AT5G58140

FMN binding blue light photoreceptor kinase protein serine threonine kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0004987
Physical Location & Seq
Forward (+)
23523825 .. 23533111
9287 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G58140.6

Sequence Viewer

Length: 2748 bp
ATGGAGAGGCCAAGAGCCCCTCCATCTCCTTTGAATGATGCGGAGTCATTAAGTGAACGTAGATCTCTTGAGATTTTCAACCCTTCGAGTGGAAAAGAGACACATGGATCAACTTCTTCTTCTTCAAAGCCTCCTCTTGATGGCAACAACAAAGGTAGTAGTAGTAAGTGGATGGAGTTTCAAGATTCCGCTAAGATTACAGAAAGAACCGCTGAATGGGGATTGTCAGCTGTTAAGCCGGATTCGGGAGACGATGGCATTAGTTTCAAGCTGTCCAGTGAAGTGGAACGAAGCAAGAACATGTCTAGGAGGTCATCCGAAGAATCTACATCTTCTGAATCAGGGGCCTTCCCTAGAGTATCCCAGGAGCTCAAAACTGCTCTATCCACGTTGCAGCAGACTTTTGTTGTCTCTGACGCTACACAGCCTCACTGTCCCATAGTCTATGCCAGCAGTGGATTCTTTACCATGACTGGTTATTCTTCCAAGGAAATTGTTGGAAGAAACTGCCGGTTTCTGCAAGGGCCAGACACCGACAAGAATGAGGTTGCCAAAATCAGAGATTGTGTCAAGAATGGAAAAAGTTACTGTGGAAGGCTGTTAAACTACAAAAAGGACGGAACTCCCTTCTGGAATCTTCTCACAGTCACTCCTATCAAGGACGACCAGGGCAATACCATCAAGTTCATTGGGATGCAGGTTGAAGTTAGCAAATACACAGAAGGGGTAAATGATAAAGCATTGAGGCCTAATGGACTCTCCAAATCCTTGATTCGATATGATGCTCGCCAGAAGGAGAAAGCTTTGGATTCCATCACAGAGGTTGTGCAAACTATAAGACATCGTAAGTCTCAAGTTCAGGAATCCGTGAGCAATGACACTATGGTAAAGCCTGATAGTTCTACTACACCTACACCTGGTAGACAAACAAGACAGTCAGATGAGGCTTCAAAGTCTTTCAGGACACCTGGACGTGTTTCTACTCCAACGGGGTCAAAGCTCAAAAGCTCGAATAACAGGCATGAAGATCTTTTACGTATGGAACCCGAAGAATTGATGTTGAGCACAGAAGTAATAGGGCAGAGGGACAGTTGGGACCTATCGGATAGAGAAAGGGATATACGCCAAGGGATTGATCTAGCTACCACTCTTGAGCGCATAGAGAAGAATTTCGTCATCAGTGATCCTCGTCTCCCTGATAATCCCATTATCTTTGCATCAGACAGCTTTCTTGAATTGACAGAGTATTCACGCGAGGAAATATTGGGGAGAAATTGTCGGTTTCTTCAGGGGCCAGAGACAGATCAAGCGACTGTCCAGAAGATAAGAGACGCAATTAGAGATCAGAGGGAGATTACTGTGCAGTTGATAAACTACACTAAAAGCGGAAAGAAATTCTGGAACTTATTCCACTTGCAACCTATGCGTGATCAGAAGGGAGAGCTTCAATACTTCATCGGTGTGCAGCTTGATGGAAGTGATCATGTAGAGCCCCTCCAAAATCGTTTGTCTGAGAGAACAGAGATGCAGAGTTCGAAATTGGTGAAAGCTACGGCAACAAATGTAGATGAAGCTGTCAGAGAGCTTCCAGATGCTAATACGCGGCCCGAAGACCTGTGGGCTGCACACTCGAAGCCTGTCTATCCTCTGCCTCACAATAAGGAGAGTACGTCCTGGAAAGCAATAAAAAAGATCCAAGCGAGTGGAGAAACAGTGGGACTACATCATTTCAAACCAATAAAACCGTTGGGCTCTGGTGATACTGGCAGTGTCCATTTGGTTGAGCTGAAGGGCACGGGTGAACTATATGCCATGAAAGCAATGGAGAAAACAATGATGTTGAATCGTAACAAGGCTCACCGAGCGTGCATCGAAAGGGAAATCATTTCCCTTCTGGATCATCCATTCCTTCCTACTCTCTACGCTTCTTTTCAGACCTCTACGCACGTCTGTTTGATTACAGACTTCTGCCCAGGTGGAGAGTTGTTTGCACTACTTGACAGACAACCTATGAAAATATTGACAGAAGACTCTGCAAGGTTCTATGCAGCAGAGGTTGTTATCGGCTTAGAATATCTTCACTGCTTAGGAATTGTATATCGAGACCTGAAGCCTGAGAATATACTGCTCAAGAAGGATGGACACATAGTATTGGCTGACTTTGATTTATCATTCATGACGACCTGCACACCCCAGCTTATTATTCCAGCTGCACCTAGCAAACGAAGGAGATCCAAAAGTCAACCACTACCCACATTTGTTGCAGAACCAAGTACCCAGTCAAACTCGTTCGTAGGAACTGAAGAATACATTGCGCCTGAGATAATCACGGGTGCTGGTCATACAAGTGCTATTGATTGGTGGGCACTGGGTATCTTGTTGTATGAGATGCTTTATGGTCGCACACCTTTCAGGGGTAAGAATAGGCAAAAGACATTTGCCAACATCTTGCACAAAGATCTCACTTTCCCCAGCAGTATCCCTGTGAGTCTTGTAGGTAGACAGTTGATCAACACGTTGTTAAATAGAGATCCGAGCAGTCGGTTAGGATCCAAAGGTGGGGCAAATGAGATAAAGCAGCATGCTTTCTTTCGCGGGATCAATTGGCCTCTCATACGAGGCATGAGTCCTCCACCACTGGATGCACCGTTGAGCATAATCGAAAAAGATCCGAATGCCAAAGATATAAAGTGGGAAGATGATGGAGTGCTTGTGAATTCTACGGACTTGGACATTGACCTCTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005794 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0007623 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0009657 GO:0009658 GO:0009719 GO:0009725 GO:0009735 GO:0009785 GO:0009881 GO:0009882 GO:0009898 GO:0009902 GO:0009903 GO:0009904 GO:0009986 GO:0009987 GO:0010033 GO:0010118 GO:0010119 GO:0010155 GO:0010181 GO:0010359 GO:0010360 GO:0010361 GO:0010362 GO:0012505 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019750 GO:0022898 GO:0023052 GO:0030522 GO:0032409 GO:0032410 GO:0032412 GO:0032413 GO:0032553 GO:0032879 GO:0034762 GO:0034763 GO:0034765 GO:0034766 GO:0035556 GO:0036094 GO:0036211 GO:0038023 GO:0042221 GO:0042802 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043271 GO:0043412 GO:0044070 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046777 GO:0048037 GO:0048511 GO:0048519 GO:0050662 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051051 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0051716 GO:0060089 GO:0065007 GO:0065009 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0071840 GO:0071944 GO:0097159 GO:0097367 GO:0098552 GO:0098562 GO:0104004 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1903792 GO:1903959 GO:1903960 GO:1904062
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAS_9 Pkinase

Protein Analysis

915

Amino Acids

102.47

Weight (kDa)

7.04

Isoelectric Point (pI)

44.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAS_9 PF13426 141 - 237 3.5e-20 PAS domain
PAS_3 PF08447 147 - 231 3.2e-09 PAS fold
PAS PF00989 147 - 232 3.8e-07 PAS fold
PAS_9 PF13426 399 - 491 1.8e-20 PAS domain
PAS_3 PF08447 403 - 488 6.2e-07 PAS fold
PAS PF00989 403 - 491 1.9e-07 PAS fold
Pkinase PF00069 579 - 864 8.6e-60 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 580 - 724 2.9e-17 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 688, 2192
AccI GTMKAC 2 cut(s) 922, 2500
AccII CGCG 3 cut(s) 1254, 1603, 2595
AciI CCGC 6 cut(s) 41, 189, 210, 1386, 1603, 2595
AcsI RAATTY 3 cut(s) 1168, 1394, 2716
AcuI CTGAAG 4 cut(s) 1271, 1808, 2129, 2322
AfaI GTAC 2 cut(s) 1669, 2275
AfiI CCNNNNNNNGG 7 cut(s) 89, 140, 216, 245, 917, 2414, 2559
AflIII ACRYGT 3 cut(s) 300, 973, 2514
AjiI CACGTC 2 cut(s) 974, 1948
AjnI CCWGG 6 cut(s) 363, 666, 916, 967, 1673, 1972
Alw21I GWGCWC 2 cut(s) 372, 1067
Alw26I GTCTC 8 cut(s) 92, 243, 415, 855, 1196, 1292, 1323, 2097
AoxI GGCC 7 cut(s) 8, 345, 524, 746, 1292, 1604, 2606
ApeKI GCWGC 6 cut(s) 394, 1465, 1622, 2048, 2210, 2578
ApoI RAATTY 3 cut(s) 1168, 1394, 2716
Asp700I GAANNNNTTC 3 cut(s) 1169, 1406, 2076
AspLEI GCGC 2 cut(s) 1158, 2317
AspS9I GGNCC 5 cut(s) 345, 524, 1096, 1292, 1605
AsuHPI GGTGA 4 cut(s) 1555, 1769, 1811, 1850
AsuII TTCGAA 1 cut(s) 1535
AvaII GGWCC 1 cut(s) 1096
BaeGI GKGCMC 2 cut(s) 1796, 2368
BamHI GGATCC 1 cut(s) 2549
BanII GRGCYC 4 cut(s) 19, 372, 1494, 1754
BarI GAAGNNNNNNTAC 2 cut(s) 1017, 1049
BbsI GAAGAC 2 cut(s) 1617, 2034
Bbv12I GWGCWC 2 cut(s) 372, 1067
BbvI GCAGC 6 cut(s) 406, 1477, 1609, 2060, 2197, 2590
BccI CCATC 9 cut(s) 31, 134, 166, 248, 686, 821, 1466, 2132, 2696
BceAI ACGGC 1 cut(s) 1569
BciT130I CCWGG 6 cut(s) 365, 668, 918, 969, 1675, 1974
BciVI GTATCC 2 cut(s) 370, 2489
BclI TGATCA 3 cut(s) 1429, 1480, 2508
BcoDI GTCTC 8 cut(s) 92, 243, 415, 855, 1196, 1292, 1323, 2097
BfaI CTAG 4 cut(s) 306, 354, 1139, 2217
BfuAI ACCTGC 2 cut(s) 688, 2192
BfuI GTATCC 2 cut(s) 370, 2489
BglII AGATCT 3 cut(s) 62, 1027, 2458
BisI GCNGC 7 cut(s) 395, 1466, 1604, 1623, 2049, 2211, 2579
BlsI GCNGC 7 cut(s) 396, 1467, 1605, 1624, 2050, 2212, 2580
Bme1390I CCNGG 6 cut(s) 365, 668, 918, 969, 1675, 1974
Bme18I GGWCC 1 cut(s) 1096
BmgBI CACGTC 2 cut(s) 974, 1948
BmgT120I GGNCC 5 cut(s) 345, 524, 1096, 1292, 1605
BmiI GGNNCC 5 cut(s) 346, 1044, 1097, 1293, 2551
BmrFI CCNGG 6 cut(s) 365, 668, 918, 969, 1675, 1974
BmrI ACTGGG 2 cut(s) 2272, 2378
BmsI GCATC 9 cut(s) 28, 684, 772, 1226, 1515, 1582, 1878, 2379, 2632
BmuI ACTGGG 2 cut(s) 2272, 2378
BpiI GAAGAC 2 cut(s) 1617, 2034
Bpu10I CCTNAGC 1 cut(s) 2086
Bpu14I TTCGAA 1 cut(s) 1535
BpuEI CTTGAG 4 cut(s) 89, 837, 1172, 2114
BsaAI YACGTR 1 cut(s) 1037
BsaI GGTCTC 1 cut(s) 2097
BsaJI CCNNGG 5 cut(s) 363, 486, 667, 1126, 1972
Bsc4I CCNNNNNNNGG 7 cut(s) 89, 140, 216, 245, 917, 2414, 2559
Bse118I RCCGGY 1 cut(s) 510
Bse1I ACTGG 6 cut(s) 276, 478, 1768, 2278, 2373, 2643
Bse3DI GCAATG 3 cut(s) 880, 1827, 2310
BseBI CCWGG 6 cut(s) 365, 668, 918, 969, 1675, 1974
BseDI CCNNGG 5 cut(s) 363, 486, 667, 1126, 1972
BseGI GGATG 6 cut(s) 177, 314, 699, 1900, 2143, 2647
BseLI CCNNNNNNNGG 7 cut(s) 89, 140, 216, 245, 917, 2414, 2559
BseMI GCAATG 3 cut(s) 880, 1827, 2310
BseMII CTCAG 3 cut(s) 1503, 2106, 2310
BseNI ACTGG 6 cut(s) 276, 478, 1768, 2278, 2373, 2643
BseRI GAGGAG 1 cut(s) 123
BseSI GKGCMC 2 cut(s) 1796, 2368
BseXI GCAGC 6 cut(s) 406, 1477, 1609, 2060, 2197, 2590
BseYI CCCAGC 2 cut(s) 2193, 2471
BsgI GTGCAG 5 cut(s) 1382, 1484, 1608, 2170, 2196
Bsh1236I CGCG 3 cut(s) 1254, 1603, 2595
BshFI GGCC 7 cut(s) 10, 347, 526, 748, 1294, 1606, 2608
BsiHKAI GWGCWC 2 cut(s) 372, 1067
BsiSI CCGG 2 cut(s) 239, 511
BslFI GGGAC 4 cut(s) 420, 1100, 1109, 1731
BslI CCNNNNNNNGG 7 cut(s) 89, 140, 216, 245, 917, 2414, 2559
BsmAI GTCTC 8 cut(s) 92, 243, 415, 855, 1196, 1292, 1323, 2097
BsmBI CGTCTC 3 cut(s) 243, 1196, 1323
BsmFI GGGAC 4 cut(s) 420, 1100, 1109, 1731
BsmI GAATGC 1 cut(s) 2680
BsnI GGCC 7 cut(s) 10, 347, 526, 748, 1294, 1606, 2608
Bso31I GGTCTC 1 cut(s) 2097
Bsp119I TTCGAA 1 cut(s) 1535
Bsp1286I GDGCHC 7 cut(s) 19, 372, 1067, 1494, 1754, 1796, 2368
BspACI CCGC 6 cut(s) 41, 189, 210, 1386, 1603, 2595
BspANI GGCC 7 cut(s) 10, 347, 526, 748, 1294, 1606, 2608
BspCNI CTCAG 3 cut(s) 1504, 2107, 2311
BspFNI CGCG 3 cut(s) 1254, 1603, 2595
BspHI TCATGA 1 cut(s) 2175
BspLI GGNNCC 5 cut(s) 346, 1044, 1097, 1293, 2551
BspMI ACCTGC 2 cut(s) 688, 2192
BspT104I TTCGAA 1 cut(s) 1535
BspTNI GGTCTC 1 cut(s) 2097
BsrDI GCAATG 3 cut(s) 880, 1827, 2310
BsrFI RCCGGY 1 cut(s) 510
BsrI ACTGG 6 cut(s) 276, 478, 1768, 2278, 2373, 2643
BssAI RCCGGY 1 cut(s) 510
BssECI CCNNGG 5 cut(s) 363, 486, 667, 1126, 1972
BssT1I CCWWGG 2 cut(s) 486, 1126
Bst2UI CCWGG 6 cut(s) 365, 668, 918, 969, 1675, 1974
BstAPI GCANNNNNTGC 1 cut(s) 1423
BstBAI YACGTR 1 cut(s) 1037
BstBI TTCGAA 1 cut(s) 1535
BstC8I GCNNGC 4 cut(s) 451, 787, 1867, 2583
BstDEI CTNAG 6 cut(s) 192, 1512, 2068, 2086, 2115, 2319
BstF5I GGATG 6 cut(s) 177, 314, 699, 1900, 2143, 2647
BstFNI CGCG 3 cut(s) 1254, 1603, 2595
BstHHI GCGC 2 cut(s) 1158, 2317
BstMAI GTCTC 8 cut(s) 92, 243, 415, 855, 1196, 1292, 1323, 2097
BstMWI GCNNNNNNNGC 3 cut(s) 1423, 1817, 1862
BstNI CCWGG 6 cut(s) 365, 668, 918, 969, 1675, 1974
BstNSI RCATGY 2 cut(s) 304, 2585
BstSCI CCNGG 6 cut(s) 363, 666, 916, 967, 1673, 1972
BstSLI GKGCMC 2 cut(s) 1796, 2368
BstSNI TACGTA 1 cut(s) 1037
BstUI CGCG 3 cut(s) 1254, 1603, 2595
BstV1I GCAGC 6 cut(s) 406, 1477, 1609, 2060, 2197, 2590
BstV2I GAAGAC 2 cut(s) 1617, 2034
BstX2I RGATCY 8 cut(s) 62, 1027, 1692, 2231, 2458, 2530, 2549, 2668
BstXI CCANNNNNNTGG 2 cut(s) 283, 1703
BstYI RGATCY 8 cut(s) 62, 1027, 1692, 2231, 2458, 2530, 2549, 2668
BsuI GTATCC 2 cut(s) 370, 2489
BsuRI GGCC 7 cut(s) 10, 347, 526, 748, 1294, 1606, 2608
BtrI CACGTC 2 cut(s) 974, 1948
BtsCI GGATG 6 cut(s) 177, 314, 699, 1900, 2143, 2647
BtsI GCAGTG 3 cut(s) 460, 1774, 2080
BtsIMutI CAGTG 9 cut(s) 283, 430, 460, 1186, 1719, 1774, 2080, 2366, 2636
BveI ACCTGC 2 cut(s) 688, 2192
Cac8I GCNNGC 4 cut(s) 451, 787, 1867, 2583
CciI TCATGA 1 cut(s) 2175
CfoI GCGC 2 cut(s) 1158, 2317
Cfr10I RCCGGY 1 cut(s) 510
Cfr13I GGNCC 5 cut(s) 345, 524, 1096, 1292, 1605
CseI GACGC 2 cut(s) 425, 1340
CsiI ACCWGGT 1 cut(s) 916
Csp6I GTAC 2 cut(s) 1668, 2274
CspCI CAANNNNNGTGG 2 cut(s) 2242, 2277
CviAII CATG 9 cut(s) 104, 301, 469, 1022, 1484, 1813, 2176, 2582, 2623
CviQI GTAC 2 cut(s) 1668, 2274
DdeI CTNAG 6 cut(s) 192, 1512, 2068, 2086, 2115, 2319
Ecl136II GAGCTC 1 cut(s) 370
Eco105I TACGTA 1 cut(s) 1037
Eco130I CCWWGG 2 cut(s) 486, 1126
Eco147I AGGCCT 1 cut(s) 748
Eco24I GRGCYC 4 cut(s) 19, 372, 1494, 1754
Eco31I GGTCTC 1 cut(s) 2097
Eco47I GGWCC 1 cut(s) 1096
Eco53kI GAGCTC 1 cut(s) 370
Eco57I CTGAAG 4 cut(s) 1271, 1808, 2129, 2322
EcoICRI GAGCTC 1 cut(s) 370
EcoO109I RGGNCCY 2 cut(s) 345, 1096
EcoRI GAATTC 1 cut(s) 2716
EcoRII CCWGG 6 cut(s) 363, 666, 916, 967, 1673, 1972
EcoT14I CCWWGG 2 cut(s) 486, 1126
EcoT38I GRGCYC 4 cut(s) 19, 372, 1494, 1754
ErhI CCWWGG 2 cut(s) 486, 1126
Esp3I CGTCTC 3 cut(s) 243, 1196, 1323
FaeI CATG 9 cut(s) 107, 304, 472, 1025, 1487, 1816, 2179, 2585, 2626
FaqI GGGAC 4 cut(s) 420, 1100, 1109, 1731
FatI CATG 9 cut(s) 103, 300, 468, 1021, 1483, 1812, 2175, 2581, 2622
FauI CCCGC 1 cut(s) 2588
FbaI TGATCA 3 cut(s) 1429, 1480, 2508
FblI GTMKAC 2 cut(s) 922, 2500
Fnu4HI GCNGC 7 cut(s) 395, 1466, 1604, 1623, 2049, 2211, 2579
FokI GGATG 6 cut(s) 184, 301, 706, 1887, 2150, 2654
FriOI GRGCYC 4 cut(s) 19, 372, 1494, 1754
Fsp4HI GCNGC 7 cut(s) 395, 1466, 1604, 1623, 2049, 2211, 2579
FspBI CTAG 4 cut(s) 306, 354, 1139, 2217
GlaI GCGC 2 cut(s) 1157, 2316
GluI GCNGC 7 cut(s) 395, 1466, 1604, 1623, 2049, 2211, 2579
GsaI CCCAGC 2 cut(s) 2197, 2475
HaeIII GGCC 7 cut(s) 10, 347, 526, 748, 1294, 1606, 2608
HapII CCGG 2 cut(s) 239, 511
HgaI GACGC 2 cut(s) 425, 1340
HhaI GCGC 2 cut(s) 1158, 2317
Hin1II CATG 9 cut(s) 107, 304, 472, 1025, 1487, 1816, 2179, 2585, 2626
Hin6I GCGC 2 cut(s) 1156, 2315
HinP1I GCGC 2 cut(s) 1156, 2315
HincII GTYRAC 1 cut(s) 2243
HindII GTYRAC 1 cut(s) 2243
HindIII AAGCTT 1 cut(s) 801
HpaII CCGG 2 cut(s) 239, 511
HphI GGTGA 4 cut(s) 1555, 1769, 1811, 1850
Hpy166II GTNNAC 5 cut(s) 56, 923, 1802, 2243, 2501
Hpy8I GTNNAC 5 cut(s) 56, 923, 1802, 2243, 2501
HpyCH4IV ACGT 7 cut(s) 58, 389, 973, 1036, 1670, 1947, 2516
HpyF10VI GCNNNNNNNGC 3 cut(s) 1423, 1817, 1862
HpyF3I CTNAG 6 cut(s) 192, 1512, 2068, 2086, 2115, 2319
HpySE526I ACGT 7 cut(s) 58, 389, 973, 1036, 1670, 1947, 2516
Hsp92II CATG 9 cut(s) 107, 304, 472, 1025, 1487, 1816, 2179, 2585, 2626
HspAI GCGC 2 cut(s) 1156, 2315
Ksp22I TGATCA 3 cut(s) 1429, 1480, 2508
LmnI GCTCC 1 cut(s) 367
Lsp1109I GCAGC 6 cut(s) 406, 1477, 1609, 2060, 2197, 2590
LweI GCATC 9 cut(s) 28, 684, 772, 1226, 1515, 1582, 1878, 2379, 2632
MabI ACCWGGT 1 cut(s) 916
MaeI CTAG 4 cut(s) 306, 354, 1139, 2217
MaeII ACGT 7 cut(s) 58, 389, 973, 1036, 1670, 1947, 2516
MaeIII GTNAC 3 cut(s) 584, 646, 1847
MfeI CAATTG 1 cut(s) 2602
MflI RGATCY 8 cut(s) 62, 1027, 1692, 2231, 2458, 2530, 2549, 2668
MhlI GDGCHC 7 cut(s) 19, 372, 1067, 1494, 1754, 1796, 2368
MlyI GAGTC 5 cut(s) 53, 750, 2024, 2497, 2635
MmeI TCCRAC 2 cut(s) 478, 1010
MroXI GAANNNNTTC 3 cut(s) 1169, 1406, 2076
MseI TTAA 4 cut(s) 50, 234, 602, 2522
MslI CAYNNNNRTG 3 cut(s) 692, 1460, 2346
MspA1I CMGCKG 3 cut(s) 212, 230, 2210
MspI CCGG 2 cut(s) 239, 511
MspR9I CCNGG 6 cut(s) 365, 668, 918, 969, 1675, 1974
MunI CAATTG 1 cut(s) 2602
Mva1269I GAATGC 1 cut(s) 2680
MvaI CCWGG 6 cut(s) 365, 668, 918, 969, 1675, 1974
MvnI CGCG 3 cut(s) 1254, 1603, 2595
MwoI GCNNNNNNNGC 3 cut(s) 1423, 1817, 1862
NlaIII CATG 9 cut(s) 107, 304, 472, 1025, 1487, 1816, 2179, 2585, 2626
NlaIV GGNNCC 5 cut(s) 346, 1044, 1097, 1293, 2551
NmuCI GTSAC 1 cut(s) 646
NspI RCATGY 2 cut(s) 304, 2585
NspV TTCGAA 1 cut(s) 1535
PaeI GCATGC 1 cut(s) 2585
PagI TCATGA 1 cut(s) 2175
PceI AGGCCT 1 cut(s) 748
PciI ACATGT 1 cut(s) 300
PctI GAATGC 1 cut(s) 2680
PdmI GAANNNNTTC 3 cut(s) 1169, 1406, 2076
PfoI TCCNGGA 1 cut(s) 1673
PkrI GCNGC 7 cut(s) 396, 1467, 1605, 1624, 2050, 2212, 2580
PleI GAGTC 5 cut(s) 52, 750, 2024, 2496, 2634
PpsI GAGTC 5 cut(s) 52, 750, 2024, 2496, 2634
Ppu21I YACGTR 1 cut(s) 1037
PpuMI RGGWCCY 1 cut(s) 1096
PscI ACATGT 1 cut(s) 300
Psp124BI GAGCTC 1 cut(s) 372
Psp5II RGGWCCY 1 cut(s) 1096
Psp6I CCWGG 6 cut(s) 363, 666, 916, 967, 1673, 1972
PspFI CCCAGC 2 cut(s) 2193, 2471
PspGI CCWGG 6 cut(s) 363, 666, 916, 967, 1673, 1972
PspN4I GGNNCC 5 cut(s) 346, 1044, 1097, 1293, 2551
PspPI GGNCC 5 cut(s) 345, 524, 1096, 1292, 1605
PspPPI RGGWCCY 1 cut(s) 1096
PsuI RGATCY 8 cut(s) 62, 1027, 1692, 2231, 2458, 2530, 2549, 2668
PvuII CAGCTG 2 cut(s) 230, 2210
RsaI GTAC 2 cut(s) 1669, 2275
RsaNI GTAC 2 cut(s) 1668, 2274
RseI CAYNNNNRTG 3 cut(s) 692, 1460, 2346
SacI GAGCTC 1 cut(s) 372
SaqAI TTAA 4 cut(s) 50, 234, 602, 2522
SatI GCNGC 7 cut(s) 395, 1466, 1604, 1623, 2049, 2211, 2579
Sau96I GGNCC 5 cut(s) 345, 524, 1096, 1292, 1605
SchI GAGTC 5 cut(s) 53, 750, 2024, 2497, 2635
ScrFI CCNGG 6 cut(s) 365, 668, 918, 969, 1675, 1974
SduI GDGCHC 7 cut(s) 19, 372, 1067, 1494, 1754, 1796, 2368
SexAI ACCWGGT 1 cut(s) 916
SfaNI GCATC 9 cut(s) 28, 684, 772, 1226, 1515, 1582, 1878, 2379, 2632
SfuI TTCGAA 1 cut(s) 1535
SinI GGWCC 1 cut(s) 1096
SmiMI CAYNNNNRTG 3 cut(s) 692, 1460, 2346
SmlI CTYRAG 4 cut(s) 68, 852, 1151, 2129
SmoI CTYRAG 4 cut(s) 68, 852, 1151, 2129
SnaBI TACGTA 1 cut(s) 1037
SphI GCATGC 1 cut(s) 2585
SseBI AGGCCT 1 cut(s) 748
SsiI CCGC 6 cut(s) 41, 189, 210, 1386, 1603, 2595
SspI AATATT 2 cut(s) 1263, 2019
SspMI CTAG 4 cut(s) 306, 354, 1139, 2217
SstI GAGCTC 1 cut(s) 372
StuI AGGCCT 1 cut(s) 748
StyD4I CCNGG 6 cut(s) 363, 666, 916, 967, 1673, 1972
StyI CCWWGG 2 cut(s) 486, 1126
TaiI ACGT 7 cut(s) 61, 392, 976, 1039, 1673, 1950, 2519
TaqI TCGA 8 cut(s) 86, 775, 1010, 1535, 1631, 1872, 2101, 2661
TauI GCSGC 1 cut(s) 1606
Tru1I TTAA 4 cut(s) 50, 234, 602, 2522
Tru9I TTAA 4 cut(s) 50, 234, 602, 2522
TscAI CASTG 9 cut(s) 283, 437, 460, 1186, 1719, 1774, 2087, 2373, 2643
TseFI GTSAC 1 cut(s) 646
TseI GCWGC 6 cut(s) 394, 1465, 1622, 2048, 2210, 2578
Tsp45I GTSAC 1 cut(s) 646
TspDTI ATGAA 7 cut(s) 676, 1038, 1444, 1584, 1829, 2027, 2164
TspGWI ACGGA 3 cut(s) 633, 856, 2738
TspRI CASTG 9 cut(s) 283, 437, 460, 1186, 1719, 1774, 2087, 2373, 2643
VpaK11BI GGWCC 1 cut(s) 1096
XapI RAATTY 3 cut(s) 1168, 1394, 2716
XceI RCATGY 2 cut(s) 304, 2585
XcmI CCANNNNNNNNNTGG 1 cut(s) 1819
XmiI GTMKAC 2 cut(s) 922, 2500
XmnI GAANNNNTTC 3 cut(s) 1169, 1406, 2076
XspI CTAG 4 cut(s) 306, 354, 1139, 2217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.