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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G53930 |
| fragaria_vesca | FvH4_3g19480 FvH4_3g19480 FvH4_3g19480 |
| malus_domestica | MD03G1231500.v1.1 MD11G1252600.v1.1 |
| prunus_persica | Prupe.4G176400_v2.0.a1 |
| pyrus_communis | pycom03g17910 pycom11g22400 |
| rosa_chinensis | RchiOBHm_Chr5g0032741 |
| rosa_laevigata | RLG00000033423 |
| rosa_multiflora | Rmu_ssc0000293.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00047360 Rroxscaffold_1G00047820 |
| rosa_rugosa | Rorug05G0133500 Rorug05G0133500 |
| rosa_samantha | Rh5AG226100 Rh5BG227200 Rh5CG255000 Rh5DG231900 |
| rosa_wichuraiana | Rw5G020730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1138 |
| Acc16I | TGCGCA | 1 cut(s) | 711 |
| Acc36I | ACCTGC | 1 cut(s) | 1534 |
| AccII | CGCG | 3 cut(s) | 229, 231, 410 |
| AciI | CCGC | 3 cut(s) | 297, 450, 1091 |
| AclWI | GGATC | 4 cut(s) | 99, 894, 1023, 1747 |
| AcsI | RAATTY | 3 cut(s) | 1083, 1349, 1763 |
| AfaI | GTAC | 3 cut(s) | 25, 925, 1737 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 93, 1184, 1318, 1550 |
| AgsI | TTSAA | 8 cut(s) | 162, 172, 464, 509, 530, 1066, 1157, 1166 |
| AjnI | CCWGG | 4 cut(s) | 398, 487, 1006, 1178 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 311, 343, 1453, 1485 |
| AluBI | AGCT | 5 cut(s) | 115, 192, 860, 1502, 1676 |
| AluI | AGCT | 5 cut(s) | 115, 192, 860, 1502, 1676 |
| Alw21I | GWGCWC | 1 cut(s) | 425 |
| Alw26I | GTCTC | 1 cut(s) | 265 |
| AlwI | GGATC | 4 cut(s) | 99, 894, 1023, 1747 |
| Ama87I | CYCGRG | 1 cut(s) | 1544 |
| AoxI | GGCC | 4 cut(s) | 928, 1266, 1274, 1486 |
| ApeKI | GCWGC | 1 cut(s) | 294 |
| ApoI | RAATTY | 3 cut(s) | 1083, 1349, 1763 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1429, 1461 |
| AseI | ATTAAT | 1 cut(s) | 1335 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1161 |
| AspA2I | CCTAGG | 1 cut(s) | 374 |
| AspLEI | GCGC | 4 cut(s) | 231, 233, 410, 712 |
| AspS9I | GGNCC | 4 cut(s) | 928, 956, 1274, 1486 |
| AsuHPI | GGTGA | 9 cut(s) | 161, 464, 611, 1022, 1464, 1496, 1573, 1646, 1726 |
| AvaI | CYCGRG | 1 cut(s) | 1544 |
| AvaII | GGWCC | 1 cut(s) | 956 |
| AvrII | CCTAGG | 1 cut(s) | 374 |
| BaeGI | GKGCMC | 1 cut(s) | 1614 |
| BanII | GRGCYC | 2 cut(s) | 223, 268 |
| BbsI | GAAGAC | 1 cut(s) | 1116 |
| Bbv12I | GWGCWC | 1 cut(s) | 425 |
| BbvI | GCAGC | 1 cut(s) | 306 |
| BccI | CCATC | 5 cut(s) | 687, 691, 767, 932, 1676 |
| BceAI | ACGGC | 2 cut(s) | 105, 1123 |
| BciT130I | CCWGG | 4 cut(s) | 400, 489, 1008, 1180 |
| BciVI | GTATCC | 1 cut(s) | 694 |
| BcoDI | GTCTC | 1 cut(s) | 265 |
| BfaI | CTAG | 6 cut(s) | 234, 375, 549, 878, 1194, 1496 |
| BfmI | CTRYAG | 1 cut(s) | 657 |
| BfuAI | ACCTGC | 1 cut(s) | 1534 |
| BfuI | GTATCC | 1 cut(s) | 694 |
| BglII | AGATCT | 1 cut(s) | 653 |
| BisI | GCNGC | 1 cut(s) | 295 |
| BlnI | CCTAGG | 1 cut(s) | 374 |
| BlsI | GCNGC | 1 cut(s) | 296 |
| Bme1390I | CCNGG | 4 cut(s) | 400, 489, 1008, 1180 |
| Bme18I | GGWCC | 1 cut(s) | 956 |
| BmeT110I | CYCGRG | 1 cut(s) | 1544 |
| BmgT120I | GGNCC | 4 cut(s) | 928, 956, 1274, 1486 |
| BmiI | GGNNCC | 3 cut(s) | 1323, 1487, 1539 |
| BmrFI | CCNGG | 4 cut(s) | 400, 489, 1008, 1180 |
| BmsI | GCATC | 5 cut(s) | 232, 697, 1084, 1234, 1707 |
| BpiI | GAAGAC | 1 cut(s) | 1116 |
| BpuEI | CTTGAG | 2 cut(s) | 1263, 1501 |
| BsaJI | CCNNGG | 6 cut(s) | 51, 374, 1178, 1179, 1218, 1545 |
| BsaWI | WCCGGW | 2 cut(s) | 146, 1790 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 93, 1184, 1318, 1550 |
| BseBI | CCWGG | 4 cut(s) | 400, 489, 1008, 1180 |
| BseDI | CCNNGG | 6 cut(s) | 51, 374, 1178, 1179, 1218, 1545 |
| BseGI | GGATG | 9 cut(s) | 160, 247, 702, 712, 802, 814, 1214, 1231, 1799 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 93, 1184, 1318, 1550 |
| BseMII | CTCAG | 2 cut(s) | 207, 281 |
| BsePI | GCGCGC | 1 cut(s) | 229 |
| BseRI | GAGGAG | 2 cut(s) | 658, 1235 |
| BseSI | GKGCMC | 1 cut(s) | 1614 |
| BseXI | GCAGC | 1 cut(s) | 306 |
| BsgI | GTGCAG | 1 cut(s) | 598 |
| Bsh1236I | CGCG | 3 cut(s) | 229, 231, 410 |
| Bsh1285I | CGRYCG | 1 cut(s) | 227 |
| BshFI | GGCC | 4 cut(s) | 930, 1268, 1276, 1488 |
| BsiEI | CGRYCG | 1 cut(s) | 227 |
| BsiHKAI | GWGCWC | 1 cut(s) | 425 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1544 |
| BsiSI | CCGG | 2 cut(s) | 147, 1791 |
| BslFI | GGGAC | 3 cut(s) | 314, 550, 1782 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 93, 1184, 1318, 1550 |
| BsmAI | GTCTC | 1 cut(s) | 265 |
| BsmBI | CGTCTC | 1 cut(s) | 265 |
| BsmFI | GGGAC | 3 cut(s) | 314, 550, 1782 |
| BsnI | GGCC | 4 cut(s) | 930, 1268, 1276, 1488 |
| BsoBI | CYCGRG | 1 cut(s) | 1544 |
| Bsp1286I | GDGCHC | 4 cut(s) | 223, 268, 425, 1614 |
| Bsp143I | GATC | 8 cut(s) | 104, 224, 275, 653, 799, 886, 1015, 1752 |
| BspACI | CCGC | 3 cut(s) | 297, 450, 1091 |
| BspANI | GGCC | 4 cut(s) | 930, 1268, 1276, 1488 |
| BspCNI | CTCAG | 2 cut(s) | 206, 280 |
| BspFNI | CGCG | 3 cut(s) | 229, 231, 410 |
| BspLI | GGNNCC | 3 cut(s) | 1323, 1487, 1539 |
| BspMI | ACCTGC | 1 cut(s) | 1534 |
| BspPI | GGATC | 4 cut(s) | 99, 894, 1023, 1747 |
| BssECI | CCNNGG | 6 cut(s) | 51, 374, 1178, 1179, 1218, 1545 |
| BssHII | GCGCGC | 1 cut(s) | 229 |
| BssMI | GATC | 8 cut(s) | 104, 224, 275, 653, 799, 886, 1015, 1752 |
| BssT1I | CCWWGG | 1 cut(s) | 374 |
| Bst2UI | CCWGG | 4 cut(s) | 400, 489, 1008, 1180 |
| Bst4CI | ACNGT | 4 cut(s) | 667, 1609, 1634, 1692 |
| Bst6I | CTCTTC | 6 cut(s) | 19, 254, 314, 714, 818, 1257 |
| BstC8I | GCNNGC | 1 cut(s) | 231 |
| BstDEI | CTNAG | 4 cut(s) | 193, 267, 468, 540 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1316 |
| BstF5I | GGATG | 9 cut(s) | 160, 247, 702, 712, 802, 814, 1214, 1231, 1799 |
| BstFNI | CGCG | 3 cut(s) | 229, 231, 410 |
| BstHHI | GCGC | 4 cut(s) | 231, 233, 410, 712 |
| BstKTI | GATC | 8 cut(s) | 107, 227, 278, 656, 802, 889, 1018, 1755 |
| BstMAI | GTCTC | 1 cut(s) | 265 |
| BstMBI | GATC | 8 cut(s) | 104, 224, 275, 653, 799, 886, 1015, 1752 |
| BstMCI | CGRYCG | 1 cut(s) | 227 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 291 |
| BstNI | CCWGG | 4 cut(s) | 400, 489, 1008, 1180 |
| BstSCI | CCNGG | 4 cut(s) | 398, 487, 1006, 1178 |
| BstSFI | CTRYAG | 1 cut(s) | 657 |
| BstSLI | GKGCMC | 1 cut(s) | 1614 |
| BstUI | CGCG | 3 cut(s) | 229, 231, 410 |
| BstV1I | GCAGC | 1 cut(s) | 306 |
| BstV2I | GAAGAC | 1 cut(s) | 1116 |
| BstX2I | RGATCY | 4 cut(s) | 104, 653, 886, 1015 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 938 |
| BstYI | RGATCY | 4 cut(s) | 104, 653, 886, 1015 |
| BsuI | GTATCC | 1 cut(s) | 694 |
| BsuRI | GGCC | 4 cut(s) | 930, 1268, 1276, 1488 |
| BtsCI | GGATG | 9 cut(s) | 160, 247, 702, 712, 802, 814, 1214, 1231, 1799 |
| BtsI | GCAGTG | 3 cut(s) | 1143, 1351, 1440 |
| BtsIMutI | CAGTG | 3 cut(s) | 1143, 1351, 1440 |
| BveI | ACCTGC | 1 cut(s) | 1534 |
| Cac8I | GCNNGC | 1 cut(s) | 231 |
| CfoI | GCGC | 4 cut(s) | 231, 233, 410, 712 |
| Cfr13I | GGNCC | 4 cut(s) | 928, 956, 1274, 1486 |
| CseI | GACGC | 1 cut(s) | 399 |
| Csp6I | GTAC | 3 cut(s) | 24, 924, 1736 |
| CviAII | CATG | 2 cut(s) | 686, 883 |
| CviQI | GTAC | 3 cut(s) | 24, 924, 1736 |
| DdeI | CTNAG | 4 cut(s) | 193, 267, 468, 540 |
| DpnI | GATC | 8 cut(s) | 106, 226, 277, 655, 801, 888, 1017, 1754 |
| DpnII | GATC | 8 cut(s) | 104, 224, 275, 653, 799, 886, 1015, 1752 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1138 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1138 |
| Eam1104I | CTCTTC | 6 cut(s) | 19, 254, 314, 714, 818, 1257 |
| EarI | CTCTTC | 6 cut(s) | 19, 254, 314, 714, 818, 1257 |
| Eco130I | CCWWGG | 1 cut(s) | 374 |
| Eco24I | GRGCYC | 2 cut(s) | 223, 268 |
| Eco47I | GGWCC | 1 cut(s) | 956 |
| Eco88I | CYCGRG | 1 cut(s) | 1544 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1316 |
| EcoRII | CCWGG | 4 cut(s) | 398, 487, 1006, 1178 |
| EcoT14I | CCWWGG | 1 cut(s) | 374 |
| EcoT38I | GRGCYC | 2 cut(s) | 223, 268 |
| ErhI | CCWWGG | 1 cut(s) | 374 |
| Esp3I | CGTCTC | 1 cut(s) | 265 |
| FaeI | CATG | 2 cut(s) | 689, 886 |
| FaqI | GGGAC | 3 cut(s) | 314, 550, 1782 |
| FatI | CATG | 2 cut(s) | 685, 882 |
| FauI | CCCGC | 1 cut(s) | 290 |
| FauNDI | CATATG | 2 cut(s) | 628, 730 |
| Fnu4HI | GCNGC | 1 cut(s) | 295 |
| FokI | GGATG | 8 cut(s) | 167, 254, 709, 719, 809, 821, 1201, 1238 |
| FriOI | GRGCYC | 2 cut(s) | 223, 268 |
| Fsp4HI | GCNGC | 1 cut(s) | 295 |
| FspAI | RTGCGCAY | 1 cut(s) | 711 |
| FspBI | CTAG | 6 cut(s) | 234, 375, 549, 878, 1194, 1496 |
| FspI | TGCGCA | 1 cut(s) | 711 |
| GlaI | GCGC | 4 cut(s) | 230, 232, 409, 711 |
| GluI | GCNGC | 1 cut(s) | 295 |
| HaeIII | GGCC | 4 cut(s) | 930, 1268, 1276, 1488 |
| HapII | CCGG | 2 cut(s) | 147, 1791 |
| HgaI | GACGC | 1 cut(s) | 399 |
| HhaI | GCGC | 4 cut(s) | 231, 233, 410, 712 |
| Hin1II | CATG | 2 cut(s) | 689, 886 |
| Hin6I | GCGC | 4 cut(s) | 229, 231, 408, 710 |
| HinP1I | GCGC | 4 cut(s) | 229, 231, 408, 710 |
| HindIII | AAGCTT | 2 cut(s) | 113, 858 |
| HinfI | GANTC | 7 cut(s) | 131, 158, 302, 464, 942, 1022, 1172 |
| HpaII | CCGG | 2 cut(s) | 147, 1791 |
| HphI | GGTGA | 9 cut(s) | 161, 464, 611, 1022, 1464, 1496, 1573, 1646, 1726 |
| Hpy166II | GTNNAC | 1 cut(s) | 1143 |
| Hpy188I | TCNGA | 8 cut(s) | 52, 196, 270, 435, 609, 1219, 1594, 1657 |
| Hpy188III | TCNNGA | 7 cut(s) | 125, 162, 946, 1019, 1106, 1280, 1544 |
| Hpy8I | GTNNAC | 1 cut(s) | 1143 |
| Hpy99I | CGWCG | 2 cut(s) | 126, 415 |
| HpyAV | CCTTC | 5 cut(s) | 210, 232, 538, 756, 1544 |
| HpyCH4III | ACNGT | 4 cut(s) | 667, 1609, 1634, 1692 |
| HpyCH4V | TGCA | 5 cut(s) | 245, 579, 815, 1148, 1247 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 291 |
| HpyF3I | CTNAG | 4 cut(s) | 193, 267, 468, 540 |
| Hsp92II | CATG | 2 cut(s) | 689, 886 |
| HspAI | GCGC | 4 cut(s) | 229, 231, 408, 710 |
| Kzo9I | GATC | 8 cut(s) | 104, 224, 275, 653, 799, 886, 1015, 1752 |
| LmnI | GCTCC | 2 cut(s) | 41, 252 |
| Lsp1109I | GCAGC | 1 cut(s) | 306 |
| LweI | GCATC | 5 cut(s) | 232, 697, 1084, 1234, 1707 |
| MaeI | CTAG | 6 cut(s) | 234, 375, 549, 878, 1194, 1496 |
| MaeIII | GTNAC | 6 cut(s) | 125, 622, 661, 902, 1093, 1757 |
| MalI | GATC | 8 cut(s) | 106, 226, 277, 655, 801, 888, 1017, 1754 |
| MboI | GATC | 8 cut(s) | 104, 224, 275, 653, 799, 886, 1015, 1752 |
| MflI | RGATCY | 4 cut(s) | 104, 653, 886, 1015 |
| MhlI | GDGCHC | 4 cut(s) | 223, 268, 425, 1614 |
| MluCI | AATT | 7 cut(s) | 326, 637, 1026, 1083, 1157, 1349, 1763 |
| MlyI | GAGTC | 1 cut(s) | 296 |
| MmeI | TCCRAC | 2 cut(s) | 587, 774 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1161 |
| MseI | TTAA | 4 cut(s) | 519, 1031, 1335, 1434 |
| MspA1I | CMGCKG | 2 cut(s) | 297, 1091 |
| MspI | CCGG | 2 cut(s) | 147, 1791 |
| MspR9I | CCNGG | 4 cut(s) | 400, 489, 1008, 1180 |
| MvaI | CCWGG | 4 cut(s) | 400, 489, 1008, 1180 |
| MvnI | CGCG | 3 cut(s) | 229, 231, 410 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 291 |
| NdeI | CATATG | 2 cut(s) | 628, 730 |
| NdeII | GATC | 8 cut(s) | 104, 224, 275, 653, 799, 886, 1015, 1752 |
| NlaIII | CATG | 2 cut(s) | 689, 886 |
| NlaIV | GGNNCC | 3 cut(s) | 1323, 1487, 1539 |
| NmuCI | GTSAC | 3 cut(s) | 125, 622, 1757 |
| NsbI | TGCGCA | 1 cut(s) | 711 |
| PasI | CCCWGGG | 1 cut(s) | 1179 |
| PauI | GCGCGC | 1 cut(s) | 229 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1161 |
| PfeI | GAWTC | 6 cut(s) | 131, 158, 464, 942, 1022, 1172 |
| PfoI | TCCNGGA | 1 cut(s) | 398 |
| PkrI | GCNGC | 1 cut(s) | 296 |
| Ple19I | CGATCG | 1 cut(s) | 227 |
| PleI | GAGTC | 1 cut(s) | 296 |
| PpsI | GAGTC | 1 cut(s) | 296 |
| PshBI | ATTAAT | 1 cut(s) | 1335 |
| Psp6I | CCWGG | 4 cut(s) | 398, 487, 1006, 1178 |
| PspGI | CCWGG | 4 cut(s) | 398, 487, 1006, 1178 |
| PspN4I | GGNNCC | 3 cut(s) | 1323, 1487, 1539 |
| PspPI | GGNCC | 4 cut(s) | 928, 956, 1274, 1486 |
| PsuI | RGATCY | 4 cut(s) | 104, 653, 886, 1015 |
| PteI | GCGCGC | 1 cut(s) | 229 |
| PvuI | CGATCG | 1 cut(s) | 227 |
| RsaI | GTAC | 3 cut(s) | 25, 925, 1737 |
| RsaNI | GTAC | 3 cut(s) | 24, 924, 1736 |
| SaqAI | TTAA | 4 cut(s) | 519, 1031, 1335, 1434 |
| SatI | GCNGC | 1 cut(s) | 295 |
| Sau3AI | GATC | 8 cut(s) | 104, 224, 275, 653, 799, 886, 1015, 1752 |
| Sau96I | GGNCC | 4 cut(s) | 928, 956, 1274, 1486 |
| SchI | GAGTC | 1 cut(s) | 296 |
| ScrFI | CCNGG | 4 cut(s) | 400, 489, 1008, 1180 |
| SduI | GDGCHC | 4 cut(s) | 223, 268, 425, 1614 |
| SfaNI | GCATC | 5 cut(s) | 232, 697, 1084, 1234, 1707 |
| SfcI | CTRYAG | 1 cut(s) | 657 |
| SinI | GGWCC | 1 cut(s) | 956 |
| SmlI | CTYRAG | 2 cut(s) | 1278, 1480 |
| SmoI | CTYRAG | 2 cut(s) | 1278, 1480 |
| Sse9I | AATT | 7 cut(s) | 326, 637, 1026, 1083, 1157, 1349, 1763 |
| SsiI | CCGC | 3 cut(s) | 297, 450, 1091 |
| SspMI | CTAG | 6 cut(s) | 234, 375, 549, 878, 1194, 1496 |
| StyD4I | CCNGG | 4 cut(s) | 398, 487, 1006, 1178 |
| StyI | CCWWGG | 1 cut(s) | 374 |
| TaaI | ACNGT | 4 cut(s) | 667, 1609, 1634, 1692 |
| TaqI | TCGA | 4 cut(s) | 58, 223, 641, 1466 |
| TaqII | GACCGA | 1 cut(s) | 1133 |
| TasI | AATT | 7 cut(s) | 326, 637, 1026, 1083, 1157, 1349, 1763 |
| TfiI | GAWTC | 6 cut(s) | 131, 158, 464, 942, 1022, 1172 |
| Tru1I | TTAA | 4 cut(s) | 519, 1031, 1335, 1434 |
| Tru9I | TTAA | 4 cut(s) | 519, 1031, 1335, 1434 |
| TscAI | CASTG | 3 cut(s) | 1150, 1351, 1447 |
| TseFI | GTSAC | 3 cut(s) | 125, 622, 1757 |
| TseI | GCWGC | 1 cut(s) | 294 |
| Tsp45I | GTSAC | 3 cut(s) | 125, 622, 1757 |
| TspDTI | ATGAA | 2 cut(s) | 981, 1686 |
| TspGWI | ACGGA | 3 cut(s) | 719, 845, 1745 |
| TspRI | CASTG | 3 cut(s) | 1150, 1351, 1447 |
| VpaK11BI | GGWCC | 1 cut(s) | 956 |
| VspI | ATTAAT | 1 cut(s) | 1335 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1316 |
| XapI | RAATTY | 3 cut(s) | 1083, 1349, 1763 |
| XmaJI | CCTAGG | 1 cut(s) | 374 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1161 |
| XspI | CTAG | 6 cut(s) | 234, 375, 549, 878, 1194, 1496 |