Rorug06G0142500

Phototropin-2-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
20262175 .. 20265362
3188 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0142500.1

Sequence Viewer

Length: 2571 bp
ATGCACAATGTTTTAGGTCTTGGGGTGAAAGATGTTCGAATGGTAGGAATATGGGGTATGGGAGGTATAGGCAAGACAACAATTGCTAGGGCTGTTTATAATTCCCTTGCCTATAAGTTCGATGGCAGTTGTTTTCTAGAAAATGTTGCCAAAGAATCAATGCAGCATGGAGGCCTAGTCAGACTACAAAGTTACCTTCTGTATAAGATTCTAGGGGGGCAAAAACTAAAGCTGACAGATGTGGGTGAAGGGATGAGTGCGATACAGGACAGGCTACTTAAAAAAAGGGTTCTCTTAGTATTGGATGATGTGAACCAATTAGACCAGTTAAAAAAATTATGTGGGAGTTTTGAATGGTTTGGTATTGGCAGCAGAATCATCATAACAACAAGAAATAAACATTTGCTAACTACTCATCAAGTCAAACGGATACACACGATCAAGGAGTTGGACCATCAGGAAGCTTTGGAGCTCTTCATTGCAAATGCCTTCCCTAGAGAAAGACTTCCAGTTGATTATTCACAACTTGCAAGTGATGCAGTACATTATGCTCAAGGTCTCCCATCAGCTCTGATAGCTTTAGGTTCAGTTTTGTGTGGTAGACCTATAAAGGAATGGCAAGAGGAATTAAACACTCCATTTTACTCTCTTCAATCAGGTTATTTTGAAACTCTCCGAATAAGTTACAATAACTTGGAGGATTCGGTAAAGAATGTTTTCCTTGACATTGCATTTTTCTTCAACGATCAAGATGAGAACCATGTGTTACAGATCCTAGAAGGTGGTGACAAGCCTAACAAAAGTATTAGTGAGCTCAAAGAAAAGGCACTCATAAGGATTAATGAAAAAAATCATATCTTGATGCACAATATACTAGAAGTAATGGCTAAAGAGATAGTTCACATTGAGTCACCAAAGAACCCTGCTAGACGTAGCCGATTGTGGTTTTCTGATGATGTTTACGATGTTCTCACAAGATGCACGGGAACAGACAATATCAAAGGCGTCATGGTAATGTTTGGCGGACCACATGAGATAGCACTGCAAAATAAGAGCTTCGAGGGGATGACAAATCTTCAGTTCTTTATAAACACCGATGCACACTTTTCTGGAGACATTGAATATCTCCCCGACAAGTTAACACTTATTGATTGGCCTGAATTTCCCTTTGGATCATTTCCAATCAATTTTAATCCAACTAAGCTTGTTAAGCTTAGTATACCTCGTAGCCTCATCTCCCAACTGGGAGAGACATTCAAGAGTTGCAGTAACCTGAAATATATAAACTTGGAAAGCTGCCACTTCCTTACTAGAATTCCCGACTTGTCAGGATTCCCAAATTTAAAGGAGCTGAATCTTAACAATTGTACAAGCTTAGTTGAGGTTGATCAGTCTGTTGGACTTCTTGATAAGCTTGTTATTTTGAGTCTTTCTGGATGTGACAGACTCACTAGGTTTCCAAGAAGAATTGCCTTGATTTCAGTAAAATATATCAATCTGGGGGGTTGCAGATTGCTCGAGACATTCTGCGACATTCTGGAAAATGTGGTATCCTTGACAAGGCTGGATCTATCCGGCACGGCCATTGAAGAATTGCCTGAAACAGTTATATATCTCGTCAGCCTGAAACATTTAATTTTAAGACAATGTGATAAGCTTATCCATCTGCCACATAGCATTTATGATCTGCATAGTTTATCACGTCTTGATCTGCAGAACTGCTCAAAGCTTGTTACGCTTCCAAGGTGGAATGATGAGCAGTCAGTTTCGACTAACTTGAGGTTTCTTGACCTGCGTGGTTGCACAGAGCTTTCAGAAATTCCCGAACTTCCACCGAGCATGGAATGGATAAATGCCGATGGCTGTGAGTCATTGGTCCGAGTTGCAAAACTTTCAAACATCTTGGAACGTAGAGCTTCGCAAATGATTGAATCAATTTCATTGTATAATTGTCAGAGATTGTGTGACAATCTACCTCATTGTGGGGCAGGTAATAAGAGTAGTCTCTTCTCTCTCATTCACTTGGCTAAGCAGTCTGAATTCGAGATTGTATTTCCAGCAAGTGAAGTTCCTAGTTGGTTCAGGAATCGCAAGTATTTAATGGAGCTTTTTGATGAATGTGAATTTTCTTTTGAAATTCCTCTAAATTTCAACAAAGGATTGGCTATCTGTGCTTCAGCAACTGCTGTGGGTAATCTTGATCAGTGCTCTTTCACAGCCAGTATTCACATCAATGGAGAAAGCAGATGTACTTATTCATTTTGTTTCGAAGCAAGCAAGATGAAGGACTCTGCTCATGTATGGCTGCTCTATATTCCATTTGTTAAGTTTGCGTTTCATGAGCCACCTTATAGCTGCCTGGTTAATTTGAAACATACTAGTAAAGATTCGGTGCGCTGTAGAAGCTATGGGGTTCACCTGGTAATGCTACAGGATGAATATGAAGATTTCGTAGATGACAGCGACTTGGAAGATGAGTACTCAGCTGGTGAAAATGATGAAGACATGATAGATCAAATTGAGGACGGTGAAGATTTAGAAAATATCAGACCCAAAAAGAGAAGACGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005794 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0007623 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0009657 GO:0009658 GO:0009719 GO:0009725 GO:0009735 GO:0009785 GO:0009881 GO:0009882 GO:0009898 GO:0009902 GO:0009903 GO:0009904 GO:0009986 GO:0009987 GO:0010033 GO:0010118 GO:0010119 GO:0010155 GO:0010181 GO:0010359 GO:0010360 GO:0010361 GO:0010362 GO:0012505 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019750 GO:0022898 GO:0023052 GO:0030522 GO:0032409 GO:0032410 GO:0032412 GO:0032413 GO:0032553 GO:0032879 GO:0034762 GO:0034763 GO:0034765 GO:0034766 GO:0035556 GO:0036094 GO:0036211 GO:0038023 GO:0042221 GO:0042802 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043271 GO:0043412 GO:0044070 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046777 GO:0048037 GO:0048511 GO:0048519 GO:0050662 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051051 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0051716 GO:0060089 GO:0065007 GO:0065009 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0071840 GO:0071944 GO:0097159 GO:0097367 GO:0098552 GO:0098562 GO:0104004 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1903792 GO:1903959 GO:1903960 GO:1904062
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

856

Amino Acids

97.31

Weight (kDa)

5.69

Isoelectric Point (pI)

51.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 10 - 167 8.4e-21 NB-ARC domain
WHD_ROQ1 PF23282 237 - 301 7.9e-08 Disease resistance protein Roq1-like, winged-helix domain
LRR_14 PF23598 492 - 600 2.2e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 99, 1088
Acc36I ACCTGC 2 cut(s) 1800, 1979
AccI GTMKAC 2 cut(s) 601, 1219
AciI CCGC 1 cut(s) 1023
AclWI GGATC 3 cut(s) 766, 1180, 1575
AcoI YGGCCR 1 cut(s) 1581
AcsI RAATTY 8 cut(s) 1160, 1314, 1339, 1818, 2039, 2123, 2136, 2146
AcuI CTGAAG 2 cut(s) 1061, 2160
AcyI GRCGYC 1 cut(s) 1005
AfaI GTAC 4 cut(s) 543, 1369, 2251, 2480
AfiI CCNNNNNNNGG 2 cut(s) 1560, 1982
AhlI ACTAGT 1 cut(s) 2378
AjiI CACGTC 1 cut(s) 1703
AjnI CCWGG 2 cut(s) 2358, 2418
AjuI GAANNNNNNNTTGG 2 cut(s) 1152, 1184
Alw21I GWGCWC 3 cut(s) 474, 816, 2210
Alw26I GTCTC 5 cut(s) 563, 1107, 1244, 1514, 2009
AlwI GGATC 3 cut(s) 766, 1180, 1575
AlwNI CAGNNNCTG 1 cut(s) 2183
Ama87I CYCGRG 1 cut(s) 1517
AoxI GGCC 3 cut(s) 172, 1154, 1581
ApeKI GCWGC 5 cut(s) 163, 369, 1296, 2305, 2355
ApoI RAATTY 8 cut(s) 1160, 1314, 1339, 1818, 2039, 2123, 2136, 2146
AseI ATTAAT 1 cut(s) 840
Asp700I GAANNNNTTC 2 cut(s) 504, 716
AspLEI GCGC 1 cut(s) 2397
AspS9I GGNCC 3 cut(s) 451, 1025, 1876
AsuHPI GGTGA 7 cut(s) 37, 257, 797, 903, 2408, 2501, 2540
AsuII TTCGAA 2 cut(s) 37, 2268
AvaI CYCGRG 1 cut(s) 1517
AvaII GGWCC 3 cut(s) 451, 1025, 1876
BanII GRGCYC 2 cut(s) 474, 816
BbsI GAAGAC 1 cut(s) 2508
Bbv12I GWGCWC 3 cut(s) 474, 816, 2210
BbvI GCAGC 5 cut(s) 175, 381, 1283, 2292, 2342
BccI CCATC 5 cut(s) 116, 462, 571, 1671, 1853
BceAI ACGGC 1 cut(s) 1596
BcgI CGANNNNNNTGC 2 cut(s) 1498, 1532
BciT130I CCWGG 2 cut(s) 2360, 2420
BciVI GTATCC 2 cut(s) 423, 1561
BclI TGATCA 2 cut(s) 1387, 2200
BcoDI GTCTC 5 cut(s) 563, 1107, 1244, 1514, 2009
BcuI ACTAGT 1 cut(s) 2378
BfmI CTRYAG 3 cut(s) 1712, 2398, 2429
BfuAI ACCTGC 2 cut(s) 1800, 1979
BfuI GTATCC 2 cut(s) 423, 1561
BisI GCNGC 5 cut(s) 164, 370, 1297, 2306, 2356
BlpI GCTNAGC 1 cut(s) 2028
BlsI GCNGC 5 cut(s) 165, 371, 1298, 2307, 2357
BmcAI AGTACT 1 cut(s) 2480
Bme1390I CCNGG 2 cut(s) 2360, 2420
Bme18I GGWCC 3 cut(s) 451, 1025, 1876
BmeT110I CYCGRG 1 cut(s) 1517
BmgBI CACGTC 1 cut(s) 1703
BmgT120I GGNCC 3 cut(s) 451, 1025, 1876
BmrFI CCNGG 2 cut(s) 2360, 2420
BmrI ACTGGG 1 cut(s) 1253
BmsI GCATC 4 cut(s) 526, 852, 968, 1087
BmuI ACTGGG 1 cut(s) 1253
BpiI GAAGAC 1 cut(s) 2508
BpmI CTGGAG 1 cut(s) 1131
Bpu1102I GCTNAGC 1 cut(s) 2028
Bpu14I TTCGAA 2 cut(s) 37, 2268
BpuEI CTTGAG 2 cut(s) 537, 1798
BsaHI GRCGYC 1 cut(s) 1005
BsaI GGTCTC 1 cut(s) 563
BsaJI CCNNGG 1 cut(s) 1742
BsaXI ACNNNNNCTCC 2 cut(s) 162, 192
Bsc4I CCNNNNNNNGG 2 cut(s) 1560, 1982
Bse1I ACTGG 4 cut(s) 325, 509, 1248, 2220
Bse3DI GCAATG 2 cut(s) 477, 726
BseBI CCWGG 2 cut(s) 2360, 2420
BseDI CCNNGG 1 cut(s) 1742
BseGI GGATG 5 cut(s) 258, 310, 1071, 1442, 2440
BseLI CCNNNNNNNGG 2 cut(s) 1560, 1982
BseMI GCAATG 2 cut(s) 477, 726
BseMII CTCAG 1 cut(s) 2496
BseNI ACTGG 4 cut(s) 325, 509, 1248, 2220
BseXI GCAGC 5 cut(s) 175, 381, 1283, 2292, 2342
BshFI GGCC 3 cut(s) 174, 1156, 1583
BsiHKAI GWGCWC 3 cut(s) 474, 816, 2210
BsiHKCI CYCGRG 1 cut(s) 1517
BsiSI CCGG 1 cut(s) 1575
BslI CCNNNNNNNGG 2 cut(s) 1560, 1982
BsmAI GTCTC 5 cut(s) 563, 1107, 1244, 1514, 2009
BsnI GGCC 3 cut(s) 174, 1156, 1583
Bso31I GGTCTC 1 cut(s) 563
BsoBI CYCGRG 1 cut(s) 1517
Bsp119I TTCGAA 2 cut(s) 37, 2268
Bsp1286I GDGCHC 3 cut(s) 474, 816, 2210
Bsp1407I TGTACA 1 cut(s) 1367
Bsp1720I GCTNAGC 1 cut(s) 2028
BspACI CCGC 1 cut(s) 1023
BspANI GGCC 3 cut(s) 174, 1156, 1583
BspCNI CTCAG 1 cut(s) 2495
BspHI TCATGA 1 cut(s) 2338
BspMAI CTGCAG 1 cut(s) 1716
BspMI ACCTGC 2 cut(s) 1800, 1979
BspPI GGATC 3 cut(s) 766, 1180, 1575
BspQI GCTCTTC 1 cut(s) 479
BspT104I TTCGAA 2 cut(s) 37, 2268
BspTNI GGTCTC 1 cut(s) 563
BsrDI GCAATG 2 cut(s) 477, 726
BsrGI TGTACA 1 cut(s) 1367
BsrI ACTGG 4 cut(s) 325, 509, 1248, 2220
BssECI CCNNGG 1 cut(s) 1742
BssNAI GTATAC 1 cut(s) 1220
BssNI GRCGYC 1 cut(s) 1005
BssT1I CCWWGG 1 cut(s) 1742
Bst1107I GTATAC 1 cut(s) 1220
Bst2UI CCWGG 2 cut(s) 2360, 2420
Bst4CI ACNGT 2 cut(s) 1606, 2528
Bst6I CTCTTC 3 cut(s) 479, 654, 2012
BstACI GRCGYC 1 cut(s) 1005
BstAPI GCANNNNNTGC 1 cut(s) 536
BstAUI TGTACA 1 cut(s) 1367
BstBI TTCGAA 2 cut(s) 37, 2268
BstC8I GCNNGC 1 cut(s) 2275
BstDEI CTNAG 6 cut(s) 295, 1200, 1214, 1375, 2028, 2482
BstENI CCTNNNNNAGG 1 cut(s) 1558
BstF5I GGATG 5 cut(s) 258, 310, 1071, 1442, 2440
BstHHI GCGC 1 cut(s) 2397
BstMAI GTCTC 5 cut(s) 563, 1107, 1244, 1514, 2009
BstMWI GCNNNNNNNGC 6 cut(s) 536, 575, 1210, 1735, 2171, 2403
BstNI CCWGG 2 cut(s) 2360, 2420
BstSCI CCNGG 2 cut(s) 2358, 2418
BstSFI CTRYAG 3 cut(s) 1712, 2398, 2429
BstV1I GCAGC 5 cut(s) 175, 381, 1283, 2292, 2342
BstV2I GAAGAC 1 cut(s) 2508
BstX2I RGATCY 2 cut(s) 771, 1567
BstYI RGATCY 2 cut(s) 771, 1567
BstZ17I GTATAC 1 cut(s) 1220
BsuI GTATCC 2 cut(s) 423, 1561
BsuRI GGCC 3 cut(s) 174, 1156, 1583
BtrI CACGTC 1 cut(s) 1703
BtsCI GGATG 5 cut(s) 258, 310, 1071, 1442, 2440
BtsI GCAGTG 1 cut(s) 1040
BtsIMutI CAGTG 2 cut(s) 1040, 2210
BveI ACCTGC 2 cut(s) 1800, 1979
Cac8I GCNNGC 1 cut(s) 2275
CaiI CAGNNNCTG 1 cut(s) 2183
CciI TCATGA 1 cut(s) 2338
CfoI GCGC 1 cut(s) 2397
Cfr13I GGNCC 3 cut(s) 451, 1025, 1876
CseI GACGC 1 cut(s) 994
CsiI ACCWGGT 1 cut(s) 2418
Csp6I GTAC 4 cut(s) 542, 1368, 2250, 2479
CspCI CAANNNNNGTGG 2 cut(s) 2169, 2204
CviAII CATG 8 cut(s) 167, 761, 1009, 1031, 1840, 2297, 2339, 2506
CviQI GTAC 4 cut(s) 542, 1368, 2250, 2479
DdeI CTNAG 6 cut(s) 295, 1200, 1214, 1375, 2028, 2482
DraI TTTAAA 1 cut(s) 1344
EaeI YGGCCR 1 cut(s) 1581
Eam1104I CTCTTC 3 cut(s) 479, 654, 2012
EarI CTCTTC 3 cut(s) 479, 654, 2012
EciI GGCGGA 1 cut(s) 1038
Ecl136II GAGCTC 2 cut(s) 472, 814
Eco130I CCWWGG 1 cut(s) 1742
Eco147I AGGCCT 1 cut(s) 174
Eco24I GRGCYC 2 cut(s) 474, 816
Eco31I GGTCTC 1 cut(s) 563
Eco47I GGWCC 3 cut(s) 451, 1025, 1876
Eco53kI GAGCTC 2 cut(s) 472, 814
Eco57I CTGAAG 2 cut(s) 1061, 2160
Eco88I CYCGRG 1 cut(s) 1517
EcoICRI GAGCTC 2 cut(s) 472, 814
EcoNI CCTNNNNNAGG 1 cut(s) 1558
EcoRI GAATTC 2 cut(s) 1314, 2039
EcoRII CCWGG 2 cut(s) 2358, 2418
EcoT14I CCWWGG 1 cut(s) 1742
EcoT38I GRGCYC 2 cut(s) 474, 816
ErhI CCWWGG 1 cut(s) 1742
FaeI CATG 8 cut(s) 170, 764, 1012, 1034, 1843, 2300, 2342, 2509
FatI CATG 8 cut(s) 166, 760, 1008, 1030, 1839, 2296, 2338, 2505
FbaI TGATCA 2 cut(s) 1387, 2200
FblI GTMKAC 2 cut(s) 601, 1219
Fnu4HI GCNGC 5 cut(s) 164, 370, 1297, 2306, 2356
FokI GGATG 5 cut(s) 265, 317, 1078, 1449, 2447
FriOI GRGCYC 2 cut(s) 474, 816
Fsp4HI GCNGC 5 cut(s) 164, 370, 1297, 2306, 2356
GlaI GCGC 1 cut(s) 2396
GluI GCNGC 5 cut(s) 164, 370, 1297, 2306, 2356
GsuI CTGGAG 1 cut(s) 1131
HaeIII GGCC 3 cut(s) 174, 1156, 1583
HapII CCGG 1 cut(s) 1575
HgaI GACGC 1 cut(s) 994
HhaI GCGC 1 cut(s) 2397
Hin1I GRCGYC 1 cut(s) 1005
Hin1II CATG 8 cut(s) 170, 764, 1012, 1034, 1843, 2300, 2342, 2509
Hin6I GCGC 1 cut(s) 2395
HinP1I GCGC 1 cut(s) 2395
HincII GTYRAC 1 cut(s) 1140
HindII GTYRAC 1 cut(s) 1140
HindIII AAGCTT 7 cut(s) 462, 1202, 1211, 1372, 1412, 1655, 1727
HpaI GTTAAC 1 cut(s) 1140
HpaII CCGG 1 cut(s) 1575
HphI GGTGA 7 cut(s) 37, 257, 797, 903, 2408, 2501, 2540
Hpy166II GTNNAC 7 cut(s) 313, 602, 901, 961, 1140, 1220, 2416
Hpy188I TCNGA 9 cut(s) 182, 573, 677, 952, 1816, 1880, 1956, 2038, 2549
Hpy8I GTNNAC 7 cut(s) 313, 602, 901, 961, 1140, 1220, 2416
HpyAV CCTTC 5 cut(s) 206, 242, 499, 773, 2278
HpyCH4III ACNGT 2 cut(s) 1606, 2528
HpyCH4IV ACGT 3 cut(s) 931, 1702, 1909
HpyF10VI GCNNNNNNNGC 6 cut(s) 536, 575, 1210, 1735, 2171, 2403
HpyF3I CTNAG 6 cut(s) 295, 1200, 1214, 1375, 2028, 2482
HpySE526I ACGT 3 cut(s) 931, 1702, 1909
Hsp92I GRCGYC 1 cut(s) 1005
Hsp92II CATG 8 cut(s) 170, 764, 1012, 1034, 1843, 2300, 2342, 2509
HspAI GCGC 1 cut(s) 2395
Ksp22I TGATCA 2 cut(s) 1387, 2200
KspAI GTTAAC 1 cut(s) 1140
LguI GCTCTTC 1 cut(s) 479
LmnI GCTCC 3 cut(s) 469, 1348, 2104
Lsp1109I GCAGC 5 cut(s) 175, 381, 1283, 2292, 2342
LweI GCATC 4 cut(s) 526, 852, 968, 1087
MabI ACCWGGT 1 cut(s) 2418
MaeII ACGT 3 cut(s) 931, 1702, 1909
MaeIII GTNAC 9 cut(s) 191, 683, 765, 785, 909, 1268, 1439, 1732, 1964
MfeI CAATTG 2 cut(s) 81, 1363
MflI RGATCY 2 cut(s) 771, 1567
MhlI GDGCHC 3 cut(s) 474, 816, 2210
MlyI GAGTC 5 cut(s) 917, 1435, 1440, 1877, 2282
MmeI TCCRAC 3 cut(s) 429, 1220, 1378
MroXI GAANNNNTTC 2 cut(s) 504, 716
MslI CAYNNNNRTG 2 cut(s) 1013, 2232
MspA1I CMGCKG 1 cut(s) 2486
MspI CCGG 1 cut(s) 1575
MspR9I CCNGG 2 cut(s) 2360, 2420
MunI CAATTG 2 cut(s) 81, 1363
MvaI CCWGG 2 cut(s) 2360, 2420
MwoI GCNNNNNNNGC 6 cut(s) 536, 575, 1210, 1735, 2171, 2403
NlaIII CATG 8 cut(s) 170, 764, 1012, 1034, 1843, 2300, 2342, 2509
NmuCI GTSAC 4 cut(s) 785, 909, 1439, 1964
NspV TTCGAA 2 cut(s) 37, 2268
PaeR7I CTCGAG 1 cut(s) 1517
PagI TCATGA 1 cut(s) 2338
PceI AGGCCT 1 cut(s) 174
PciSI GCTCTTC 1 cut(s) 479
PdmI GAANNNNTTC 2 cut(s) 504, 716
PfeI GAWTC 9 cut(s) 155, 208, 375, 701, 1332, 1354, 1931, 2086, 2387
PkrI GCNGC 5 cut(s) 165, 371, 1298, 2307, 2357
PleI GAGTC 5 cut(s) 916, 1434, 1440, 1876, 2282
PpsI GAGTC 5 cut(s) 916, 1434, 1440, 1876, 2282
PshBI ATTAAT 1 cut(s) 840
PsiI TTATAA 2 cut(s) 99, 1088
Psp124BI GAGCTC 2 cut(s) 474, 816
Psp6I CCWGG 2 cut(s) 2358, 2418
PspGI CCWGG 2 cut(s) 2358, 2418
PspPI GGNCC 3 cut(s) 451, 1025, 1876
PstI CTGCAG 1 cut(s) 1716
PstNI CAGNNNCTG 1 cut(s) 2183
PsuI RGATCY 2 cut(s) 771, 1567
PvuII CAGCTG 1 cut(s) 2486
RsaI GTAC 4 cut(s) 543, 1369, 2251, 2480
RsaNI GTAC 4 cut(s) 542, 1368, 2250, 2479
RseI CAYNNNNRTG 2 cut(s) 1013, 2232
SacI GAGCTC 2 cut(s) 474, 816
SapI GCTCTTC 1 cut(s) 479
SatI GCNGC 5 cut(s) 164, 370, 1297, 2306, 2356
Sau96I GGNCC 3 cut(s) 451, 1025, 1876
ScaI AGTACT 1 cut(s) 2480
SchI GAGTC 5 cut(s) 917, 1435, 1440, 1877, 2282
ScrFI CCNGG 2 cut(s) 2360, 2420
SduI GDGCHC 3 cut(s) 474, 816, 2210
SexAI ACCWGGT 1 cut(s) 2418
SfaNI GCATC 4 cut(s) 526, 852, 968, 1087
SfcI CTRYAG 3 cut(s) 1712, 2398, 2429
Sfr274I CTCGAG 1 cut(s) 1517
SfuI TTCGAA 2 cut(s) 37, 2268
SinI GGWCC 3 cut(s) 451, 1025, 1876
SlaI CTCGAG 1 cut(s) 1517
SmiMI CAYNNNNRTG 2 cut(s) 1013, 2232
SmlI CTYRAG 3 cut(s) 552, 1517, 1777
SmoI CTYRAG 3 cut(s) 552, 1517, 1777
SpeI ACTAGT 1 cut(s) 2378
SseBI AGGCCT 1 cut(s) 174
SsiI CCGC 1 cut(s) 1023
SstI GAGCTC 2 cut(s) 474, 816
StuI AGGCCT 1 cut(s) 174
StyD4I CCNGG 2 cut(s) 2358, 2418
StyI CCWWGG 1 cut(s) 1742
TaaI ACNGT 2 cut(s) 1606, 2528
TaiI ACGT 3 cut(s) 934, 1705, 1912
TaqI TCGA 7 cut(s) 37, 120, 1059, 1518, 1769, 2043, 2268
TatI WGTACW 4 cut(s) 541, 1367, 2249, 2478
TfiI GAWTC 9 cut(s) 155, 208, 375, 701, 1332, 1354, 1931, 2086, 2387
TscAI CASTG 2 cut(s) 1047, 2210
TseFI GTSAC 4 cut(s) 785, 909, 1439, 1964
TseI GCWGC 5 cut(s) 163, 369, 1296, 2305, 2355
Tsp45I GTSAC 4 cut(s) 785, 909, 1439, 1964
TspGWI ACGGA 1 cut(s) 442
TspRI CASTG 2 cut(s) 1047, 2210
VpaK11BI GGWCC 3 cut(s) 451, 1025, 1876
VspI ATTAAT 1 cut(s) 840
XagI CCTNNNNNAGG 1 cut(s) 1558
XapI RAATTY 8 cut(s) 1160, 1314, 1339, 1818, 2039, 2123, 2136, 2146
XbaI TCTAGA 1 cut(s) 136
XhoI CTCGAG 1 cut(s) 1517
XmiI GTMKAC 2 cut(s) 601, 1219
XmnI GAANNNNTTC 2 cut(s) 504, 716
ZrmI AGTACT 1 cut(s) 2480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.