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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G53930 |
| fragaria_vesca | FvH4_3g19480 FvH4_3g19480 FvH4_3g19480 |
| malus_domestica | MD03G1231500.v1.1 MD11G1252600.v1.1 |
| prunus_persica | Prupe.4G176400_v2.0.a1 |
| pyrus_communis | pycom03g17910 pycom11g22400 |
| rosa_chinensis | RchiOBHm_Chr5g0032741 |
| rosa_laevigata | RLG00000033423 |
| rosa_multiflora | Rmu_ssc0000293.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00047360 Rroxscaffold_1G00047820 |
| rosa_rugosa | Rorug05G0133500 Rorug05G0133500 |
| rosa_samantha | Rh5AG226100 Rh5BG227200 Rh5CG255000 Rh5DG231900 |
| rosa_wichuraiana | Rw5G020730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 602 |
| AccBSI | CCGCTC | 1 cut(s) | 1409 |
| AccII | CGCG | 1 cut(s) | 36 |
| AciI | CCGC | 2 cut(s) | 686, 1407 |
| AclWI | GGATC | 1 cut(s) | 111 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AfaI | GTAC | 2 cut(s) | 1641, 1693 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 388, 1107, 1141 |
| AflII | CTTAAG | 1 cut(s) | 1009 |
| AflIII | ACRYGT | 1 cut(s) | 832 |
| AgeI | ACCGGT | 1 cut(s) | 647 |
| AgsI | TTSAA | 5 cut(s) | 488, 985, 1124, 1381, 1673 |
| AhlI | ACTAGT | 1 cut(s) | 416 |
| AluBI | AGCT | 5 cut(s) | 180, 204, 444, 884, 1454 |
| AluI | AGCT | 5 cut(s) | 180, 204, 444, 884, 1454 |
| Alw26I | GTCTC | 4 cut(s) | 321, 995, 1178, 1237 |
| AlwI | GGATC | 1 cut(s) | 111 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1073, 1457 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 3 cut(s) | 297, 444, 1334 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1334, 1366 |
| AseI | ATTAAT | 1 cut(s) | 909 |
| AsiGI | ACCGGT | 1 cut(s) | 647 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 382, 910, 1119 |
| AspLEI | GCGC | 1 cut(s) | 603 |
| AsuC2I | CCSGG | 1 cut(s) | 1101 |
| AsuHPI | GGTGA | 3 cut(s) | 488, 662, 859 |
| BaeGI | GKGCMC | 1 cut(s) | 735 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BanII | GRGCYC | 2 cut(s) | 235, 280 |
| BbsI | GAAGAC | 2 cut(s) | 705, 1613 |
| BbvI | GCAGC | 3 cut(s) | 309, 431, 1321 |
| BccI | CCATC | 5 cut(s) | 30, 708, 722, 917, 1580 |
| BceAI | ACGGC | 2 cut(s) | 366, 903 |
| BclI | TGATCA | 1 cut(s) | 940 |
| BcnI | CCSGG | 1 cut(s) | 1101 |
| BcoDI | GTCTC | 4 cut(s) | 321, 995, 1178, 1237 |
| BcuI | ACTAGT | 1 cut(s) | 416 |
| BfaI | CTAG | 5 cut(s) | 411, 417, 585, 915, 1502 |
| BfrI | CTTAAG | 1 cut(s) | 1009 |
| BglII | AGATCT | 2 cut(s) | 581, 960 |
| BisI | GCNGC | 3 cut(s) | 298, 445, 1335 |
| BlsI | GCNGC | 3 cut(s) | 299, 446, 1336 |
| Bme1390I | CCNGG | 1 cut(s) | 1101 |
| BmiI | GGNNCC | 2 cut(s) | 928, 1404 |
| BmrFI | CCNGG | 1 cut(s) | 1101 |
| BmsI | GCATC | 5 cut(s) | 848, 886, 1486, 1567, 1611 |
| BpiI | GAAGAC | 2 cut(s) | 705, 1613 |
| BpmI | CTGGAG | 3 cut(s) | 1019, 1182, 1566 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1410, 1581 |
| BpuEI | CTTGAG | 1 cut(s) | 202 |
| BpuMI | CCSGG | 1 cut(s) | 1101 |
| BsaBI | GATNNNNATC | 3 cut(s) | 580, 673, 993 |
| BsaI | GGTCTC | 1 cut(s) | 1178 |
| BsaJI | CCNNGG | 2 cut(s) | 843, 1137 |
| BsaWI | WCCGGW | 1 cut(s) | 647 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 82, 112 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 388, 1107, 1141 |
| Bse118I | RCCGGY | 1 cut(s) | 647 |
| Bse1I | ACTGG | 2 cut(s) | 1078, 1199 |
| Bse3DI | GCAATG | 1 cut(s) | 664 |
| Bse8I | GATNNNNATC | 3 cut(s) | 580, 673, 993 |
| BseDI | CCNNGG | 2 cut(s) | 843, 1137 |
| BseGI | GGATG | 7 cut(s) | 166, 172, 217, 259, 733, 839, 1591 |
| BseJI | GATNNNNATC | 3 cut(s) | 580, 673, 993 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 388, 1107, 1141 |
| BseMI | GCAATG | 1 cut(s) | 664 |
| BseMII | CTCAG | 4 cut(s) | 555, 647, 1422, 1424 |
| BseNI | ACTGG | 2 cut(s) | 1078, 1199 |
| BseRI | GAGGAG | 4 cut(s) | 85, 326, 583, 679 |
| BseSI | GKGCMC | 1 cut(s) | 735 |
| BseXI | GCAGC | 3 cut(s) | 309, 431, 1321 |
| BsgI | GTGCAG | 1 cut(s) | 1320 |
| Bsh1236I | CGCG | 1 cut(s) | 36 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BshTI | ACCGGT | 1 cut(s) | 647 |
| BsiSI | CCGG | 2 cut(s) | 648, 1101 |
| BslFI | GGGAC | 1 cut(s) | 574 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 388, 1107, 1141 |
| BsmAI | GTCTC | 4 cut(s) | 321, 995, 1178, 1237 |
| BsmBI | CGTCTC | 1 cut(s) | 995 |
| BsmFI | GGGAC | 1 cut(s) | 574 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bso31I | GGTCTC | 1 cut(s) | 1178 |
| Bsp1286I | GDGCHC | 3 cut(s) | 235, 280, 735 |
| BspACI | CCGC | 2 cut(s) | 686, 1407 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspCNI | CTCAG | 4 cut(s) | 556, 646, 1423, 1423 |
| BspFNI | CGCG | 1 cut(s) | 36 |
| BspLI | GGNNCC | 2 cut(s) | 928, 1404 |
| BspPI | GGATC | 1 cut(s) | 111 |
| BspTI | CTTAAG | 1 cut(s) | 1009 |
| BspTNI | GGTCTC | 1 cut(s) | 1178 |
| BsrBI | CCGCTC | 1 cut(s) | 1409 |
| BsrDI | GCAATG | 1 cut(s) | 664 |
| BsrFI | RCCGGY | 1 cut(s) | 647 |
| BsrI | ACTGG | 2 cut(s) | 1078, 1199 |
| BssAI | RCCGGY | 1 cut(s) | 647 |
| BssECI | CCNNGG | 2 cut(s) | 843, 1137 |
| BssT1I | CCWWGG | 1 cut(s) | 1137 |
| Bst4CI | ACNGT | 5 cut(s) | 218, 791, 1474, 1517, 1596 |
| Bst6I | CTCTTC | 7 cut(s) | 19, 62, 266, 326, 368, 735, 1176 |
| BstAFI | CTTAAG | 1 cut(s) | 1009 |
| BstC8I | GCNNGC | 1 cut(s) | 1386 |
| BstDEI | CTNAG | 8 cut(s) | 51, 399, 564, 633, 1410, 1431, 1581, 1695 |
| BstF5I | GGATG | 7 cut(s) | 166, 172, 217, 259, 733, 839, 1591 |
| BstFNI | CGCG | 1 cut(s) | 36 |
| BstHHI | GCGC | 1 cut(s) | 603 |
| BstMAI | GTCTC | 4 cut(s) | 321, 995, 1178, 1237 |
| BstNSI | RCATGY | 1 cut(s) | 836 |
| BstSCI | CCNGG | 1 cut(s) | 1099 |
| BstSLI | GKGCMC | 1 cut(s) | 735 |
| BstUI | CGCG | 1 cut(s) | 36 |
| BstV1I | GCAGC | 3 cut(s) | 309, 431, 1321 |
| BstV2I | GAAGAC | 2 cut(s) | 705, 1613 |
| BstX2I | RGATCY | 3 cut(s) | 116, 581, 960 |
| BstYI | RGATCY | 3 cut(s) | 116, 581, 960 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtsCI | GGATG | 7 cut(s) | 166, 172, 217, 259, 733, 839, 1591 |
| BtsIMutI | CAGTG | 1 cut(s) | 1206 |
| Cac8I | GCNNGC | 1 cut(s) | 1386 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1073, 1457 |
| CfoI | GCGC | 1 cut(s) | 603 |
| Cfr10I | RCCGGY | 1 cut(s) | 647 |
| Csp6I | GTAC | 2 cut(s) | 1640, 1692 |
| CspAI | ACCGGT | 1 cut(s) | 647 |
| CviAII | CATG | 4 cut(s) | 833, 931, 944, 1612 |
| CviQI | GTAC | 2 cut(s) | 1640, 1692 |
| DdeI | CTNAG | 8 cut(s) | 51, 399, 564, 633, 1410, 1431, 1581, 1695 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 7 cut(s) | 19, 62, 266, 326, 368, 735, 1176 |
| EarI | CTCTTC | 7 cut(s) | 19, 62, 266, 326, 368, 735, 1176 |
| Eco130I | CCWWGG | 1 cut(s) | 1137 |
| Eco24I | GRGCYC | 2 cut(s) | 235, 280 |
| Eco31I | GGTCTC | 1 cut(s) | 1178 |
| EcoT14I | CCWWGG | 1 cut(s) | 1137 |
| EcoT38I | GRGCYC | 2 cut(s) | 235, 280 |
| ErhI | CCWWGG | 1 cut(s) | 1137 |
| Esp3I | CGTCTC | 1 cut(s) | 995 |
| FaeI | CATG | 4 cut(s) | 836, 934, 947, 1615 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 870, 902 |
| FaqI | GGGAC | 1 cut(s) | 574 |
| FatI | CATG | 4 cut(s) | 832, 930, 943, 1611 |
| FauI | CCCGC | 1 cut(s) | 1414 |
| FauNDI | CATATG | 1 cut(s) | 751 |
| FbaI | TGATCA | 1 cut(s) | 940 |
| Fnu4HI | GCNGC | 3 cut(s) | 298, 445, 1335 |
| FokI | GGATG | 7 cut(s) | 173, 179, 224, 266, 740, 826, 1598 |
| FriOI | GRGCYC | 2 cut(s) | 235, 280 |
| Fsp4HI | GCNGC | 3 cut(s) | 298, 445, 1335 |
| FspBI | CTAG | 5 cut(s) | 411, 417, 585, 915, 1502 |
| FspI | TGCGCA | 1 cut(s) | 602 |
| GlaI | GCGC | 1 cut(s) | 602 |
| GluI | GCNGC | 3 cut(s) | 298, 445, 1335 |
| GsuI | CTGGAG | 3 cut(s) | 1019, 1182, 1566 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HapII | CCGG | 2 cut(s) | 648, 1101 |
| HhaI | GCGC | 1 cut(s) | 603 |
| Hin1II | CATG | 4 cut(s) | 836, 934, 947, 1615 |
| Hin6I | GCGC | 1 cut(s) | 601 |
| HinP1I | GCGC | 1 cut(s) | 601 |
| HindIII | AAGCTT | 1 cut(s) | 178 |
| HpaII | CCGG | 2 cut(s) | 648, 1101 |
| HphI | GGTGA | 3 cut(s) | 488, 662, 859 |
| Hpy166II | GTNNAC | 4 cut(s) | 239, 1358, 1565, 1592 |
| Hpy8I | GTNNAC | 4 cut(s) | 239, 1358, 1565, 1592 |
| Hpy99I | CGWCG | 1 cut(s) | 135 |
| HpyCH4III | ACNGT | 5 cut(s) | 218, 791, 1474, 1517, 1596 |
| HpyCH4V | TGCA | 6 cut(s) | 839, 899, 1067, 1106, 1337, 1665 |
| HpyF3I | CTNAG | 8 cut(s) | 51, 399, 564, 633, 1410, 1431, 1581, 1695 |
| Hsp92II | CATG | 4 cut(s) | 836, 934, 947, 1615 |
| HspAI | GCGC | 1 cut(s) | 601 |
| Ksp22I | TGATCA | 1 cut(s) | 940 |
| LmnI | GCTCC | 3 cut(s) | 441, 804, 1537 |
| Lsp1109I | GCAGC | 3 cut(s) | 309, 431, 1321 |
| LweI | GCATC | 5 cut(s) | 848, 886, 1486, 1567, 1611 |
| MaeI | CTAG | 5 cut(s) | 411, 417, 585, 915, 1502 |
| MaeIII | GTNAC | 6 cut(s) | 134, 476, 643, 1069, 1426, 1474 |
| MbiI | CCGCTC | 1 cut(s) | 1409 |
| MflI | RGATCY | 3 cut(s) | 116, 581, 960 |
| MhlI | GDGCHC | 3 cut(s) | 235, 280, 735 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 3 cut(s) | 906, 910, 1115 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 5 cut(s) | 323, 443, 598, 625, 1124 |
| MmeI | TCCRAC | 2 cut(s) | 798, 1283 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MroXI | GAANNNNTTC | 3 cut(s) | 382, 910, 1119 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 4 cut(s) | 354, 909, 948, 1010 |
| MslI | CAYNNNNRTG | 3 cut(s) | 831, 948, 1616 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspCI | CTTAAG | 1 cut(s) | 1009 |
| MspI | CCGG | 2 cut(s) | 648, 1101 |
| MspR9I | CCNGG | 1 cut(s) | 1101 |
| MvnI | CGCG | 1 cut(s) | 36 |
| NciI | CCSGG | 1 cut(s) | 1101 |
| NdeI | CATATG | 1 cut(s) | 751 |
| NlaIII | CATG | 4 cut(s) | 836, 934, 947, 1615 |
| NlaIV | GGNNCC | 2 cut(s) | 928, 1404 |
| NmuCI | GTSAC | 4 cut(s) | 134, 476, 643, 1474 |
| NsbI | TGCGCA | 1 cut(s) | 602 |
| NspI | RCATGY | 1 cut(s) | 836 |
| PciI | ACATGT | 1 cut(s) | 832 |
| PdmI | GAANNNNTTC | 3 cut(s) | 382, 910, 1119 |
| PfeI | GAWTC | 5 cut(s) | 143, 170, 191, 488, 1208 |
| PflFI | GACNNNGTC | 1 cut(s) | 1612 |
| PinAI | ACCGGT | 1 cut(s) | 647 |
| PkrI | GCNGC | 3 cut(s) | 299, 446, 1336 |
| PleI | GAGTC | 5 cut(s) | 322, 442, 597, 625, 1124 |
| PpsI | GAGTC | 5 cut(s) | 322, 442, 597, 625, 1124 |
| PscI | ACATGT | 1 cut(s) | 832 |
| PshBI | ATTAAT | 1 cut(s) | 909 |
| PspN4I | GGNNCC | 2 cut(s) | 928, 1404 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1073, 1457 |
| PsuI | RGATCY | 3 cut(s) | 116, 581, 960 |
| PsyI | GACNNNGTC | 1 cut(s) | 1612 |
| RsaI | GTAC | 2 cut(s) | 1641, 1693 |
| RsaNI | GTAC | 2 cut(s) | 1640, 1692 |
| RseI | CAYNNNNRTG | 3 cut(s) | 831, 948, 1616 |
| SaqAI | TTAA | 4 cut(s) | 354, 909, 948, 1010 |
| SatI | GCNGC | 3 cut(s) | 298, 445, 1335 |
| SchI | GAGTC | 5 cut(s) | 323, 443, 598, 625, 1124 |
| ScrFI | CCNGG | 1 cut(s) | 1101 |
| SduI | GDGCHC | 3 cut(s) | 235, 280, 735 |
| SfaNI | GCATC | 5 cut(s) | 848, 886, 1486, 1567, 1611 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 831, 948, 1616 |
| SmlI | CTYRAG | 2 cut(s) | 181, 1009 |
| SmoI | CTYRAG | 2 cut(s) | 181, 1009 |
| SpeI | ACTAGT | 1 cut(s) | 416 |
| Sse9I | AATT | 3 cut(s) | 906, 910, 1115 |
| SsiI | CCGC | 2 cut(s) | 686, 1407 |
| SspMI | CTAG | 5 cut(s) | 411, 417, 585, 915, 1502 |
| StyD4I | CCNGG | 1 cut(s) | 1099 |
| StyI | CCWWGG | 1 cut(s) | 1137 |
| TaaI | ACNGT | 5 cut(s) | 218, 791, 1474, 1517, 1596 |
| TaqI | TCGA | 3 cut(s) | 58, 386, 449 |
| TasI | AATT | 3 cut(s) | 906, 910, 1115 |
| TatI | WGTACW | 1 cut(s) | 1691 |
| TfiI | GAWTC | 5 cut(s) | 143, 170, 191, 488, 1208 |
| Tru1I | TTAA | 4 cut(s) | 354, 909, 948, 1010 |
| Tru9I | TTAA | 4 cut(s) | 354, 909, 948, 1010 |
| TscAI | CASTG | 1 cut(s) | 1206 |
| TseFI | GTSAC | 4 cut(s) | 134, 476, 643, 1474 |
| TseI | GCWGC | 3 cut(s) | 297, 444, 1334 |
| Tsp45I | GTSAC | 4 cut(s) | 134, 476, 643, 1474 |
| TspDTI | ATGAA | 3 cut(s) | 720, 966, 1239 |
| TspGWI | ACGGA | 1 cut(s) | 813 |
| TspRI | CASTG | 1 cut(s) | 1206 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1612 |
| Vha464I | CTTAAG | 1 cut(s) | 1009 |
| VspI | ATTAAT | 1 cut(s) | 909 |
| XbaI | TCTAGA | 1 cut(s) | 1501 |
| XceI | RCATGY | 1 cut(s) | 836 |
| XmnI | GAANNNNTTC | 3 cut(s) | 382, 910, 1119 |
| XspI | CTAG | 5 cut(s) | 411, 417, 585, 915, 1502 |