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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G53930 |
| fragaria_vesca | FvH4_3g19480 FvH4_3g19480 FvH4_3g19480 |
| malus_domestica | MD03G1231500.v1.1 MD11G1252600.v1.1 |
| prunus_persica | Prupe.4G176400_v2.0.a1 |
| pyrus_communis | pycom03g17910 pycom11g22400 |
| rosa_chinensis | RchiOBHm_Chr5g0032741 |
| rosa_laevigata | RLG00000033423 |
| rosa_multiflora | Rmu_ssc0000293.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00047360 Rroxscaffold_1G00047820 |
| rosa_rugosa | Rorug05G0133500 Rorug05G0133500 |
| rosa_samantha | Rh5AG226100 Rh5BG227200 Rh5CG255000 Rh5DG231900 |
| rosa_wichuraiana | Rw5G020730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 644 |
| AccI | GTMKAC | 1 cut(s) | 1539 |
| AccII | CGCG | 1 cut(s) | 660 |
| AciI | CCGC | 1 cut(s) | 660 |
| AcsI | RAATTY | 2 cut(s) | 738, 1033 |
| AcuI | CTGAAG | 1 cut(s) | 1275 |
| AdeI | CACNNNGTG | 1 cut(s) | 662 |
| AfaI | GTAC | 5 cut(s) | 230, 1165, 1279, 1306, 1478 |
| AflIII | ACRYGT | 1 cut(s) | 1051 |
| AgeI | ACCGGT | 1 cut(s) | 1189 |
| AgsI | TTSAA | 3 cut(s) | 372, 817, 953 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1503, 1535 |
| AluBI | AGCT | 8 cut(s) | 375, 813, 854, 905, 1158, 1220, 1235, 1313 |
| AluI | AGCT | 8 cut(s) | 375, 813, 854, 905, 1158, 1220, 1235, 1313 |
| Alw21I | GWGCWC | 1 cut(s) | 856 |
| Alw26I | GTCTC | 2 cut(s) | 343, 1434 |
| AoxI | GGCC | 1 cut(s) | 1554 |
| ApoI | RAATTY | 2 cut(s) | 738, 1033 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 743, 775, 1454, 1486 |
| AseI | ATTAAT | 1 cut(s) | 1059 |
| AsiGI | ACCGGT | 1 cut(s) | 1189 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 837, 1518 |
| AsuC2I | CCSGG | 1 cut(s) | 478 |
| AsuHPI | GGTGA | 6 cut(s) | 73, 629, 725, 1133, 1346, 1537 |
| AsuNHI | GCTAGC | 1 cut(s) | 1220 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 220, 253 |
| BanII | GRGCYC | 1 cut(s) | 856 |
| BbsI | GAAGAC | 3 cut(s) | 460, 912, 1374 |
| Bbv12I | GWGCWC | 1 cut(s) | 856 |
| BccI | CCATC | 5 cut(s) | 416, 426, 700, 704, 1265 |
| BcnI | CCSGG | 1 cut(s) | 478 |
| BcoDI | GTCTC | 2 cut(s) | 343, 1434 |
| BglII | AGATCT | 3 cut(s) | 194, 290, 1024 |
| BmcAI | AGTACT | 1 cut(s) | 1306 |
| Bme1390I | CCNGG | 1 cut(s) | 478 |
| BmrFI | CCNGG | 1 cut(s) | 478 |
| BmsI | GCATC | 1 cut(s) | 1240 |
| BmtI | GCTAGC | 1 cut(s) | 1224 |
| BpiI | GAAGAC | 3 cut(s) | 460, 912, 1374 |
| BpmI | CTGGAG | 1 cut(s) | 878 |
| BpuEI | CTTGAG | 1 cut(s) | 1049 |
| BpuMI | CCSGG | 1 cut(s) | 478 |
| Bsa29I | ATCGAT | 1 cut(s) | 584 |
| BsaBI | GATNNNNATC | 1 cut(s) | 264 |
| BsaI | GGTCTC | 1 cut(s) | 1434 |
| BsaJI | CCNNGG | 1 cut(s) | 1131 |
| BsaWI | WCCGGW | 1 cut(s) | 1189 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 472, 502, 1503, 1533 |
| Bse118I | RCCGGY | 1 cut(s) | 1189 |
| Bse8I | GATNNNNATC | 1 cut(s) | 264 |
| BseCI | ATCGAT | 1 cut(s) | 584 |
| BseDI | CCNNGG | 1 cut(s) | 1131 |
| BseGI | GGATG | 2 cut(s) | 310, 715 |
| BseJI | GATNNNNATC | 1 cut(s) | 264 |
| BseMII | CTCAG | 3 cut(s) | 549, 1392, 1445 |
| BseRI | GAGGAG | 1 cut(s) | 1418 |
| Bsh1236I | CGCG | 1 cut(s) | 660 |
| Bsh1285I | CGRYCG | 1 cut(s) | 59 |
| BshFI | GGCC | 1 cut(s) | 1556 |
| BshTI | ACCGGT | 1 cut(s) | 1189 |
| BshVI | ATCGAT | 1 cut(s) | 584 |
| BsiEI | CGRYCG | 1 cut(s) | 59 |
| BsiHKAI | GWGCWC | 1 cut(s) | 856 |
| BsiSI | CCGG | 2 cut(s) | 478, 1190 |
| BsmAI | GTCTC | 2 cut(s) | 343, 1434 |
| BsmBI | CGTCTC | 1 cut(s) | 343 |
| BsmI | GAATGC | 1 cut(s) | 533 |
| BsnI | GGCC | 1 cut(s) | 1556 |
| Bso31I | GGTCTC | 1 cut(s) | 1434 |
| Bsp1286I | GDGCHC | 1 cut(s) | 856 |
| Bsp1407I | TGTACA | 1 cut(s) | 1163 |
| Bsp143I | GATC | 7 cut(s) | 56, 194, 265, 290, 982, 1024, 1108 |
| BspACI | CCGC | 1 cut(s) | 660 |
| BspANI | GGCC | 1 cut(s) | 1556 |
| BspCNI | CTCAG | 3 cut(s) | 550, 1393, 1444 |
| BspDI | ATCGAT | 1 cut(s) | 584 |
| BspFNI | CGCG | 1 cut(s) | 660 |
| BspOI | GCTAGC | 1 cut(s) | 1224 |
| BspTNI | GGTCTC | 1 cut(s) | 1434 |
| BsrFI | RCCGGY | 1 cut(s) | 1189 |
| BsrGI | TGTACA | 1 cut(s) | 1163 |
| BssAI | RCCGGY | 1 cut(s) | 1189 |
| BssECI | CCNNGG | 1 cut(s) | 1131 |
| BssMI | GATC | 7 cut(s) | 56, 194, 265, 290, 982, 1024, 1108 |
| BssT1I | CCWWGG | 1 cut(s) | 1131 |
| Bst4CI | ACNGT | 5 cut(s) | 407, 641, 1282, 1476, 1498 |
| Bst6I | CTCTTC | 5 cut(s) | 68, 206, 218, 422, 1564 |
| BstAUI | TGTACA | 1 cut(s) | 1163 |
| BstC8I | GCNNGC | 2 cut(s) | 533, 1222 |
| BstDEI | CTNAG | 6 cut(s) | 294, 558, 1154, 1401, 1431, 1548 |
| BstF5I | GGATG | 2 cut(s) | 310, 715 |
| BstFNI | CGCG | 1 cut(s) | 660 |
| BstKTI | GATC | 7 cut(s) | 59, 197, 268, 293, 985, 1027, 1111 |
| BstMAI | GTCTC | 2 cut(s) | 343, 1434 |
| BstMBI | GATC | 7 cut(s) | 56, 194, 265, 290, 982, 1024, 1108 |
| BstMCI | CGRYCG | 1 cut(s) | 59 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 666, 1094, 1272 |
| BstNSI | RCATGY | 1 cut(s) | 1055 |
| BstSCI | CCNGG | 1 cut(s) | 476 |
| BstUI | CGCG | 1 cut(s) | 660 |
| BstV2I | GAAGAC | 3 cut(s) | 460, 912, 1374 |
| BstX2I | RGATCY | 3 cut(s) | 194, 290, 1024 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 896 |
| BstYI | RGATCY | 3 cut(s) | 194, 290, 1024 |
| Bsu15I | ATCGAT | 1 cut(s) | 584 |
| BsuRI | GGCC | 1 cut(s) | 1556 |
| BsuTUI | ATCGAT | 1 cut(s) | 584 |
| BtsCI | GGATG | 2 cut(s) | 310, 715 |
| BtsIMutI | CAGTG | 1 cut(s) | 1398 |
| Cac8I | GCNNGC | 2 cut(s) | 533, 1222 |
| Cfr10I | RCCGGY | 1 cut(s) | 1189 |
| ClaI | ATCGAT | 1 cut(s) | 584 |
| Csp6I | GTAC | 5 cut(s) | 229, 1164, 1278, 1305, 1477 |
| CspAI | ACCGGT | 1 cut(s) | 1189 |
| CviAII | CATG | 4 cut(s) | 980, 988, 1052, 1391 |
| CviQI | GTAC | 5 cut(s) | 229, 1164, 1278, 1305, 1477 |
| DdeI | CTNAG | 6 cut(s) | 294, 558, 1154, 1401, 1431, 1548 |
| DpnI | GATC | 7 cut(s) | 58, 196, 267, 292, 984, 1026, 1110 |
| DpnII | GATC | 7 cut(s) | 56, 194, 265, 290, 982, 1024, 1108 |
| DraI | TTTAAA | 2 cut(s) | 276, 1212 |
| DraIII | CACNNNGTG | 1 cut(s) | 662 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 644 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 644 |
| Eam1104I | CTCTTC | 5 cut(s) | 68, 206, 218, 422, 1564 |
| EarI | CTCTTC | 5 cut(s) | 68, 206, 218, 422, 1564 |
| Ecl136II | GAGCTC | 1 cut(s) | 854 |
| Eco130I | CCWWGG | 1 cut(s) | 1131 |
| Eco147I | AGGCCT | 1 cut(s) | 1556 |
| Eco24I | GRGCYC | 1 cut(s) | 856 |
| Eco31I | GGTCTC | 1 cut(s) | 1434 |
| Eco53kI | GAGCTC | 1 cut(s) | 854 |
| Eco57I | CTGAAG | 1 cut(s) | 1275 |
| EcoICRI | GAGCTC | 1 cut(s) | 854 |
| EcoRI | GAATTC | 2 cut(s) | 738, 1033 |
| EcoT14I | CCWWGG | 1 cut(s) | 1131 |
| EcoT38I | GRGCYC | 1 cut(s) | 856 |
| ErhI | CCWWGG | 1 cut(s) | 1131 |
| Esp3I | CGTCTC | 1 cut(s) | 343 |
| FaeI | CATG | 4 cut(s) | 983, 991, 1055, 1394 |
| FatI | CATG | 4 cut(s) | 979, 987, 1051, 1390 |
| FblI | GTMKAC | 1 cut(s) | 1539 |
| FokI | GGATG | 2 cut(s) | 317, 722 |
| FriOI | GRGCYC | 1 cut(s) | 856 |
| GsuI | CTGGAG | 1 cut(s) | 878 |
| HaeIII | GGCC | 1 cut(s) | 1556 |
| HapII | CCGG | 2 cut(s) | 478, 1190 |
| Hin1II | CATG | 4 cut(s) | 983, 991, 1055, 1394 |
| HincII | GTYRAC | 1 cut(s) | 1285 |
| HindII | GTYRAC | 1 cut(s) | 1285 |
| HpaII | CCGG | 2 cut(s) | 478, 1190 |
| HphI | GGTGA | 6 cut(s) | 73, 629, 725, 1133, 1346, 1537 |
| Hpy166II | GTNNAC | 3 cut(s) | 1285, 1337, 1540 |
| Hpy188I | TCNGA | 9 cut(s) | 108, 139, 163, 700, 781, 931, 958, 1039, 1438 |
| Hpy188III | TCNNGA | 5 cut(s) | 342, 735, 857, 1028, 1074 |
| Hpy8I | GTNNAC | 3 cut(s) | 1285, 1337, 1540 |
| Hpy99I | CGWCG | 1 cut(s) | 108 |
| HpyAV | CCTTC | 6 cut(s) | 295, 497, 567, 926, 1325, 1546 |
| HpyCH4III | ACNGT | 5 cut(s) | 407, 641, 1282, 1476, 1498 |
| HpyCH4IV | ACGT | 2 cut(s) | 312, 352 |
| HpyCH4V | TGCA | 1 cut(s) | 946 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 666, 1094, 1272 |
| HpyF3I | CTNAG | 6 cut(s) | 294, 558, 1154, 1401, 1431, 1548 |
| HpySE526I | ACGT | 2 cut(s) | 312, 352 |
| Hsp92II | CATG | 4 cut(s) | 983, 991, 1055, 1394 |
| Kzo9I | GATC | 7 cut(s) | 56, 194, 265, 290, 982, 1024, 1108 |
| LmnI | GCTCC | 1 cut(s) | 991 |
| LweI | GCATC | 1 cut(s) | 1240 |
| MaeII | ACGT | 2 cut(s) | 312, 352 |
| MaeIII | GTNAC | 6 cut(s) | 216, 883, 969, 1318, 1470, 1529 |
| MalI | GATC | 7 cut(s) | 58, 196, 267, 292, 984, 1026, 1110 |
| MboI | GATC | 7 cut(s) | 56, 194, 265, 290, 982, 1024, 1108 |
| MfeI | CAATTG | 1 cut(s) | 1449 |
| MflI | RGATCY | 3 cut(s) | 194, 290, 1024 |
| MhlI | GDGCHC | 1 cut(s) | 856 |
| MluCI | AATT | 8 cut(s) | 200, 604, 738, 948, 1033, 1090, 1291, 1449 |
| MlyI | GAGTC | 5 cut(s) | 689, 719, 977, 1388, 1478 |
| MmeI | TCCRAC | 2 cut(s) | 86, 480 |
| MroXI | GAANNNNTTC | 2 cut(s) | 837, 1518 |
| MseI | TTAA | 9 cut(s) | 111, 275, 468, 579, 867, 1059, 1065, 1137, 1211 |
| MspI | CCGG | 2 cut(s) | 478, 1190 |
| MspR9I | CCNGG | 1 cut(s) | 478 |
| MunI | CAATTG | 1 cut(s) | 1449 |
| Mva1269I | GAATGC | 1 cut(s) | 533 |
| MvnI | CGCG | 1 cut(s) | 660 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 666, 1094, 1272 |
| NciI | CCSGG | 1 cut(s) | 478 |
| NdeII | GATC | 7 cut(s) | 56, 194, 265, 290, 982, 1024, 1108 |
| NheI | GCTAGC | 1 cut(s) | 1220 |
| NlaIII | CATG | 4 cut(s) | 983, 991, 1055, 1394 |
| NmuCI | GTSAC | 4 cut(s) | 216, 883, 969, 1470 |
| NspI | RCATGY | 1 cut(s) | 1055 |
| PceI | AGGCCT | 1 cut(s) | 1556 |
| PciI | ACATGT | 1 cut(s) | 1051 |
| PctI | GAATGC | 1 cut(s) | 533 |
| PdmI | GAANNNNTTC | 2 cut(s) | 837, 1518 |
| PfoI | TCCNGGA | 1 cut(s) | 476 |
| PinAI | ACCGGT | 1 cut(s) | 1189 |
| Ple19I | CGATCG | 1 cut(s) | 59 |
| PleI | GAGTC | 5 cut(s) | 689, 719, 976, 1387, 1477 |
| PpsI | GAGTC | 5 cut(s) | 689, 719, 976, 1387, 1477 |
| PscI | ACATGT | 1 cut(s) | 1051 |
| PshBI | ATTAAT | 1 cut(s) | 1059 |
| Psp124BI | GAGCTC | 1 cut(s) | 856 |
| PsuI | RGATCY | 3 cut(s) | 194, 290, 1024 |
| PvuI | CGATCG | 1 cut(s) | 59 |
| RsaI | GTAC | 5 cut(s) | 230, 1165, 1279, 1306, 1478 |
| RsaNI | GTAC | 5 cut(s) | 229, 1164, 1278, 1305, 1477 |
| SacI | GAGCTC | 1 cut(s) | 856 |
| SaqAI | TTAA | 9 cut(s) | 111, 275, 468, 579, 867, 1059, 1065, 1137, 1211 |
| Sau3AI | GATC | 7 cut(s) | 56, 194, 265, 290, 982, 1024, 1108 |
| ScaI | AGTACT | 1 cut(s) | 1306 |
| SchI | GAGTC | 5 cut(s) | 689, 719, 977, 1388, 1478 |
| ScrFI | CCNGG | 1 cut(s) | 478 |
| SduI | GDGCHC | 1 cut(s) | 856 |
| SfaNI | GCATC | 1 cut(s) | 1240 |
| SmlI | CTYRAG | 1 cut(s) | 1028 |
| SmoI | CTYRAG | 1 cut(s) | 1028 |
| Sse9I | AATT | 8 cut(s) | 200, 604, 738, 948, 1033, 1090, 1291, 1449 |
| SseBI | AGGCCT | 1 cut(s) | 1556 |
| SsiI | CCGC | 1 cut(s) | 660 |
| SstI | GAGCTC | 1 cut(s) | 856 |
| StuI | AGGCCT | 1 cut(s) | 1556 |
| StyD4I | CCNGG | 1 cut(s) | 476 |
| StyI | CCWWGG | 1 cut(s) | 1131 |
| TaaI | ACNGT | 5 cut(s) | 407, 641, 1282, 1476, 1498 |
| TaiI | ACGT | 2 cut(s) | 315, 355 |
| TaqI | TCGA | 1 cut(s) | 584 |
| TasI | AATT | 8 cut(s) | 200, 604, 738, 948, 1033, 1090, 1291, 1449 |
| TatI | WGTACW | 2 cut(s) | 1163, 1304 |
| Tru1I | TTAA | 9 cut(s) | 111, 275, 468, 579, 867, 1059, 1065, 1137, 1211 |
| Tru9I | TTAA | 9 cut(s) | 111, 275, 468, 579, 867, 1059, 1065, 1137, 1211 |
| TscAI | CASTG | 1 cut(s) | 1405 |
| TseFI | GTSAC | 4 cut(s) | 216, 883, 969, 1470 |
| Tsp45I | GTSAC | 4 cut(s) | 216, 883, 969, 1470 |
| TspDTI | ATGAA | 6 cut(s) | 321, 540, 561, 1344, 1428, 1470 |
| TspGWI | ACGGA | 2 cut(s) | 235, 771 |
| TspRI | CASTG | 1 cut(s) | 1405 |
| VspI | ATTAAT | 1 cut(s) | 1059 |
| XapI | RAATTY | 2 cut(s) | 738, 1033 |
| XbaI | TCTAGA | 1 cut(s) | 734 |
| XceI | RCATGY | 1 cut(s) | 1055 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1177 |
| XmiI | GTMKAC | 1 cut(s) | 1539 |
| XmnI | GAANNNNTTC | 2 cut(s) | 837, 1518 |
| ZrmI | AGTACT | 1 cut(s) | 1306 |