Rh6CG257600

Phototropin-2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0004987
Physical Location & Seq
Reverse (-)
42937914 .. 42949219
11306 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG257600.1

Sequence Viewer

Length: 2118 bp
ATGCAGGTTGAGGTCAGCAAGTACACAGAAGGGGTGAATGAGAAGGCATTGAGGCCAAATGGGTTGTCCAAGTCACTAATCCGTTACGACGCTCGACAGAAGGAGAAGGCATTAGGCTCCATTGTTGAAGTTGTACAAACTGTGAAACATCCACGTTCTCACATGCAGGATGCTAGCAATGAGAATACTAAAAATCATGAAGAGCCGGATAACATGAACCTTAATTATGTTCTTCCAAAATCTGCTGCAATGAGTACACCTGTTAGAGAGACTCCTCAGGTGGATGTGAAGGGTGATGCAACTCAGGGGAGATTTTCCCAGGATGCGGGCAAAAATCCTAAAAAGTCAGGGCGCAGCCCCTCAATGGGATTTAGATCAAAGTCTCTAGGCTCTGGAGGCAGGCTTGAAAAAGAACCAAGTGTTGAACCAGAGGATTTGATGACCATAGATATAGAAAATGCTGATAGTTGGGACCGCACAGAAAGAGAAAGGGATATACGCCAAGGAATTGACCTAGCAACCACATTGGAACGCATTGAAAAGAACTTTGTGATTTCTGATCCTAGAATTCCTGATAATCCAATTATATTTGCATCTGATAGTTTTCTAGAACTGACGGAATATACACGTGAGGAAATTCTGGGAAGAAATTGTCGTTTTCTTCAAGGTCCTGAAACAGATCAAGCAACAGTCTCAAAAATAAGAGATGCCATCAGAGAACAACGGGAAATTACTGTACAGTTAATCAACTATACTAAGAGTGGAAAGAAGTTTTGGAATTTGTTCCACTTGCAACCCATGCGTGACCATAAGGGTGAACTTCAATATTTCATTGGTGTCCAATTGGATGGTAGTGATCATGTAGAACCTCTGCGAAATCGCCTGTCAGAGAGAGCAGAGCTAGAAAGTTCTAAAGTGGTGAAAGCCACTGCAGAAAATGTTAACGAGGCTGTCCGAGAACTTCCTGATGCCAACTTGAGACCAGAAGATCTGTGGGCAATTCATTCTCGTCCTGTCTTCCCAAGACCTCACAAAAGGGGTAGTGCTAGTTGGTTAGCAATACAAGAGATTACTTCACGTGGTGAAAAAATTGATCTGCATCATTTTAAGCCCATAAAACCCTTGGGTTGTGGTGATACTGGCAGTGTCCATTTGGTGGAACTACGAGGTACTTCTATACTGTTTGCTATGAAGGCAATGGAGAAATCAATAATGTTGAATCGTAACAAGGTTCACCGAGCATGCGCTGAACGGGAAATAATTTCACAACTGGATCATCCATTTCTTCCTACGCTATACACTTCATTTGAGACTTCTACACACGTTTGTTTGATAACAGACTTTTGCTCGGGCGGAGAGTTATTTGCTTTGCTTGATAAGCAGCCTATGAAATTCTTCAAGGAGGACTCTGCTAGGTTCTATGCTGCAGAGGTTGTCATTGCCTTGGAATATCTTCACTGTCTAGGTATAATTTATCGCGACCTTAAGCCTGAAAATATTTTACTCCAGAAGGATGGACATATTGTCTTAACAGACTTTGATTTATCATTTATGGCCTCCTGTAAACCACAGATTATAAGGCATCAATCACCTAAGAAGAGAAGGAGATCTAGTAGTCAACCACCACCAACATTTGTTGCAGAACCAGTTAATCAATCAAATTCCTTCGTTGGAACTGAAGAGTACATTGCTCCTGAAATTGTTACCGGTACAGGCCACAGCAGTGCTATTGATTGGTGGGCTCTTGGTATTTTGTTGTATGAGCTGCTATATGGCCGCACCCCTTTCAGGGGGAAAAACAGACAAAGAACATTCACCAACATTTTGCACAAAGATCTGACCTTTCCAAGTAGCATTCCGGTGAGCCTTGCAGCACGGCAGTTGATCAATGCGTTGTTGCAAAGAGACCCTGCCACACGTTTAGGATCCTCTACTGGTGCAAACGAAATCAAACAACATCCTTTTTTCCGTGGAATTACTTGGCCTTTGATCCGTTGCATGAGCCCTCCACCGTTAGAGGTGCCTCTTCAGCCTATTGGTTTTGATCCACAGGCCAAGGATATATCGTGGGAAGACGATGGGGTTCTTGTAAATTCAATGGATATGGATATTTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005794 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0007623 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0009657 GO:0009658 GO:0009719 GO:0009725 GO:0009735 GO:0009785 GO:0009881 GO:0009882 GO:0009898 GO:0009902 GO:0009903 GO:0009904 GO:0009986 GO:0009987 GO:0010033 GO:0010118 GO:0010119 GO:0010155 GO:0010181 GO:0010359 GO:0010360 GO:0010361 GO:0010362 GO:0012505 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019750 GO:0022898 GO:0023052 GO:0030522 GO:0032409 GO:0032410 GO:0032412 GO:0032413 GO:0032553 GO:0032879 GO:0034762 GO:0034763 GO:0034765 GO:0034766 GO:0035556 GO:0036094 GO:0036211 GO:0038023 GO:0042221 GO:0042802 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043271 GO:0043412 GO:0044070 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046777 GO:0048037 GO:0048511 GO:0048519 GO:0050662 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051051 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0051716 GO:0060089 GO:0065007 GO:0065009 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0071840 GO:0071944 GO:0097159 GO:0097367 GO:0098552 GO:0098562 GO:0104004 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1903792 GO:1903959 GO:1903960 GO:1904062
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAS_9 Pkinase

Protein Analysis

705

Amino Acids

79.81

Weight (kDa)

6.6

Isoelectric Point (pI)

48.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAS_9 PF13426 191 - 283 3.4e-20 PAS domain
PAS PF00989 195 - 283 4.2e-07 PAS fold
PAS_3 PF08447 195 - 280 1.2e-06 PAS fold
Pkinase PF00069 371 - 656 2e-60 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 372 - 519 8e-17 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1577
AccB1I GGYRCC 1 cut(s) 2020
AccB7I CCANNNNNTGG 1 cut(s) 1156
AccII CGCG 1 cut(s) 1479
AciI CCGC 4 cut(s) 326, 475, 1353, 1777
AclWI GGATC 6 cut(s) 554, 1281, 1920, 1933, 1984, 2039
AcoI YGGCCR 1 cut(s) 1774
AcsI RAATTY 6 cut(s) 567, 636, 778, 1391, 1660, 2092
AcuI CTGAAG 2 cut(s) 1698, 2012
AcvI CACGTG 2 cut(s) 629, 1079
AdeI CACNNNGTG 1 cut(s) 1082
AfaI GTAC 7 cut(s) 23, 135, 256, 738, 1171, 1685, 1711
AfiI CCNNNNNNNGG 7 cut(s) 325, 364, 365, 1156, 1788, 1789, 1790
AflII CTTAAG 1 cut(s) 1484
AflIII ACRYGT 3 cut(s) 626, 1321, 1916
AgeI ACCGGT 1 cut(s) 1706
AgsI TTSAA 9 cut(s) 128, 407, 425, 539, 665, 824, 1219, 1399, 2097
AhdI GACNNNNNGTC 1 cut(s) 1523
AjnI CCWGG 1 cut(s) 318
AjuI GAANNNNNNNTTGG 2 cut(s) 757, 789
AleI CACNNNNGTG 1 cut(s) 1722
AluBI AGCT 2 cut(s) 901, 1765
AluI AGCT 2 cut(s) 901, 1765
Alw26I GTCTC 6 cut(s) 263, 387, 697, 973, 1304, 1899
AlwI GGATC 6 cut(s) 554, 1281, 1920, 1933, 1984, 2039
Ama87I CYCGRG 1 cut(s) 1348
AoxI GGCC 6 cut(s) 53, 1554, 1714, 1774, 1982, 2052
ApeKI GCWGC 6 cut(s) 245, 354, 1381, 1424, 1765, 1871
ApoI RAATTY 6 cut(s) 567, 636, 778, 1391, 1660, 2092
ArsI GACNNNNNNTTYG 2 cut(s) 50, 82
AsiGI ACCGGT 1 cut(s) 1706
Asp700I GAANNNNTTC 3 cut(s) 782, 1394, 1452
AspLEI GCGC 2 cut(s) 354, 1247
AspS9I GGNCC 2 cut(s) 472, 668
AsuNHI GCTAGC 1 cut(s) 173
AvaI CYCGRG 1 cut(s) 1348
AvaII GGWCC 2 cut(s) 472, 668
AxyI CCTNAGG 1 cut(s) 276
BamHI GGATCC 1 cut(s) 1925
BanI GGYRCC 1 cut(s) 2020
BanII GRGCYC 2 cut(s) 1744, 2006
BbrPI CACGTG 2 cut(s) 629, 1079
BbsI GAAGAC 2 cut(s) 1009, 2079
BbvI GCAGC 6 cut(s) 232, 366, 1393, 1411, 1752, 1883
BccI CCATC 4 cut(s) 719, 842, 1508, 2072
BceAI ACGGC 1 cut(s) 1892
BciT130I CCWGG 1 cut(s) 320
BclI TGATCA 2 cut(s) 856, 1884
BcoDI GTCTC 6 cut(s) 263, 387, 697, 973, 1304, 1899
BfmI CTRYAG 2 cut(s) 930, 1425
BfrI CTTAAG 1 cut(s) 1484
BglII AGATCT 3 cut(s) 988, 1607, 1834
BisI GCNGC 7 cut(s) 246, 355, 1382, 1425, 1766, 1777, 1872
BlsI GCNGC 7 cut(s) 247, 356, 1383, 1426, 1767, 1778, 1873
Bme1390I CCNGG 1 cut(s) 320
Bme18I GGWCC 2 cut(s) 472, 668
BmeRI GACNNNNNGTC 1 cut(s) 1523
BmeT110I CYCGRG 1 cut(s) 1348
BmgT120I GGNCC 2 cut(s) 472, 668
BmiI GGNNCC 4 cut(s) 118, 473, 1927, 2022
BmrFI CCNGG 1 cut(s) 320
BmsI GCATC 8 cut(s) 160, 286, 313, 602, 697, 958, 1108, 1591
BmtI GCTAGC 1 cut(s) 177
BpiI GAAGAC 2 cut(s) 1009, 2079
BpmI CTGGAG 2 cut(s) 414, 1490
BpuEI CTTGAG 1 cut(s) 997
BsaAI YACGTR 2 cut(s) 629, 1079
BsaBI GATNNNNATC 2 cut(s) 373, 1098
BsaI GGTCTC 2 cut(s) 973, 1899
BsaJI CCNNGG 6 cut(s) 318, 502, 1122, 1443, 1969, 2055
BsaWI WCCGGW 2 cut(s) 1706, 1858
BsaXI ACNNNNNCTCC 2 cut(s) 1597, 1627
Bsc4I CCNNNNNNNGG 7 cut(s) 325, 364, 365, 1156, 1788, 1789, 1790
Bse118I RCCGGY 1 cut(s) 1706
Bse1I ACTGG 4 cut(s) 1144, 1275, 1646, 1939
Bse21I CCTNAGG 1 cut(s) 276
Bse3DI GCAATG 5 cut(s) 184, 255, 1203, 1437, 1686
Bse8I GATNNNNATC 2 cut(s) 373, 1098
BseBI CCWGG 1 cut(s) 320
BseDI CCNNGG 6 cut(s) 318, 502, 1122, 1443, 1969, 2055
BseGI GGATG 8 cut(s) 148, 175, 289, 328, 853, 1276, 1519, 1957
BseJI GATNNNNATC 2 cut(s) 373, 1098
BseLI CCNNNNNNNGG 7 cut(s) 325, 364, 365, 1156, 1788, 1789, 1790
BseMI GCAATG 5 cut(s) 184, 255, 1203, 1437, 1686
BseMII CTCAG 2 cut(s) 290, 317
BseNI ACTGG 4 cut(s) 1144, 1275, 1646, 1939
BseRI GAGGAG 1 cut(s) 264
BseXI GCAGC 6 cut(s) 232, 366, 1393, 1411, 1752, 1883
Bsh1236I CGCG 1 cut(s) 1479
BshFI GGCC 6 cut(s) 55, 1556, 1716, 1776, 1984, 2054
BshNI GGYRCC 1 cut(s) 2020
BshTI ACCGGT 1 cut(s) 1706
BsiHKCI CYCGRG 1 cut(s) 1348
BsiSI CCGG 3 cut(s) 206, 1707, 1859
BslFI GGGAC 1 cut(s) 485
BslI CCNNNNNNNGG 7 cut(s) 325, 364, 365, 1156, 1788, 1789, 1790
BsmAI GTCTC 6 cut(s) 263, 387, 697, 973, 1304, 1899
BsmFI GGGAC 1 cut(s) 485
BsmI GAATGC 1 cut(s) 1854
BsnI GGCC 6 cut(s) 55, 1556, 1716, 1776, 1984, 2054
Bso31I GGTCTC 2 cut(s) 973, 1899
BsoBI CYCGRG 1 cut(s) 1348
Bsp1286I GDGCHC 2 cut(s) 1744, 2006
Bsp1407I TGTACA 2 cut(s) 133, 736
Bsp68I TCGCGA 1 cut(s) 1479
BspACI CCGC 4 cut(s) 326, 475, 1353, 1777
BspANI GGCC 6 cut(s) 55, 1556, 1716, 1776, 1984, 2054
BspCNI CTCAG 2 cut(s) 289, 316
BspFNI CGCG 1 cut(s) 1479
BspHI TCATGA 1 cut(s) 196
BspLI GGNNCC 4 cut(s) 118, 473, 1927, 2022
BspMAI CTGCAG 2 cut(s) 934, 1429
BspOI GCTAGC 1 cut(s) 177
BspPI GGATC 6 cut(s) 554, 1281, 1920, 1933, 1984, 2039
BspQI GCTCTTC 1 cut(s) 195
BspT107I GGYRCC 1 cut(s) 2020
BspTI CTTAAG 1 cut(s) 1484
BspTNI GGTCTC 2 cut(s) 973, 1899
BsrDI GCAATG 5 cut(s) 184, 255, 1203, 1437, 1686
BsrFI RCCGGY 1 cut(s) 1706
BsrGI TGTACA 2 cut(s) 133, 736
BsrI ACTGG 4 cut(s) 1144, 1275, 1646, 1939
BssAI RCCGGY 1 cut(s) 1706
BssECI CCNNGG 6 cut(s) 318, 502, 1122, 1443, 1969, 2055
BssT1I CCWWGG 4 cut(s) 502, 1122, 1443, 2055
Bst2UI CCWGG 1 cut(s) 320
Bst4CI ACNGT 7 cut(s) 142, 691, 736, 741, 1182, 1460, 2013
Bst6I CTCTTC 4 cut(s) 195, 1592, 1674, 2031
BstAFI CTTAAG 1 cut(s) 1484
BstAPI GCANNNNNTGC 1 cut(s) 799
BstAUI TGTACA 2 cut(s) 133, 736
BstBAI YACGTR 2 cut(s) 629, 1079
BstC8I GCNNGC 4 cut(s) 175, 328, 401, 1243
BstDEI CTNAG 4 cut(s) 276, 303, 756, 1593
BstDSI CCRYGG 1 cut(s) 1969
BstF5I GGATG 8 cut(s) 148, 175, 289, 328, 853, 1276, 1519, 1957
BstFNI CGCG 1 cut(s) 1479
BstHHI GCGC 2 cut(s) 354, 1247
BstMAI GTCTC 6 cut(s) 263, 387, 697, 973, 1304, 1899
BstMWI GCNNNNNNNGC 5 cut(s) 396, 799, 1193, 1378, 2029
BstNI CCWGG 1 cut(s) 320
BstNSI RCATGY 2 cut(s) 166, 1245
BstSCI CCNGG 1 cut(s) 318
BstSFI CTRYAG 2 cut(s) 930, 1425
BstUI CGCG 1 cut(s) 1479
BstV1I GCAGC 6 cut(s) 232, 366, 1393, 1411, 1752, 1883
BstV2I GAAGAC 2 cut(s) 1009, 2079
BstX2I RGATCY 4 cut(s) 988, 1607, 1834, 1925
BstXI CCANNNNNNTGG 2 cut(s) 848, 1514
BstYI RGATCY 4 cut(s) 988, 1607, 1834, 1925
Bsu36I CCTNAGG 1 cut(s) 276
BsuRI GGCC 6 cut(s) 55, 1556, 1716, 1776, 1984, 2054
BtgI CCRYGG 1 cut(s) 1969
BtsCI GGATG 8 cut(s) 148, 175, 289, 328, 853, 1276, 1519, 1957
BtsI GCAGTG 3 cut(s) 927, 1150, 1729
BtsIMutI CAGTG 4 cut(s) 927, 1150, 1456, 1729
BtuMI TCGCGA 1 cut(s) 1479
Cac8I GCNNGC 4 cut(s) 175, 328, 401, 1243
CciI TCATGA 1 cut(s) 196
CfoI GCGC 2 cut(s) 354, 1247
Cfr10I RCCGGY 1 cut(s) 1706
Cfr13I GGNCC 2 cut(s) 472, 668
CseI GACGC 1 cut(s) 98
Csp6I GTAC 7 cut(s) 22, 134, 255, 737, 1170, 1684, 1710
CspAI ACCGGT 1 cut(s) 1706
CviAII CATG 7 cut(s) 163, 197, 214, 799, 860, 1242, 1999
CviQI GTAC 7 cut(s) 22, 134, 255, 737, 1170, 1684, 1710
DdeI CTNAG 4 cut(s) 276, 303, 756, 1593
DraIII CACNNNGTG 1 cut(s) 1082
DriI GACNNNNNGTC 1 cut(s) 1523
EaeI YGGCCR 1 cut(s) 1774
Eam1104I CTCTTC 4 cut(s) 195, 1592, 1674, 2031
Eam1105I GACNNNNNGTC 1 cut(s) 1523
EarI CTCTTC 4 cut(s) 195, 1592, 1674, 2031
EciI GGCGGA 1 cut(s) 1368
Eco130I CCWWGG 4 cut(s) 502, 1122, 1443, 2055
Eco24I GRGCYC 2 cut(s) 1744, 2006
Eco31I GGTCTC 2 cut(s) 973, 1899
Eco47I GGWCC 2 cut(s) 472, 668
Eco57I CTGAAG 2 cut(s) 1698, 2012
Eco72I CACGTG 2 cut(s) 629, 1079
Eco81I CCTNAGG 1 cut(s) 276
Eco88I CYCGRG 1 cut(s) 1348
EcoO109I RGGNCCY 1 cut(s) 668
EcoRI GAATTC 1 cut(s) 567
EcoRII CCWGG 1 cut(s) 318
EcoT14I CCWWGG 4 cut(s) 502, 1122, 1443, 2055
EcoT38I GRGCYC 2 cut(s) 1744, 2006
ErhI CCWWGG 4 cut(s) 502, 1122, 1443, 2055
FaeI CATG 7 cut(s) 166, 200, 217, 802, 863, 1245, 2002
FaqI GGGAC 1 cut(s) 485
FatI CATG 7 cut(s) 162, 196, 213, 798, 859, 1241, 1998
FauI CCCGC 1 cut(s) 319
FbaI TGATCA 2 cut(s) 856, 1884
Fnu4HI GCNGC 7 cut(s) 246, 355, 1382, 1425, 1766, 1777, 1872
FokI GGATG 8 cut(s) 135, 182, 296, 335, 860, 1263, 1526, 1944
FriOI GRGCYC 2 cut(s) 1744, 2006
Fsp4HI GCNGC 7 cut(s) 246, 355, 1382, 1425, 1766, 1777, 1872
GlaI GCGC 2 cut(s) 353, 1246
GluI GCNGC 7 cut(s) 246, 355, 1382, 1425, 1766, 1777, 1872
GsuI CTGGAG 2 cut(s) 414, 1490
HaeIII GGCC 6 cut(s) 55, 1556, 1716, 1776, 1984, 2054
HapII CCGG 3 cut(s) 206, 1707, 1859
HgaI GACGC 1 cut(s) 98
HhaI GCGC 2 cut(s) 354, 1247
Hin1II CATG 7 cut(s) 166, 200, 217, 802, 863, 1245, 2002
Hin6I GCGC 2 cut(s) 352, 1245
HinP1I GCGC 2 cut(s) 352, 1245
HincII GTYRAC 2 cut(s) 943, 1619
HindII GTYRAC 2 cut(s) 943, 1619
HinfI GANTC 3 cut(s) 271, 1219, 1406
HpaI GTTAAC 1 cut(s) 943
HpaII CCGG 3 cut(s) 206, 1707, 1859
Hpy166II GTNNAC 7 cut(s) 24, 257, 818, 943, 1234, 1565, 1619
Hpy188I TCNGA 6 cut(s) 559, 598, 716, 889, 956, 1839
Hpy188III TCNNGA 9 cut(s) 197, 393, 572, 608, 671, 965, 1478, 1507, 1694
Hpy8I GTNNAC 7 cut(s) 24, 257, 818, 943, 1234, 1565, 1619
Hpy99I CGWCG 1 cut(s) 92
HpyAV CCTTC 9 cut(s) 23, 37, 94, 100, 283, 1186, 1504, 1596, 1675
HpyCH4III ACNGT 7 cut(s) 142, 691, 736, 741, 1182, 1460, 2013
HpyCH4IV ACGT 5 cut(s) 154, 628, 1078, 1323, 1918
HpyF10VI GCNNNNNNNGC 5 cut(s) 396, 799, 1193, 1378, 2029
HpyF3I CTNAG 4 cut(s) 276, 303, 756, 1593
HpySE526I ACGT 5 cut(s) 154, 628, 1078, 1323, 1918
Hsp92II CATG 7 cut(s) 166, 200, 217, 802, 863, 1245, 2002
HspAI GCGC 2 cut(s) 352, 1245
Ksp22I TGATCA 2 cut(s) 856, 1884
KspAI GTTAAC 1 cut(s) 943
LguI GCTCTTC 1 cut(s) 195
LmnI GCTCC 2 cut(s) 122, 1696
Lsp1109I GCAGC 6 cut(s) 232, 366, 1393, 1411, 1752, 1883
LweI GCATC 8 cut(s) 160, 286, 313, 602, 697, 958, 1108, 1591
MaeII ACGT 5 cut(s) 154, 628, 1078, 1323, 1918
MaeIII GTNAC 5 cut(s) 72, 83, 803, 1223, 1702
MfeI CAATTG 1 cut(s) 842
MflI RGATCY 4 cut(s) 988, 1607, 1834, 1925
MhlI GDGCHC 2 cut(s) 1744, 2006
MlyI GAGTC 2 cut(s) 265, 1400
MmeI TCCRAC 1 cut(s) 1651
MroXI GAANNNNTTC 3 cut(s) 782, 1394, 1452
MseI TTAA 7 cut(s) 222, 743, 942, 1107, 1485, 1529, 1650
MslI CAYNNNNRTG 3 cut(s) 813, 1722, 1859
MspCI CTTAAG 1 cut(s) 1484
MspI CCGG 3 cut(s) 206, 1707, 1859
MspR9I CCNGG 1 cut(s) 320
MunI CAATTG 1 cut(s) 842
Mva1269I GAATGC 1 cut(s) 1854
MvaI CCWGG 1 cut(s) 320
MvnI CGCG 1 cut(s) 1479
MwoI GCNNNNNNNGC 5 cut(s) 396, 799, 1193, 1378, 2029
NheI GCTAGC 1 cut(s) 173
NlaIII CATG 7 cut(s) 166, 200, 217, 802, 863, 1245, 2002
NlaIV GGNNCC 4 cut(s) 118, 473, 1927, 2022
NmuCI GTSAC 2 cut(s) 72, 803
NruI TCGCGA 1 cut(s) 1479
NspI RCATGY 2 cut(s) 166, 1245
OliI CACNNNNGTG 1 cut(s) 1722
PaeI GCATGC 1 cut(s) 1245
PagI TCATGA 1 cut(s) 196
PciSI GCTCTTC 1 cut(s) 195
PctI GAATGC 1 cut(s) 1854
PdmI GAANNNNTTC 3 cut(s) 782, 1394, 1452
PfeI GAWTC 1 cut(s) 1219
PflMI CCANNNNNTGG 1 cut(s) 1156
PinAI ACCGGT 1 cut(s) 1706
PkrI GCNGC 7 cut(s) 247, 356, 1383, 1426, 1767, 1778, 1873
PleI GAGTC 2 cut(s) 265, 1400
PmaCI CACGTG 2 cut(s) 629, 1079
PmlI CACGTG 2 cut(s) 629, 1079
PpsI GAGTC 2 cut(s) 265, 1400
Ppu21I YACGTR 2 cut(s) 629, 1079
PpuMI RGGWCCY 1 cut(s) 668
PsiI TTATAA 1 cut(s) 1577
Psp5II RGGWCCY 1 cut(s) 668
Psp6I CCWGG 1 cut(s) 318
PspCI CACGTG 2 cut(s) 629, 1079
PspGI CCWGG 1 cut(s) 318
PspN4I GGNNCC 4 cut(s) 118, 473, 1927, 2022
PspPI GGNCC 2 cut(s) 472, 668
PspPPI RGGWCCY 1 cut(s) 668
PstI CTGCAG 2 cut(s) 934, 1429
PsuI RGATCY 4 cut(s) 988, 1607, 1834, 1925
RruI TCGCGA 1 cut(s) 1479
RsaI GTAC 7 cut(s) 23, 135, 256, 738, 1171, 1685, 1711
RsaNI GTAC 7 cut(s) 22, 134, 255, 737, 1170, 1684, 1710
RseI CAYNNNNRTG 3 cut(s) 813, 1722, 1859
SapI GCTCTTC 1 cut(s) 195
SaqAI TTAA 7 cut(s) 222, 743, 942, 1107, 1485, 1529, 1650
SatI GCNGC 7 cut(s) 246, 355, 1382, 1425, 1766, 1777, 1872
Sau96I GGNCC 2 cut(s) 472, 668
SchI GAGTC 2 cut(s) 265, 1400
ScrFI CCNGG 1 cut(s) 320
SduI GDGCHC 2 cut(s) 1744, 2006
SfaNI GCATC 8 cut(s) 160, 286, 313, 602, 697, 958, 1108, 1591
SfcI CTRYAG 2 cut(s) 930, 1425
SinI GGWCC 2 cut(s) 472, 668
SmiMI CAYNNNNRTG 3 cut(s) 813, 1722, 1859
SmlI CTYRAG 2 cut(s) 976, 1484
SmoI CTYRAG 2 cut(s) 976, 1484
SphI GCATGC 1 cut(s) 1245
SsiI CCGC 4 cut(s) 326, 475, 1353, 1777
SspI AATATT 2 cut(s) 827, 1498
StyD4I CCNGG 1 cut(s) 318
StyI CCWWGG 4 cut(s) 502, 1122, 1443, 2055
TaaI ACNGT 7 cut(s) 142, 691, 736, 741, 1182, 1460, 2013
TaiI ACGT 5 cut(s) 157, 631, 1081, 1326, 1921
TaqI TCGA 1 cut(s) 94
TatI WGTACW 5 cut(s) 21, 133, 254, 736, 1683
TauI GCSGC 1 cut(s) 1779
TfiI GAWTC 1 cut(s) 1219
Tru1I TTAA 7 cut(s) 222, 743, 942, 1107, 1485, 1529, 1650
Tru9I TTAA 7 cut(s) 222, 743, 942, 1107, 1485, 1529, 1650
TscAI CASTG 4 cut(s) 934, 1150, 1463, 1729
TseFI GTSAC 2 cut(s) 72, 803
TseI GCWGC 6 cut(s) 245, 354, 1381, 1424, 1765, 1871
Tsp45I GTSAC 2 cut(s) 72, 803
TspDTI ATGAA 7 cut(s) 213, 230, 820, 992, 1205, 1293, 1403
TspGWI ACGGA 4 cut(s) 71, 632, 1958, 1982
TspRI CASTG 4 cut(s) 934, 1150, 1463, 1729
Van91I CCANNNNNTGG 1 cut(s) 1156
Vha464I CTTAAG 1 cut(s) 1484
VpaK11BI GGWCC 2 cut(s) 472, 668
XapI RAATTY 6 cut(s) 567, 636, 778, 1391, 1660, 2092
XbaI TCTAGA 1 cut(s) 607
XceI RCATGY 2 cut(s) 166, 1245
XcmI CCANNNNNNNNNTGG 2 cut(s) 990, 1120
XmnI GAANNNNTTC 3 cut(s) 782, 1394, 1452
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.