Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004564

Physical Location & Seq

Genomic Coordinates Forward (+)

21743366 .. 21746061

Gene Structure 2696 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G53520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

ATGAAAGACTTTACAGATACAATATCGGAGTCGGAGTGCGACGATGAGATAAGTATAGTTCCACAAGTGGAACTAACGGTGCCCAAAACCGACGATCCAACTTCACCGACGGTTACGTTTAGGATGTGGGTTCTTGGCATAACCGCTTGTGTTCTCTTGTCATTTCTTAACCAGTTTTTCTGGTACAGAACCAATCCTTTGACCATCTCCTCTGTTTCGGCTCAGATTGCTGTTGTTCCCATTGGTCATCTCATGGCTAAAGTTCTTCCCACAAGGAGATTCTTCGAAGGGACGAGGTGGTCTTTCACGATGAATCCTGGTCCCTTTAGCACCAAGGAACATGTTCTTATAACTGTGTTTGCAAACTCAGGCTCTGGGGCTGTTTACGCTACTCATATTCTTAGTGCTGTTAAGCTTTATTACAAGAGAAGGCTTGATTTCTTACCCGCTTTGCTCGTTATGATCACCACTCAGGTATTGGGATTTGGTTGGGCTGGTTTGTATAGGAAACATTTAGTTGAGCCAGGTGAAATGTGGTGGCCAAGCAATCTCGTTCAAGTGTCTCTCTTCAGAGCATTGCATGAGAAAGAGAACAAATCGAAATGGGGAATTAGTCGAAATCAGTTCTTTGTCATCACTCTCATCACTAGCTTCTCCTATTATCTCCTACCTGGTTATCTCTTCACGGTCTTAACCACCGTCTCTTGGTTATGTTGGATTAGCCCTAAATCGATTCTAGTAAACCAGCTTGGTTCAGGGTCAGCAGGTCTTGGTATCGGTTCCTTTGGTCTGGACTGGTCAACCATCGCGTCATACCTTGGAAGTCCACTCGCTAGCCCATTCTTTGCCTCTGCAAATATTGCGGCCGGGTTCTTTCTTGTGATGTACGTAATCACACCTCTCTGTTACTATCTTGATTTGTACAACGCCAAAACCTTCCCAATCTACTCCGGTAAACTCTTTGTAGCCAGTGGGAAAGAATACAAAGTAACGAGCATCATCGATGCCAATTTCCGCCTGGATCGTCAGGCTTACGCAGAGACCGGACCAGTCCACATGAGCACTTTCTTTGCCGTGACCTATGGACTAGGTTTCGCGACCTTGTCTGCTAGTATTTTCCATGTCCTGATTTTCAACGGCAAAGATCTCTGGACTCAAACCAGAGGAGCGTTTGGAAAAAACAAGAAAATGGATATACATACAAAGATCATGAAGAGGAATTATAAAGAAGTTCCTCTCTGGTGGTTCCTTTCGATTTTCGCGGTGAATCTTGCAGTTATTGTCTTCATATGTATTTACTATAAGACACAGATTCAGCTTCCATGGTGGGGAGCTTTCTTGGCTTGTTTGATAGCTATCTTCTTCACTCCTCTCGTTGGTGTGATCATGGCCACTACTAACCAGGCTCCGGGTCTGAACATTATCACGGAGTACATAATTGGATATGCATATCCAGAGAGACCAGTTGCTAACATATGCTTCAAGACTTACGGATACATCAGCATGTCTCAATCTTTGACTTTCCTCTCTGATTTAAAGCTTGGAACTTACATGAAGATCCCACCAAGAACCATGTTCATGGCACAGGTTGTGGGCACTTTAGTTGCAGTTATCGCTTACGCAGGCACGGCTTGGTGGCTAATGGCTGAAATCCCAAATCTCTGCGACACTAATCTGCTTCCACCGGGAAGTCAATGGACTTGTCCATCGGATCGAGTCTTCTTCGACGCATCAGTGATTTGGGGACTAGTAGGACCAAGAAGAATGTTTGGTGATCTTGGAGAATACTCGAACATAAACTGGTTCTTCGTAGGAGGTGCAATAGCTCCAGCATTGGTATACTTAGCCTCAAGACTCTTCCCAAACAAGAAATGGATCTCAGACATTCACATCCCTGTTCTGATTGGAGCCACAGCTATAATGCCACCAGCTTCTGCGGTGAACTTCACGAGCTGGCTCGTTATGGCGTTTGTGTTTGGACATTTCGTGTTTAAGTACAGAAGAGAATGGTGGCAGCGATATAACTATGTTCTGTCTGGAGGAATGGATGCAGGAACTGGATTCATGTCAGTGCTTTTGTTTCTTGCGTTGCAACGTAGTGAGATTGCGATTGATTGGTGGGGAAATTCTGGAGAAGGTTGTCCTGTTGCTAAATGTCCAACTGCTAAAGGTGTTGTTGTTCATGGTTGTCCTGTTTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009987 GO:0015833 GO:0016020 GO:0016021 GO:0019953 GO:0022412 GO:0022414 GO:0022857 GO:0030154 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0032504 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048235 GO:0048609 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0051704 GO:0055046 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

733

Amino Acids

82.08

Weight (kDa)

9.06

Isoelectric Point (pI)

36.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	38 - 696	8.1e-166	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004564)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27730 AT5G53510 AT5G53520
fragaria_vesca	FvH4_7g32230
malus_domestica	MD07G1295600.v1.1
prunus_persica	Prupe.2G315100_v2.0.a1
pyrus_communis	pycom07g26830
rosa_chinensis	RchiOBHm_Chr1g0381901 RchiOBHm_Chr1g0381921
rosa_laevigata	RLG00000026200 RLG00000026201
rosa_multiflora	Rmu_co8241265.1_g000001 Rmu_co8483163.1_g000001 Rmu_sc0010238.1_g000007
rosa_roxburghii	Rroxscaffold_4G00278340 Rroxscaffold_4G00278350
rosa_rugosa	Rorug01G0432100 Rorug01G0432200
rosa_samantha	Rh1AG455200 Rh1AG455400 Rh1BG412400 Rh1BG412600 Rh1CG427100 Rh1CG427400 Rh1DG444700 Rh1DG444900
rosa_wichuraiana	Rw1G039710 Rw1G041370 Rw1G041380 Rw1G041470 Rw1G041480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	350, 1224
AasI	GACNNNNNNGTC	1 cut(s)	298
Acc36I	ACCTGC	1 cut(s)	755
AccB1I	GGYRCC	1 cut(s)	79
AccI	GTMKAC	1 cut(s)	1839
AccII	CGCG	3 cut(s)	809, 1097, 1262
AciI	CCGC	6 cut(s)	144, 447, 863, 1015, 1262, 1937
AclWI	GGATC	5 cut(s)	89, 1029, 1552, 1719, 1883
AcoI	YGGCCR	3 cut(s)	539, 864, 1389
AcsI	RAATTY	1 cut(s)	2125
AcuI	CTGAAG	1 cut(s)	553
AfaI	GTAC	5 cut(s)	185, 887, 923, 1433, 1997
AfiI	CCNNNNNNNGG	4 cut(s)	705, 1328, 1376, 1408
AflIII	ACRYGT	1 cut(s)	340
AgsI	TTSAA	3 cut(s)	557, 1135, 1483
AhlI	ACTAGT	1 cut(s)	1747
AjnI	CCWGG	5 cut(s)	316, 523, 670, 1017, 1401
Alw21I	GWGCWC	1 cut(s)	1064
Alw26I	GTCTC	5 cut(s)	567, 706, 1034, 1453, 1512
AlwI	GGATC	5 cut(s)	89, 1029, 1552, 1719, 1883
AlwNI	CAGNNNCTG	3 cut(s)	374, 1934, 2057
AoxI	GGCC	3 cut(s)	539, 864, 1389
ApeKI	GCWGC	1 cut(s)	2014
ApoI	RAATTY	1 cut(s)	2125
Asp700I	GAANNNNTTC	1 cut(s)	342
AspS9I	GGNCC	3 cut(s)	320, 1046, 1754
AsuC2I	CCSGG	3 cut(s)	868, 1410, 1686
AsuHPI	GGTGA	6 cut(s)	96, 457, 539, 1276, 1784, 1951
AsuII	TTCGAA	1 cut(s)	285
AsuNHI	GCTAGC	1 cut(s)	833
AvaII	GGWCC	3 cut(s)	320, 1046, 1754
BaeGI	GKGCMC	2 cut(s)	84, 1598
BalI	TGGCCA	2 cut(s)	541, 1391
BanI	GGYRCC	1 cut(s)	79
BauI	CACGAG	1 cut(s)	1948
BbsI	GAAGAC	2 cut(s)	1276, 1711
Bbv12I	GWGCWC	1 cut(s)	1064
BbvI	GCAGC	1 cut(s)	2026
BccI	CCATC	3 cut(s)	212, 812, 1714
BceAI	ACGGC	3 cut(s)	1058, 1153, 1644
BciT130I	CCWGG	5 cut(s)	318, 525, 672, 1019, 1403
BciVI	GTATCC	1 cut(s)	1487
BclI	TGATCA	2 cut(s)	462, 1383
BcnI	CCSGG	3 cut(s)	868, 1410, 1686
BcoDI	GTCTC	5 cut(s)	567, 706, 1034, 1453, 1512
BcuI	ACTAGT	1 cut(s)	1747
BfaI	CTAG	6 cut(s)	648, 737, 834, 1088, 1110, 1748
BfuAI	ACCTGC	1 cut(s)	755
BfuI	GTATCC	1 cut(s)	1487
BglII	AGATCT	1 cut(s)	1144
BisI	GCNGC	2 cut(s)	864, 2015
BlsI	GCNGC	2 cut(s)	865, 2016
Bme1390I	CCNGG	8 cut(s)	318, 525, 672, 868, 1019, 1403, 1410, 1686
Bme18I	GGWCC	3 cut(s)	320, 1046, 1754
BmgT120I	GGNCC	3 cut(s)	320, 1046, 1754
BmiI	GGNNCC	6 cut(s)	81, 322, 781, 1247, 1407, 1909
BmrFI	CCNGG	8 cut(s)	318, 525, 672, 868, 1019, 1403, 1410, 1686
BmsI	GCATC	4 cut(s)	994, 1005, 1739, 2038
BmtI	GCTAGC	1 cut(s)	837
BpiI	GAAGAC	2 cut(s)	1276, 1711
BpmI	CTGGAG	3 cut(s)	1812, 2058, 2151
Bpu14I	TTCGAA	1 cut(s)	285
BpuEI	CTTGAG	1 cut(s)	1834
BpuMI	CCSGG	3 cut(s)	868, 1410, 1686
Bsa29I	ATCGAT	2 cut(s)	731, 1002
BsaAI	YACGTR	1 cut(s)	889
BsaBI	GATNNNNATC	1 cut(s)	1355
BsaI	GGTCTC	2 cut(s)	1034, 1453
BsaJI	CCNNGG	3 cut(s)	333, 817, 1322
BsaWI	WCCGGW	2 cut(s)	950, 1043
BsaXI	ACNNNNNCTCC	2 cut(s)	20, 50
Bsc4I	CCNNNNNNNGG	4 cut(s)	705, 1328, 1376, 1408
Bse1I	ACTGG	7 cut(s)	172, 800, 969, 1049, 1463, 1805, 2062
Bse3DI	GCAATG	1 cut(s)	575
Bse8I	GATNNNNATC	1 cut(s)	1355
BseBI	CCWGG	5 cut(s)	318, 525, 672, 1019, 1403
BseCI	ATCGAT	2 cut(s)	731, 1002
BseDI	CCNNGG	3 cut(s)	333, 817, 1322
BseGI	GGATG	3 cut(s)	129, 1890, 2053
BseJI	GATNNNNATC	1 cut(s)	1355
BseLI	CCNNNNNNNGG	4 cut(s)	705, 1328, 1376, 1408
BseMI	GCAATG	1 cut(s)	575
BseMII	CTCAG	4 cut(s)	236, 381, 485, 1893
BseNI	ACTGG	7 cut(s)	172, 800, 969, 1049, 1463, 1805, 2062
BseRI	GAGGAG	3 cut(s)	199, 1179, 1359
BseSI	GKGCMC	2 cut(s)	84, 1598
BseX3I	CGGCCG	1 cut(s)	864
BseXI	GCAGC	1 cut(s)	2026
Bsh1236I	CGCG	3 cut(s)	809, 1097, 1262
Bsh1285I	CGRYCG	1 cut(s)	867
BshFI	GGCC	3 cut(s)	541, 866, 1391
BshNI	GGYRCC	1 cut(s)	79
BshVI	ATCGAT	2 cut(s)	731, 1002
BsiEI	CGRYCG	1 cut(s)	867
BsiHKAI	GWGCWC	1 cut(s)	1064
BsiSI	CCGG	5 cut(s)	867, 951, 1044, 1409, 1685
BslFI	GGGAC	3 cut(s)	304, 306, 1758
BslI	CCNNNNNNNGG	4 cut(s)	705, 1328, 1376, 1408
BsmAI	GTCTC	5 cut(s)	567, 706, 1034, 1453, 1512
BsmBI	CGTCTC	1 cut(s)	706
BsmFI	GGGAC	3 cut(s)	304, 306, 1758
BsnI	GGCC	3 cut(s)	541, 866, 1391
Bso31I	GGTCTC	2 cut(s)	1034, 1453
Bsp119I	TTCGAA	1 cut(s)	285
Bsp1286I	GDGCHC	3 cut(s)	84, 1064, 1598
Bsp1407I	TGTACA	1 cut(s)	921
Bsp19I	CCATGG	1 cut(s)	1322
Bsp68I	TCGCGA	1 cut(s)	1097
BspACI	CCGC	6 cut(s)	144, 447, 863, 1015, 1262, 1937
BspANI	GGCC	3 cut(s)	541, 866, 1391
BspCNI	CTCAG	4 cut(s)	235, 380, 484, 1892
BspDI	ATCGAT	2 cut(s)	731, 1002
BspFNI	CGCG	3 cut(s)	809, 1097, 1262
BspHI	TCATGA	1 cut(s)	1209
BspLI	GGNNCC	6 cut(s)	81, 322, 781, 1247, 1407, 1909
BspMI	ACCTGC	1 cut(s)	755
BspOI	GCTAGC	1 cut(s)	837
BspPI	GGATC	5 cut(s)	89, 1029, 1552, 1719, 1883
BspT104I	TTCGAA	1 cut(s)	285
BspT107I	GGYRCC	1 cut(s)	79
BspTNI	GGTCTC	2 cut(s)	1034, 1453
BsrDI	GCAATG	1 cut(s)	575
BsrGI	TGTACA	1 cut(s)	921
BsrI	ACTGG	7 cut(s)	172, 800, 969, 1049, 1463, 1805, 2062
BssECI	CCNNGG	3 cut(s)	333, 817, 1322
BssNAI	GTATAC	1 cut(s)	1840
BssSI	CACGAG	1 cut(s)	1948
BssT1I	CCWWGG	3 cut(s)	333, 817, 1322
Bst1107I	GTATAC	1 cut(s)	1840
Bst2BI	CACGAG	1 cut(s)	1948
Bst2UI	CCWGG	5 cut(s)	318, 525, 672, 1019, 1403
Bst4CI	ACNGT	5 cut(s)	79, 112, 355, 688, 700
Bst6I	CTCTTC	5 cut(s)	572, 686, 1208, 1862, 1996
BstAPI	GCANNNNNTGC	1 cut(s)	860
BstAUI	TGTACA	1 cut(s)	921
BstBAI	YACGTR	1 cut(s)	889
BstBI	TTCGAA	1 cut(s)	285
BstC8I	GCNNGC	3 cut(s)	835, 1624, 1955
BstDEI	CTNAG	6 cut(s)	222, 367, 401, 471, 1843, 1879
BstDSI	CCRYGG	1 cut(s)	1322
BstF5I	GGATG	3 cut(s)	129, 1890, 2053
BstFNI	CGCG	3 cut(s)	809, 1097, 1262
BstMAI	GTCTC	5 cut(s)	567, 706, 1034, 1453, 1512
BstMCI	CGRYCG	1 cut(s)	867
BstMWI	GCNNNNNNNGC	6 cut(s)	227, 386, 860, 1340, 1613, 1628
BstNI	CCWGG	5 cut(s)	318, 525, 672, 1019, 1403
BstNSI	RCATGY	2 cut(s)	344, 1507
BstSCI	CCNGG	8 cut(s)	316, 523, 670, 866, 1017, 1401, 1408, 1684
BstSLI	GKGCMC	2 cut(s)	84, 1598
BstSNI	TACGTA	1 cut(s)	889
BstUI	CGCG	3 cut(s)	809, 1097, 1262
BstV1I	GCAGC	1 cut(s)	2026
BstV2I	GAAGAC	2 cut(s)	1276, 1711
BstX2I	RGATCY	3 cut(s)	1144, 1557, 1875
BstXI	CCANNNNNNTGG	1 cut(s)	1579
BstYI	RGATCY	3 cut(s)	1144, 1557, 1875
BstZ17I	GTATAC	1 cut(s)	1840
BstZI	CGGCCG	1 cut(s)	864
Bsu15I	ATCGAT	2 cut(s)	731, 1002
BsuI	GTATCC	1 cut(s)	1487
BsuRI	GGCC	3 cut(s)	541, 866, 1391
BsuTUI	ATCGAT	2 cut(s)	731, 1002
BtgI	CCRYGG	1 cut(s)	1322
BtgZI	GCGATG	1 cut(s)	790
BtsCI	GGATG	3 cut(s)	129, 1890, 2053
BtsIMutI	CAGTG	3 cut(s)	976, 1740, 2076
BtuMI	TCGCGA	1 cut(s)	1097
BveI	ACCTGC	1 cut(s)	755
Cac8I	GCNNGC	3 cut(s)	835, 1624, 1955
CaiI	CAGNNNCTG	3 cut(s)	374, 1934, 2057
CciI	TCATGA	1 cut(s)	1209
Cfr13I	GGNCC	3 cut(s)	320, 1046, 1754
ClaI	ATCGAT	2 cut(s)	731, 1002
CseI	GACGC	2 cut(s)	798, 1736
CsiI	ACCWGGT	1 cut(s)	670
Csp6I	GTAC	5 cut(s)	184, 886, 922, 1432, 1996
CviQI	GTAC	5 cut(s)	184, 886, 922, 1432, 1996
DdeI	CTNAG	6 cut(s)	222, 367, 401, 471, 1843, 1879
DraI	TTTAAA	1 cut(s)	1536
DrdI	GACNNNNNNGTC	1 cut(s)	298
DseDI	GACNNNNNNGTC	1 cut(s)	298
EaeI	YGGCCR	3 cut(s)	539, 864, 1389
EagI	CGGCCG	1 cut(s)	864
Eam1104I	CTCTTC	5 cut(s)	572, 686, 1208, 1862, 1996
EarI	CTCTTC	5 cut(s)	572, 686, 1208, 1862, 1996
EciI	GGCGGA	1 cut(s)	1004
EclXI	CGGCCG	1 cut(s)	864
Eco105I	TACGTA	1 cut(s)	889
Eco130I	CCWWGG	3 cut(s)	333, 817, 1322
Eco31I	GGTCTC	2 cut(s)	1034, 1453
Eco47I	GGWCC	3 cut(s)	320, 1046, 1754
Eco52I	CGGCCG	1 cut(s)	864
Eco57I	CTGAAG	1 cut(s)	553
EcoRII	CCWGG	5 cut(s)	316, 523, 670, 1017, 1401
EcoT14I	CCWWGG	3 cut(s)	333, 817, 1322
EcoT22I	ATGCAT	1 cut(s)	1450
ErhI	CCWWGG	3 cut(s)	333, 817, 1322
Esp3I	CGTCTC	1 cut(s)	706
FaqI	GGGAC	3 cut(s)	304, 306, 1758
FauI	CCCGC	1 cut(s)	454
FauNDI	CATATG	2 cut(s)	1289, 1475
FbaI	TGATCA	2 cut(s)	462, 1383
FblI	GTMKAC	1 cut(s)	1839
Fnu4HI	GCNGC	2 cut(s)	864, 2015
FokI	GGATG	3 cut(s)	136, 1877, 2060
Fsp4HI	GCNGC	2 cut(s)	864, 2015
FspBI	CTAG	6 cut(s)	648, 737, 834, 1088, 1110, 1748
GluI	GCNGC	2 cut(s)	864, 2015
GsuI	CTGGAG	3 cut(s)	1812, 2058, 2151
HaeIII	GGCC	3 cut(s)	541, 866, 1391
HapII	CCGG	5 cut(s)	867, 951, 1044, 1409, 1685
HgaI	GACGC	2 cut(s)	798, 1736
HincII	GTYRAC	1 cut(s)	801
HindII	GTYRAC	1 cut(s)	801
HindIII	AAGCTT	2 cut(s)	413, 1538
HpaII	CCGG	5 cut(s)	867, 951, 1044, 1409, 1685
HphI	GGTGA	6 cut(s)	96, 457, 539, 1276, 1784, 1951
Hpy166II	GTNNAC	8 cut(s)	385, 742, 801, 827, 956, 1054, 1840, 1942
Hpy188I	TCNGA	9 cut(s)	28, 34, 225, 572, 1416, 1531, 1711, 1882, 1902
Hpy8I	GTNNAC	8 cut(s)	385, 742, 801, 827, 956, 1054, 1840, 1942
Hpy99I	CGWCG	4 cut(s)	44, 95, 112, 1730
HpyAV	CCTTC	4 cut(s)	281, 423, 946, 2129
HpyCH4III	ACNGT	5 cut(s)	79, 112, 355, 688, 700
HpyCH4IV	ACGT	3 cut(s)	116, 888, 2095
HpyCH4V	TGCA	9 cut(s)	362, 580, 854, 1274, 1448, 1607, 1820, 2051, 2092
HpyF10VI	GCNNNNNNNGC	6 cut(s)	227, 386, 860, 1340, 1613, 1628
HpyF3I	CTNAG	6 cut(s)	222, 367, 401, 471, 1843, 1879
HpySE526I	ACGT	3 cut(s)	116, 888, 2095
Ksp22I	TGATCA	2 cut(s)	462, 1383
LmnI	GCTCC	5 cut(s)	1166, 1331, 1411, 1831, 1907
Lsp1109I	GCAGC	1 cut(s)	2026
LweI	GCATC	4 cut(s)	994, 1005, 1739, 2038
MabI	ACCWGGT	1 cut(s)	670
MaeI	CTAG	6 cut(s)	648, 737, 834, 1088, 1110, 1748
MaeII	ACGT	3 cut(s)	116, 888, 2095
MaeIII	GTNAC	4 cut(s)	112, 905, 988, 1075
MflI	RGATCY	3 cut(s)	1144, 1557, 1875
MhlI	GDGCHC	3 cut(s)	84, 1064, 1598
MlsI	TGGCCA	2 cut(s)	541, 1391
MluCI	AATT	5 cut(s)	609, 1009, 1219, 1437, 2125
MluNI	TGGCCA	2 cut(s)	541, 1391
MlyI	GAGTC	4 cut(s)	38, 1147, 1725, 1848
MmeI	TCCRAC	4 cut(s)	12, 122, 695, 2183
Mox20I	TGGCCA	2 cut(s)	541, 1391
Mph1103I	ATGCAT	1 cut(s)	1450
MroXI	GAANNNNTTC	1 cut(s)	342
MscI	TGGCCA	2 cut(s)	541, 1391
MseI	TTAA	5 cut(s)	168, 411, 692, 1535, 1992
MslI	CAYNNNNRTG	3 cut(s)	1502, 1577, 2069
Msp20I	TGGCCA	2 cut(s)	541, 1391
MspI	CCGG	5 cut(s)	867, 951, 1044, 1409, 1685
MspR9I	CCNGG	8 cut(s)	318, 525, 672, 868, 1019, 1403, 1410, 1686
MvaI	CCWGG	5 cut(s)	318, 525, 672, 1019, 1403
MvnI	CGCG	3 cut(s)	809, 1097, 1262
MwoI	GCNNNNNNNGC	6 cut(s)	227, 386, 860, 1340, 1613, 1628
NciI	CCSGG	3 cut(s)	868, 1410, 1686
NcoI	CCATGG	1 cut(s)	1322
NdeI	CATATG	2 cut(s)	1289, 1475
NheI	GCTAGC	1 cut(s)	833
NlaIV	GGNNCC	6 cut(s)	81, 322, 781, 1247, 1407, 1909
NmuCI	GTSAC	1 cut(s)	1075
NruI	TCGCGA	1 cut(s)	1097
NsiI	ATGCAT	1 cut(s)	1450
NspI	RCATGY	2 cut(s)	344, 1507
NspV	TTCGAA	1 cut(s)	285
PagI	TCATGA	1 cut(s)	1209
PciI	ACATGT	1 cut(s)	340
PdmI	GAANNNNTTC	1 cut(s)	342
PfeI	GAWTC	6 cut(s)	279, 313, 733, 1267, 1312, 2061
PflFI	GACNNNGTC	1 cut(s)	1102
PkrI	GCNGC	2 cut(s)	865, 2016
PleI	GAGTC	4 cut(s)	37, 1147, 1724, 1848
PpsI	GAGTC	4 cut(s)	37, 1147, 1724, 1848
Ppu21I	YACGTR	1 cut(s)	889
PscI	ACATGT	1 cut(s)	340
PsiI	TTATAA	2 cut(s)	350, 1224
Psp6I	CCWGG	5 cut(s)	316, 523, 670, 1017, 1401
PspGI	CCWGG	5 cut(s)	316, 523, 670, 1017, 1401
PspN4I	GGNNCC	6 cut(s)	81, 322, 781, 1247, 1407, 1909
PspPI	GGNCC	3 cut(s)	320, 1046, 1754
PstNI	CAGNNNCTG	3 cut(s)	374, 1934, 2057
PsuI	RGATCY	3 cut(s)	1144, 1557, 1875
PsyI	GACNNNGTC	1 cut(s)	1102
RruI	TCGCGA	1 cut(s)	1097
RsaI	GTAC	5 cut(s)	185, 887, 923, 1433, 1997
RsaNI	GTAC	5 cut(s)	184, 886, 922, 1432, 1996
RseI	CAYNNNNRTG	3 cut(s)	1502, 1577, 2069
SaqAI	TTAA	5 cut(s)	168, 411, 692, 1535, 1992
SatI	GCNGC	2 cut(s)	864, 2015
Sau96I	GGNCC	3 cut(s)	320, 1046, 1754
SchI	GAGTC	4 cut(s)	38, 1147, 1725, 1848
ScrFI	CCNGG	8 cut(s)	318, 525, 672, 868, 1019, 1403, 1410, 1686
SduI	GDGCHC	3 cut(s)	84, 1064, 1598
SexAI	ACCWGGT	1 cut(s)	670
SfaNI	GCATC	4 cut(s)	994, 1005, 1739, 2038
SfuI	TTCGAA	1 cut(s)	285
SinI	GGWCC	3 cut(s)	320, 1046, 1754
SmiMI	CAYNNNNRTG	3 cut(s)	1502, 1577, 2069
SmlI	CTYRAG	1 cut(s)	1849
SmoI	CTYRAG	1 cut(s)	1849
SnaBI	TACGTA	1 cut(s)	889
SpeI	ACTAGT	1 cut(s)	1747
Sse9I	AATT	5 cut(s)	609, 1009, 1219, 1437, 2125
SsiI	CCGC	6 cut(s)	144, 447, 863, 1015, 1262, 1937
SspI	AATATT	1 cut(s)	859
SspMI	CTAG	6 cut(s)	648, 737, 834, 1088, 1110, 1748
StyD4I	CCNGG	8 cut(s)	316, 523, 670, 866, 1017, 1401, 1408, 1684
StyI	CCWWGG	3 cut(s)	333, 817, 1322
TaaI	ACNGT	5 cut(s)	79, 112, 355, 688, 700
TaiI	ACGT	3 cut(s)	119, 891, 2098
TaqI	TCGA	9 cut(s)	285, 599, 616, 731, 1002, 1253, 1714, 1725, 1790
TasI	AATT	5 cut(s)	609, 1009, 1219, 1437, 2125
TatI	WGTACW	3 cut(s)	921, 1431, 1995
TauI	GCSGC	1 cut(s)	866
TfiI	GAWTC	6 cut(s)	279, 313, 733, 1267, 1312, 2061
Tru1I	TTAA	5 cut(s)	168, 411, 692, 1535, 1992
Tru9I	TTAA	5 cut(s)	168, 411, 692, 1535, 1992
TscAI	CASTG	3 cut(s)	976, 1740, 2076
TseFI	GTSAC	1 cut(s)	1075
TseI	GCWGC	1 cut(s)	2014
Tsp45I	GTSAC	1 cut(s)	1075
TspDTI	ATGAA	8 cut(s)	17, 326, 1226, 1276, 1567, 1568, 2053, 2171
TspGWI	ACGGA	2 cut(s)	1442, 1506
TspRI	CASTG	3 cut(s)	976, 1740, 2076
Tth111I	GACNNNGTC	1 cut(s)	1102
VpaK11BI	GGWCC	3 cut(s)	320, 1046, 1754
XapI	RAATTY	1 cut(s)	2125
XceI	RCATGY	2 cut(s)	344, 1507
XcmI	CCANNNNNNNNNTGG	4 cut(s)	475, 531, 1015, 1869
XmiI	GTMKAC	1 cut(s)	1839
XmnI	GAANNNNTTC	1 cut(s)	342
XspI	CTAG	6 cut(s)	648, 737, 834, 1088, 1110, 1748
Zsp2I	ATGCAT	1 cut(s)	1450

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.