Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0004564

Physical Location & Seq

Genomic Coordinates Forward (+)

68311442 .. 68314837

Gene Structure 3396 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G041480.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2274 bp

ATGGCTTTTGCTTCGTCTAGAACCTTGCCGCCTTGTTCTAGTCTTCCGCCATCTATCAATGTCAGAAGTGCATCTAGAGAAGCTTCACATGCATGCTCCGACATCTGCCTCACCAAGCATTCTCACAATAGTGCTGTAAAGATGGAGCAGGTCCAGCAGGAAGATGAGCGCTCTTCCATTGAGCAAGTGGAGTTGACAGTGCCGAAAACAGATGACCCCACGTTGCCGGTGCTCACATTCCGAACGTGGGTTCTGGGTTTGGTCTCATGTGTCCTTCTCTCCTTTGTGAACCAGTTTTTCTGGTACAGGACTCAGCCGTTATCTGTGACAGGCATCAGTGCACAGATTGCTGTGGTGCCAGTCGGACATTTCATGGCGAGAGTGCTGCCCACGCGCCGTTTTTTCCAAGGTACTCGGTTTGAGTTCACCATGAATCCGGGGCCTTTTAATGTCAAGGAACATGTTTTGATCACTATATTTGCGAATTGCGGGGGTGGAACTGTTTATGCTACTCATATCTTGACTGCTGTTAAGATCTTCTACAAGAGGAAGCTCACTTTTCTTCCTGCCTTTATTGTTATGCTCACCACTCAGGTGTTGGGGTTTGGTTGGGCTGGAATTTTCAGAAAATATCTGGTTGAGCCAGAGAAGATGTGGTGGCCCGTCGTTCTGGTTCAGGTTTCATTGTTCAGTGCTCTGCATGAGAAGAGCAAACGGCCTAAAGGAAGCATGACTCGTACCCAGTTCTTCCTCCTAGTGATGATTGCTAGTTTTGCTTACTATATCTTCCCTGGCTATCTTTTCATTATGCTAACATCTGTCTCTTGGGTGTGTTGGATTCGACCCAATTCTATTCTAGTTAACCAGCTCGGTTCTGGCATGAAAGGCCTTGGAATCGGTTCTTTTGGGATTGAGTGGTCTGCTATTGCAGCATACCTTGCTACTCCTTTGGCTAGCCCGTGGTTAGCCACAGCCAACATTGCTGTTGGATTTTTCTTTGTCATGTATGTGATGACACCCATCACTTACTGGTCTAATATCTACAGCGCCAAGACATTCCCAATATTTTCTAGCAAATTGTTCATGGCTAATGGTTCAAGATACGAGGTCATCGATATCATTGATTCCAGGTTTCAACTTGATCATGGCGAATATGCAAAGAAGGGGCCTCTGCATGTGAGTACCTTTTTTGCTTTTACTTACGGTCTTGGATTTGCCACTCTTTCTGCTACAGTTATGCATGTTCTACTTTTTAATGCAAGGGATATACTGGACTCGTTTCGTGGAAATAAGAAAAAGGATATCCACGCAAGGCTTATGAATAGTTACAAATCAGTGCCAACATTGTGGTTTATCCTCATCCTTGTGATCAATATTGCTCTTATCCTGTTTGCTTGTGTGCATTACAAGGAGTCACTTCAGCTGCCTTGGTGGGGTGCATTGCTTGCTTGTTTCATGGCCGTTGCGTTCACGTACCCAATAGGTGTCATCCAAGCCACCACAAACCAGCAACCAGGTTTGAATATTATCACAGAATATGTGATTGGATACCTTTATCCTGAGCGCCCTGTAGCTAACATGTGCTTCAAAGTGTATGGTTACATAAGTATGGTGCAAGGTCTAAATTTTGTGTCGGATTTTAAGCTCGGTCACTACATGAAGATTCCACCAAGAGCAATGTTCACAGTACAGATGTGTACAGCATGGTGGCTGATGGCAGACATTCCCAACCTCTGTGATACCTCCCTGCTGCCACCGGACAGCCCTTGGACTTGTCCAACGGACCGCGTGTTCTTTGATGCGTCTGTTATCTGGGGTCTTGTTGGACCCCGCAGAATTTTTGGAAACCTCGGTGAATACAGTAACATCAACTGGTTTTTCCTTGGTGGCGCCATTGCCCCGGTGCTTGTTTGGCTTGCACACAGGATTTTTCCCAAACAAAAATGGATTCTTGCTGTTAACATGCCCGTCTTACTAGGTGCCACGGCAATGATGCCCCCTGCCACTGCTTTGAACTTTCAAAGTTGGATATTTGTGGCATTTCTTTCAGGTTTTGTTGTCTTCAGGTACCGGCAAGATTTGTGGAAGAAGTATAACTATGTCGCCTCTGGTGCTCTCGAGGCCGGAACTGCCTTTGTTACGATATTGGTGTTCATTACCTTGCAGTCCAAGAATATTGAACTCGACTGGTGGGGGAACAAAGGAGAGCTCTGCCCCCTGGCTACATGCCCTACTGCGAAAGGGGTTGTCATTGCTGGCTGCCCGGTCCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009987 GO:0015833 GO:0016020 GO:0016021 GO:0019953 GO:0022412 GO:0022414 GO:0022857 GO:0030154 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0032504 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048235 GO:0048609 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0051704 GO:0055046 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

757

Amino Acids

85.09

Weight (kDa)

9.31

Isoelectric Point (pI)

43.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	78 - 719	9e-158	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004564)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27730 AT5G53510 AT5G53520
fragaria_vesca	FvH4_7g32230
malus_domestica	MD07G1295600.v1.1
prunus_persica	Prupe.2G315100_v2.0.a1
pyrus_communis	pycom07g26830
rosa_chinensis	RchiOBHm_Chr1g0381901 RchiOBHm_Chr1g0381921
rosa_laevigata	RLG00000026200 RLG00000026201
rosa_multiflora	Rmu_co8241265.1_g000001 Rmu_co8483163.1_g000001 Rmu_sc0010238.1_g000007
rosa_roxburghii	Rroxscaffold_4G00278340 Rroxscaffold_4G00278350
rosa_rugosa	Rorug01G0432100 Rorug01G0432200
rosa_samantha	Rh1AG455200 Rh1AG455400 Rh1BG412400 Rh1BG412600 Rh1CG427100 Rh1CG427400 Rh1DG444700 Rh1DG444900
rosa_wichuraiana	Rw1G039710 Rw1G041370 Rw1G041380 Rw1G041470 Rw1G041480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	139
Acc65I	GGTACC	1 cut(s)	2067
AccB1I	GGYRCC	4 cut(s)	355, 1889, 1979, 2067
AccII	CGCG	2 cut(s)	394, 1788
AciI	CCGC	5 cut(s)	29, 47, 489, 1786, 1831
AcoI	YGGCCR	1 cut(s)	1458
AcsI	RAATTY	3 cut(s)	618, 1624, 1836
AcuI	CTGAAG	2 cut(s)	1403, 2047
AcyI	GRCGYC	1 cut(s)	1890
AfaI	GTAC	8 cut(s)	305, 412, 739, 1183, 1475, 1689, 1699, 2069
AfeI	AGCGCT	1 cut(s)	170
AfiI	CCNNNNNNNGG	2 cut(s)	247, 1433
AflIII	ACRYGT	2 cut(s)	460, 1578
AgsI	TTSAA	7 cut(s)	1098, 1136, 1522, 1588, 2014, 2021, 2180
AjnI	CCWGG	4 cut(s)	790, 1127, 1513, 2217
AjuI	GAANNNNNNNTTGG	2 cut(s)	1527, 1559
AleI	CACNNNNGTG	2 cut(s)	129, 593
AloI	GAACNNNNNNTCC	2 cut(s)	1775, 1807
AluBI	AGCT	7 cut(s)	83, 553, 868, 1423, 1574, 1645, 2209
AluI	AGCT	7 cut(s)	83, 553, 868, 1423, 1574, 1645, 2209
Alw21I	GWGCWC	5 cut(s)	234, 343, 697, 2116, 2211
Alw26I	GTCTC	2 cut(s)	268, 826
Alw44I	GTGCAC	1 cut(s)	339
Ama87I	CYCGRG	1 cut(s)	2117
Aor51HI	AGCGCT	1 cut(s)	170
AoxI	GGCC	7 cut(s)	440, 659, 716, 886, 1166, 1458, 2121
ApaLI	GTGCAC	1 cut(s)	339
ApeKI	GCWGC	5 cut(s)	385, 929, 1423, 1750, 2259
ApoI	RAATTY	3 cut(s)	618, 1624, 1836
Asp700I	GAANNNNTTC	1 cut(s)	898
Asp718I	GGTACC	1 cut(s)	2067
AspLEI	GCGC	5 cut(s)	171, 396, 1049, 1566, 1892
AspS9I	GGNCC	7 cut(s)	151, 440, 660, 1166, 1783, 1826, 2266
AsuC2I	CCSGG	3 cut(s)	438, 1901, 2264
AsuHPI	GGTGA	4 cut(s)	103, 418, 577, 1865
AsuNHI	GCTAGC	1 cut(s)	953
AvaI	CYCGRG	1 cut(s)	2117
AvaII	GGWCC	4 cut(s)	151, 1783, 1826, 2266
BaeGI	GKGCMC	1 cut(s)	343
BanI	GGYRCC	4 cut(s)	355, 1889, 1979, 2067
BanII	GRGCYC	1 cut(s)	2211
BbsI	GAAGAC	2 cut(s)	35, 2053
Bbv12I	GWGCWC	5 cut(s)	234, 343, 697, 2116, 2211
BbvI	GCAGC	5 cut(s)	372, 941, 1410, 1737, 2246
BccI	CCATC	4 cut(s)	58, 136, 1028, 1708
BceAI	ACGGC	5 cut(s)	301, 381, 731, 1445, 2001
BcgI	CGANNNNNNTGC	2 cut(s)	367, 401
BciT130I	CCWGG	4 cut(s)	792, 1129, 1515, 2219
BciVI	GTATCC	1 cut(s)	1541
BclI	TGATCA	3 cut(s)	468, 1141, 1368
BcnI	CCSGG	3 cut(s)	438, 1901, 2264
BcoDI	GTCTC	2 cut(s)	268, 826
BfmI	CTRYAG	3 cut(s)	1042, 1230, 1569
BfoI	RGCGCY	4 cut(s)	172, 1050, 1567, 1893
BfuAI	ACCTGC	1 cut(s)	139
BfuI	GTATCC	1 cut(s)	1541
BglII	AGATCT	1 cut(s)	534
BisI	GCNGC	6 cut(s)	29, 386, 930, 1424, 1751, 2260
BlsI	GCNGC	6 cut(s)	30, 387, 931, 1425, 1752, 2261
Bme1390I	CCNGG	7 cut(s)	438, 792, 1129, 1515, 1901, 2219, 2264
Bme18I	GGWCC	4 cut(s)	151, 1783, 1826, 2266
BmeT110I	CYCGRG	1 cut(s)	2117
BmgT120I	GGNCC	7 cut(s)	151, 440, 660, 1166, 1783, 1826, 2266
BmiI	GGNNCC	7 cut(s)	357, 441, 1167, 1828, 1891, 1981, 2069
BmrFI	CCNGG	7 cut(s)	438, 792, 1129, 1515, 1901, 2219, 2264
BmrI	ACTGGG	1 cut(s)	736
BmsI	GCATC	4 cut(s)	80, 342, 1789, 1983
BmtI	GCTAGC	1 cut(s)	957
BmuI	ACTGGG	1 cut(s)	736
BpiI	GAAGAC	2 cut(s)	35, 2053
Bpu10I	CCTNAGC	1 cut(s)	1560
BpuMI	CCSGG	3 cut(s)	438, 1901, 2264
Bsa29I	ATCGAT	1 cut(s)	1113
BsaAI	YACGTR	1 cut(s)	1473
BsaHI	GRCGYC	1 cut(s)	1890
BsaI	GGTCTC	1 cut(s)	268
BsaWI	WCCGGW	1 cut(s)	1756
Bsc4I	CCNNNNNNNGG	2 cut(s)	247, 1433
Bse118I	RCCGGY	2 cut(s)	226, 2070
Bse1I	ACTGG	7 cut(s)	292, 359, 742, 1034, 1275, 1877, 2192
Bse3DI	GCAATG	6 cut(s)	978, 1439, 1683, 1893, 1995, 2250
BseBI	CCWGG	4 cut(s)	792, 1129, 1515, 2219
BseCI	ATCGAT	1 cut(s)	1113
BseGI	GGATG	2 cut(s)	1359, 1488
BseLI	CCNNNNNNNGG	2 cut(s)	247, 1433
BseMI	GCAATG	6 cut(s)	978, 1439, 1683, 1893, 1995, 2250
BseMII	CTCAG	3 cut(s)	326, 605, 1551
BseNI	ACTGG	7 cut(s)	292, 359, 742, 1034, 1275, 1877, 2192
BseSI	GKGCMC	1 cut(s)	343
BseXI	GCAGC	5 cut(s)	372, 941, 1410, 1737, 2246
Bsh1236I	CGCG	2 cut(s)	394, 1788
BshFI	GGCC	7 cut(s)	442, 661, 718, 888, 1168, 1460, 2123
BshNI	GGYRCC	4 cut(s)	355, 1889, 1979, 2067
BshVI	ATCGAT	1 cut(s)	1113
BsiHKAI	GWGCWC	5 cut(s)	234, 343, 697, 2116, 2211
BsiHKCI	CYCGRG	1 cut(s)	2117
BsiSI	CCGG	7 cut(s)	227, 437, 1757, 1901, 2071, 2124, 2264
BslI	CCNNNNNNNGG	2 cut(s)	247, 1433
BsmAI	GTCTC	2 cut(s)	268, 826
BsmI	GAATGC	1 cut(s)	118
BsnI	GGCC	7 cut(s)	442, 661, 718, 888, 1168, 1460, 2123
Bso31I	GGTCTC	1 cut(s)	268
BsoBI	CYCGRG	1 cut(s)	2117
Bsp1286I	GDGCHC	5 cut(s)	234, 343, 697, 2116, 2211
Bsp1407I	TGTACA	1 cut(s)	1697
Bsp143I	GATC	4 cut(s)	468, 534, 1141, 1368
BspACI	CCGC	5 cut(s)	29, 47, 489, 1786, 1831
BspANI	GGCC	7 cut(s)	442, 661, 718, 888, 1168, 1460, 2123
BspCNI	CTCAG	3 cut(s)	325, 604, 1552
BspDI	ATCGAT	1 cut(s)	1113
BspFNI	CGCG	2 cut(s)	394, 1788
BspLI	GGNNCC	7 cut(s)	357, 441, 1167, 1828, 1891, 1981, 2069
BspMI	ACCTGC	1 cut(s)	139
BspOI	GCTAGC	1 cut(s)	957
BspQI	GCTCTTC	2 cut(s)	178, 701
BspT107I	GGYRCC	4 cut(s)	355, 1889, 1979, 2067
BspTNI	GGTCTC	1 cut(s)	268
BsrDI	GCAATG	6 cut(s)	978, 1439, 1683, 1893, 1995, 2250
BsrFI	RCCGGY	2 cut(s)	226, 2070
BsrGI	TGTACA	1 cut(s)	1697
BsrI	ACTGG	7 cut(s)	292, 359, 742, 1034, 1275, 1877, 2192
BssAI	RCCGGY	2 cut(s)	226, 2070
BssMI	GATC	4 cut(s)	468, 534, 1141, 1368
BssNI	GRCGYC	1 cut(s)	1890
BssT1I	CCWWGG	5 cut(s)	406, 889, 1427, 1766, 1882
Bst2UI	CCWGG	4 cut(s)	792, 1129, 1515, 2219
Bst4CI	ACNGT	6 cut(s)	199, 502, 1205, 1234, 1687, 1862
Bst6I	CTCTTC	2 cut(s)	178, 701
BstACI	GRCGYC	1 cut(s)	1890
BstAPI	GCANNNNNTGC	3 cut(s)	347, 938, 1445
BstAUI	TGTACA	1 cut(s)	1697
BstBAI	YACGTR	1 cut(s)	1473
BstC8I	GCNNGC	5 cut(s)	94, 955, 1446, 1917, 2257
BstDEI	CTNAG	3 cut(s)	312, 591, 1560
BstDSI	CCRYGG	2 cut(s)	959, 1983
BstF5I	GGATG	2 cut(s)	1359, 1488
BstFNI	CGCG	2 cut(s)	394, 1788
BstH2I	RGCGCY	4 cut(s)	172, 1050, 1567, 1893
BstHHI	GCGC	5 cut(s)	171, 396, 1049, 1566, 1892
BstKTI	GATC	4 cut(s)	471, 537, 1144, 1371
BstMAI	GTCTC	2 cut(s)	268, 826
BstMBI	GATC	4 cut(s)	468, 534, 1141, 1368
BstNI	CCWGG	4 cut(s)	792, 1129, 1515, 2219
BstNSI	RCATGY	8 cut(s)	92, 96, 464, 1178, 1244, 1582, 1966, 2229
BstSCI	CCNGG	7 cut(s)	436, 790, 1127, 1513, 1899, 2217, 2262
BstSFI	CTRYAG	3 cut(s)	1042, 1230, 1569
BstSLI	GKGCMC	1 cut(s)	343
BstUI	CGCG	2 cut(s)	394, 1788
BstV1I	GCAGC	5 cut(s)	372, 941, 1410, 1737, 2246
BstV2I	GAAGAC	2 cut(s)	35, 2053
BstX2I	RGATCY	1 cut(s)	534
BstXI	CCANNNNNNTGG	1 cut(s)	1347
BstYI	RGATCY	1 cut(s)	534
Bsu15I	ATCGAT	1 cut(s)	1113
BsuI	GTATCC	1 cut(s)	1541
BsuRI	GGCC	7 cut(s)	442, 661, 718, 888, 1168, 1460, 2123
BsuTUI	ATCGAT	1 cut(s)	1113
BtgI	CCRYGG	2 cut(s)	959, 1983
BtsCI	GGATG	2 cut(s)	1359, 1488
BtsI	GCAGTG	1 cut(s)	2004
BtsIMutI	CAGTG	5 cut(s)	204, 343, 697, 1341, 2004
BveI	ACCTGC	1 cut(s)	139
Cac8I	GCNNGC	5 cut(s)	94, 955, 1446, 1917, 2257
CfoI	GCGC	5 cut(s)	171, 396, 1049, 1566, 1892
Cfr10I	RCCGGY	2 cut(s)	226, 2070
Cfr13I	GGNCC	7 cut(s)	151, 440, 660, 1166, 1783, 1826, 2266
ClaI	ATCGAT	1 cut(s)	1113
CpoI	CGGWCCG	1 cut(s)	1783
CseI	GACGC	1 cut(s)	1791
CsiI	ACCWGGT	1 cut(s)	1513
Csp6I	GTAC	8 cut(s)	304, 411, 738, 1182, 1474, 1688, 1698, 2068
CspCI	CAANNNNNGTGG	2 cut(s)	2063, 2098
CspI	CGGWCCG	1 cut(s)	1783
CviQI	GTAC	8 cut(s)	304, 411, 738, 1182, 1474, 1688, 1698, 2068
DdeI	CTNAG	3 cut(s)	312, 591, 1560
DinI	GGCGCC	1 cut(s)	1891
DpnI	GATC	4 cut(s)	470, 536, 1143, 1370
DpnII	GATC	4 cut(s)	468, 534, 1141, 1368
EaeI	YGGCCR	1 cut(s)	1458
Eam1104I	CTCTTC	2 cut(s)	178, 701
EarI	CTCTTC	2 cut(s)	178, 701
EciI	GGCGGA	1 cut(s)	36
Ecl136II	GAGCTC	1 cut(s)	2209
Eco130I	CCWWGG	5 cut(s)	406, 889, 1427, 1766, 1882
Eco147I	AGGCCT	1 cut(s)	888
Eco24I	GRGCYC	1 cut(s)	2211
Eco31I	GGTCTC	1 cut(s)	268
Eco32I	GATATC	2 cut(s)	1117, 1303
Eco47I	GGWCC	4 cut(s)	151, 1783, 1826, 2266
Eco47III	AGCGCT	1 cut(s)	170
Eco53kI	GAGCTC	1 cut(s)	2209
Eco57I	CTGAAG	2 cut(s)	1403, 2047
Eco88I	CYCGRG	1 cut(s)	2117
EcoICRI	GAGCTC	1 cut(s)	2209
EcoO109I	RGGNCCY	2 cut(s)	440, 1166
EcoRII	CCWGG	4 cut(s)	790, 1127, 1513, 2217
EcoRV	GATATC	2 cut(s)	1117, 1303
EcoT14I	CCWWGG	5 cut(s)	406, 889, 1427, 1766, 1882
EcoT22I	ATGCAT	2 cut(s)	94, 1242
EcoT38I	GRGCYC	1 cut(s)	2211
EgeI	GGCGCC	1 cut(s)	1891
EheI	GGCGCC	1 cut(s)	1891
ErhI	CCWWGG	5 cut(s)	406, 889, 1427, 1766, 1882
FauI	CCCGC	2 cut(s)	482, 1838
FbaI	TGATCA	3 cut(s)	468, 1141, 1368
Fnu4HI	GCNGC	6 cut(s)	29, 386, 930, 1424, 1751, 2260
FokI	GGATG	2 cut(s)	1346, 1475
FriOI	GRGCYC	1 cut(s)	2211
Fsp4HI	GCNGC	6 cut(s)	29, 386, 930, 1424, 1751, 2260
GlaI	GCGC	5 cut(s)	170, 395, 1048, 1565, 1891
GluI	GCNGC	6 cut(s)	29, 386, 930, 1424, 1751, 2260
HaeII	RGCGCY	4 cut(s)	172, 1050, 1567, 1893
HaeIII	GGCC	7 cut(s)	442, 661, 718, 888, 1168, 1460, 2123
HapII	CCGG	7 cut(s)	227, 437, 1757, 1901, 2071, 2124, 2264
HgaI	GACGC	1 cut(s)	1791
HhaI	GCGC	5 cut(s)	171, 396, 1049, 1566, 1892
Hin1I	GRCGYC	1 cut(s)	1890
Hin6I	GCGC	5 cut(s)	169, 394, 1047, 1564, 1890
HinP1I	GCGC	5 cut(s)	169, 394, 1047, 1564, 1890
HincII	GTYRAC	3 cut(s)	195, 862, 1960
HindII	GTYRAC	3 cut(s)	195, 862, 1960
HindIII	AAGCTT	1 cut(s)	81
HpaI	GTTAAC	2 cut(s)	862, 1960
HpaII	CCGG	7 cut(s)	227, 437, 1757, 1901, 2071, 2124, 2264
HphI	GGTGA	4 cut(s)	103, 418, 577, 1865
Hpy166II	GTNNAC	9 cut(s)	195, 289, 341, 426, 862, 1470, 1683, 1698, 1960
Hpy188I	TCNGA	6 cut(s)	65, 100, 242, 365, 626, 1636
Hpy188III	TCNNGA	6 cut(s)	18, 75, 520, 1098, 1559, 2117
Hpy8I	GTNNAC	9 cut(s)	195, 289, 341, 426, 862, 1470, 1683, 1698, 1960
Hpy99I	CGWCG	1 cut(s)	668
HpyAV	CCTTC	2 cut(s)	284, 1156
HpyCH4III	ACNGT	6 cut(s)	199, 502, 1205, 1234, 1687, 1862
HpyCH4IV	ACGT	3 cut(s)	221, 245, 1472
HpyF3I	CTNAG	3 cut(s)	312, 591, 1560
HpySE526I	ACGT	3 cut(s)	221, 245, 1472
Hsp92I	GRCGYC	1 cut(s)	1890
HspAI	GCGC	5 cut(s)	169, 394, 1047, 1564, 1890
KasI	GGCGCC	1 cut(s)	1889
KpnI	GGTACC	1 cut(s)	2071
Ksp22I	TGATCA	3 cut(s)	468, 1141, 1368
KspAI	GTTAAC	2 cut(s)	862, 1960
Kzo9I	GATC	4 cut(s)	468, 534, 1141, 1368
LguI	GCTCTTC	2 cut(s)	178, 701
LmnI	GCTCC	2 cut(s)	101, 145
Lsp1109I	GCAGC	5 cut(s)	372, 941, 1410, 1737, 2246
LweI	GCATC	4 cut(s)	80, 342, 1789, 1983
MabI	ACCWGGT	1 cut(s)	1513
MaeII	ACGT	3 cut(s)	221, 245, 1472
MaeIII	GTNAC	7 cut(s)	325, 1325, 1413, 1598, 1649, 1862, 2137
MalI	GATC	4 cut(s)	470, 536, 1143, 1370
MboI	GATC	4 cut(s)	468, 534, 1141, 1368
MflI	RGATCY	1 cut(s)	534
MhlI	GDGCHC	5 cut(s)	234, 343, 697, 2116, 2211
MluCI	AATT	6 cut(s)	484, 618, 847, 1076, 1624, 1836
Mly113I	GGCGCC	1 cut(s)	1890
MlyI	GAGTC	4 cut(s)	304, 727, 1268, 1421
MmeI	TCCRAC	8 cut(s)	123, 343, 815, 967, 1614, 1802, 1804, 2006
Mph1103I	ATGCAT	2 cut(s)	94, 1242
MroXI	GAANNNNTTC	1 cut(s)	898
MseI	TTAA	6 cut(s)	447, 531, 861, 1254, 1641, 1959
MslI	CAYNNNNRTG	7 cut(s)	91, 129, 593, 1007, 1364, 1607, 1988
MspA1I	CMGCKG	1 cut(s)	1423
MspI	CCGG	7 cut(s)	227, 437, 1757, 1901, 2071, 2124, 2264
MspR9I	CCNGG	7 cut(s)	438, 792, 1129, 1515, 1901, 2219, 2264
Mva1269I	GAATGC	1 cut(s)	118
MvaI	CCWGG	4 cut(s)	792, 1129, 1515, 2219
MvnI	CGCG	2 cut(s)	394, 1788
NarI	GGCGCC	1 cut(s)	1890
NciI	CCSGG	3 cut(s)	438, 1901, 2264
NdeII	GATC	4 cut(s)	468, 534, 1141, 1368
NheI	GCTAGC	1 cut(s)	953
NlaIV	GGNNCC	7 cut(s)	357, 441, 1167, 1828, 1891, 1981, 2069
NmuCI	GTSAC	3 cut(s)	325, 1413, 1649
NsiI	ATGCAT	2 cut(s)	94, 1242
NspI	RCATGY	8 cut(s)	92, 96, 464, 1178, 1244, 1582, 1966, 2229
OliI	CACNNNNGTG	2 cut(s)	129, 593
PaeI	GCATGC	1 cut(s)	96
PaeR7I	CTCGAG	1 cut(s)	2117
PceI	AGGCCT	1 cut(s)	888
PciI	ACATGT	2 cut(s)	460, 1578
PciSI	GCTCTTC	2 cut(s)	178, 701
PcsI	WCGNNNNNNNCGW	1 cut(s)	1110
PctI	GAATGC	1 cut(s)	118
PdmI	GAANNNNTTC	1 cut(s)	898
PfeI	GAWTC	6 cut(s)	433, 838, 894, 1124, 1663, 1948
PkrI	GCNGC	6 cut(s)	30, 387, 931, 1425, 1752, 2261
PleI	GAGTC	4 cut(s)	304, 727, 1268, 1420
PluTI	GGCGCC	1 cut(s)	1893
PpsI	GAGTC	4 cut(s)	304, 727, 1268, 1420
Ppu21I	YACGTR	1 cut(s)	1473
PscI	ACATGT	2 cut(s)	460, 1578
Psp124BI	GAGCTC	1 cut(s)	2211
Psp6I	CCWGG	4 cut(s)	790, 1127, 1513, 2217
PspGI	CCWGG	4 cut(s)	790, 1127, 1513, 2217
PspN4I	GGNNCC	7 cut(s)	357, 441, 1167, 1828, 1891, 1981, 2069
PspPI	GGNCC	7 cut(s)	151, 440, 660, 1166, 1783, 1826, 2266
PsuI	RGATCY	1 cut(s)	534
PvuII	CAGCTG	1 cut(s)	1423
RsaI	GTAC	8 cut(s)	305, 412, 739, 1183, 1475, 1689, 1699, 2069
RsaNI	GTAC	8 cut(s)	304, 411, 738, 1182, 1474, 1688, 1698, 2068
RseI	CAYNNNNRTG	7 cut(s)	91, 129, 593, 1007, 1364, 1607, 1988
Rsr2I	CGGWCCG	1 cut(s)	1783
RsrII	CGGWCCG	1 cut(s)	1783
SacI	GAGCTC	1 cut(s)	2211
SapI	GCTCTTC	2 cut(s)	178, 701
SaqAI	TTAA	6 cut(s)	447, 531, 861, 1254, 1641, 1959
SatI	GCNGC	6 cut(s)	29, 386, 930, 1424, 1751, 2260
Sau3AI	GATC	4 cut(s)	468, 534, 1141, 1368
Sau96I	GGNCC	7 cut(s)	151, 440, 660, 1166, 1783, 1826, 2266
SchI	GAGTC	4 cut(s)	304, 727, 1268, 1421
ScrFI	CCNGG	7 cut(s)	438, 792, 1129, 1515, 1901, 2219, 2264
SduI	GDGCHC	5 cut(s)	234, 343, 697, 2116, 2211
SexAI	ACCWGGT	1 cut(s)	1513
SfaNI	GCATC	4 cut(s)	80, 342, 1789, 1983
SfcI	CTRYAG	3 cut(s)	1042, 1230, 1569
SfoI	GGCGCC	1 cut(s)	1891
Sfr274I	CTCGAG	1 cut(s)	2117
SinI	GGWCC	4 cut(s)	151, 1783, 1826, 2266
SlaI	CTCGAG	1 cut(s)	2117
SmiMI	CAYNNNNRTG	7 cut(s)	91, 129, 593, 1007, 1364, 1607, 1988
SmlI	CTYRAG	1 cut(s)	2117
SmoI	CTYRAG	1 cut(s)	2117
SphI	GCATGC	1 cut(s)	96
Sse9I	AATT	6 cut(s)	484, 618, 847, 1076, 1624, 1836
SseBI	AGGCCT	1 cut(s)	888
SsiI	CCGC	5 cut(s)	29, 47, 489, 1786, 1831
SspDI	GGCGCC	1 cut(s)	1889
SspI	AATATT	4 cut(s)	1065, 1375, 1525, 2176
SstI	GAGCTC	1 cut(s)	2211
StuI	AGGCCT	1 cut(s)	888
StyD4I	CCNGG	7 cut(s)	436, 790, 1127, 1513, 1899, 2217, 2262
StyI	CCWWGG	5 cut(s)	406, 889, 1427, 1766, 1882
TaaI	ACNGT	6 cut(s)	199, 502, 1205, 1234, 1687, 1862
TaiI	ACGT	3 cut(s)	224, 248, 1475
TaqI	TCGA	4 cut(s)	841, 1113, 2118, 2184
TaqII	GACCGA	1 cut(s)	1637
TasI	AATT	6 cut(s)	484, 618, 847, 1076, 1624, 1836
TatI	WGTACW	2 cut(s)	1687, 1697
TauI	GCSGC	1 cut(s)	31
TfiI	GAWTC	6 cut(s)	433, 838, 894, 1124, 1663, 1948
Tru1I	TTAA	6 cut(s)	447, 531, 861, 1254, 1641, 1959
Tru9I	TTAA	6 cut(s)	447, 531, 861, 1254, 1641, 1959
TscAI	CASTG	5 cut(s)	204, 343, 697, 1341, 2011
TseFI	GTSAC	3 cut(s)	325, 1413, 1649
TseI	GCWGC	5 cut(s)	385, 929, 1423, 1750, 2259
Tsp45I	GTSAC	3 cut(s)	325, 1413, 1649
TspGWI	ACGGA	1 cut(s)	1796
TspRI	CASTG	5 cut(s)	204, 343, 697, 1341, 2011
VneI	GTGCAC	1 cut(s)	339
VpaK11BI	GGWCC	4 cut(s)	151, 1783, 1826, 2266
XapI	RAATTY	3 cut(s)	618, 1624, 1836
XbaI	TCTAGA	2 cut(s)	17, 74
XceI	RCATGY	8 cut(s)	92, 96, 464, 1178, 1244, 1582, 1966, 2229
XcmI	CCANNNNNNNNNTGG	4 cut(s)	184, 595, 651, 872
XhoI	CTCGAG	1 cut(s)	2117
XmnI	GAANNNNTTC	1 cut(s)	898
Zsp2I	ATGCAT	2 cut(s)	94, 1242

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.