Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0004564

Physical Location & Seq

Genomic Coordinates Reverse (-)

68246100 .. 68248995

Gene Structure 2896 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G041370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1719 bp

ATGGAGCAGGTCCAGCAGGAAGATGAGCGCTCTTCCATTGAGCAAGTGGAGTTGACAGTGCCGAAAACAGATGACCCCACGTTGCCGGTGCTCACATTCCGAACGTGGGTTCTGGGTTTGGTCTCATGTGTCCTTCTCTCCTTTGTGAACCAGTTTTTCTGGTACAGGACTCAGCCGTTATCTGTGACAGGCATCAGTGCACAGATTGCTGTGGTGCCAGTCGGACATTTCATGGCGAGAGTGCTGCCCACGCGCCGTTTTTTCCAAGGTACTCGGTTTGAGTTCACCATGAATCCGGGGCCTTTTAATGTCAAGGAACATGTTTTGATCACTATATTTGCGAATTGCGGGGGTGGAACTGTTTATGCTACTCATATCTTGACTGCTGTTAAGATCTTCTACAAGAGGAAGCTCACTTTTCTTCCTGCCTTTATTGTTATGCTCACCACTCAGGTGTTGGGGTTTGGTTGGGCTGGAATTTTCAGAAAATATCTGGTTGAGCCAGAGAAGATGTGGTGGCCCGTCGTTCTGGTTCAGGTTTCATTGTTCAGTGCTCTGCATGAGAAGAGCAAACGGCCTAAAGGAAGCATGACTCGTACCCAGTTCTTCCTCCTAGTGATGATTGCTAGTTTTGCTTACTATATCTTCCCTGGCTATCTTTTCATTATGCTAACATCTGTCTCTTGGGTGTGTTGGATTCGACCCAATTCTATTCTAGTTAACCAGCTGGGTTCTGGCATGAAAGGCCTTGGAATCGGTTCTTTTGGGATTGAGTGGTCTGCTATTGCAGCATACCTTGGTACTCCTTTGGCTAGCCCGTGGTTAGCCACAGCCAACATTGCTGTTGGATTTTTCTTTGTCATGTATGTGATGACACCCATCACTTACTGGTCTAATATCTACAGCGCCAAGACATTCCCAATATTTTCTAGCAAATTGTTCATGGCTAATGGTTCAAGATACGAGGTCCTCGATATCATTGATTCCAGGTTTCAACTTGATCATGGCGAATATGCAAAGAAGGGGCCTCTGCATATGAGTACCTTTTTTGCTTTTACTTACGGTCTTGGATTTGCCACTCTTTCTGCTACAGTTATGCATGTTCTACTTTTTAATGCAGGGGATATACTGGACTCGTTTTGTGGAAATAAGAAAAAGGATGTCCATGCAAGGCTTATGAAGAGTTACAAATCAGTGCCAACATTGTGGTTTATCCTCATCCTTGTGATCAATATTGCTCTTATCCTGTTTGCTTTGTGTATTACAAGGAGTCACTTCAGCTTGCTTGGTGGGGTGCATTTGCTTGCTTTGTTTCATGGCCGTTGCCAACCAGGTTTGAATATTATCACAGAATATGTGATAGGATACCTTTATCCTGAGCGCCCTGTAGCTAACATGTGCTTCAAAGTGTATGGTTACATAAGTGCCACGGCAATGATGCCCCCTGCCACTGCTTTGAACTTTCAAAGTTGGATATTTGTGGCATTTCTTTCAGGTTTTGTTGTCTTCAGGTACCGGCAAGATTTGTGGAAGAAGTATAACTATGTCGCCTCTGGTGCTCTCGAGGCCGGAACTGCCTTTGTTACGATATTGGTGTTCATTACCTTGCAGTCCAAGAATATTGAACTCGACTGGTGGGGGAACAAAGGAGAGCTCTGCCCCCTGGCTACATGCCCTACTGCGAAAGGGGTTGTCATTGCTGGCTGCCCGGTCCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009987 GO:0015833 GO:0016020 GO:0016021 GO:0019953 GO:0022412 GO:0022414 GO:0022857 GO:0030154 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0032504 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0044703 GO:0048229 GO:0048232 GO:0048235 GO:0048609 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0051704 GO:0055046 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

572

Amino Acids

64.32

Weight (kDa)

9.35

Isoelectric Point (pI)

38.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	31 - 477	8.4e-100	OPT oligopeptide transporter protein
OPT	PF03169	477 - 534	1e-05	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004564)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27730 AT5G53510 AT5G53520
fragaria_vesca	FvH4_7g32230
malus_domestica	MD07G1295600.v1.1
prunus_persica	Prupe.2G315100_v2.0.a1
pyrus_communis	pycom07g26830
rosa_chinensis	RchiOBHm_Chr1g0381901 RchiOBHm_Chr1g0381921
rosa_laevigata	RLG00000026200 RLG00000026201
rosa_multiflora	Rmu_co8241265.1_g000001 Rmu_co8483163.1_g000001 Rmu_sc0010238.1_g000007
rosa_roxburghii	Rroxscaffold_4G00278340 Rroxscaffold_4G00278350
rosa_rugosa	Rorug01G0432100 Rorug01G0432200
rosa_samantha	Rh1AG455200 Rh1AG455400 Rh1BG412400 Rh1BG412600 Rh1CG427100 Rh1CG427400 Rh1DG444700 Rh1DG444900
rosa_wichuraiana	Rw1G039710 Rw1G041370 Rw1G041380 Rw1G041470 Rw1G041480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1512
AccB1I	GGYRCC	2 cut(s)	214, 1512
AccII	CGCG	1 cut(s)	253
AciI	CCGC	1 cut(s)	348
AcoI	YGGCCR	1 cut(s)	1318
AcsI	RAATTY	1 cut(s)	477
AcuI	CTGAAG	2 cut(s)	1261, 1492
AfaI	GTAC	6 cut(s)	164, 271, 598, 802, 1042, 1514
AfeI	AGCGCT	1 cut(s)	29
AfiI	CCNNNNNNNGG	1 cut(s)	106
AflIII	ACRYGT	2 cut(s)	319, 1395
AgsI	TTSAA	7 cut(s)	957, 995, 1339, 1405, 1459, 1466, 1625
AjnI	CCWGG	4 cut(s)	649, 986, 1330, 1662
AleI	CACNNNNGTG	1 cut(s)	452
AluBI	AGCT	5 cut(s)	412, 727, 1281, 1391, 1654
AluI	AGCT	5 cut(s)	412, 727, 1281, 1391, 1654
Alw21I	GWGCWC	5 cut(s)	93, 202, 556, 1561, 1656
Alw26I	GTCTC	2 cut(s)	127, 685
Alw44I	GTGCAC	1 cut(s)	198
Ama87I	CYCGRG	1 cut(s)	1562
Aor51HI	AGCGCT	1 cut(s)	29
AoxI	GGCC	7 cut(s)	299, 518, 575, 745, 1025, 1318, 1566
ApaLI	GTGCAC	1 cut(s)	198
ApeKI	GCWGC	3 cut(s)	244, 788, 1704
ApoI	RAATTY	1 cut(s)	477
Asp700I	GAANNNNTTC	1 cut(s)	757
Asp718I	GGTACC	1 cut(s)	1512
AspLEI	GCGC	4 cut(s)	30, 255, 908, 1383
AspS9I	GGNCC	6 cut(s)	10, 299, 519, 967, 1025, 1711
AsuC2I	CCSGG	2 cut(s)	297, 1709
AsuHPI	GGTGA	2 cut(s)	277, 436
AsuNHI	GCTAGC	1 cut(s)	812
AvaI	CYCGRG	1 cut(s)	1562
AvaII	GGWCC	3 cut(s)	10, 967, 1711
BaeGI	GKGCMC	1 cut(s)	202
BanI	GGYRCC	2 cut(s)	214, 1512
BanII	GRGCYC	1 cut(s)	1656
BbsI	GAAGAC	1 cut(s)	1498
Bbv12I	GWGCWC	5 cut(s)	93, 202, 556, 1561, 1656
BbvI	GCAGC	3 cut(s)	231, 800, 1691
BccI	CCATC	1 cut(s)	887
BceAI	ACGGC	5 cut(s)	160, 240, 590, 1305, 1446
BcgI	CGANNNNNNTGC	2 cut(s)	226, 260
BciT130I	CCWGG	4 cut(s)	651, 988, 1332, 1664
BciVI	GTATCC	1 cut(s)	1358
BclI	TGATCA	3 cut(s)	327, 1000, 1227
BcnI	CCSGG	2 cut(s)	297, 1709
BcoDI	GTCTC	2 cut(s)	127, 685
BfaI	CTAG	6 cut(s)	614, 627, 716, 813, 930, 1717
BfmI	CTRYAG	3 cut(s)	901, 1089, 1386
BfoI	RGCGCY	3 cut(s)	31, 909, 1384
BfuI	GTATCC	1 cut(s)	1358
BglII	AGATCT	1 cut(s)	393
BisI	GCNGC	3 cut(s)	245, 789, 1705
BlsI	GCNGC	3 cut(s)	246, 790, 1706
Bme1390I	CCNGG	6 cut(s)	297, 651, 988, 1332, 1664, 1709
Bme18I	GGWCC	3 cut(s)	10, 967, 1711
BmeT110I	CYCGRG	1 cut(s)	1562
BmgT120I	GGNCC	6 cut(s)	10, 299, 519, 967, 1025, 1711
BmiI	GGNNCC	4 cut(s)	216, 300, 1026, 1514
BmrFI	CCNGG	6 cut(s)	297, 651, 988, 1332, 1664, 1709
BmrI	ACTGGG	1 cut(s)	595
BmsI	GCATC	2 cut(s)	201, 1428
BmtI	GCTAGC	1 cut(s)	816
BmuI	ACTGGG	1 cut(s)	595
BpiI	GAAGAC	1 cut(s)	1498
Bpu10I	CCTNAGC	1 cut(s)	1377
BpuMI	CCSGG	2 cut(s)	297, 1709
BsaI	GGTCTC	1 cut(s)	127
BsaJI	CCNNGG	8 cut(s)	265, 296, 649, 748, 796, 818, 1428, 1662
Bsc4I	CCNNNNNNNGG	1 cut(s)	106
Bse118I	RCCGGY	2 cut(s)	85, 1515
Bse1I	ACTGG	6 cut(s)	151, 218, 601, 893, 1134, 1637
Bse3DI	GCAATG	3 cut(s)	837, 1440, 1695
BseBI	CCWGG	4 cut(s)	651, 988, 1332, 1664
BseDI	CCNNGG	8 cut(s)	265, 296, 649, 748, 796, 818, 1428, 1662
BseGI	GGATG	2 cut(s)	1165, 1218
BseLI	CCNNNNNNNGG	1 cut(s)	106
BseMI	GCAATG	3 cut(s)	837, 1440, 1695
BseMII	CTCAG	3 cut(s)	185, 464, 1368
BseNI	ACTGG	6 cut(s)	151, 218, 601, 893, 1134, 1637
BseSI	GKGCMC	1 cut(s)	202
BseXI	GCAGC	3 cut(s)	231, 800, 1691
BseYI	CCCAGC	1 cut(s)	727
Bsh1236I	CGCG	1 cut(s)	253
BshFI	GGCC	7 cut(s)	301, 520, 577, 747, 1027, 1320, 1568
BshNI	GGYRCC	2 cut(s)	214, 1512
BsiHKAI	GWGCWC	5 cut(s)	93, 202, 556, 1561, 1656
BsiHKCI	CYCGRG	1 cut(s)	1562
BsiSI	CCGG	5 cut(s)	86, 296, 1516, 1569, 1709
BslI	CCNNNNNNNGG	1 cut(s)	106
BsmAI	GTCTC	2 cut(s)	127, 685
BsnI	GGCC	7 cut(s)	301, 520, 577, 747, 1027, 1320, 1568
Bso31I	GGTCTC	1 cut(s)	127
BsoBI	CYCGRG	1 cut(s)	1562
Bsp1286I	GDGCHC	5 cut(s)	93, 202, 556, 1561, 1656
Bsp143I	GATC	4 cut(s)	327, 393, 1000, 1227
BspACI	CCGC	1 cut(s)	348
BspANI	GGCC	7 cut(s)	301, 520, 577, 747, 1027, 1320, 1568
BspCNI	CTCAG	3 cut(s)	184, 463, 1369
BspFNI	CGCG	1 cut(s)	253
BspLI	GGNNCC	4 cut(s)	216, 300, 1026, 1514
BspOI	GCTAGC	1 cut(s)	816
BspQI	GCTCTTC	2 cut(s)	37, 560
BspT107I	GGYRCC	2 cut(s)	214, 1512
BspTNI	GGTCTC	1 cut(s)	127
BsrDI	GCAATG	3 cut(s)	837, 1440, 1695
BsrFI	RCCGGY	2 cut(s)	85, 1515
BsrI	ACTGG	6 cut(s)	151, 218, 601, 893, 1134, 1637
BssAI	RCCGGY	2 cut(s)	85, 1515
BssECI	CCNNGG	8 cut(s)	265, 296, 649, 748, 796, 818, 1428, 1662
BssMI	GATC	4 cut(s)	327, 393, 1000, 1227
BssT1I	CCWWGG	3 cut(s)	265, 748, 796
Bst2UI	CCWGG	4 cut(s)	651, 988, 1332, 1664
Bst4CI	ACNGT	4 cut(s)	58, 361, 1064, 1093
Bst6I	CTCTTC	3 cut(s)	37, 560, 1175
BstAPI	GCANNNNNTGC	1 cut(s)	206
BstC8I	GCNNGC	4 cut(s)	814, 1283, 1305, 1702
BstDEI	CTNAG	3 cut(s)	171, 450, 1377
BstDSI	CCRYGG	2 cut(s)	818, 1428
BstF5I	GGATG	2 cut(s)	1165, 1218
BstFNI	CGCG	1 cut(s)	253
BstH2I	RGCGCY	3 cut(s)	31, 909, 1384
BstHHI	GCGC	4 cut(s)	30, 255, 908, 1383
BstKTI	GATC	4 cut(s)	330, 396, 1003, 1230
BstMAI	GTCTC	2 cut(s)	127, 685
BstMBI	GATC	4 cut(s)	327, 393, 1000, 1227
BstNI	CCWGG	4 cut(s)	651, 988, 1332, 1664
BstNSI	RCATGY	4 cut(s)	323, 1103, 1399, 1674
BstSCI	CCNGG	6 cut(s)	295, 649, 986, 1330, 1662, 1707
BstSFI	CTRYAG	3 cut(s)	901, 1089, 1386
BstSLI	GKGCMC	1 cut(s)	202
BstUI	CGCG	1 cut(s)	253
BstV1I	GCAGC	3 cut(s)	231, 800, 1691
BstV2I	GAAGAC	1 cut(s)	1498
BstX2I	RGATCY	1 cut(s)	393
BstXI	CCANNNNNNTGG	1 cut(s)	1206
BstYI	RGATCY	1 cut(s)	393
BsuI	GTATCC	1 cut(s)	1358
BsuRI	GGCC	7 cut(s)	301, 520, 577, 747, 1027, 1320, 1568
BtgI	CCRYGG	2 cut(s)	818, 1428
BtsCI	GGATG	2 cut(s)	1165, 1218
BtsI	GCAGTG	1 cut(s)	1449
BtsIMutI	CAGTG	5 cut(s)	63, 202, 556, 1200, 1449
Cac8I	GCNNGC	4 cut(s)	814, 1283, 1305, 1702
CfoI	GCGC	4 cut(s)	30, 255, 908, 1383
Cfr10I	RCCGGY	2 cut(s)	85, 1515
Cfr13I	GGNCC	6 cut(s)	10, 299, 519, 967, 1025, 1711
CsiI	ACCWGGT	1 cut(s)	1330
Csp6I	GTAC	6 cut(s)	163, 270, 597, 801, 1041, 1513
CspCI	CAANNNNNGTGG	2 cut(s)	1508, 1543
CviQI	GTAC	6 cut(s)	163, 270, 597, 801, 1041, 1513
DdeI	CTNAG	3 cut(s)	171, 450, 1377
DpnI	GATC	4 cut(s)	329, 395, 1002, 1229
DpnII	GATC	4 cut(s)	327, 393, 1000, 1227
EaeI	YGGCCR	1 cut(s)	1318
Eam1104I	CTCTTC	3 cut(s)	37, 560, 1175
EarI	CTCTTC	3 cut(s)	37, 560, 1175
Ecl136II	GAGCTC	1 cut(s)	1654
Eco130I	CCWWGG	3 cut(s)	265, 748, 796
Eco147I	AGGCCT	1 cut(s)	747
Eco24I	GRGCYC	1 cut(s)	1656
Eco31I	GGTCTC	1 cut(s)	127
Eco32I	GATATC	1 cut(s)	976
Eco47I	GGWCC	3 cut(s)	10, 967, 1711
Eco47III	AGCGCT	1 cut(s)	29
Eco53kI	GAGCTC	1 cut(s)	1654
Eco57I	CTGAAG	2 cut(s)	1261, 1492
Eco88I	CYCGRG	1 cut(s)	1562
EcoICRI	GAGCTC	1 cut(s)	1654
EcoO109I	RGGNCCY	3 cut(s)	299, 967, 1025
EcoRII	CCWGG	4 cut(s)	649, 986, 1330, 1662
EcoRV	GATATC	1 cut(s)	976
EcoT14I	CCWWGG	3 cut(s)	265, 748, 796
EcoT22I	ATGCAT	1 cut(s)	1101
EcoT38I	GRGCYC	1 cut(s)	1656
ErhI	CCWWGG	3 cut(s)	265, 748, 796
FauI	CCCGC	1 cut(s)	341
FauNDI	CATATG	1 cut(s)	1035
FbaI	TGATCA	3 cut(s)	327, 1000, 1227
Fnu4HI	GCNGC	3 cut(s)	245, 789, 1705
FokI	GGATG	2 cut(s)	1172, 1205
FriOI	GRGCYC	1 cut(s)	1656
Fsp4HI	GCNGC	3 cut(s)	245, 789, 1705
FspBI	CTAG	6 cut(s)	614, 627, 716, 813, 930, 1717
GlaI	GCGC	4 cut(s)	29, 254, 907, 1382
GluI	GCNGC	3 cut(s)	245, 789, 1705
GsaI	CCCAGC	1 cut(s)	731
HaeII	RGCGCY	3 cut(s)	31, 909, 1384
HaeIII	GGCC	7 cut(s)	301, 520, 577, 747, 1027, 1320, 1568
HapII	CCGG	5 cut(s)	86, 296, 1516, 1569, 1709
HhaI	GCGC	4 cut(s)	30, 255, 908, 1383
Hin6I	GCGC	4 cut(s)	28, 253, 906, 1381
HinP1I	GCGC	4 cut(s)	28, 253, 906, 1381
HincII	GTYRAC	2 cut(s)	54, 721
HindII	GTYRAC	2 cut(s)	54, 721
HinfI	GANTC	8 cut(s)	169, 292, 592, 697, 753, 983, 1133, 1270
HpaI	GTTAAC	1 cut(s)	721
HpaII	CCGG	5 cut(s)	86, 296, 1516, 1569, 1709
HphI	GGTGA	2 cut(s)	277, 436
Hpy166II	GTNNAC	5 cut(s)	54, 148, 200, 285, 721
Hpy188I	TCNGA	3 cut(s)	101, 224, 485
Hpy188III	TCNNGA	4 cut(s)	379, 957, 1376, 1562
Hpy8I	GTNNAC	5 cut(s)	54, 148, 200, 285, 721
Hpy99I	CGWCG	1 cut(s)	527
HpyAV	CCTTC	2 cut(s)	143, 1015
HpyCH4III	ACNGT	4 cut(s)	58, 361, 1064, 1093
HpyCH4IV	ACGT	2 cut(s)	80, 104
HpyF3I	CTNAG	3 cut(s)	171, 450, 1377
HpySE526I	ACGT	2 cut(s)	80, 104
HspAI	GCGC	4 cut(s)	28, 253, 906, 1381
KpnI	GGTACC	1 cut(s)	1516
Ksp22I	TGATCA	3 cut(s)	327, 1000, 1227
KspAI	GTTAAC	1 cut(s)	721
Kzo9I	GATC	4 cut(s)	327, 393, 1000, 1227
LguI	GCTCTTC	2 cut(s)	37, 560
LmnI	GCTCC	1 cut(s)	4
Lsp1109I	GCAGC	3 cut(s)	231, 800, 1691
LweI	GCATC	2 cut(s)	201, 1428
MabI	ACCWGGT	1 cut(s)	1330
MaeI	CTAG	6 cut(s)	614, 627, 716, 813, 930, 1717
MaeII	ACGT	2 cut(s)	80, 104
MaeIII	GTNAC	5 cut(s)	184, 1184, 1271, 1415, 1582
MalI	GATC	4 cut(s)	329, 395, 1002, 1229
MboI	GATC	4 cut(s)	327, 393, 1000, 1227
MflI	RGATCY	1 cut(s)	393
MhlI	GDGCHC	5 cut(s)	93, 202, 556, 1561, 1656
MluCI	AATT	4 cut(s)	343, 477, 706, 935
MlyI	GAGTC	4 cut(s)	163, 586, 1127, 1279
MmeI	TCCRAC	4 cut(s)	202, 674, 826, 1451
MnlI	CCTC	8 cut(s)	399, 620, 958, 980, 1038, 1226, 1558, 1561
Mph1103I	ATGCAT	1 cut(s)	1101
MroXI	GAANNNNTTC	1 cut(s)	757
MseI	TTAA	4 cut(s)	306, 390, 720, 1113
MslI	CAYNNNNRTG	4 cut(s)	452, 866, 1223, 1433
MspA1I	CMGCKG	1 cut(s)	727
MspI	CCGG	5 cut(s)	86, 296, 1516, 1569, 1709
MspR9I	CCNGG	6 cut(s)	297, 651, 988, 1332, 1664, 1709
MvaI	CCWGG	4 cut(s)	651, 988, 1332, 1664
MvnI	CGCG	1 cut(s)	253
NciI	CCSGG	2 cut(s)	297, 1709
NdeI	CATATG	1 cut(s)	1035
NdeII	GATC	4 cut(s)	327, 393, 1000, 1227
NheI	GCTAGC	1 cut(s)	812
NlaIV	GGNNCC	4 cut(s)	216, 300, 1026, 1514
NmuCI	GTSAC	2 cut(s)	184, 1271
NsiI	ATGCAT	1 cut(s)	1101
NspI	RCATGY	4 cut(s)	323, 1103, 1399, 1674
OliI	CACNNNNGTG	1 cut(s)	452
PaeR7I	CTCGAG	1 cut(s)	1562
PceI	AGGCCT	1 cut(s)	747
PciI	ACATGT	2 cut(s)	319, 1395
PciSI	GCTCTTC	2 cut(s)	37, 560
PcsI	WCGNNNNNNNCGW	1 cut(s)	969
PdmI	GAANNNNTTC	1 cut(s)	757
PfeI	GAWTC	4 cut(s)	292, 697, 753, 983
PkrI	GCNGC	3 cut(s)	246, 790, 1706
PleI	GAGTC	4 cut(s)	163, 586, 1127, 1278
PpsI	GAGTC	4 cut(s)	163, 586, 1127, 1278
PpuMI	RGGWCCY	1 cut(s)	967
PscI	ACATGT	2 cut(s)	319, 1395
Psp124BI	GAGCTC	1 cut(s)	1656
Psp5II	RGGWCCY	1 cut(s)	967
Psp6I	CCWGG	4 cut(s)	649, 986, 1330, 1662
PspFI	CCCAGC	1 cut(s)	727
PspGI	CCWGG	4 cut(s)	649, 986, 1330, 1662
PspN4I	GGNNCC	4 cut(s)	216, 300, 1026, 1514
PspPI	GGNCC	6 cut(s)	10, 299, 519, 967, 1025, 1711
PspPPI	RGGWCCY	1 cut(s)	967
PsuI	RGATCY	1 cut(s)	393
PvuII	CAGCTG	1 cut(s)	727
RsaI	GTAC	6 cut(s)	164, 271, 598, 802, 1042, 1514
RsaNI	GTAC	6 cut(s)	163, 270, 597, 801, 1041, 1513
RseI	CAYNNNNRTG	4 cut(s)	452, 866, 1223, 1433
SacI	GAGCTC	1 cut(s)	1656
SapI	GCTCTTC	2 cut(s)	37, 560
SaqAI	TTAA	4 cut(s)	306, 390, 720, 1113
SatI	GCNGC	3 cut(s)	245, 789, 1705
Sau3AI	GATC	4 cut(s)	327, 393, 1000, 1227
Sau96I	GGNCC	6 cut(s)	10, 299, 519, 967, 1025, 1711
SchI	GAGTC	4 cut(s)	163, 586, 1127, 1279
ScrFI	CCNGG	6 cut(s)	297, 651, 988, 1332, 1664, 1709
SduI	GDGCHC	5 cut(s)	93, 202, 556, 1561, 1656
SexAI	ACCWGGT	1 cut(s)	1330
SfaNI	GCATC	2 cut(s)	201, 1428
SfcI	CTRYAG	3 cut(s)	901, 1089, 1386
Sfr274I	CTCGAG	1 cut(s)	1562
SinI	GGWCC	3 cut(s)	10, 967, 1711
SlaI	CTCGAG	1 cut(s)	1562
SmiMI	CAYNNNNRTG	4 cut(s)	452, 866, 1223, 1433
SmlI	CTYRAG	1 cut(s)	1562
SmoI	CTYRAG	1 cut(s)	1562
Sse9I	AATT	4 cut(s)	343, 477, 706, 935
SseBI	AGGCCT	1 cut(s)	747
SsiI	CCGC	1 cut(s)	348
SspI	AATATT	4 cut(s)	924, 1234, 1342, 1621
SspMI	CTAG	6 cut(s)	614, 627, 716, 813, 930, 1717
SstI	GAGCTC	1 cut(s)	1656
StuI	AGGCCT	1 cut(s)	747
StyD4I	CCNGG	6 cut(s)	295, 649, 986, 1330, 1662, 1707
StyI	CCWWGG	3 cut(s)	265, 748, 796
TaaI	ACNGT	4 cut(s)	58, 361, 1064, 1093
TaiI	ACGT	2 cut(s)	83, 107
TaqI	TCGA	4 cut(s)	700, 972, 1563, 1629
TasI	AATT	4 cut(s)	343, 477, 706, 935
TfiI	GAWTC	4 cut(s)	292, 697, 753, 983
Tru1I	TTAA	4 cut(s)	306, 390, 720, 1113
Tru9I	TTAA	4 cut(s)	306, 390, 720, 1113
TscAI	CASTG	5 cut(s)	63, 202, 556, 1200, 1456
TseFI	GTSAC	2 cut(s)	184, 1271
TseI	GCWGC	3 cut(s)	244, 788, 1704
Tsp45I	GTSAC	2 cut(s)	184, 1271
TspDTI	ATGAA	9 cut(s)	220, 305, 531, 652, 755, 931, 1193, 1304, 1588
TspRI	CASTG	5 cut(s)	63, 202, 556, 1200, 1456
VneI	GTGCAC	1 cut(s)	198
VpaK11BI	GGWCC	3 cut(s)	10, 967, 1711
XapI	RAATTY	1 cut(s)	477
XceI	RCATGY	4 cut(s)	323, 1103, 1399, 1674
XcmI	CCANNNNNNNNNTGG	4 cut(s)	43, 454, 510, 731
XhoI	CTCGAG	1 cut(s)	1562
XmnI	GAANNNNTTC	1 cut(s)	757
XspI	CTAG	6 cut(s)	614, 627, 716, 813, 930, 1717
Zsp2I	ATGCAT	1 cut(s)	1101

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.