCGATAGAGCCAGGAGGTTAACTGAAGAATATTCTGAAGCACTTCTTCAAATATTTCCCCAAAATGTCCAGGTATTAGGAAAAGCTTTTGGAATACCTGAGAACAGTGTAAGGACATACGCTGAAGCTGAAATTCGCGCTGGTGTAATATTTCAGGTTTCAAAACTCTGTTCCCTGCTTTTGAAAGCAGTTAGAACTACCATTGGTTCTCAGGGTTGGGATGTTATTGTGCCGGGAGCTGCTATGGGAACATTGGTTCAGGTTGAGAGGATTGTCCCCGGTTCAATACCATCAACTGTTGAGGGACCTGTTGTTCTCGTTGTCAACAAAGCAGATGGAGATGAAGAGGTAACAGCGGCTGGGAGTAACATTGTGGGAGTTGTTCTTCTGCAAGAGCTTCCTCACTTGTCTCATCTTGGTGTCAGGGCTCGACAAGAGAAGGTTGTGTTTGTGACATGTGAAGATGATGACAAAGTTGCTGATATACAAAAACTCATGGGAAAATATGTGAGGTTAGAAGCATCCTCGTCCAGTGTTGATATATATCCTTCAACAGAAAACAGCAATGGCACTTTTGCAGTGAAAAATGTTTCAAGTGATGTTGCACCAAAAGTTGAATCCCGTGGAACTCCTGACCCTTCCTGGTCTGCTGCTAAAACCCCAGAATCCAATAAGGGGGTATCTGCCGGTGGAGTTTTACTACTTGCTGATGCAGAAGCACGGAATTCGGGTGCAAAAGCTGCTGCTTGTGGTCGTTTAGCTTCTTTGGCAGCGGCATCTGATAAAGTTTTTAGTGACCAAGGGGTACCAGCTTCCTTTAATGTCCCTGCTGGAGCAGTTATACCATTTGGCTCTATGGAACTGGCATTAGAGCAAAGCAAATCCATGGAATCATTCAGGTCCTTTCTAAATATGATAGAAACATTGAAGCCAGAAAGTGGAGAACTTGACCAAGTATGTGGTCAGCTCCAGGAACTGATCTCTTCTCTACAGCCCTCCAAAGATATCATTGATAGAATAGCCAAAATATTTCCAGGCAATGCGCGGCTAATTGTTCGTTCAAGTGCTAATGTTGAGGACTTAGCTGGAATGTCGGCTGCTGGACTATATGATTCAATTCCCAATGTTAGTGTTTCAAATCCGACAGTATTTGCAAATTCTATAAGCAAAGTGTGGGCATCACTTTATACTAGGAGGGCAGTTTTGAGCCGTCGAGTTGCCGGTGTACCTCAGAAGGATGCTACAATGGCAATTCTGGTGCAAGAAATGCTTTCACCAGACTTATCGTTTGTGCTTCATACAGTCAGCCCAACAGACCAAGACCATAATTTGGTTGAGGCTGAAATTGCTTCTGGCCTCGGTGAAACTTTGGCTTCAGGCACCAGGGGCACACCCTGGCGTATATCGTCTGGAAAATTTGATGGGAATGTGCGCACATTGGCATTTGCTAATTTCAGTGAGGAACTACTTGGTGGAGGCCCTGCAGACGGGGAGGTTATCCATTTGACTGTAGACTACAGCAAGAAACCATTAACTGTTGATCCAGTTTTCCGTCGGCAGCTTGGTCAGCGCCTCGGTGCGGTGGGATTTTTCCTTGAGCAGAAGTTCGGCTGCCCACAGGATGTGGAAGGATGTGTTGTTGGCAAAGACATCTTTATAGTCCAGACACGTCCACAGCCCCTATAA

Protein Analysis

1192

Amino Acids

130.45

Weight (kDa)

6.55

Isoelectric Point (pI)

40.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CBM_20 PF00686 94 - 170 2.3e-14 Starch binding domain
GWD1_pHisD PF22973 704 - 817 2.5e-34 Alpha-glucan water dikinase, phosphohistidine-like domain
PPDK_N PF01326 903 - 1190 1.9e-30 Pyruvate phosphate dikinase, AMP/ATP-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 3326
Acc65I GGTACC 1 cut(s) 2698
AccB1I GGYRCC 3 cut(s) 358, 2698, 3272
AccB7I CCANNNNNTGG 3 cut(s) 804, 2831, 3223
AccBSI CCGCTC 1 cut(s) 865
AccI GTMKAC 1 cut(s) 3405
AccII CGCG 3 cut(s) 255, 2031, 2938
AclWI GGATC 5 cut(s) 291, 331, 726, 1715, 3428
AcoI YGGCCR 1 cut(s) 118
AcsI RAATTY 8 cut(s) 883, 1005, 1056, 1088, 2025, 2617, 3049, 3308
AcuI CTGAAG 9 cut(s) 732, 791, 1233, 1422, 1800, 1938, 1950, 2037, 3252
AcyI GRCGYC 2 cut(s) 180, 1588
AdeI CACNNNGTG 1 cut(s) 1730
AfaI GTAC 5 cut(s) 124, 828, 1041, 2700, 3120
AfiI CCNNNNNNNGG 8 cut(s) 506, 665, 804, 2568, 2831, 3223, 3380, 3472
AflIII ACRYGT 2 cut(s) 2348, 3560
AhlI ACTAGT 1 cut(s) 653
AjiI CACGTC 1 cut(s) 3563
AloI GAACNNNNNNTCC 4 cut(s) 2133, 2165, 2190, 2222
Alw21I GWGCWC 4 cut(s) 1317, 1504, 1735, 1809
Alw26I GTCTC 5 cut(s) 215, 644, 771, 1116, 2307
AlwI GGATC 5 cut(s) 291, 331, 726, 1715, 3428
AlwNI CAGNNNCTG 2 cut(s) 2252, 2869
AoxI GGCC 5 cut(s) 118, 916, 1537, 3247, 3370
ApoI RAATTY 8 cut(s) 883, 1005, 1056, 1088, 2025, 2617, 3049, 3308
ArsI GACNNNNNNTTYG 4 cut(s) 1573, 1605, 3164, 3196
Asp700I GAANNNNTTC 1 cut(s) 1935
Asp718I GGTACC 1 cut(s) 2698
AspLEI GCGC 5 cut(s) 255, 2033, 2938, 3327, 3465
AspS9I GGNCC 4 cut(s) 1208, 2198, 2793, 3371
AsuC2I CCSGG 3 cut(s) 485, 2127, 2172
AsuHPI GGTGA 9 cut(s) 77, 278, 425, 485, 797, 1020, 1187, 3159, 3266
AsuNHI GCTAGC 1 cut(s) 1240
AvaII GGWCC 3 cut(s) 1208, 2198, 2793
BaeGI GKGCMC 1 cut(s) 3284
BanI GGYRCC 3 cut(s) 358, 2698, 3272
BanII GRGCYC 4 cut(s) 1317, 1672, 1809, 2323
BbsI GAAGAC 1 cut(s) 594
Bbv12I GWGCWC 4 cut(s) 1317, 1504, 1735, 1809
BceAI ACGGC 4 cut(s) 81, 105, 1895, 3087
BcgI CGANNNNNNTGC 6 cut(s) 701, 735, 1793, 1827, 2601, 2635
BcnI CCSGG 3 cut(s) 485, 2127, 2172
BcoDI GTCTC 5 cut(s) 215, 644, 771, 1116, 2307
BcuI ACTAGT 1 cut(s) 653
BfaI CTAG 5 cut(s) 633, 654, 1220, 1241, 3084
BfmI CTRYAG 7 cut(s) 1012, 1227, 1566, 2882, 3375, 3402, 3409
BfoI RGCGCY 1 cut(s) 3466
BglII AGATCT 2 cut(s) 556, 1216
BmcAI AGTACT 1 cut(s) 1041
Bme18I GGWCC 3 cut(s) 1208, 2198, 2793
BmgBI CACGTC 1 cut(s) 3563
BmgT120I GGNCC 4 cut(s) 1208, 2198, 2793, 3371
BmiI GGNNCC 4 cut(s) 360, 2199, 2700, 3274
BmrI ACTGGG 1 cut(s) 552
BmtI GCTAGC 1 cut(s) 1244
BmuI ACTGGG 1 cut(s) 552
BpiI GAAGAC 1 cut(s) 594
BpmI CTGGAG 2 cut(s) 2745, 2846
Bpu10I CCTNAGC 1 cut(s) 1757
BpuEI CTTGAG 4 cut(s) 1142, 1516, 1628, 3509
BpuMI CCSGG 3 cut(s) 485, 2127, 2172
Bsa29I ATCGAT 1 cut(s) 1377
BsaAI YACGTR 1 cut(s) 830
BsaBI GATNNNNATC 1 cut(s) 2436
BsaHI GRCGYC 2 cut(s) 180, 1588
BsaI GGTCTC 1 cut(s) 215
BsaXI ACNNNNNCTCC 6 cut(s) 36, 66, 294, 324, 326, 356
Bsc4I CCNNNNNNNGG 8 cut(s) 506, 665, 804, 2568, 2831, 3223, 3380, 3472
Bse118I RCCGGY 3 cut(s) 960, 2579, 3113
Bse1I ACTGG 6 cut(s) 536, 547, 1002, 2424, 2760, 3437
Bse3DI GCAATG 4 cut(s) 1125, 1207, 2464, 2938
Bse8I GATNNNNATC 1 cut(s) 2436
BseCI ATCGAT 1 cut(s) 1377
BseJI GATNNNNATC 1 cut(s) 2436
BseLI CCNNNNNNNGG 8 cut(s) 506, 665, 804, 2568, 2831, 3223, 3380, 3472
BseMI GCAATG 4 cut(s) 1125, 1207, 2464, 2938
BseMII CTCAG 5 cut(s) 960, 1496, 1983, 2117, 3137
BseNI ACTGG 6 cut(s) 536, 547, 1002, 2424, 2760, 3437
BseRI GAGGAG 4 cut(s) 183, 186, 224, 875
BseSI GKGCMC 1 cut(s) 3284
BseX3I CGGCCG 1 cut(s) 118
BseYI CCCAGC 1 cut(s) 2252
BsgI GTGCAG 1 cut(s) 5
Bsh1236I CGCG 3 cut(s) 255, 2031, 2938
Bsh1285I CGRYCG 1 cut(s) 121
BshFI GGCC 5 cut(s) 120, 918, 1539, 3249, 3372
BshNI GGYRCC 3 cut(s) 358, 2698, 3272
BshVI ATCGAT 1 cut(s) 1377
BsiEI CGRYCG 1 cut(s) 121
BsiHKAI GWGCWC 4 cut(s) 1317, 1504, 1735, 1809
BsiSI CCGG 6 cut(s) 484, 961, 2126, 2172, 2580, 3114
BslFI GGGAC 6 cut(s) 755, 1088, 1887, 2153, 2211, 2702
BslI CCNNNNNNNGG 8 cut(s) 506, 665, 804, 2568, 2831, 3223, 3380, 3472
BsmAI GTCTC 5 cut(s) 215, 644, 771, 1116, 2307
BsmFI GGGAC 6 cut(s) 755, 1088, 1887, 2153, 2211, 2702
BsmI GAATGC 3 cut(s) 168, 541, 688
BsnI GGCC 5 cut(s) 120, 918, 1539, 3249, 3372
Bso31I GGTCTC 1 cut(s) 215
Bsp1286I GDGCHC 7 cut(s) 1317, 1504, 1672, 1735, 1809, 2323, 3284
Bsp143I GATC 9 cut(s) 283, 323, 556, 718, 787, 1216, 1720, 2871, 3433
Bsp19I CCATGG 1 cut(s) 2778
BspANI GGCC 5 cut(s) 120, 918, 1539, 3249, 3372
BspCNI CTCAG 5 cut(s) 961, 1497, 1984, 2116, 3136
BspDI ATCGAT 1 cut(s) 1377
BspFNI CGCG 3 cut(s) 255, 2031, 2938
BspHI TCATGA 2 cut(s) 1150, 1309
BspLI GGNNCC 4 cut(s) 360, 2199, 2700, 3274
BspMAI CTGCAG 1 cut(s) 3379
BspOI GCTAGC 1 cut(s) 1244
BspPI GGATC 5 cut(s) 291, 331, 726, 1715, 3428
BspT107I GGYRCC 3 cut(s) 358, 2698, 3272
BspTNI GGTCTC 1 cut(s) 215
BsrBI CCGCTC 1 cut(s) 865
BsrDI GCAATG 4 cut(s) 1125, 1207, 2464, 2938
BsrFI RCCGGY 3 cut(s) 960, 2579, 3113
BsrI ACTGG 6 cut(s) 536, 547, 1002, 2424, 2760, 3437
BssAI RCCGGY 3 cut(s) 960, 2579, 3113
BssMI GATC 9 cut(s) 283, 323, 556, 718, 787, 1216, 1720, 2871, 3433
BssNI GRCGYC 2 cut(s) 180, 1588
BssT1I CCWWGG 2 cut(s) 2692, 2778
Bst4CI ACNGT 8 cut(s) 48, 442, 2000, 2191, 3040, 3196, 3403, 3430
Bst6I CTCTTC 2 cut(s) 2232, 2881
BstACI GRCGYC 2 cut(s) 180, 1588
BstAPI GCANNNNNTGC 3 cut(s) 174, 2633, 3160
BstBAI YACGTR 1 cut(s) 830
BstC8I GCNNGC 4 cut(s) 11, 966, 1242, 1680
BstDEI CTNAG 9 cut(s) 969, 1505, 1541, 1631, 1757, 1992, 2103, 2974, 3123
BstDSI CCRYGG 2 cut(s) 2515, 2778
BstFNI CGCG 3 cut(s) 255, 2031, 2938
BstH2I RGCGCY 1 cut(s) 3466
BstHHI GCGC 5 cut(s) 255, 2033, 2938, 3327, 3465
BstKTI GATC 9 cut(s) 286, 326, 559, 721, 790, 1219, 1723, 2874, 3436
BstMAI GTCTC 5 cut(s) 215, 644, 771, 1116, 2307
BstMBI GATC 9 cut(s) 283, 323, 556, 718, 787, 1216, 1720, 2871, 3433
BstMCI CGRYCG 1 cut(s) 121
BstNSI RCATGY 2 cut(s) 968, 2352
BstSFI CTRYAG 7 cut(s) 1012, 1227, 1566, 2882, 3375, 3402, 3409
BstSLI GKGCMC 1 cut(s) 3284
BstUI CGCG 3 cut(s) 255, 2031, 2938
BstV2I GAAGAC 1 cut(s) 594
BstX2I RGATCY 2 cut(s) 556, 1216
BstXI CCANNNNNNTGG 1 cut(s) 2852
BstYI RGATCY 2 cut(s) 556, 1216
BstZI CGGCCG 1 cut(s) 118
Bsu15I ATCGAT 1 cut(s) 1377
BsuRI GGCC 5 cut(s) 120, 918, 1539, 3249, 3372
BsuTUI ATCGAT 1 cut(s) 1377
BtgI CCRYGG 2 cut(s) 2515, 2778
BtrI CACGTC 1 cut(s) 3563
BtsI GCAGTG 1 cut(s) 2478
BtsIMutI CAGTG 5 cut(s) 529, 2005, 2431, 2478, 3355
Cac8I GCNNGC 4 cut(s) 11, 966, 1242, 1680
CaiI CAGNNNCTG 2 cut(s) 2252, 2869
CciI TCATGA 2 cut(s) 1150, 1309
CfoI GCGC 5 cut(s) 255, 2033, 2938, 3327, 3465
Cfr10I RCCGGY 3 cut(s) 960, 2579, 3113
Cfr13I GGNCC 4 cut(s) 1208, 2198, 2793, 3371
ClaI ATCGAT 1 cut(s) 1377
CseI GACGC 3 cut(s) 169, 1565, 1577
Csp6I GTAC 5 cut(s) 123, 827, 1040, 2699, 3119
CviAII CATG 9 cut(s) 965, 1065, 1151, 1237, 1310, 1486, 2349, 2389, 2779
CviQI GTAC 5 cut(s) 123, 827, 1040, 2699, 3119
DdeI CTNAG 9 cut(s) 969, 1505, 1541, 1631, 1757, 1992, 2103, 2974, 3123
DpnI GATC 9 cut(s) 285, 325, 558, 720, 789, 1218, 1722, 2873, 3435
DpnII GATC 9 cut(s) 283, 323, 556, 718, 787, 1216, 1720, 2871, 3433
DraIII CACNNNGTG 1 cut(s) 1730
EaeI YGGCCR 1 cut(s) 118
EagI CGGCCG 1 cut(s) 118
Eam1104I CTCTTC 2 cut(s) 2232, 2881
EarI CTCTTC 2 cut(s) 2232, 2881
Ecl136II GAGCTC 2 cut(s) 1315, 1807
EclXI CGGCCG 1 cut(s) 118
Eco130I CCWWGG 2 cut(s) 2692, 2778
Eco24I GRGCYC 4 cut(s) 1317, 1672, 1809, 2323
Eco31I GGTCTC 1 cut(s) 215
Eco32I GATATC 2 cut(s) 1144, 2899
Eco47I GGWCC 3 cut(s) 1208, 2198, 2793
Eco52I CGGCCG 1 cut(s) 118
Eco53kI GAGCTC 2 cut(s) 1315, 1807
Eco57I CTGAAG 9 cut(s) 732, 791, 1233, 1422, 1800, 1938, 1950, 2037, 3252
EcoICRI GAGCTC 2 cut(s) 1315, 1807
EcoO109I RGGNCCY 3 cut(s) 2198, 2793, 3371
EcoRI GAATTC 1 cut(s) 2617
EcoRV GATATC 2 cut(s) 1144, 2899
EcoT14I CCWWGG 2 cut(s) 2692, 2778
EcoT38I GRGCYC 4 cut(s) 1317, 1672, 1809, 2323
ErhI CCWWGG 2 cut(s) 2692, 2778
FaeI CATG 9 cut(s) 968, 1068, 1154, 1240, 1313, 1489, 2352, 2392, 2782
FalI AAGNNNNNCTT 4 cut(s) 1923, 1955, 3147, 3179
FaqI GGGAC 6 cut(s) 755, 1088, 1887, 2153, 2211, 2702
FatI CATG 9 cut(s) 964, 1064, 1150, 1236, 1309, 1485, 2348, 2388, 2778
FblI GTMKAC 1 cut(s) 3405
FriOI GRGCYC 4 cut(s) 1317, 1672, 1809, 2323
FspAI RTGCGCAY 1 cut(s) 3326
FspBI CTAG 5 cut(s) 633, 654, 1220, 1241, 3084
FspI TGCGCA 1 cut(s) 3326
GlaI GCGC 5 cut(s) 254, 2032, 2937, 3326, 3464
GsaI CCCAGC 1 cut(s) 2256
GsuI CTGGAG 2 cut(s) 2745, 2846
HaeII RGCGCY 1 cut(s) 3466
HaeIII GGCC 5 cut(s) 120, 918, 1539, 3249, 3372
HapII CCGG 6 cut(s) 484, 961, 2126, 2172, 2580, 3114
HgaI GACGC 3 cut(s) 169, 1565, 1577
HhaI GCGC 5 cut(s) 255, 2033, 2938, 3327, 3465
Hin1I GRCGYC 2 cut(s) 180, 1588
Hin1II CATG 9 cut(s) 968, 1068, 1154, 1240, 1313, 1489, 2352, 2392, 2782
Hin6I GCGC 5 cut(s) 253, 2031, 2936, 3325, 3463
HinP1I GCGC 5 cut(s) 253, 2031, 2936, 3325, 3463
HincII GTYRAC 2 cut(s) 1914, 2218
HindII GTYRAC 2 cut(s) 1914, 2218
HindIII AAGCTT 3 cut(s) 511, 815, 1977
HpaI GTTAAC 1 cut(s) 1914
HpaII CCGG 6 cut(s) 484, 961, 2126, 2172, 2580, 3114
HphI GGTGA 9 cut(s) 77, 278, 425, 485, 797, 1020, 1187, 3159, 3266
Hpy166II GTNNAC 5 cut(s) 1914, 2218, 3119, 3406, 3566
Hpy8I GTNNAC 5 cut(s) 1914, 2218, 3119, 3406, 3566
Hpy99I CGWCG 4 cut(s) 102, 185, 3108, 3450
HpyCH4III ACNGT 8 cut(s) 48, 442, 2000, 2191, 3040, 3196, 3403, 3430
HpyCH4IV ACGT 2 cut(s) 829, 3562
HpyF3I CTNAG 9 cut(s) 969, 1505, 1541, 1631, 1757, 1992, 2103, 2974, 3123
HpySE526I ACGT 2 cut(s) 829, 3562
Hsp92I GRCGYC 2 cut(s) 180, 1588
Hsp92II CATG 9 cut(s) 968, 1068, 1154, 1240, 1313, 1489, 2352, 2392, 2782
HspAI GCGC 5 cut(s) 253, 2031, 2936, 3325, 3463
KpnI GGTACC 1 cut(s) 2702
KspAI GTTAAC 1 cut(s) 1914
Kzo9I GATC 9 cut(s) 283, 323, 556, 718, 787, 1216, 1720, 2871, 3433
LmnI GCTCC 7 cut(s) 211, 862, 1288, 1812, 2129, 2726, 2865
MaeI CTAG 5 cut(s) 633, 654, 1220, 1241, 3084
MaeII ACGT 2 cut(s) 829, 3562
MaeIII GTNAC 7 cut(s) 56, 146, 436, 2242, 2258, 2344, 2687
MalI GATC 9 cut(s) 285, 325, 558, 720, 789, 1218, 1722, 2873, 3435
MbiI CCGCTC 1 cut(s) 865
MboI GATC 9 cut(s) 283, 323, 556, 718, 787, 1216, 1720, 2871, 3433
MflI RGATCY 2 cut(s) 556, 1216
MhlI GDGCHC 7 cut(s) 1317, 1504, 1672, 1735, 1809, 2323, 3284
MlyI GAGTC 1 cut(s) 425
MmeI TCCRAC 4 cut(s) 261, 849, 1751, 3059
MroXI GAANNNNTTC 1 cut(s) 1935
MseI TTAA 5 cut(s) 429, 1170, 1913, 2712, 3425
MslI CAYNNNNRTG 4 cut(s) 534, 1137, 1200, 2310
MspA1I CMGCKG 2 cut(s) 2249, 2666
MspI CCGG 6 cut(s) 484, 961, 2126, 2172, 2580, 3114
Mva1269I GAATGC 3 cut(s) 168, 541, 688
MvnI CGCG 3 cut(s) 255, 2031, 2938
NciI CCSGG 3 cut(s) 485, 2127, 2172
NcoI CCATGG 1 cut(s) 2778
NdeII GATC 9 cut(s) 283, 323, 556, 718, 787, 1216, 1720, 2871, 3433
NheI GCTAGC 1 cut(s) 1240
NlaIII CATG 9 cut(s) 968, 1068, 1154, 1240, 1313, 1489, 2352, 2392, 2782
NlaIV GGNNCC 4 cut(s) 360, 2199, 2700, 3274
NmeAIII GCCGAG 1 cut(s) 96
NmuCI GTSAC 4 cut(s) 56, 146, 2344, 2687
NsbI TGCGCA 1 cut(s) 3326
NspI RCATGY 2 cut(s) 968, 2352
PaeI GCATGC 1 cut(s) 968
PagI TCATGA 2 cut(s) 1150, 1309
PciI ACATGT 1 cut(s) 2348
PctI GAATGC 3 cut(s) 168, 541, 688
PdmI GAANNNNTTC 1 cut(s) 1935
PflMI CCANNNNNTGG 3 cut(s) 804, 2831, 3223
PfoI TCCNGGA 1 cut(s) 2862
PleI GAGTC 1 cut(s) 424
PpsI GAGTC 1 cut(s) 424
Ppu21I YACGTR 1 cut(s) 830
PpuMI RGGWCCY 2 cut(s) 2198, 2793
PscI ACATGT 1 cut(s) 2348
Psp124BI GAGCTC 2 cut(s) 1317, 1809
Psp5II RGGWCCY 2 cut(s) 2198, 2793
PspFI CCCAGC 1 cut(s) 2252
PspN4I GGNNCC 4 cut(s) 360, 2199, 2700, 3274
PspPI GGNCC 4 cut(s) 1208, 2198, 2793, 3371
PspPPI RGGWCCY 2 cut(s) 2198, 2793
PsrI GAACNNNNNNTAC 2 cut(s) 1731, 1763
PstI CTGCAG 1 cut(s) 3379
PstNI CAGNNNCTG 2 cut(s) 2252, 2869
PsuI RGATCY 2 cut(s) 556, 1216
RsaI GTAC 5 cut(s) 124, 828, 1041, 2700, 3120
RsaNI GTAC 5 cut(s) 123, 827, 1040, 2699, 3119
RseI CAYNNNNRTG 4 cut(s) 534, 1137, 1200, 2310
SacI GAGCTC 2 cut(s) 1317, 1809
SaqAI TTAA 5 cut(s) 429, 1170, 1913, 2712, 3425
Sau3AI GATC 9 cut(s) 283, 323, 556, 718, 787, 1216, 1720, 2871, 3433
Sau96I GGNCC 4 cut(s) 1208, 2198, 2793, 3371
ScaI AGTACT 1 cut(s) 1041
SchI GAGTC 1 cut(s) 425
SduI GDGCHC 7 cut(s) 1317, 1504, 1672, 1735, 1809, 2323, 3284
SfcI CTRYAG 7 cut(s) 1012, 1227, 1566, 2882, 3375, 3402, 3409
SinI GGWCC 3 cut(s) 1208, 2198, 2793
SmiMI CAYNNNNRTG 4 cut(s) 534, 1137, 1200, 2310
SmlI CTYRAG 4 cut(s) 1157, 1495, 1607, 3488
SmoI CTYRAG 4 cut(s) 1157, 1495, 1607, 3488
SpeI ACTAGT 1 cut(s) 653
SphI GCATGC 1 cut(s) 968
SspI AATATT 4 cut(s) 1925, 1947, 2043, 2922
SspMI CTAG 5 cut(s) 633, 654, 1220, 1241, 3084
SstI GAGCTC 2 cut(s) 1317, 1809
StyI CCWWGG 2 cut(s) 2692, 2778
TaaI ACNGT 8 cut(s) 48, 442, 2000, 2191, 3040, 3196, 3403, 3430
TaiI ACGT 2 cut(s) 832, 3565
TaqI TCGA 8 cut(s) 100, 790, 952, 991, 1377, 1896, 2323, 3106
TatI WGTACW 1 cut(s) 1039
TauI GCSGC 7 cut(s) 113, 180, 258, 1793, 2252, 2669, 2941
Tru1I TTAA 5 cut(s) 429, 1170, 1913, 2712, 3425
Tru9I TTAA 5 cut(s) 429, 1170, 1913, 2712, 3425
TscAI CASTG 5 cut(s) 536, 2005, 2431, 2478, 3355
TseFI GTSAC 4 cut(s) 56, 146, 2344, 2687
Tsp45I GTSAC 4 cut(s) 56, 146, 2344, 2687
TspDTI ATGAA 7 cut(s) 245, 1049, 1608, 1612, 1739, 2250, 3179
TspGWI ACGGA 7 cut(s) 44, 125, 134, 409, 519, 2629, 3434
TspRI CASTG 5 cut(s) 536, 2005, 2431, 2478, 3355
Van91I CCANNNNNTGG 3 cut(s) 804, 2831, 3223
VpaK11BI GGWCC 3 cut(s) 1208, 2198, 2793
XapI RAATTY 8 cut(s) 883, 1005, 1056, 1088, 2025, 2617, 3049, 3308
XceI RCATGY 2 cut(s) 968, 2352
XcmI CCANNNNNNNNNTGG 1 cut(s) 296
XmiI GTMKAC 1 cut(s) 3405
XmnI GAANNNNTTC 1 cut(s) 1935
XspI CTAG 5 cut(s) 633, 654, 1220, 1241, 3084
ZrmI AGTACT 1 cut(s) 1041
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.