Rw4G013810

Phosphoglucan, water dikinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Forward (+)
32333598 .. 32344105
10508 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G013810.1

Sequence Viewer

Length: 3588 bp
ATGGATTGCGTGCCTTCGCTGCACACCTCCGCTTCTTCTTCTTCTTCTTCGTCGCAGTTCCTTCGTCACAAGCAATTCAGATTCCTCCACAATCACCTTCAATGCCGTCGAAGCGTTGCGGCACTCGGCCGTAGAACAAGTTTCCGTCCTCTCCATCACAAATCAAACAATCTTCGGATTCTCTGCGGCGTCGGTGTTTCTCCTCCTCAATCCACAGAGGAGCAGAAGGAGACCAAGATGAAGTCCAAGTCAAAGTCTGGGCGCGGCAAGGTTTGGCTTGATATTAGGTTGGATCACCAAGTTGTGTTTGGAGAGAGTGTTGCGGTTTTGGGATCATCAAAGGAGTTAGGGTCGTGGAAGAAGAAGGTGCCTCTGAATTGGACAGAGAGTGGATGGGTATGCAAATTGGAGTTCAAGGGGGGTGAATCCATTGAGTATAAGTTTGTAACTGTTGGGGCTGACAAGAGTATGCTTTGGGAAGGTGGTGATAACCGGGTTTTGAAACTTCCCAACGGAGGAAGCTTTGGGATGGTTTGCCGCTGGAATGCAACTGGGGAGAATGTAGATCTATTCCCATTGGACAATGAGGATGGTGTTGAATATAAGGGGTCTTCTGCTGCCCAAACTGCTAATACAACTGCCAGTTCTCCAGATGTGGAGACTAGTCCTTTTGTTGGTCAATGGAAAGGGAATGCCATCTCATTTATGCGGTCAAATGAGCATCGGGATCGTGAATCAGGAAGAAATTGGGACACTTCAGGTCTTGAAGGGTTGTCTCTTAAGTTGGTTGAAGGTGATCGAAATGCCAGGAATTGGTGGCAAAAGCTTGAAGTTGTACGTGATATACTACTTGAAAGTTCACAAAGTGAGGAGCGGTTGGATGCTCTCATAAATTCTTCCATTTATTTGAAGTGGATAAACACAGGCCAGATTCCTTGCTTTGAAGGTGGAGGTCATCATCGACCAAACCGGCATGCTGAGATTTCCAGGGTTATATTTCGAGAACTGGAAAGAATTTCCTGTAGGAAAGATACTTCACCCCAGGAAGTACTTGTTATCCGCAAAATTCATCCATGTCTGCCATCGTTCAAAGCAGAATTTACTGCATCTGTCCCCCTAACACGAATCAGAGACATTGCTCATCGGAATGATATCCCTCATGACCTCAAGCAAGAAATTAAGCACACAATACAAAACAAACTTCACCGCAATGCTGGTCCTGAAGATCTAGTTGCTACAGAAGCCATGCTAGCAAGAATAACCAAGAACCCTGGACAATATAGTGAAGCATTTGTGGAGCAGTTCAAGATATTCCATCATGAGCTCAAAGACTTTTTCAATGCTGGAAGCCTTGCTGAACAACTTGAATCCATCAAAGATTCCATCGATGATAAAGGCCGTTCAGCTCTTACATTGTTTTTGGAGTGCAAAAAGGGTTTGGATGCTTCAGCAGAATCAAGTAAAGTTTTGGGGTCTGATTTGTTGTTCAAGACCATGCAATCCTTGAGTGCTCTGAGAGATATAATTGCAAAGGGTCTTGAAAGTGGCCTTAGAAATGATGCTTCTGATGCTGCTATAGCTATGCGTCAAAAGTGGCGTCTTTGCGAGATTGGACTTGAGGACTATTCATTCATCCTTCTAAGCAGATTCGCTAATGAGCTTGAAGCTATGGGAGGGGCTCATTGGCTGGCACAAGATGTGAAATCAAAGGATGTAAGCTCCTGGAATGATCCACTTGGTGCTCTTGTAGTTGGTGTTCATCAGCTAAGGTTATCTGGTTGGAAGCCTGAAGAATGTGCGGCTATTCAAAATGAGCTCCTTGCCTGGAAAGCAAGAGGTCTTTCTCAAACAGAAGCGAGTGAAGATGGCAAAACAATCTGGGGACTACGGCATAAAGCTACTCTCGATAGAGCCAGGAGGTTAACTGAAGAATATTCTGAAGCACTTCTTCAAATATTTCCCCAAAATGTCCAGGTATTAGGAAAAGCTTTTGGAATACCTGAGAACAGTGTAAGGACATACGCTGAAGCTGAAATTCGCGCTGGTGTAATATTTCAGGTTTCAAAACTCTGTACCCTGCTTTTGAAAGCAGTTAGAACTACCATTGGTTCTCAGGGTTGGGATGTTATTGTGCCGGGAGCTGCTATGGGAACATTGGTTCAGGTTGAGAGGATTGTCCCCGGTTCAATACCATCAACTGTTGAGGGACCTGTTGTTCTCGTTGTCAACAAAGCAGATGGAGATGAAGAGGTAACAGCGGCTGGGAGTAACATTGTGGGAGTTGTTCTTCTGCAAGAGCTTCCTCACTTGTCTCATCTTGGTGTCAGGGCTCGACAAGAGAAGGTTGTGTTTGTGACATGTGAAGATGATGACAAAGTTGCTGATATACAAAAACTCATGGGAAAATATGTGAGGTTAGAAGCATCCTCGTCCAGTGTTGATATATATCCTTCAACAGAAAACAGCAATGGCACTTTTGCAGTGAAAAATGTTTCAAGTGATGTTGCACCAAAAGTTGAATCCCGTGGAACTCCTGACCCTTCCTGGTCTGCTGCTAAAACCCCAGAATCCAATAAGGGGGTATCTGCCGGTGGAGTTTTACTACTTGCTGATGCAGAAGCACGGAATTCGGGTGCAAAAGCTGCTGCTTGTGGTCGTTTAGCTTCTTTGGCAGCGGCATCTGATAAAGTTTTTAGTGACCAAGGGGTACCAGCTTCCTTTAATGTCCCTGCTGGAGCAGTGATACCATTTGGCTCTATGGAACTGGCATTAGAGCAAAGCAAATCCATGGAATCATTCAGGTCCTTTCTAAATATGATAGAAACATTGAAGCCAGAAAGTGGAGAACTTGACCAAGTATGTGGTCAGCTCCAGGAACTGATCTCTTCTCTACAGCCCTCCAAAGATATCATTGATAGAATAGCCAAAATATTTCCAGGCAATGCGCGGCTAATTGTTCGTTCAAGTGCTAATGTTGAGGACTTAGCTGGAATGTCGGCTGCTGGACTATATGATTCAATTCCCAATGTTAGTGTTTCAAATCCGACAGTATTTGCAAATTCTATAAGCAAAGTGTGGGCATCACTTTATACTAGGAGGGCAGTTTTGAGCCGTCGAGTTGCCGGTGTACCTCAGAAGGATGCTACAATGGCAATTCTGGTGCAAGAAATGCTTTCACCAGACTTATCGTTTGTGCTTCATACAGTCAGCCCAACAGACCAAGACCATAATTTGGTTGAGGCTGAAATTGCTTCTGGCCTCGGTGAAACTTTGGCTTCAGGCACCAGGGGCACACCCTGGCGTATATCGTCTGGAAAATTTGATGGGAATGTGCGCACATTGGCATTTGCTAATTTCAGTGAGGAACTACTTGGTGGAGGCCCTGCAGACGGGGAGGTTATCCATTTGACTGTAGACTACAGCAAGAAACCATTAACTGTTGATCCAGTTTTCCGTCGGCAGCTTGGTCAGCGCCTCGGTGCGGTGGGATTTTTCCTTGAGCAGAAGTTCGGCTGCCCACAGGATGTGGAAGGATGTGTTGTTGGCAAAGACATCTTTATAGTCCAGACACGTCCACAGCCCCTATAA

Protein Analysis

1195

Amino Acids

130.67

Weight (kDa)

6.55

Isoelectric Point (pI)

41.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CBM_20 PF00686 97 - 173 1.3e-14 Starch binding domain
GWD1_pHisD PF22973 707 - 820 2.5e-34 Alpha-glucan water dikinase, phosphohistidine-like domain
PPDK_N PF01326 906 - 1193 1.9e-30 Pyruvate phosphate dikinase, AMP/ATP-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 3335
Acc65I GGTACC 1 cut(s) 2707
AccB1I GGYRCC 3 cut(s) 367, 2707, 3281
AccB7I CCANNNNNTGG 3 cut(s) 813, 2840, 3232
AccBSI CCGCTC 1 cut(s) 874
AccI GTMKAC 1 cut(s) 3414
AccII CGCG 3 cut(s) 264, 2040, 2947
AclWI GGATC 5 cut(s) 300, 340, 735, 1724, 3437
AcoI YGGCCR 1 cut(s) 127
AcsI RAATTY 8 cut(s) 892, 1014, 1065, 1097, 2034, 2626, 3058, 3317
AcuI CTGAAG 8 cut(s) 741, 1242, 1431, 1809, 1947, 1959, 2046, 3261
AcyI GRCGYC 2 cut(s) 189, 1597
AdeI CACNNNGTG 2 cut(s) 866, 1739
AfaI GTAC 5 cut(s) 837, 1050, 2074, 2709, 3129
AfiI CCNNNNNNNGG 8 cut(s) 515, 674, 813, 2577, 2840, 3232, 3389, 3481
AflII CTTAAG 1 cut(s) 779
AflIII ACRYGT 2 cut(s) 2357, 3569
AhlI ACTAGT 1 cut(s) 662
AjiI CACGTC 1 cut(s) 3572
AloI GAACNNNNNNTCC 4 cut(s) 2142, 2174, 2199, 2231
Alw21I GWGCWC 4 cut(s) 1326, 1513, 1744, 1818
Alw26I GTCTC 5 cut(s) 224, 653, 780, 1125, 2316
AlwI GGATC 5 cut(s) 300, 340, 735, 1724, 3437
AlwNI CAGNNNCTG 2 cut(s) 2261, 2878
AoxI GGCC 6 cut(s) 127, 925, 1396, 1546, 3256, 3379
ApoI RAATTY 8 cut(s) 892, 1014, 1065, 1097, 2034, 2626, 3058, 3317
ArsI GACNNNNNNTTYG 4 cut(s) 1582, 1614, 3173, 3205
Asp700I GAANNNNTTC 1 cut(s) 1944
Asp718I GGTACC 1 cut(s) 2707
AspLEI GCGC 5 cut(s) 264, 2042, 2947, 3336, 3474
AspS9I GGNCC 4 cut(s) 1217, 2207, 2802, 3380
AsuC2I CCSGG 3 cut(s) 494, 2136, 2181
AsuHPI GGTGA 9 cut(s) 86, 287, 434, 497, 806, 1029, 1196, 3168, 3275
AsuNHI GCTAGC 1 cut(s) 1249
AvaII GGWCC 3 cut(s) 1217, 2207, 2802
BaeGI GKGCMC 1 cut(s) 3293
BanI GGYRCC 3 cut(s) 367, 2707, 3281
BanII GRGCYC 4 cut(s) 1326, 1681, 1818, 2332
BbsI GAAGAC 1 cut(s) 603
Bbv12I GWGCWC 4 cut(s) 1326, 1513, 1744, 1818
BceAI ACGGC 5 cut(s) 90, 114, 1383, 1904, 3096
BcgI CGANNNNNNTGC 6 cut(s) 44, 78, 710, 744, 2610, 2644
BcnI CCSGG 3 cut(s) 494, 2136, 2181
BcoDI GTCTC 5 cut(s) 224, 653, 780, 1125, 2316
BcuI ACTAGT 1 cut(s) 662
BfaI CTAG 4 cut(s) 663, 1229, 1250, 3093
BfmI CTRYAG 7 cut(s) 1021, 1236, 1575, 2891, 3384, 3411, 3418
BfoI RGCGCY 1 cut(s) 3475
BfrI CTTAAG 1 cut(s) 779
BglII AGATCT 2 cut(s) 565, 1225
BmcAI AGTACT 1 cut(s) 1050
Bme18I GGWCC 3 cut(s) 1217, 2207, 2802
BmgBI CACGTC 1 cut(s) 3572
BmgT120I GGNCC 4 cut(s) 1217, 2207, 2802, 3380
BmiI GGNNCC 4 cut(s) 369, 2208, 2709, 3283
BmrI ACTGGG 1 cut(s) 561
BmtI GCTAGC 1 cut(s) 1253
BmuI ACTGGG 1 cut(s) 561
BpiI GAAGAC 1 cut(s) 603
BpmI CTGGAG 3 cut(s) 633, 2754, 2855
Bpu10I CCTNAGC 1 cut(s) 1766
BpuEI CTTGAG 4 cut(s) 1151, 1525, 1637, 3518
BpuMI CCSGG 3 cut(s) 494, 2136, 2181
Bsa29I ATCGAT 1 cut(s) 1386
BsaAI YACGTR 1 cut(s) 839
BsaBI GATNNNNATC 1 cut(s) 2445
BsaHI GRCGYC 2 cut(s) 189, 1597
BsaI GGTCTC 1 cut(s) 224
BsaXI ACNNNNNCTCC 4 cut(s) 303, 333, 335, 365
Bsc4I CCNNNNNNNGG 8 cut(s) 515, 674, 813, 2577, 2840, 3232, 3389, 3481
Bse118I RCCGGY 3 cut(s) 969, 2588, 3122
Bse1I ACTGG 6 cut(s) 556, 642, 1011, 2433, 2769, 3446
Bse3DI GCAATG 4 cut(s) 1134, 1216, 2473, 2947
Bse8I GATNNNNATC 1 cut(s) 2445
BseCI ATCGAT 1 cut(s) 1386
BseJI GATNNNNATC 1 cut(s) 2445
BseLI CCNNNNNNNGG 8 cut(s) 515, 674, 813, 2577, 2840, 3232, 3389, 3481
BseMI GCAATG 4 cut(s) 1134, 1216, 2473, 2947
BseMII CTCAG 5 cut(s) 969, 1505, 1992, 2126, 3146
BseNI ACTGG 6 cut(s) 556, 642, 1011, 2433, 2769, 3446
BseRI GAGGAG 4 cut(s) 192, 195, 233, 884
BseSI GKGCMC 1 cut(s) 3293
BseX3I CGGCCG 1 cut(s) 127
BseYI CCCAGC 1 cut(s) 2261
BsgI GTGCAG 1 cut(s) 5
Bsh1236I CGCG 3 cut(s) 264, 2040, 2947
Bsh1285I CGRYCG 1 cut(s) 130
BshFI GGCC 6 cut(s) 129, 927, 1398, 1548, 3258, 3381
BshNI GGYRCC 3 cut(s) 367, 2707, 3281
BshVI ATCGAT 1 cut(s) 1386
BsiEI CGRYCG 1 cut(s) 130
BsiHKAI GWGCWC 4 cut(s) 1326, 1513, 1744, 1818
BsiSI CCGG 6 cut(s) 493, 970, 2135, 2181, 2589, 3123
BslFI GGGAC 6 cut(s) 764, 1097, 1896, 2162, 2220, 2711
BslI CCNNNNNNNGG 8 cut(s) 515, 674, 813, 2577, 2840, 3232, 3389, 3481
BsmAI GTCTC 5 cut(s) 224, 653, 780, 1125, 2316
BsmFI GGGAC 6 cut(s) 764, 1097, 1896, 2162, 2220, 2711
BsmI GAATGC 2 cut(s) 550, 697
BsnI GGCC 6 cut(s) 129, 927, 1398, 1548, 3258, 3381
Bso31I GGTCTC 1 cut(s) 224
Bsp1286I GDGCHC 7 cut(s) 1326, 1513, 1681, 1744, 1818, 2332, 3293
Bsp143I GATC 9 cut(s) 292, 332, 565, 727, 796, 1225, 1729, 2880, 3442
Bsp19I CCATGG 1 cut(s) 2787
BspANI GGCC 6 cut(s) 129, 927, 1398, 1548, 3258, 3381
BspCNI CTCAG 5 cut(s) 970, 1506, 1993, 2125, 3145
BspDI ATCGAT 1 cut(s) 1386
BspFNI CGCG 3 cut(s) 264, 2040, 2947
BspHI TCATGA 2 cut(s) 1159, 1318
BspLI GGNNCC 4 cut(s) 369, 2208, 2709, 3283
BspMAI CTGCAG 1 cut(s) 3388
BspOI GCTAGC 1 cut(s) 1253
BspPI GGATC 5 cut(s) 300, 340, 735, 1724, 3437
BspT107I GGYRCC 3 cut(s) 367, 2707, 3281
BspTI CTTAAG 1 cut(s) 779
BspTNI GGTCTC 1 cut(s) 224
BsrBI CCGCTC 1 cut(s) 874
BsrDI GCAATG 4 cut(s) 1134, 1216, 2473, 2947
BsrFI RCCGGY 3 cut(s) 969, 2588, 3122
BsrI ACTGG 6 cut(s) 556, 642, 1011, 2433, 2769, 3446
BssAI RCCGGY 3 cut(s) 969, 2588, 3122
BssMI GATC 9 cut(s) 292, 332, 565, 727, 796, 1225, 1729, 2880, 3442
BssNI GRCGYC 2 cut(s) 189, 1597
BssT1I CCWWGG 2 cut(s) 2701, 2787
Bst4CI ACNGT 7 cut(s) 451, 2009, 2200, 3049, 3205, 3412, 3439
Bst6I CTCTTC 2 cut(s) 2241, 2890
BstACI GRCGYC 2 cut(s) 189, 1597
BstAFI CTTAAG 1 cut(s) 779
BstAPI GCANNNNNTGC 2 cut(s) 2642, 3169
BstBAI YACGTR 1 cut(s) 839
BstC8I GCNNGC 4 cut(s) 11, 975, 1251, 1689
BstDEI CTNAG 9 cut(s) 978, 1514, 1550, 1640, 1766, 2001, 2112, 2983, 3132
BstDSI CCRYGG 2 cut(s) 2524, 2787
BstFNI CGCG 3 cut(s) 264, 2040, 2947
BstH2I RGCGCY 1 cut(s) 3475
BstHHI GCGC 5 cut(s) 264, 2042, 2947, 3336, 3474
BstKTI GATC 9 cut(s) 295, 335, 568, 730, 799, 1228, 1732, 2883, 3445
BstMAI GTCTC 5 cut(s) 224, 653, 780, 1125, 2316
BstMBI GATC 9 cut(s) 292, 332, 565, 727, 796, 1225, 1729, 2880, 3442
BstMCI CGRYCG 1 cut(s) 130
BstNSI RCATGY 2 cut(s) 977, 2361
BstSFI CTRYAG 7 cut(s) 1021, 1236, 1575, 2891, 3384, 3411, 3418
BstSLI GKGCMC 1 cut(s) 3293
BstUI CGCG 3 cut(s) 264, 2040, 2947
BstV2I GAAGAC 1 cut(s) 603
BstX2I RGATCY 2 cut(s) 565, 1225
BstXI CCANNNNNNTGG 1 cut(s) 2861
BstYI RGATCY 2 cut(s) 565, 1225
BstZI CGGCCG 1 cut(s) 127
Bsu15I ATCGAT 1 cut(s) 1386
BsuRI GGCC 6 cut(s) 129, 927, 1398, 1548, 3258, 3381
BsuTUI ATCGAT 1 cut(s) 1386
BtgI CCRYGG 2 cut(s) 2524, 2787
BtrI CACGTC 1 cut(s) 3572
BtsI GCAGTG 2 cut(s) 2487, 2745
BtsIMutI CAGTG 5 cut(s) 2014, 2440, 2487, 2745, 3364
Cac8I GCNNGC 4 cut(s) 11, 975, 1251, 1689
CaiI CAGNNNCTG 2 cut(s) 2261, 2878
CciI TCATGA 2 cut(s) 1159, 1318
CfoI GCGC 5 cut(s) 264, 2042, 2947, 3336, 3474
Cfr10I RCCGGY 3 cut(s) 969, 2588, 3122
Cfr13I GGNCC 4 cut(s) 1217, 2207, 2802, 3380
ClaI ATCGAT 1 cut(s) 1386
CseI GACGC 3 cut(s) 178, 1574, 1586
Csp6I GTAC 5 cut(s) 836, 1049, 2073, 2708, 3128
CviAII CATG 9 cut(s) 974, 1074, 1160, 1246, 1319, 1495, 2358, 2398, 2788
CviQI GTAC 5 cut(s) 836, 1049, 2073, 2708, 3128
DdeI CTNAG 9 cut(s) 978, 1514, 1550, 1640, 1766, 2001, 2112, 2983, 3132
DpnI GATC 9 cut(s) 294, 334, 567, 729, 798, 1227, 1731, 2882, 3444
DpnII GATC 9 cut(s) 292, 332, 565, 727, 796, 1225, 1729, 2880, 3442
DraIII CACNNNGTG 2 cut(s) 866, 1739
EaeI YGGCCR 1 cut(s) 127
EagI CGGCCG 1 cut(s) 127
Eam1104I CTCTTC 2 cut(s) 2241, 2890
EarI CTCTTC 2 cut(s) 2241, 2890
Ecl136II GAGCTC 2 cut(s) 1324, 1816
EclXI CGGCCG 1 cut(s) 127
Eco130I CCWWGG 2 cut(s) 2701, 2787
Eco24I GRGCYC 4 cut(s) 1326, 1681, 1818, 2332
Eco31I GGTCTC 1 cut(s) 224
Eco32I GATATC 2 cut(s) 1153, 2908
Eco47I GGWCC 3 cut(s) 1217, 2207, 2802
Eco52I CGGCCG 1 cut(s) 127
Eco53kI GAGCTC 2 cut(s) 1324, 1816
Eco57I CTGAAG 8 cut(s) 741, 1242, 1431, 1809, 1947, 1959, 2046, 3261
EcoICRI GAGCTC 2 cut(s) 1324, 1816
EcoO109I RGGNCCY 3 cut(s) 2207, 2802, 3380
EcoRI GAATTC 1 cut(s) 2626
EcoRV GATATC 2 cut(s) 1153, 2908
EcoT14I CCWWGG 2 cut(s) 2701, 2787
EcoT38I GRGCYC 4 cut(s) 1326, 1681, 1818, 2332
ErhI CCWWGG 2 cut(s) 2701, 2787
FaeI CATG 9 cut(s) 977, 1077, 1163, 1249, 1322, 1498, 2361, 2401, 2791
FalI AAGNNNNNCTT 4 cut(s) 1932, 1964, 3156, 3188
FaqI GGGAC 6 cut(s) 764, 1097, 1896, 2162, 2220, 2711
FatI CATG 9 cut(s) 973, 1073, 1159, 1245, 1318, 1494, 2357, 2397, 2787
FblI GTMKAC 1 cut(s) 3414
FriOI GRGCYC 4 cut(s) 1326, 1681, 1818, 2332
FspAI RTGCGCAY 1 cut(s) 3335
FspBI CTAG 4 cut(s) 663, 1229, 1250, 3093
FspI TGCGCA 1 cut(s) 3335
GlaI GCGC 5 cut(s) 263, 2041, 2946, 3335, 3473
GsaI CCCAGC 1 cut(s) 2265
GsuI CTGGAG 3 cut(s) 633, 2754, 2855
HaeII RGCGCY 1 cut(s) 3475
HaeIII GGCC 6 cut(s) 129, 927, 1398, 1548, 3258, 3381
HapII CCGG 6 cut(s) 493, 970, 2135, 2181, 2589, 3123
HgaI GACGC 3 cut(s) 178, 1574, 1586
HhaI GCGC 5 cut(s) 264, 2042, 2947, 3336, 3474
Hin1I GRCGYC 2 cut(s) 189, 1597
Hin1II CATG 9 cut(s) 977, 1077, 1163, 1249, 1322, 1498, 2361, 2401, 2791
Hin6I GCGC 5 cut(s) 262, 2040, 2945, 3334, 3472
HinP1I GCGC 5 cut(s) 262, 2040, 2945, 3334, 3472
HincII GTYRAC 2 cut(s) 1923, 2227
HindII GTYRAC 2 cut(s) 1923, 2227
HindIII AAGCTT 3 cut(s) 520, 824, 1986
HpaI GTTAAC 1 cut(s) 1923
HpaII CCGG 6 cut(s) 493, 970, 2135, 2181, 2589, 3123
HphI GGTGA 9 cut(s) 86, 287, 434, 497, 806, 1029, 1196, 3168, 3275
Hpy166II GTNNAC 6 cut(s) 860, 1923, 2227, 3128, 3415, 3575
Hpy8I GTNNAC 6 cut(s) 860, 1923, 2227, 3128, 3415, 3575
Hpy99I CGWCG 5 cut(s) 55, 111, 194, 3117, 3459
HpyCH4III ACNGT 7 cut(s) 451, 2009, 2200, 3049, 3205, 3412, 3439
HpyCH4IV ACGT 2 cut(s) 838, 3571
HpyF3I CTNAG 9 cut(s) 978, 1514, 1550, 1640, 1766, 2001, 2112, 2983, 3132
HpySE526I ACGT 2 cut(s) 838, 3571
Hsp92I GRCGYC 2 cut(s) 189, 1597
Hsp92II CATG 9 cut(s) 977, 1077, 1163, 1249, 1322, 1498, 2361, 2401, 2791
HspAI GCGC 5 cut(s) 262, 2040, 2945, 3334, 3472
KpnI GGTACC 1 cut(s) 2711
KspAI GTTAAC 1 cut(s) 1923
Kzo9I GATC 9 cut(s) 292, 332, 565, 727, 796, 1225, 1729, 2880, 3442
LmnI GCTCC 8 cut(s) 220, 871, 1297, 1724, 1821, 2138, 2735, 2874
MaeI CTAG 4 cut(s) 663, 1229, 1250, 3093
MaeII ACGT 2 cut(s) 838, 3571
MaeIII GTNAC 6 cut(s) 65, 445, 2251, 2267, 2353, 2696
MalI GATC 9 cut(s) 294, 334, 567, 729, 798, 1227, 1731, 2882, 3444
MbiI CCGCTC 1 cut(s) 874
MboI GATC 9 cut(s) 292, 332, 565, 727, 796, 1225, 1729, 2880, 3442
MflI RGATCY 2 cut(s) 565, 1225
MhlI GDGCHC 7 cut(s) 1326, 1513, 1681, 1744, 1818, 2332, 3293
MmeI TCCRAC 4 cut(s) 270, 858, 1760, 3068
MroXI GAANNNNTTC 1 cut(s) 1944
MseI TTAA 5 cut(s) 780, 1179, 1922, 2721, 3434
MslI CAYNNNNRTG 3 cut(s) 1146, 1209, 2319
MspA1I CMGCKG 3 cut(s) 540, 2258, 2675
MspCI CTTAAG 1 cut(s) 779
MspI CCGG 6 cut(s) 493, 970, 2135, 2181, 2589, 3123
Mva1269I GAATGC 2 cut(s) 550, 697
MvnI CGCG 3 cut(s) 264, 2040, 2947
NciI CCSGG 3 cut(s) 494, 2136, 2181
NcoI CCATGG 1 cut(s) 2787
NdeII GATC 9 cut(s) 292, 332, 565, 727, 796, 1225, 1729, 2880, 3442
NheI GCTAGC 1 cut(s) 1249
NlaIII CATG 9 cut(s) 977, 1077, 1163, 1249, 1322, 1498, 2361, 2401, 2791
NlaIV GGNNCC 4 cut(s) 369, 2208, 2709, 3283
NmeAIII GCCGAG 1 cut(s) 105
NmuCI GTSAC 3 cut(s) 65, 2353, 2696
NsbI TGCGCA 1 cut(s) 3335
NspI RCATGY 2 cut(s) 977, 2361
PaeI GCATGC 1 cut(s) 977
PagI TCATGA 2 cut(s) 1159, 1318
PciI ACATGT 1 cut(s) 2357
PctI GAATGC 2 cut(s) 550, 697
PdmI GAANNNNTTC 1 cut(s) 1944
PflMI CCANNNNNTGG 3 cut(s) 813, 2840, 3232
PfoI TCCNGGA 2 cut(s) 1721, 2871
Ppu21I YACGTR 1 cut(s) 839
PpuMI RGGWCCY 2 cut(s) 2207, 2802
PscI ACATGT 1 cut(s) 2357
Psp124BI GAGCTC 2 cut(s) 1326, 1818
Psp5II RGGWCCY 2 cut(s) 2207, 2802
PspFI CCCAGC 1 cut(s) 2261
PspN4I GGNNCC 4 cut(s) 369, 2208, 2709, 3283
PspPI GGNCC 4 cut(s) 1217, 2207, 2802, 3380
PspPPI RGGWCCY 2 cut(s) 2207, 2802
PsrI GAACNNNNNNTAC 2 cut(s) 1740, 1772
PstI CTGCAG 1 cut(s) 3388
PstNI CAGNNNCTG 2 cut(s) 2261, 2878
PsuI RGATCY 2 cut(s) 565, 1225
RsaI GTAC 5 cut(s) 837, 1050, 2074, 2709, 3129
RsaNI GTAC 5 cut(s) 836, 1049, 2073, 2708, 3128
RseI CAYNNNNRTG 3 cut(s) 1146, 1209, 2319
SacI GAGCTC 2 cut(s) 1326, 1818
SaqAI TTAA 5 cut(s) 780, 1179, 1922, 2721, 3434
Sau3AI GATC 9 cut(s) 292, 332, 565, 727, 796, 1225, 1729, 2880, 3442
Sau96I GGNCC 4 cut(s) 1217, 2207, 2802, 3380
ScaI AGTACT 1 cut(s) 1050
SduI GDGCHC 7 cut(s) 1326, 1513, 1681, 1744, 1818, 2332, 3293
SfcI CTRYAG 7 cut(s) 1021, 1236, 1575, 2891, 3384, 3411, 3418
SinI GGWCC 3 cut(s) 1217, 2207, 2802
SmiMI CAYNNNNRTG 3 cut(s) 1146, 1209, 2319
SmlI CTYRAG 5 cut(s) 779, 1166, 1504, 1616, 3497
SmoI CTYRAG 5 cut(s) 779, 1166, 1504, 1616, 3497
SpeI ACTAGT 1 cut(s) 662
SphI GCATGC 1 cut(s) 977
SspI AATATT 4 cut(s) 1934, 1956, 2052, 2931
SspMI CTAG 4 cut(s) 663, 1229, 1250, 3093
SstI GAGCTC 2 cut(s) 1326, 1818
StyI CCWWGG 2 cut(s) 2701, 2787
TaaI ACNGT 7 cut(s) 451, 2009, 2200, 3049, 3205, 3412, 3439
TaiI ACGT 2 cut(s) 841, 3574
TaqI TCGA 8 cut(s) 109, 799, 961, 1000, 1386, 1905, 2332, 3115
TatI WGTACW 1 cut(s) 1048
TauI GCSGC 8 cut(s) 122, 189, 267, 540, 1802, 2261, 2678, 2950
Tru1I TTAA 5 cut(s) 780, 1179, 1922, 2721, 3434
Tru9I TTAA 5 cut(s) 780, 1179, 1922, 2721, 3434
TscAI CASTG 5 cut(s) 2014, 2440, 2487, 2745, 3364
TseFI GTSAC 3 cut(s) 65, 2353, 2696
Tsp45I GTSAC 3 cut(s) 65, 2353, 2696
TspDTI ATGAA 7 cut(s) 254, 1058, 1617, 1621, 1748, 2259, 3188
TspGWI ACGGA 4 cut(s) 134, 528, 2638, 3443
TspRI CASTG 5 cut(s) 2014, 2440, 2487, 2745, 3364
Van91I CCANNNNNTGG 3 cut(s) 813, 2840, 3232
Vha464I CTTAAG 1 cut(s) 779
VpaK11BI GGWCC 3 cut(s) 1217, 2207, 2802
XapI RAATTY 8 cut(s) 892, 1014, 1065, 1097, 2034, 2626, 3058, 3317
XceI RCATGY 2 cut(s) 977, 2361
XcmI CCANNNNNNNNNTGG 1 cut(s) 305
XmiI GTMKAC 1 cut(s) 3414
XmnI GAANNNNTTC 1 cut(s) 1944
XspI CTAG 4 cut(s) 663, 1229, 1250, 3093
ZrmI AGTACT 1 cut(s) 1050
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.