Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0004564

Physical Location & Seq

Genomic Coordinates Reverse (-)

1191014 .. 1193526

Gene Structure 2513 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000026200

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGGAGATAGATAATAGTAGTGCTGTAAAGATGGAGCAGGTCCAGCAGGAAGATGAGCGCTCTTCCATTGAGCAAGTGGAGTTGACAGTGCCGAAAACCGATGACCCCACGTTGCCGGTGCTCACATTCCGAACGTGGGTTCTGGTCGGACATTTCATGGCGAGGTGCTGCCCACGCGCCGTTTTTTCCAAGATCTTCTACAAGAGGAAGCTCACTTTTCTTCCTGCCTTTATTGTTATGCTCACCACTCAGGTGTTGGGGTTTGGTTGGGCTGGAATTTTCAGAAAATATCTGGTTGAGCCAGAGAAGATGTGGTGGCCCGTCGTTCTGGTTCAGGTCTCATTGTTCAGTGCTCTGCATGAGAAGAGCAAAAGGACTAAAGGAAGCATGACTCGTACCCAGTTCTTCCTCCTAGTGATGATTGCCAGTTTTGCTTACTATATCTTCCCTGGCTATCTTTTCATCATGCTAACATCTGTCTCTTGGGTGTGTTGGATTCGACCCAATTCTATTCTAGTTAACCAGCTGGGTTCTGGCATGAAAGGCCTTGGAATCGGTTCTTTTGGGATTGAGTGGTCTGCTATTGCAGTATACCTTGGTACTCCTCTGGCTAGCCCGTGGTTAGCCACAGCCAACATTGCTGTTGGATTTTTCTTTATCATGTATGTGATGACACCCATCACTTACTGGTCTAATATCTACAGCGCCAAGACATTCCAAATATTTTCTAGCAAATTGTTCATGGCTAATGGTTCAAGATACGAGGTCCTCGATATCATTGATTCCAGGTTTCAACTTGATCATGGCGAATATGCAAAGAAGGGGCCTCTGCATATGAGCACCTTTTTTGCTTTTACTTATGGTCTTGAATTTGCCACTCTTTCTGCTATGGATATACTGGACTCGTTTCGTGGAAATAAGAAAAAGGATGTCCATGCAAGGCTTATGAAGAGTTACAAATCAGTGCCAACATTGTGGTTTATCCTCATCCTTGTGATCAATATTGCTCTTATCCTGTTTGCTTGTGTGTATTACAAGGAGTCACTTCAACTGCCTTGGTGGGGTGCATTGCTTGCTTTGCGTTCACGTACCCAATTGCAACCAGGTTTGAATATTATCACAGAATATGTGATAGTATACCTTTATCCTGAGCGCCCTGTAGCTAACATGTGCTTCAAAGTGTATGGTTACACAAGTATGATGCAAGGTCTAAATTTTGTGTCGGATTTTAAGCTCGGTCACTACATGCATGAAGATTCCACCAAGAGCAATGTTCACAGCACAGATGGTAGGAACTGTTGTAGCAGTGGTTGTATACCAGTGTACATCATGGTGGCTGATGGCAGAGATTCCCTGCTGCCACCGGACAGCCCTTGGACTTGTCCAACGGACCGCGTGTTCTTTGATGCGTCTGTTATCTGGGGTCTTGTTGGACCCCGCAGAATTTTTGGAAACCTCAGTGAATACAGTAACATCAACTGGTTTTTCCTTGGAGGCGCCATTGCCCCGGTGCTTGTTTGGCTTGCACACAGGATTTTTCCCAAACAAAAATGGATTCTTGCTGTTAACATGCCTGTCTTGCTAGGTGCCATGGCAATGATGCCCCCTGCCACTGCTTTGAACTTTACGAGTTGGATATTTGTGGCATTTTTTTCAGGTTTTGTTGTATTCAGGTACCGGCAAGATTTGTGGAAGAAGTATAACTATGTCGCCTCTGGTGCTCTCGAGGCCGGAACTGCCTTTGTTACGATATTGGTGTTCATTACCTTGCAGTCCCAGAATATTGAACTCGACTGGTGGGGGAACAAAGGAGAGCTCTGCCCCCTGGCTACATGCCCTACTGCAAAAGGGGTTGTCATTGCTGGCTGCCCGGTCCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009987 GO:0015833 GO:0016020 GO:0016021 GO:0019953 GO:0022412 GO:0022414 GO:0022857 GO:0030154 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0032504 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048235 GO:0048609 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0051704 GO:0055046 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

627

Amino Acids

70.98

Weight (kDa)

9.05

Isoelectric Point (pI)

43.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	66 - 588	4.5e-103	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004564)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27730 AT5G53510 AT5G53520
fragaria_vesca	FvH4_7g32230
malus_domestica	MD07G1295600.v1.1
prunus_persica	Prupe.2G315100_v2.0.a1
pyrus_communis	pycom07g26830
rosa_chinensis	RchiOBHm_Chr1g0381901 RchiOBHm_Chr1g0381921
rosa_laevigata	RLG00000026200 RLG00000026201
rosa_multiflora	Rmu_co8241265.1_g000001 Rmu_co8483163.1_g000001 Rmu_sc0010238.1_g000007
rosa_roxburghii	Rroxscaffold_4G00278340 Rroxscaffold_4G00278350
rosa_rugosa	Rorug01G0432100 Rorug01G0432200
rosa_samantha	Rh1AG455200 Rh1AG455400 Rh1BG412400 Rh1BG412600 Rh1CG427100 Rh1CG427400 Rh1DG444700 Rh1DG444900
rosa_wichuraiana	Rw1G039710 Rw1G041370 Rw1G041380 Rw1G041470 Rw1G041480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	28
Acc65I	GGTACC	1 cut(s)	1674
AccB1I	GGYRCC	3 cut(s)	1496, 1586, 1674
AccI	GTMKAC	3 cut(s)	591, 1137, 1315
AccII	CGCG	2 cut(s)	177, 1395
AciI	CCGC	2 cut(s)	1393, 1438
AcsI	RAATTY	4 cut(s)	276, 869, 1213, 1443
AcyI	GRCGYC	1 cut(s)	1497
AfaI	GTAC	5 cut(s)	397, 601, 1090, 1325, 1676
AfeI	AGCGCT	1 cut(s)	59
AfiI	CCNNNNNNNGG	2 cut(s)	136, 1061
AflIII	ACRYGT	1 cut(s)	1167
AgsI	TTSAA	8 cut(s)	756, 794, 869, 1049, 1111, 1177, 1621, 1787
AjnI	CCWGG	4 cut(s)	448, 785, 1102, 1824
AleI	CACNNNNGTG	1 cut(s)	251
AloI	GAACNNNNNNTCC	2 cut(s)	1382, 1414
AluBI	AGCT	5 cut(s)	211, 526, 1163, 1234, 1816
AluI	AGCT	5 cut(s)	211, 526, 1163, 1234, 1816
Alw21I	GWGCWC	5 cut(s)	123, 355, 842, 1723, 1818
Alw26I	GTCTC	2 cut(s)	343, 484
Ama87I	CYCGRG	1 cut(s)	1724
Aor51HI	AGCGCT	1 cut(s)	59
AoxI	GGCC	4 cut(s)	317, 544, 824, 1728
ApeKI	GCWGC	3 cut(s)	168, 1357, 1866
ApoI	RAATTY	4 cut(s)	276, 869, 1213, 1443
Asp700I	GAANNNNTTC	1 cut(s)	556
Asp718I	GGTACC	1 cut(s)	1674
AspLEI	GCGC	5 cut(s)	60, 179, 707, 1155, 1499
AspS9I	GGNCC	7 cut(s)	40, 318, 766, 824, 1390, 1433, 1873
AsuC2I	CCSGG	2 cut(s)	1508, 1871
AsuHPI	GGTGA	1 cut(s)	235
AsuNHI	GCTAGC	1 cut(s)	611
AvaI	CYCGRG	1 cut(s)	1724
AvaII	GGWCC	5 cut(s)	40, 766, 1390, 1433, 1873
BanI	GGYRCC	3 cut(s)	1496, 1586, 1674
BanII	GRGCYC	1 cut(s)	1818
Bbv12I	GWGCWC	5 cut(s)	123, 355, 842, 1723, 1818
BbvI	GCAGC	3 cut(s)	155, 1344, 1853
BccI	CCATC	4 cut(s)	25, 686, 1280, 1334
BceAI	ACGGC	1 cut(s)	164
BciT130I	CCWGG	4 cut(s)	450, 787, 1104, 1826
BclI	TGATCA	2 cut(s)	799, 996
BcnI	CCSGG	2 cut(s)	1508, 1871
BcoDI	GTCTC	2 cut(s)	343, 484
BfaI	CTAG	6 cut(s)	413, 515, 612, 729, 1583, 1879
BfmI	CTRYAG	2 cut(s)	700, 1158
BfoI	RGCGCY	4 cut(s)	61, 708, 1156, 1500
BfuAI	ACCTGC	1 cut(s)	28
BglII	AGATCT	1 cut(s)	192
BisI	GCNGC	3 cut(s)	169, 1358, 1867
BlsI	GCNGC	3 cut(s)	170, 1359, 1868
Bme1390I	CCNGG	6 cut(s)	450, 787, 1104, 1508, 1826, 1871
Bme18I	GGWCC	5 cut(s)	40, 766, 1390, 1433, 1873
BmeT110I	CYCGRG	1 cut(s)	1724
BmgT120I	GGNCC	7 cut(s)	40, 318, 766, 824, 1390, 1433, 1873
BmiI	GGNNCC	5 cut(s)	825, 1435, 1498, 1588, 1676
BmrFI	CCNGG	6 cut(s)	450, 787, 1104, 1508, 1826, 1871
BmrI	ACTGGG	1 cut(s)	394
BmsI	GCATC	3 cut(s)	1191, 1396, 1590
BmtI	GCTAGC	1 cut(s)	615
BmuI	ACTGGG	1 cut(s)	394
Bpu10I	CCTNAGC	1 cut(s)	1149
BpuMI	CCSGG	2 cut(s)	1508, 1871
BsaAI	YACGTR	1 cut(s)	1088
BsaHI	GRCGYC	1 cut(s)	1497
BsaI	GGTCTC	1 cut(s)	343
BsaWI	WCCGGW	1 cut(s)	1363
Bsc4I	CCNNNNNNNGG	2 cut(s)	136, 1061
Bse118I	RCCGGY	2 cut(s)	115, 1677
Bse1I	ACTGG	7 cut(s)	400, 426, 692, 903, 1319, 1484, 1799
Bse3DI	GCAATG	6 cut(s)	636, 1067, 1276, 1500, 1602, 1857
BseBI	CCWGG	4 cut(s)	450, 787, 1104, 1826
BseGI	GGATG	2 cut(s)	934, 987
BseLI	CCNNNNNNNGG	2 cut(s)	136, 1061
BseMI	GCAATG	6 cut(s)	636, 1067, 1276, 1500, 1602, 1857
BseMII	CTCAG	3 cut(s)	263, 1140, 1471
BseNI	ACTGG	7 cut(s)	400, 426, 692, 903, 1319, 1484, 1799
BseRI	GAGGAG	1 cut(s)	594
BseXI	GCAGC	3 cut(s)	155, 1344, 1853
BseYI	CCCAGC	1 cut(s)	526
Bsh1236I	CGCG	2 cut(s)	177, 1395
BshFI	GGCC	4 cut(s)	319, 546, 826, 1730
BshNI	GGYRCC	3 cut(s)	1496, 1586, 1674
BsiHKAI	GWGCWC	5 cut(s)	123, 355, 842, 1723, 1818
BsiHKCI	CYCGRG	1 cut(s)	1724
BsiSI	CCGG	6 cut(s)	116, 1364, 1508, 1678, 1731, 1871
BslFI	GGGAC	1 cut(s)	1759
BslI	CCNNNNNNNGG	2 cut(s)	136, 1061
BsmAI	GTCTC	2 cut(s)	343, 484
BsmFI	GGGAC	1 cut(s)	1759
BsnI	GGCC	4 cut(s)	319, 546, 826, 1730
Bso31I	GGTCTC	1 cut(s)	343
BsoBI	CYCGRG	1 cut(s)	1724
Bsp1286I	GDGCHC	5 cut(s)	123, 355, 842, 1723, 1818
Bsp1407I	TGTACA	1 cut(s)	1323
Bsp143I	GATC	3 cut(s)	192, 799, 996
Bsp19I	CCATGG	1 cut(s)	1590
BspACI	CCGC	2 cut(s)	1393, 1438
BspANI	GGCC	4 cut(s)	319, 546, 826, 1730
BspCNI	CTCAG	3 cut(s)	262, 1141, 1470
BspFNI	CGCG	2 cut(s)	177, 1395
BspLI	GGNNCC	5 cut(s)	825, 1435, 1498, 1588, 1676
BspMI	ACCTGC	1 cut(s)	28
BspOI	GCTAGC	1 cut(s)	615
BspQI	GCTCTTC	2 cut(s)	67, 359
BspT107I	GGYRCC	3 cut(s)	1496, 1586, 1674
BspTNI	GGTCTC	1 cut(s)	343
BsrDI	GCAATG	6 cut(s)	636, 1067, 1276, 1500, 1602, 1857
BsrFI	RCCGGY	2 cut(s)	115, 1677
BsrGI	TGTACA	1 cut(s)	1323
BsrI	ACTGG	7 cut(s)	400, 426, 692, 903, 1319, 1484, 1799
BssAI	RCCGGY	2 cut(s)	115, 1677
BssMI	GATC	3 cut(s)	192, 799, 996
BssNAI	GTATAC	3 cut(s)	592, 1138, 1316
BssNI	GRCGYC	1 cut(s)	1497
BssT1I	CCWWGG	6 cut(s)	547, 595, 1055, 1373, 1489, 1590
Bst1107I	GTATAC	3 cut(s)	592, 1138, 1316
Bst2UI	CCWGG	4 cut(s)	450, 787, 1104, 1826
Bst4CI	ACNGT	3 cut(s)	88, 1298, 1469
Bst6I	CTCTTC	3 cut(s)	67, 359, 944
BstACI	GRCGYC	1 cut(s)	1497
BstAPI	GCANNNNNTGC	1 cut(s)	1073
BstAUI	TGTACA	1 cut(s)	1323
BstBAI	YACGTR	1 cut(s)	1088
BstC8I	GCNNGC	4 cut(s)	613, 1074, 1524, 1864
BstDEI	CTNAG	3 cut(s)	249, 1149, 1457
BstDSI	CCRYGG	2 cut(s)	617, 1590
BstF5I	GGATG	2 cut(s)	934, 987
BstFNI	CGCG	2 cut(s)	177, 1395
BstH2I	RGCGCY	4 cut(s)	61, 708, 1156, 1500
BstHHI	GCGC	5 cut(s)	60, 179, 707, 1155, 1499
BstKTI	GATC	3 cut(s)	195, 802, 999
BstMAI	GTCTC	2 cut(s)	343, 484
BstMBI	GATC	3 cut(s)	192, 799, 996
BstNI	CCWGG	4 cut(s)	450, 787, 1104, 1826
BstNSI	RCATGY	4 cut(s)	1171, 1249, 1573, 1836
BstSCI	CCNGG	6 cut(s)	448, 785, 1102, 1506, 1824, 1869
BstSFI	CTRYAG	2 cut(s)	700, 1158
BstUI	CGCG	2 cut(s)	177, 1395
BstV1I	GCAGC	3 cut(s)	155, 1344, 1853
BstX2I	RGATCY	1 cut(s)	192
BstXI	CCANNNNNNTGG	1 cut(s)	975
BstYI	RGATCY	1 cut(s)	192
BstZ17I	GTATAC	3 cut(s)	592, 1138, 1316
BsuRI	GGCC	4 cut(s)	319, 546, 826, 1730
BtgI	CCRYGG	2 cut(s)	617, 1590
BtsCI	GGATG	2 cut(s)	934, 987
BtsI	GCAGTG	2 cut(s)	1312, 1611
BtsIMutI	CAGTG	7 cut(s)	93, 355, 969, 1312, 1326, 1465, 1611
BveI	ACCTGC	1 cut(s)	28
Cac8I	GCNNGC	4 cut(s)	613, 1074, 1524, 1864
CfoI	GCGC	5 cut(s)	60, 179, 707, 1155, 1499
Cfr10I	RCCGGY	2 cut(s)	115, 1677
Cfr13I	GGNCC	7 cut(s)	40, 318, 766, 824, 1390, 1433, 1873
CpoI	CGGWCCG	1 cut(s)	1390
CseI	GACGC	1 cut(s)	1398
CsiI	ACCWGGT	1 cut(s)	1102
Csp6I	GTAC	5 cut(s)	396, 600, 1089, 1324, 1675
CspCI	CAANNNNNGTGG	2 cut(s)	1670, 1705
CspI	CGGWCCG	1 cut(s)	1390
CviQI	GTAC	5 cut(s)	396, 600, 1089, 1324, 1675
DdeI	CTNAG	3 cut(s)	249, 1149, 1457
DinI	GGCGCC	1 cut(s)	1498
DpnI	GATC	3 cut(s)	194, 801, 998
DpnII	GATC	3 cut(s)	192, 799, 996
Eam1104I	CTCTTC	3 cut(s)	67, 359, 944
EarI	CTCTTC	3 cut(s)	67, 359, 944
Ecl136II	GAGCTC	1 cut(s)	1816
Eco130I	CCWWGG	6 cut(s)	547, 595, 1055, 1373, 1489, 1590
Eco147I	AGGCCT	1 cut(s)	546
Eco24I	GRGCYC	1 cut(s)	1818
Eco31I	GGTCTC	1 cut(s)	343
Eco32I	GATATC	1 cut(s)	775
Eco47I	GGWCC	5 cut(s)	40, 766, 1390, 1433, 1873
Eco47III	AGCGCT	1 cut(s)	59
Eco53kI	GAGCTC	1 cut(s)	1816
Eco88I	CYCGRG	1 cut(s)	1724
EcoICRI	GAGCTC	1 cut(s)	1816
EcoO109I	RGGNCCY	2 cut(s)	766, 824
EcoRII	CCWGG	4 cut(s)	448, 785, 1102, 1824
EcoRV	GATATC	1 cut(s)	775
EcoT14I	CCWWGG	6 cut(s)	547, 595, 1055, 1373, 1489, 1590
EcoT22I	ATGCAT	1 cut(s)	1251
EcoT38I	GRGCYC	1 cut(s)	1818
EgeI	GGCGCC	1 cut(s)	1498
EheI	GGCGCC	1 cut(s)	1498
ErhI	CCWWGG	6 cut(s)	547, 595, 1055, 1373, 1489, 1590
FaqI	GGGAC	1 cut(s)	1759
FauI	CCCGC	1 cut(s)	1445
FauNDI	CATATG	1 cut(s)	834
FbaI	TGATCA	2 cut(s)	799, 996
FblI	GTMKAC	3 cut(s)	591, 1137, 1315
Fnu4HI	GCNGC	3 cut(s)	169, 1358, 1867
FokI	GGATG	2 cut(s)	941, 974
FriOI	GRGCYC	1 cut(s)	1818
Fsp4HI	GCNGC	3 cut(s)	169, 1358, 1867
FspBI	CTAG	6 cut(s)	413, 515, 612, 729, 1583, 1879
GlaI	GCGC	5 cut(s)	59, 178, 706, 1154, 1498
GluI	GCNGC	3 cut(s)	169, 1358, 1867
GsaI	CCCAGC	1 cut(s)	530
HaeII	RGCGCY	4 cut(s)	61, 708, 1156, 1500
HaeIII	GGCC	4 cut(s)	319, 546, 826, 1730
HapII	CCGG	6 cut(s)	116, 1364, 1508, 1678, 1731, 1871
HgaI	GACGC	1 cut(s)	1398
HhaI	GCGC	5 cut(s)	60, 179, 707, 1155, 1499
Hin1I	GRCGYC	1 cut(s)	1497
Hin6I	GCGC	5 cut(s)	58, 177, 705, 1153, 1497
HinP1I	GCGC	5 cut(s)	58, 177, 705, 1153, 1497
HincII	GTYRAC	3 cut(s)	84, 520, 1567
HindII	GTYRAC	3 cut(s)	84, 520, 1567
HinfI	GANTC	9 cut(s)	391, 496, 552, 782, 902, 1040, 1256, 1349, 1555
HpaI	GTTAAC	2 cut(s)	520, 1567
HpaII	CCGG	6 cut(s)	116, 1364, 1508, 1678, 1731, 1871
HphI	GGTGA	1 cut(s)	235
Hpy166II	GTNNAC	9 cut(s)	84, 520, 592, 1085, 1138, 1276, 1316, 1324, 1567
Hpy188I	TCNGA	4 cut(s)	131, 149, 284, 1225
Hpy188III	TCNNGA	4 cut(s)	756, 866, 1148, 1724
Hpy8I	GTNNAC	9 cut(s)	84, 520, 592, 1085, 1138, 1276, 1316, 1324, 1567
Hpy99I	CGWCG	1 cut(s)	326
HpyAV	CCTTC	1 cut(s)	814
HpyCH4III	ACNGT	3 cut(s)	88, 1298, 1469
HpyCH4IV	ACGT	3 cut(s)	110, 134, 1087
HpyF3I	CTNAG	3 cut(s)	249, 1149, 1457
HpySE526I	ACGT	3 cut(s)	110, 134, 1087
Hsp92I	GRCGYC	1 cut(s)	1497
HspAI	GCGC	5 cut(s)	58, 177, 705, 1153, 1497
KasI	GGCGCC	1 cut(s)	1496
KpnI	GGTACC	1 cut(s)	1678
Ksp22I	TGATCA	2 cut(s)	799, 996
KspAI	GTTAAC	2 cut(s)	520, 1567
Kzo9I	GATC	3 cut(s)	192, 799, 996
LguI	GCTCTTC	2 cut(s)	67, 359
LmnI	GCTCC	1 cut(s)	34
Lsp1109I	GCAGC	3 cut(s)	155, 1344, 1853
LweI	GCATC	3 cut(s)	1191, 1396, 1590
MabI	ACCWGGT	1 cut(s)	1102
MaeI	CTAG	6 cut(s)	413, 515, 612, 729, 1583, 1879
MaeII	ACGT	3 cut(s)	110, 134, 1087
MaeIII	GTNAC	6 cut(s)	953, 1041, 1187, 1238, 1469, 1744
MalI	GATC	3 cut(s)	194, 801, 998
MboI	GATC	3 cut(s)	192, 799, 996
MfeI	CAATTG	1 cut(s)	1094
MflI	RGATCY	1 cut(s)	192
MhlI	GDGCHC	5 cut(s)	123, 355, 842, 1723, 1818
MluCI	AATT	7 cut(s)	276, 505, 734, 869, 1094, 1213, 1443
Mly113I	GGCGCC	1 cut(s)	1497
MlyI	GAGTC	3 cut(s)	385, 896, 1049
MmeI	TCCRAC	7 cut(s)	127, 473, 625, 1203, 1409, 1411, 1613
Mph1103I	ATGCAT	1 cut(s)	1251
MroXI	GAANNNNTTC	1 cut(s)	556
MseI	TTAA	3 cut(s)	519, 1230, 1566
MslI	CAYNNNNRTG	6 cut(s)	251, 665, 992, 1196, 1331, 1595
MspA1I	CMGCKG	1 cut(s)	526
MspI	CCGG	6 cut(s)	116, 1364, 1508, 1678, 1731, 1871
MspR9I	CCNGG	6 cut(s)	450, 787, 1104, 1508, 1826, 1871
MunI	CAATTG	1 cut(s)	1094
MvaI	CCWGG	4 cut(s)	450, 787, 1104, 1826
MvnI	CGCG	2 cut(s)	177, 1395
NarI	GGCGCC	1 cut(s)	1497
NciI	CCSGG	2 cut(s)	1508, 1871
NcoI	CCATGG	1 cut(s)	1590
NdeI	CATATG	1 cut(s)	834
NdeII	GATC	3 cut(s)	192, 799, 996
NheI	GCTAGC	1 cut(s)	611
NlaIV	GGNNCC	5 cut(s)	825, 1435, 1498, 1588, 1676
NmuCI	GTSAC	2 cut(s)	1041, 1238
NsiI	ATGCAT	1 cut(s)	1251
NspI	RCATGY	4 cut(s)	1171, 1249, 1573, 1836
OliI	CACNNNNGTG	1 cut(s)	251
PaeR7I	CTCGAG	1 cut(s)	1724
PceI	AGGCCT	1 cut(s)	546
PciI	ACATGT	1 cut(s)	1167
PciSI	GCTCTTC	2 cut(s)	67, 359
PcsI	WCGNNNNNNNCGW	1 cut(s)	768
PdmI	GAANNNNTTC	1 cut(s)	556
PfeI	GAWTC	6 cut(s)	496, 552, 782, 1256, 1349, 1555
PkrI	GCNGC	3 cut(s)	170, 1359, 1868
PleI	GAGTC	3 cut(s)	385, 896, 1048
PluTI	GGCGCC	1 cut(s)	1500
PpsI	GAGTC	3 cut(s)	385, 896, 1048
Ppu21I	YACGTR	1 cut(s)	1088
PpuMI	RGGWCCY	1 cut(s)	766
PscI	ACATGT	1 cut(s)	1167
Psp124BI	GAGCTC	1 cut(s)	1818
Psp5II	RGGWCCY	1 cut(s)	766
Psp6I	CCWGG	4 cut(s)	448, 785, 1102, 1824
PspFI	CCCAGC	1 cut(s)	526
PspGI	CCWGG	4 cut(s)	448, 785, 1102, 1824
PspN4I	GGNNCC	5 cut(s)	825, 1435, 1498, 1588, 1676
PspPI	GGNCC	7 cut(s)	40, 318, 766, 824, 1390, 1433, 1873
PspPPI	RGGWCCY	1 cut(s)	766
PsuI	RGATCY	1 cut(s)	192
PvuII	CAGCTG	1 cut(s)	526
RsaI	GTAC	5 cut(s)	397, 601, 1090, 1325, 1676
RsaNI	GTAC	5 cut(s)	396, 600, 1089, 1324, 1675
RseI	CAYNNNNRTG	6 cut(s)	251, 665, 992, 1196, 1331, 1595
Rsr2I	CGGWCCG	1 cut(s)	1390
RsrII	CGGWCCG	1 cut(s)	1390
SacI	GAGCTC	1 cut(s)	1818
SapI	GCTCTTC	2 cut(s)	67, 359
SaqAI	TTAA	3 cut(s)	519, 1230, 1566
SatI	GCNGC	3 cut(s)	169, 1358, 1867
Sau3AI	GATC	3 cut(s)	192, 799, 996
Sau96I	GGNCC	7 cut(s)	40, 318, 766, 824, 1390, 1433, 1873
SchI	GAGTC	3 cut(s)	385, 896, 1049
ScrFI	CCNGG	6 cut(s)	450, 787, 1104, 1508, 1826, 1871
SduI	GDGCHC	5 cut(s)	123, 355, 842, 1723, 1818
SexAI	ACCWGGT	1 cut(s)	1102
SfaNI	GCATC	3 cut(s)	1191, 1396, 1590
SfcI	CTRYAG	2 cut(s)	700, 1158
SfoI	GGCGCC	1 cut(s)	1498
Sfr274I	CTCGAG	1 cut(s)	1724
SinI	GGWCC	5 cut(s)	40, 766, 1390, 1433, 1873
SlaI	CTCGAG	1 cut(s)	1724
SmiMI	CAYNNNNRTG	6 cut(s)	251, 665, 992, 1196, 1331, 1595
SmlI	CTYRAG	1 cut(s)	1724
SmoI	CTYRAG	1 cut(s)	1724
Sse9I	AATT	7 cut(s)	276, 505, 734, 869, 1094, 1213, 1443
SseBI	AGGCCT	1 cut(s)	546
SsiI	CCGC	2 cut(s)	1393, 1438
SspDI	GGCGCC	1 cut(s)	1496
SspI	AATATT	4 cut(s)	723, 1003, 1114, 1783
SspMI	CTAG	6 cut(s)	413, 515, 612, 729, 1583, 1879
SstI	GAGCTC	1 cut(s)	1818
StuI	AGGCCT	1 cut(s)	546
StyD4I	CCNGG	6 cut(s)	448, 785, 1102, 1506, 1824, 1869
StyI	CCWWGG	6 cut(s)	547, 595, 1055, 1373, 1489, 1590
TaaI	ACNGT	3 cut(s)	88, 1298, 1469
TaiI	ACGT	3 cut(s)	113, 137, 1090
TaqI	TCGA	4 cut(s)	499, 771, 1725, 1791
TaqII	GACCGA	1 cut(s)	1226
TasI	AATT	7 cut(s)	276, 505, 734, 869, 1094, 1213, 1443
TatI	WGTACW	1 cut(s)	1323
TfiI	GAWTC	6 cut(s)	496, 552, 782, 1256, 1349, 1555
Tru1I	TTAA	3 cut(s)	519, 1230, 1566
Tru9I	TTAA	3 cut(s)	519, 1230, 1566
TscAI	CASTG	7 cut(s)	93, 355, 969, 1312, 1326, 1465, 1618
TseFI	GTSAC	2 cut(s)	1041, 1238
TseI	GCWGC	3 cut(s)	168, 1357, 1866
Tsp45I	GTSAC	2 cut(s)	1041, 1238
TspDTI	ATGAA	7 cut(s)	145, 451, 554, 730, 962, 1266, 1750
TspGWI	ACGGA	1 cut(s)	1403
TspRI	CASTG	7 cut(s)	93, 355, 969, 1312, 1326, 1465, 1618
VpaK11BI	GGWCC	5 cut(s)	40, 766, 1390, 1433, 1873
XapI	RAATTY	4 cut(s)	276, 869, 1213, 1443
XceI	RCATGY	4 cut(s)	1171, 1249, 1573, 1836
XcmI	CCANNNNNNNNNTGG	4 cut(s)	73, 253, 309, 530
XhoI	CTCGAG	1 cut(s)	1724
XmiI	GTMKAC	3 cut(s)	591, 1137, 1315
XmnI	GAANNNNTTC	1 cut(s)	556
XspI	CTAG	6 cut(s)	413, 515, 612, 729, 1583, 1879
Zsp2I	ATGCAT	1 cut(s)	1251

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.