Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0004564

Physical Location & Seq

Genomic Coordinates Forward (+)

35622346 .. 35625577

Gene Structure 3232 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1295600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2199 bp

ATGGCTGAGATAGACGCTGCAAAAGTTGATGCCTCTGCGGCGGAGGAGGAGGAAGTTAACGACTGCTCCATCAAGCAGGTTGACTTGACGGTGCCGAAAACCGACGACCCCACCATTCCCGTGCTCACATTCAGAATGTGGGTTCTTGGTTTGTCTTCATGCATCTTGCTCTCCTTTGTCAACCAGTTCTTCTGGTACAGGAAAAACCCTTTGTCCATCAGTTCGATTTGTGCCCAGATTGCTGTCGTGCCCATTGGGCATCTCATGGCAAGGACGCTGCCTACGTCCCCTTTTTTCAAGGGGACGTGGTTCGAGTTCACCATGAATCCGGGGCCTTTTAATATCAAGGAACATGTTTTGATCACCATATTTGCAAACTCGGGCGCTGGAAGCGTTTACGCTACTCATATCTTGTCTGCTGTGAAGCTCTTGTATAAGAGGAAGCTCACTTTTATTCCTGCCCTGCTTGTTATGTTCACCACTCAGGTGTTAGGGTTTGGCTGGGCTGGAATTTTCCGAAGAATTCTGGTTGATCCGGAGCAAATGTGGTGGCCTTCTAATCTGGTTCAGGTTTCACTCTTCAGAGCTCTGCATGAGAAGGACAAAAGGGCGAAAGGTGGAATGACTCGTTCCCAATTCTTCCTCATAGTGATGATCTGCAGTTTCTGTTACTATGTCTTTCCTGGCTATCTGATTTACATCATAACATCTTTCTCTTGGGTATGTTGGCTTGCTCCTAAGTCTATTCTTGTCCAACAACTGGGTTCTGGCTTGTCTGGCCTCGGTATTGGTTCTTTTGCGATTGACTGGGCGGCTATTTCATCATATCTTGGTACTCCGCTAGCTAGCCCATGGTTTGCCACTGCCAATATTGCCATTGGGTTTTTTCTTGTCATGTATGTGATGACACCCATCACGTACTTTTTTGATGTCTACAATGCCAAGAAGTTCCCAATATATTCTAGTGACCTTTTCACGTCTAATGGTACCACGTATGATGTTCTGAGCATCATTGATTCCAAGTTTGAACTTGACCGTCCTACGTATGCAAAGTCCGGACCTGTAAATTTGAGCACCTTCTTCGCTATGACTTATGGTCTCGGGTTTGCCACGCTTCCTGCTACGCTTGTGCATGTTCTGCTCTTTAATGCAAGGGACATTGGAAATGCATTTCGACGACAAAAGAAGTTGGATATCCATGCAAGGCTTATGAAAAAGTACAAATCAGTGCCAACATGGTGGTTTCTCGGCATCCTTGTGGTAAACATTGCTCTTATCCTCTTTGCTTGCCAGTATTACAACGAGTCTCTTCAACTGCCTTGGTGGGGTGTTCTGCTTGCTTGTGCCATTGCCATCTTGTACACAGTTCCAATTGGTATCATCACAGCCACAACAAACCAGCAACCGGGTTTGAATATTATCACGGAATATGTGATCGGGTACTTGTACCCGGAGCACCCTGTAGCGAATATGTGCTTCAAAGTGTATGGCTACATCAGTATGGCTCAAGCTTTAACTTTCCTGGCTGATTTTAAGCTTGGTCACTACATGAAGATTCCACCAAGATCAATGTTCATAGCACAGGTGGTAGGAACGATTGTAGCAGTGATTGTATACCTGGTAACAGCATGGTGGCTGATGGGTGACATTCCAAACCTTTGTGATACCTCCAAGCTGCCAAAGGATAGTCAGTGGACTTGTCCAATGGACCGCGTGTTCTTTGATGCATCAGTTATCTGGGGGCTTGTTGGCCCTCGAAGAATCTTTGGAAACCTCGGTGCATACATGAACGTCAATTGGTTCTTCTTTGGTGGGGCCATTGCCCCTGTGCTTGTCAAGCTTGCACACATGGCTTTCCCCCAACATAATTGGATTCGTCTCATCAACATGCCGGTCTTGCTGGGTGCCACATCCATGATGCCCCCGGCTAGTGCTGTAAACTTTACAAGTTGGATCATTGTTGCATTTCTTTTCGGGTATGTTGTCTACAGGTACAGGCCAGACGTGTGGTCGCGCTATAACTACGTCCTTTCTGGTGGTCTTGATGCCGGAACTGCCTTTGTTACCATATTGATGTTCATTACGCTGCAGAACCGGGGCATTGAACTTAAATGGTGGGGGAACAACGGCGAGGGCTGCCCGTTGGCTACTTGCCCTACTGCTAAAGGGATTGTAGTTGATGGCTGCCCAGTTCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009987 GO:0015833 GO:0016020 GO:0016021 GO:0019953 GO:0022412 GO:0022414 GO:0022857 GO:0030154 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0032504 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048235 GO:0048609 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0051704 GO:0055046 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

733

Amino Acids

82.05

Weight (kDa)

8.97

Isoelectric Point (pI)

33.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	42 - 694	4.7e-170	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004564)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27730 AT5G53510 AT5G53520
fragaria_vesca	FvH4_7g32230
malus_domestica	MD07G1295600.v1.1
prunus_persica	Prupe.2G315100_v2.0.a1
pyrus_communis	pycom07g26830
rosa_chinensis	RchiOBHm_Chr1g0381901 RchiOBHm_Chr1g0381921
rosa_laevigata	RLG00000026200 RLG00000026201
rosa_multiflora	Rmu_co8241265.1_g000001 Rmu_co8483163.1_g000001 Rmu_sc0010238.1_g000007
rosa_roxburghii	Rroxscaffold_4G00278340 Rroxscaffold_4G00278350
rosa_rugosa	Rorug01G0432100 Rorug01G0432200
rosa_samantha	Rh1AG455200 Rh1AG455400 Rh1BG412400 Rh1BG412600 Rh1CG427100 Rh1CG427400 Rh1DG444700 Rh1DG444900
rosa_wichuraiana	Rw1G039710 Rw1G041370 Rw1G041380 Rw1G041470 Rw1G041480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	67
Acc65I	GGTACC	1 cut(s)	986
AccB1I	GGYRCC	3 cut(s)	91, 986, 1904
AccB7I	CCANNNNNTGG	1 cut(s)	760
AccI	GTMKAC	3 cut(s)	933, 1614, 1986
AccII	CGCG	2 cut(s)	1713, 2014
AccIII	TCCGGA	2 cut(s)	535, 1055
AciI	CCGC	5 cut(s)	38, 41, 812, 839, 1711
AclWI	GGATC	2 cut(s)	527, 1961
AcsI	RAATTY	3 cut(s)	510, 522, 1066
AcuI	CTGAAG	1 cut(s)	565
AfaI	GTAC	9 cut(s)	197, 835, 920, 988, 1220, 1361, 1442, 1448, 1994
AfiI	CCNNNNNNNGG	3 cut(s)	760, 1325, 1405
AflIII	ACRYGT	2 cut(s)	352, 2004
AgsI	TTSAA	6 cut(s)	298, 1028, 1313, 1414, 1480, 2105
AhdI	GACNNNNNGTC	2 cut(s)	1095, 2008
AjiI	CACGTC	3 cut(s)	306, 978, 2005
AjnI	CCWGG	3 cut(s)	682, 1521, 1617
AleI	CACNNNNGTG	1 cut(s)	485
AloI	GAACNNNNNNTCC	2 cut(s)	1700, 1732
AluBI	AGCT	8 cut(s)	427, 445, 587, 845, 1511, 1537, 1675, 1840
AluI	AGCT	8 cut(s)	427, 445, 587, 845, 1511, 1537, 1675, 1840
Alw21I	GWGCWC	4 cut(s)	126, 589, 1076, 1458
Alw26I	GTCTC	3 cut(s)	1103, 1311, 1883
AlwI	GGATC	2 cut(s)	527, 1961
AlwNI	CAGNNNCTG	1 cut(s)	666
Ama87I	CYCGRG	2 cut(s)	379, 1100
Aor13HI	TCCGGA	2 cut(s)	535, 1055
AoxI	GGCC	6 cut(s)	332, 551, 778, 1750, 1815, 1997
ApeKI	GCWGC	6 cut(s)	17, 277, 1675, 2086, 2136, 2184
ApoI	RAATTY	3 cut(s)	510, 522, 1066
Asp718I	GGTACC	1 cut(s)	986
AspLEI	GCGC	2 cut(s)	386, 2016
AspS9I	GGNCC	5 cut(s)	332, 1058, 1708, 1751, 1815
AsuC2I	CCSGG	5 cut(s)	330, 1407, 1451, 1925, 2096
AsuHPI	GGTGA	4 cut(s)	310, 355, 469, 1655
AsuNHI	GCTAGC	2 cut(s)	841, 845
AvaI	CYCGRG	2 cut(s)	379, 1100
AvaII	GGWCC	2 cut(s)	1058, 1708
BaeGI	GKGCMC	2 cut(s)	235, 252
BanI	GGYRCC	3 cut(s)	91, 986, 1904
BanII	GRGCYC	1 cut(s)	589
BbsI	GAAGAC	1 cut(s)	147
Bbv12I	GWGCWC	4 cut(s)	126, 589, 1076, 1458
BbvI	GCAGC	6 cut(s)	4, 264, 1662, 2073, 2123, 2171
BccI	CCATC	6 cut(s)	77, 224, 920, 1361, 1633, 2174
BceAI	ACGGC	1 cut(s)	2143
BcgI	CGANNNNNNTGC	2 cut(s)	1063, 1097
BciT130I	CCWGG	3 cut(s)	684, 1523, 1619
BclI	TGATCA	1 cut(s)	360
BcnI	CCSGG	5 cut(s)	330, 1407, 1451, 1925, 2096
BcoDI	GTCTC	3 cut(s)	1103, 1311, 1883
BfaI	CTAG	4 cut(s)	842, 846, 963, 1929
BfmI	CTRYAG	4 cut(s)	658, 1461, 1987, 2087
BfoI	RGCGCY	1 cut(s)	387
BfuAI	ACCTGC	1 cut(s)	67
BglI	GCCNNNNNGGC	2 cut(s)	38, 256
BisI	GCNGC	8 cut(s)	18, 39, 278, 813, 1676, 2087, 2137, 2185
BlsI	GCNGC	8 cut(s)	19, 40, 279, 814, 1677, 2088, 2138, 2186
Bme1390I	CCNGG	8 cut(s)	330, 684, 1407, 1451, 1523, 1619, 1925, 2096
Bme18I	GGWCC	2 cut(s)	1058, 1708
BmeRI	GACNNNNNGTC	2 cut(s)	1095, 2008
BmeT110I	CYCGRG	2 cut(s)	379, 1100
BmgBI	CACGTC	3 cut(s)	306, 978, 2005
BmgT120I	GGNCC	5 cut(s)	332, 1058, 1708, 1751, 1815
BmiI	GGNNCC	5 cut(s)	93, 333, 988, 1816, 1906
BmrFI	CCNGG	8 cut(s)	330, 684, 1407, 1451, 1523, 1619, 1925, 2096
BmrI	ACTGGG	3 cut(s)	770, 817, 2183
BmsI	GCATC	9 cut(s)	19, 171, 268, 1017, 1260, 1714, 1736, 1908, 2035
BmtI	GCTAGC	2 cut(s)	845, 849
BmuI	ACTGGG	3 cut(s)	770, 817, 2183
BpiI	GAAGAC	1 cut(s)	147
BpuEI	CTTGAG	1 cut(s)	1491
BpuMI	CCSGG	5 cut(s)	330, 1407, 1451, 1925, 2096
BsaAI	YACGTR	3 cut(s)	918, 993, 1044
BsaBI	GATNNNNATC	1 cut(s)	698
BsaI	GGTCTC	1 cut(s)	1103
BsaJI	CCNNGG	7 cut(s)	329, 781, 851, 1319, 1774, 1923, 2095
BsaWI	WCCGGW	2 cut(s)	535, 1055
BsaXI	ACNNNNNCTCC	4 cut(s)	50, 80, 530, 560
Bsc4I	CCNNNNNNNGG	3 cut(s)	760, 1325, 1405
Bse118I	RCCGGY	1 cut(s)	1891
Bse1I	ACTGG	5 cut(s)	184, 765, 812, 1291, 2189
Bse3DI	GCAATG	3 cut(s)	1266, 1347, 1818
Bse8I	GATNNNNATC	1 cut(s)	698
BseAI	TCCGGA	2 cut(s)	535, 1055
BseBI	CCWGG	3 cut(s)	684, 1523, 1619
BseDI	CCNNGG	7 cut(s)	329, 781, 851, 1319, 1774, 1923, 2095
BseGI	GGATG	2 cut(s)	1251, 1910
BseJI	GATNNNNATC	1 cut(s)	698
BseLI	CCNNNNNNNGG	3 cut(s)	760, 1325, 1405
BseMI	GCAATG	3 cut(s)	1266, 1347, 1818
BseMII	CTCAG	2 cut(s)	497, 995
BseNI	ACTGG	5 cut(s)	184, 765, 812, 1291, 2189
BseRI	GAGGAG	2 cut(s)	59, 62
BseSI	GKGCMC	2 cut(s)	235, 252
BseXI	GCAGC	6 cut(s)	4, 264, 1662, 2073, 2123, 2171
BseYI	CCCAGC	2 cut(s)	501, 1900
Bsh1236I	CGCG	2 cut(s)	1713, 2014
BshFI	GGCC	6 cut(s)	334, 553, 780, 1752, 1817, 1999
BshNI	GGYRCC	3 cut(s)	91, 986, 1904
BsiHKAI	GWGCWC	4 cut(s)	126, 589, 1076, 1458
BsiHKCI	CYCGRG	2 cut(s)	379, 1100
BsiSI	CCGG	9 cut(s)	329, 536, 1056, 1406, 1451, 1892, 1925, 2049, 2095
BslFI	GGGAC	3 cut(s)	271, 316, 1169
BslI	CCNNNNNNNGG	3 cut(s)	760, 1325, 1405
BsmAI	GTCTC	3 cut(s)	1103, 1311, 1883
BsmBI	CGTCTC	1 cut(s)	1883
BsmFI	GGGAC	3 cut(s)	271, 316, 1169
BsnI	GGCC	6 cut(s)	334, 553, 780, 1752, 1817, 1999
Bso31I	GGTCTC	1 cut(s)	1103
BsoBI	CYCGRG	2 cut(s)	379, 1100
Bsp1286I	GDGCHC	6 cut(s)	126, 235, 252, 589, 1076, 1458
Bsp13I	TCCGGA	2 cut(s)	535, 1055
Bsp1407I	TGTACA	1 cut(s)	1359
Bsp143I	GATC	6 cut(s)	360, 532, 654, 1434, 1565, 1953
Bsp19I	CCATGG	1 cut(s)	851
BspACI	CCGC	5 cut(s)	38, 41, 812, 839, 1711
BspANI	GGCC	6 cut(s)	334, 553, 780, 1752, 1817, 1999
BspCNI	CTCAG	2 cut(s)	496, 996
BspEI	TCCGGA	2 cut(s)	535, 1055
BspFNI	CGCG	2 cut(s)	1713, 2014
BspLI	GGNNCC	5 cut(s)	93, 333, 988, 1816, 1906
BspMAI	CTGCAG	2 cut(s)	662, 2091
BspMI	ACCTGC	1 cut(s)	67
BspOI	GCTAGC	2 cut(s)	845, 849
BspPI	GGATC	2 cut(s)	527, 1961
BspT107I	GGYRCC	3 cut(s)	91, 986, 1904
BspTNI	GGTCTC	1 cut(s)	1103
BsrDI	GCAATG	3 cut(s)	1266, 1347, 1818
BsrFI	RCCGGY	1 cut(s)	1891
BsrGI	TGTACA	1 cut(s)	1359
BsrI	ACTGG	5 cut(s)	184, 765, 812, 1291, 2189
BssAI	RCCGGY	1 cut(s)	1891
BssECI	CCNNGG	7 cut(s)	329, 781, 851, 1319, 1774, 1923, 2095
BssMI	GATC	6 cut(s)	360, 532, 654, 1434, 1565, 1953
BssNAI	GTATAC	1 cut(s)	1615
BssT1I	CCWWGG	2 cut(s)	851, 1319
Bst1107I	GTATAC	1 cut(s)	1615
Bst2UI	CCWGG	3 cut(s)	684, 1523, 1619
Bst4CI	ACNGT	3 cut(s)	91, 1037, 1366
Bst6I	CTCTTC	2 cut(s)	584, 1314
BstAPI	GCANNNNNTGC	1 cut(s)	1138
BstAUI	TGTACA	1 cut(s)	1359
BstBAI	YACGTR	3 cut(s)	918, 993, 1044
BstC8I	GCNNGC	6 cut(s)	732, 843, 847, 1288, 1338, 1842
BstDEI	CTNAG	4 cut(s)	6, 483, 738, 1004
BstDSI	CCRYGG	1 cut(s)	851
BstF5I	GGATG	2 cut(s)	1251, 1910
BstFNI	CGCG	2 cut(s)	1713, 2014
BstH2I	RGCGCY	1 cut(s)	387
BstHHI	GCGC	2 cut(s)	386, 2016
BstKTI	GATC	6 cut(s)	363, 535, 657, 1437, 1568, 1956
BstMAI	GTCTC	3 cut(s)	1103, 1311, 1883
BstMBI	GATC	6 cut(s)	360, 532, 654, 1434, 1565, 1953
BstNI	CCWGG	3 cut(s)	684, 1523, 1619
BstNSI	RCATGY	3 cut(s)	356, 1136, 1891
BstSCI	CCNGG	8 cut(s)	328, 682, 1405, 1449, 1521, 1617, 1923, 2094
BstSFI	CTRYAG	4 cut(s)	658, 1461, 1987, 2087
BstSLI	GKGCMC	2 cut(s)	235, 252
BstSNI	TACGTA	1 cut(s)	1044
BstUI	CGCG	2 cut(s)	1713, 2014
BstV1I	GCAGC	6 cut(s)	4, 264, 1662, 2073, 2123, 2171
BstV2I	GAAGAC	1 cut(s)	147
BstXI	CCANNNNNNTGG	2 cut(s)	1239, 2007
BstZ17I	GTATAC	1 cut(s)	1615
BsuRI	GGCC	6 cut(s)	334, 553, 780, 1752, 1817, 1999
BtgI	CCRYGG	1 cut(s)	851
BtrI	CACGTC	3 cut(s)	306, 978, 2005
BtsCI	GGATG	2 cut(s)	1251, 1910
BtsI	GCAGTG	2 cut(s)	861, 1611
BtsIMutI	CAGTG	5 cut(s)	861, 1233, 1611, 1697, 2194
BveI	ACCTGC	1 cut(s)	67
Cac8I	GCNNGC	6 cut(s)	732, 843, 847, 1288, 1338, 1842
CaiI	CAGNNNCTG	1 cut(s)	666
CfoI	GCGC	2 cut(s)	386, 2016
Cfr10I	RCCGGY	1 cut(s)	1891
Cfr13I	GGNCC	5 cut(s)	332, 1058, 1708, 1751, 1815
CseI	GACGC	2 cut(s)	23, 283
CsiI	ACCWGGT	1 cut(s)	1617
Csp6I	GTAC	9 cut(s)	196, 834, 919, 987, 1219, 1360, 1441, 1447, 1993
CspCI	CAANNNNNGTGG	2 cut(s)	530, 565
CviQI	GTAC	9 cut(s)	196, 834, 919, 987, 1219, 1360, 1441, 1447, 1993
DdeI	CTNAG	4 cut(s)	6, 483, 738, 1004
DpnI	GATC	6 cut(s)	362, 534, 656, 1436, 1567, 1955
DpnII	GATC	6 cut(s)	360, 532, 654, 1434, 1565, 1953
DriI	GACNNNNNGTC	2 cut(s)	1095, 2008
Eam1104I	CTCTTC	2 cut(s)	584, 1314
Eam1105I	GACNNNNNGTC	2 cut(s)	1095, 2008
EarI	CTCTTC	2 cut(s)	584, 1314
EciI	GGCGGA	1 cut(s)	56
Ecl136II	GAGCTC	1 cut(s)	587
Eco105I	TACGTA	1 cut(s)	1044
Eco130I	CCWWGG	2 cut(s)	851, 1319
Eco24I	GRGCYC	1 cut(s)	589
Eco31I	GGTCTC	1 cut(s)	1103
Eco32I	GATATC	1 cut(s)	1195
Eco47I	GGWCC	2 cut(s)	1058, 1708
Eco53kI	GAGCTC	1 cut(s)	587
Eco57I	CTGAAG	1 cut(s)	565
Eco88I	CYCGRG	2 cut(s)	379, 1100
EcoICRI	GAGCTC	1 cut(s)	587
EcoO109I	RGGNCCY	1 cut(s)	332
EcoRI	GAATTC	1 cut(s)	522
EcoRII	CCWGG	3 cut(s)	682, 1521, 1617
EcoRV	GATATC	1 cut(s)	1195
EcoT14I	CCWWGG	2 cut(s)	851, 1319
EcoT22I	ATGCAT	3 cut(s)	164, 1171, 1729
EcoT38I	GRGCYC	1 cut(s)	589
ErhI	CCWWGG	2 cut(s)	851, 1319
Esp3I	CGTCTC	1 cut(s)	1883
FaqI	GGGAC	3 cut(s)	271, 316, 1169
FbaI	TGATCA	1 cut(s)	360
FblI	GTMKAC	3 cut(s)	933, 1614, 1986
Fnu4HI	GCNGC	8 cut(s)	18, 39, 278, 813, 1676, 2087, 2137, 2185
FokI	GGATG	2 cut(s)	1238, 1897
FriOI	GRGCYC	1 cut(s)	589
Fsp4HI	GCNGC	8 cut(s)	18, 39, 278, 813, 1676, 2087, 2137, 2185
FspBI	CTAG	4 cut(s)	842, 846, 963, 1929
GlaI	GCGC	2 cut(s)	385, 2015
GluI	GCNGC	8 cut(s)	18, 39, 278, 813, 1676, 2087, 2137, 2185
GsaI	CCCAGC	2 cut(s)	505, 1904
HaeII	RGCGCY	1 cut(s)	387
HaeIII	GGCC	6 cut(s)	334, 553, 780, 1752, 1817, 1999
HapII	CCGG	9 cut(s)	329, 536, 1056, 1406, 1451, 1892, 1925, 2049, 2095
HgaI	GACGC	2 cut(s)	23, 283
HhaI	GCGC	2 cut(s)	386, 2016
Hin6I	GCGC	2 cut(s)	384, 2014
HinP1I	GCGC	2 cut(s)	384, 2014
HincII	GTYRAC	3 cut(s)	58, 82, 181
HindII	GTYRAC	3 cut(s)	58, 82, 181
HindIII	AAGCTT	3 cut(s)	1509, 1535, 1838
HinfI	GANTC	7 cut(s)	325, 625, 1016, 1304, 1555, 1761, 1873
HpaI	GTTAAC	1 cut(s)	58
HpaII	CCGG	9 cut(s)	329, 536, 1056, 1406, 1451, 1892, 1925, 2049, 2095
HphI	GGTGA	4 cut(s)	310, 355, 469, 1655
Hpy188I	TCNGA	5 cut(s)	134, 518, 584, 693, 1005
Hpy188III	TCNNGA	3 cut(s)	536, 1056, 2042
Hpy99I	CGWCG	2 cut(s)	107, 1179
HpyAV	CCTTC	3 cut(s)	564, 592, 1087
HpyCH4III	ACNGT	3 cut(s)	91, 1037, 1366
HpyCH4IV	ACGT	9 cut(s)	284, 305, 917, 977, 992, 1043, 1791, 2004, 2025
HpyF3I	CTNAG	4 cut(s)	6, 483, 738, 1004
HpySE526I	ACGT	9 cut(s)	284, 305, 917, 977, 992, 1043, 1791, 2004, 2025
HspAI	GCGC	2 cut(s)	384, 2014
Kpn2I	TCCGGA	2 cut(s)	535, 1055
KpnI	GGTACC	1 cut(s)	990
Ksp22I	TGATCA	1 cut(s)	360
KspAI	GTTAAC	1 cut(s)	58
Kzo9I	GATC	6 cut(s)	360, 532, 654, 1434, 1565, 1953
LmnI	GCTCC	4 cut(s)	71, 538, 739, 1453
Lsp1109I	GCAGC	6 cut(s)	4, 264, 1662, 2073, 2123, 2171
LweI	GCATC	9 cut(s)	19, 171, 268, 1017, 1260, 1714, 1736, 1908, 2035
MabI	ACCWGGT	1 cut(s)	1617
MaeI	CTAG	4 cut(s)	842, 846, 963, 1929
MaeII	ACGT	9 cut(s)	284, 305, 917, 977, 992, 1043, 1791, 2004, 2025
MaeIII	GTNAC	6 cut(s)	668, 965, 1541, 1621, 1643, 2062
MalI	GATC	6 cut(s)	362, 534, 656, 1436, 1567, 1955
MboI	GATC	6 cut(s)	360, 532, 654, 1434, 1565, 1953
MfeI	CAATTG	2 cut(s)	1371, 1795
MhlI	GDGCHC	6 cut(s)	126, 235, 252, 589, 1076, 1458
MluCI	AATT	7 cut(s)	510, 522, 635, 1066, 1371, 1795, 1867
MlyI	GAGTC	2 cut(s)	619, 1313
MmeI	TCCRAC	3 cut(s)	778, 1170, 1931
Mph1103I	ATGCAT	3 cut(s)	164, 1171, 1729
MroI	TCCGGA	2 cut(s)	535, 1055
MseI	TTAA	6 cut(s)	57, 339, 1146, 1514, 1533, 2109
MslI	CAYNNNNRTG	9 cut(s)	119, 485, 650, 899, 1256, 1499, 1886, 1913, 2072
MspI	CCGG	9 cut(s)	329, 536, 1056, 1406, 1451, 1892, 1925, 2049, 2095
MspR9I	CCNGG	8 cut(s)	330, 684, 1407, 1451, 1523, 1619, 1925, 2096
MunI	CAATTG	2 cut(s)	1371, 1795
MvaI	CCWGG	3 cut(s)	684, 1523, 1619
MvnI	CGCG	2 cut(s)	1713, 2014
NciI	CCSGG	5 cut(s)	330, 1407, 1451, 1925, 2096
NcoI	CCATGG	1 cut(s)	851
NdeII	GATC	6 cut(s)	360, 532, 654, 1434, 1565, 1953
NheI	GCTAGC	2 cut(s)	841, 845
NlaIV	GGNNCC	5 cut(s)	93, 333, 988, 1816, 1906
NmeAIII	GCCGAG	1 cut(s)	1227
NmuCI	GTSAC	3 cut(s)	965, 1541, 1643
NsiI	ATGCAT	3 cut(s)	164, 1171, 1729
NspI	RCATGY	3 cut(s)	356, 1136, 1891
OliI	CACNNNNGTG	1 cut(s)	485
PciI	ACATGT	1 cut(s)	352
PcsI	WCGNNNNNNNCGW	1 cut(s)	281
PfeI	GAWTC	5 cut(s)	325, 1016, 1555, 1761, 1873
PflMI	CCANNNNNTGG	1 cut(s)	760
PkrI	GCNGC	8 cut(s)	19, 40, 279, 814, 1677, 2088, 2138, 2186
PleI	GAGTC	2 cut(s)	619, 1312
PpsI	GAGTC	2 cut(s)	619, 1312
Ppu21I	YACGTR	3 cut(s)	918, 993, 1044
PscI	ACATGT	1 cut(s)	352
Psp124BI	GAGCTC	1 cut(s)	589
Psp6I	CCWGG	3 cut(s)	682, 1521, 1617
PspFI	CCCAGC	2 cut(s)	501, 1900
PspGI	CCWGG	3 cut(s)	682, 1521, 1617
PspN4I	GGNNCC	5 cut(s)	93, 333, 988, 1816, 1906
PspPI	GGNCC	5 cut(s)	332, 1058, 1708, 1751, 1815
PstI	CTGCAG	2 cut(s)	662, 2091
PstNI	CAGNNNCTG	1 cut(s)	666
RsaI	GTAC	9 cut(s)	197, 835, 920, 988, 1220, 1361, 1442, 1448, 1994
RsaNI	GTAC	9 cut(s)	196, 834, 919, 987, 1219, 1360, 1441, 1447, 1993
RseI	CAYNNNNRTG	9 cut(s)	119, 485, 650, 899, 1256, 1499, 1886, 1913, 2072
SacI	GAGCTC	1 cut(s)	589
SaqAI	TTAA	6 cut(s)	57, 339, 1146, 1514, 1533, 2109
SatI	GCNGC	8 cut(s)	18, 39, 278, 813, 1676, 2087, 2137, 2185
Sau3AI	GATC	6 cut(s)	360, 532, 654, 1434, 1565, 1953
Sau96I	GGNCC	5 cut(s)	332, 1058, 1708, 1751, 1815
SchI	GAGTC	2 cut(s)	619, 1313
ScrFI	CCNGG	8 cut(s)	330, 684, 1407, 1451, 1523, 1619, 1925, 2096
SduI	GDGCHC	6 cut(s)	126, 235, 252, 589, 1076, 1458
SexAI	ACCWGGT	1 cut(s)	1617
SfaNI	GCATC	9 cut(s)	19, 171, 268, 1017, 1260, 1714, 1736, 1908, 2035
SfcI	CTRYAG	4 cut(s)	658, 1461, 1987, 2087
SinI	GGWCC	2 cut(s)	1058, 1708
SmiMI	CAYNNNNRTG	9 cut(s)	119, 485, 650, 899, 1256, 1499, 1886, 1913, 2072
SmlI	CTYRAG	1 cut(s)	1506
SmoI	CTYRAG	1 cut(s)	1506
SnaBI	TACGTA	1 cut(s)	1044
Sse9I	AATT	7 cut(s)	510, 522, 635, 1066, 1371, 1795, 1867
SsiI	CCGC	5 cut(s)	38, 41, 812, 839, 1711
SspI	AATATT	2 cut(s)	871, 1417
SspMI	CTAG	4 cut(s)	842, 846, 963, 1929
SstI	GAGCTC	1 cut(s)	589
StyD4I	CCNGG	8 cut(s)	328, 682, 1405, 1449, 1521, 1617, 1923, 2094
StyI	CCWWGG	2 cut(s)	851, 1319
TaaI	ACNGT	3 cut(s)	91, 1037, 1366
TaiI	ACGT	9 cut(s)	287, 308, 920, 980, 995, 1046, 1794, 2007, 2028
TaqI	TCGA	4 cut(s)	224, 312, 1174, 1756
TasI	AATT	7 cut(s)	510, 522, 635, 1066, 1371, 1795, 1867
TatI	WGTACW	2 cut(s)	1218, 1359
TauI	GCSGC	2 cut(s)	41, 815
TfiI	GAWTC	5 cut(s)	325, 1016, 1555, 1761, 1873
Tru1I	TTAA	6 cut(s)	57, 339, 1146, 1514, 1533, 2109
Tru9I	TTAA	6 cut(s)	57, 339, 1146, 1514, 1533, 2109
TscAI	CASTG	4 cut(s)	868, 1233, 1611, 1697
TseFI	GTSAC	3 cut(s)	965, 1541, 1643
TseI	GCWGC	6 cut(s)	17, 277, 1675, 2086, 2136, 2184
Tsp45I	GTSAC	3 cut(s)	965, 1541, 1643
TspDTI	ATGAA	8 cut(s)	147, 338, 810, 1226, 1564, 1565, 1802, 2068
TspGWI	ACGGA	1 cut(s)	1439
TspRI	CASTG	4 cut(s)	868, 1233, 1611, 1697
Van91I	CCANNNNNTGG	1 cut(s)	760
VpaK11BI	GGWCC	2 cut(s)	1058, 1708
XapI	RAATTY	3 cut(s)	510, 522, 1066
XceI	RCATGY	3 cut(s)	356, 1136, 1891
XmiI	GTMKAC	3 cut(s)	933, 1614, 1986
XspI	CTAG	4 cut(s)	842, 846, 963, 1929
Zsp2I	ATGCAT	3 cut(s)	164, 1171, 1729

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.