Rmu_ssc0000126.1_g000071

Phototropin-2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000126.1
OG0004987
Physical Location & Seq
Forward (+)
335421 .. 344500
9080 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000126.1_g000071.1.cds

Sequence Viewer

Length: 2874 bp
atggagaaaccagaggcagctggtggagataagcaggaattagcagcgcgaaagagcaatgatgttggagtacatcctagtagtaagctggaaagtggatcatcaagtacttcatttaagtggatggcattcgacacagaagcagctgaagagtctagcaacactgctgctgctgctgcttctggtgacgttgatggaattttagactcaaaaatcataacggagaaggcgagcatagtggcaaggacagcagaatggggagttgtggtgaagccggatgattctggtgaaggaacttttaaggccatagggaggtcatcagatgatggcaacaaaagcaaaaacacatcagggagatttgaatcaacaaggacatcatcagagtcaagtcatgggtctgatcagttgcctaatccaagggtgtcaagtgagttgaagacagctttggctacattgcagcagacttttgttgtgtctgatgccacaaagcctgattgcccaatcgtgtatgccagcagtggcttctttactatgactggttactcttcaaaagaggtcattggaagaaactgtcgctttcttcagggaccggaaacagaccagaatgaagtggccaaaatccgaaacgcagtcaaaactgggtctagctactgcggtaggctcttcaactacaagaaagatggcactcctttttggaatcttctcaccgtcaccccaatcaaagatgacaatggaaaaaccatcaagtttattggaatgcaggttgaggtcagcaagtacacagaaggggtgaatgagaaggcattgaggccaaatgggttgtccacgtcactaatccgttatgacgctcgacagaaggagaaagcattaggctccattgttgaagttgtacaaactgtgaaacatccacgttctcacatgcaggatgctagcaatgagaatactaaaaatcatgaagagccggataacatgaaccttaattatgttcttccaaaatctgctgcattgagtacacctgttagagagactcctcaggtggatgtgaagggtgatgcaactcgggggagattttcccaggatgcgggcaaaaatcctaaaaagtcagggcgcagcccctcaatgggatttagatcaaagtctctaggctctgaaggcaggcttgaaaaagaaccaagtgttgaaccagaggatttgatgaccatagatatagaaaatgctgatagttgggaccgcacagaaagggaaagggatatacgccaaggaattgacctagcaaccacattggaacgcattgaaaagaactttgtgatttctgatcctagaattcctgataatccaattatatttgcatctgatagttttctagaactgacggaatatacacgtgaggaaattctgggaagaaattgtcgttttcttcaaggtcctgaaacagatcaagcaacagtctcaaaaataagagatgccatcagagaacaacgggaaattactgtacagttaatcaactatactaagagtggaaagaagttttggaatttgttccacttgcaacccatgcgtgaccataagggtgaacttcaatatttcattggtgtccaattggatggtagtgatcatgtagaacctctgcgaaatcgcctgtcagagagagcagagctagaaagttctaaagtggtgaaagccactgcagaaaatgttaacgaggctgtccgagaacttcctgatgccaacttgagaccagaagatctgtgggcaattcattctcgtcctgtcttcccaagacctcacaaaaggggtagtgctagttggttagcaatacaagagattacttcacgtggtgaaaaaattgatctgcatcattttaagcccataaaacccttgggttgtggtgatactggcagtgtccatttggtggaactacgaggtacttctatactgtttgctatgaaggcaatggagaagtcaataatgttgaatcgtaacaaggttcaccgagcatgcgctgaacgggaaataatttcacaactggatcatccatttcttcctacgctatacacttcatttgagacttctacacacgtttgtttgataacagacttttgctcaggcggagagttatttgctttgcttgataagcagcctatgaaattcttcaaggaggactctgctaggttctatgctgcagaggttgtcattgccttggaatatcttcactgtctaggtataatttatcgcgaccttaagcctgaaaatattttactccagaaggatggacatattgtcttaacagactttgatttatcatttatggcctcctgtaaaccacagattataaggcatcaatcacctaagaagagaaggagatctagtagtcaaccgccaccaacatttgttgcagaaccagttaatcaatcaaattccttcgttggaaccgaagagtacattgctcctgaaattgttaccggtacaggccacagcagtgctattgattggtgggctcttggtattttgttgtatgagatgctatatggccgcacccctttcagggggaaaaacagacaaagaacattcaccaacattttgcagaaagatctgacctttccaagtagcattccggtgagccttgcagcacggcagttgatcaatgcgttgttgcaaagagaccctgccacacgtttaggatccactactggtgcaaacgaaatcaaacaacatccttttttccgtggaattacatggcctttgatccgttgcatgagccctccaccgttagatgtgcctcttcagcctattggttttgatccacaggccaaggatatatcgtgggaagacgacggggttcttgtaaattcaatggatatggatattttctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005794 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0007623 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0009657 GO:0009658 GO:0009719 GO:0009725 GO:0009735 GO:0009785 GO:0009881 GO:0009882 GO:0009898 GO:0009902 GO:0009903 GO:0009904 GO:0009986 GO:0009987 GO:0010033 GO:0010118 GO:0010119 GO:0010155 GO:0010181 GO:0010359 GO:0010360 GO:0010361 GO:0010362 GO:0012505 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019750 GO:0022898 GO:0023052 GO:0030522 GO:0032409 GO:0032410 GO:0032412 GO:0032413 GO:0032553 GO:0032879 GO:0034762 GO:0034763 GO:0034765 GO:0034766 GO:0035556 GO:0036094 GO:0036211 GO:0038023 GO:0042221 GO:0042802 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043271 GO:0043412 GO:0044070 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046777 GO:0048037 GO:0048511 GO:0048519 GO:0050662 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051051 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0051716 GO:0060089 GO:0065007 GO:0065009 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0071840 GO:0071944 GO:0097159 GO:0097367 GO:0098552 GO:0098562 GO:0104004 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1903792 GO:1903959 GO:1903960 GO:1904062
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAS_9 Pkinase

Protein Analysis

957

Amino Acids

106.75

Weight (kDa)

6.37

Isoelectric Point (pI)

43.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2333
Acc36I ACCTGC 1 cut(s) 751
AccB7I CCANNNNNTGG 1 cut(s) 1912
AccII CGCG 2 cut(s) 49, 2235
AciI CCGC 6 cut(s) 654, 1082, 1231, 2109, 2378, 2533
AclWI GGATC 7 cut(s) 106, 1310, 2037, 2676, 2689, 2740, 2795
AcoI YGGCCR 2 cut(s) 612, 2530
AcsI RAATTY 7 cut(s) 198, 1323, 1392, 1534, 2147, 2416, 2848
AcuI CTGAAG 4 cut(s) 168, 566, 1170, 2768
AcvI CACGTG 2 cut(s) 1385, 1835
AdeI CACNNNGTG 1 cut(s) 1838
AfaI GTAC 9 cut(s) 72, 109, 779, 891, 1012, 1494, 1927, 2441, 2467
AfiI CCNNNNNNNGG 8 cut(s) 312, 1081, 1120, 1121, 1912, 2544, 2545, 2546
AflII CTTAAG 1 cut(s) 2240
AflIII ACRYGT 3 cut(s) 1382, 2077, 2672
AgeI ACCGGT 1 cut(s) 2462
AhdI GACNNNNNGTC 1 cut(s) 2279
AjiI CACGTC 1 cut(s) 828
AjnI CCWGG 1 cut(s) 1074
AjuI GAANNNNNNNTTGG 4 cut(s) 428, 460, 1513, 1545
AleI CACNNNNGTG 1 cut(s) 2478
AluBI AGCT 6 cut(s) 20, 88, 146, 443, 648, 1657
AluI AGCT 6 cut(s) 20, 88, 146, 443, 648, 1657
Alw26I GTCTC 6 cut(s) 1019, 1143, 1453, 1729, 2060, 2655
AlwI GGATC 7 cut(s) 106, 1310, 2037, 2676, 2689, 2740, 2795
Ama87I CYCGRG 1 cut(s) 1059
AoxI GGCC 8 cut(s) 303, 612, 809, 2310, 2470, 2530, 2738, 2808
ApoI RAATTY 7 cut(s) 198, 1323, 1392, 1534, 2147, 2416, 2848
ArsI GACNNNNNNTTYG 2 cut(s) 806, 838
AsiGI ACCGGT 1 cut(s) 2462
Asp700I GAANNNNTTC 3 cut(s) 1538, 2150, 2208
AspLEI GCGC 3 cut(s) 49, 1110, 2003
AspS9I GGNCC 3 cut(s) 587, 1228, 1424
AsuNHI GCTAGC 1 cut(s) 929
AvaI CYCGRG 1 cut(s) 1059
AvaII GGWCC 3 cut(s) 587, 1228, 1424
AxyI CCTNAGG 1 cut(s) 1032
BalI TGGCCA 1 cut(s) 614
BamHI GGATCC 1 cut(s) 2681
BanII GRGCYC 2 cut(s) 2500, 2762
BbrPI CACGTG 2 cut(s) 1385, 1835
BbsI GAAGAC 3 cut(s) 443, 1765, 2835
BccI CCATC 8 cut(s) 118, 188, 320, 674, 749, 1475, 1598, 2264
BceAI ACGGC 1 cut(s) 2648
BciT130I CCWGG 1 cut(s) 1076
BclI TGATCA 3 cut(s) 400, 1612, 2640
BcoDI GTCTC 6 cut(s) 1019, 1143, 1453, 1729, 2060, 2655
BfmI CTRYAG 2 cut(s) 1686, 2181
BfrI CTTAAG 1 cut(s) 2240
BfuAI ACCTGC 1 cut(s) 751
BglII AGATCT 3 cut(s) 1744, 2363, 2590
BmcAI AGTACT 1 cut(s) 109
Bme1390I CCNGG 1 cut(s) 1076
Bme18I GGWCC 3 cut(s) 587, 1228, 1424
BmeRI GACNNNNNGTC 1 cut(s) 2279
BmeT110I CYCGRG 1 cut(s) 1059
BmgBI CACGTC 1 cut(s) 828
BmgT120I GGNCC 3 cut(s) 587, 1228, 1424
BmiI GGNNCC 5 cut(s) 588, 874, 1229, 2431, 2683
BmrFI CCNGG 1 cut(s) 1076
BmrI ACTGGG 1 cut(s) 648
BmtI GCTAGC 1 cut(s) 933
BmuI ACTGGG 1 cut(s) 648
BpiI GAAGAC 3 cut(s) 443, 1765, 2835
BpmI CTGGAG 1 cut(s) 2246
Bpu10I CCTNAGC 1 cut(s) 2104
BpuEI CTTGAG 1 cut(s) 1753
BsaAI YACGTR 2 cut(s) 1385, 1835
BsaBI GATNNNNATC 3 cut(s) 361, 1129, 1854
BsaI GGTCTC 2 cut(s) 1729, 2655
BsaJI CCNNGG 7 cut(s) 416, 1074, 1258, 1878, 2199, 2725, 2811
BsaWI WCCGGW 3 cut(s) 589, 2462, 2614
BsaXI ACNNNNNCTCC 4 cut(s) 252, 282, 2353, 2383
Bsc4I CCNNNNNNNGG 8 cut(s) 312, 1081, 1120, 1121, 1912, 2544, 2545, 2546
Bse118I RCCGGY 1 cut(s) 2462
Bse1I ACTGG 6 cut(s) 541, 643, 1900, 2031, 2402, 2695
Bse21I CCTNAGG 1 cut(s) 1032
Bse3DI GCAATG 6 cut(s) 64, 452, 940, 1959, 2193, 2442
Bse8I GATNNNNATC 3 cut(s) 361, 1129, 1854
BseBI CCWGG 1 cut(s) 1076
BseDI CCNNGG 7 cut(s) 416, 1074, 1258, 1878, 2199, 2725, 2811
BseJI GATNNNNATC 3 cut(s) 361, 1129, 1854
BseLI CCNNNNNNNGG 8 cut(s) 312, 1081, 1120, 1121, 1912, 2544, 2545, 2546
BseMI GCAATG 6 cut(s) 64, 452, 940, 1959, 2193, 2442
BseMII CTCAG 2 cut(s) 1046, 2118
BseNI ACTGG 6 cut(s) 541, 643, 1900, 2031, 2402, 2695
BseRI GAGGAG 1 cut(s) 1020
Bsh1236I CGCG 2 cut(s) 49, 2235
BshFI GGCC 8 cut(s) 305, 614, 811, 2312, 2472, 2532, 2740, 2810
BshTI ACCGGT 1 cut(s) 2462
BsiHKCI CYCGRG 1 cut(s) 1059
BsiSI CCGG 5 cut(s) 275, 590, 962, 2463, 2615
BslFI GGGAC 2 cut(s) 600, 1241
BslI CCNNNNNNNGG 8 cut(s) 312, 1081, 1120, 1121, 1912, 2544, 2545, 2546
BsmAI GTCTC 6 cut(s) 1019, 1143, 1453, 1729, 2060, 2655
BsmFI GGGAC 2 cut(s) 600, 1241
BsmI GAATGC 3 cut(s) 128, 762, 2610
BsnI GGCC 8 cut(s) 305, 614, 811, 2312, 2472, 2532, 2740, 2810
Bso31I GGTCTC 2 cut(s) 1729, 2655
BsoBI CYCGRG 1 cut(s) 1059
Bsp1286I GDGCHC 2 cut(s) 2500, 2762
Bsp1407I TGTACA 2 cut(s) 889, 1492
Bsp68I TCGCGA 1 cut(s) 2235
BspACI CCGC 6 cut(s) 654, 1082, 1231, 2109, 2378, 2533
BspANI GGCC 8 cut(s) 305, 614, 811, 2312, 2472, 2532, 2740, 2810
BspCNI CTCAG 2 cut(s) 1045, 2117
BspFNI CGCG 2 cut(s) 49, 2235
BspHI TCATGA 1 cut(s) 952
BspLI GGNNCC 5 cut(s) 588, 874, 1229, 2431, 2683
BspMAI CTGCAG 2 cut(s) 1690, 2185
BspMI ACCTGC 1 cut(s) 751
BspOI GCTAGC 1 cut(s) 933
BspPI GGATC 7 cut(s) 106, 1310, 2037, 2676, 2689, 2740, 2795
BspQI GCTCTTC 2 cut(s) 668, 951
BspTI CTTAAG 1 cut(s) 2240
BspTNI GGTCTC 2 cut(s) 1729, 2655
BsrDI GCAATG 6 cut(s) 64, 452, 940, 1959, 2193, 2442
BsrFI RCCGGY 1 cut(s) 2462
BsrGI TGTACA 2 cut(s) 889, 1492
BsrI ACTGG 6 cut(s) 541, 643, 1900, 2031, 2402, 2695
BssAI RCCGGY 1 cut(s) 2462
BssECI CCNNGG 7 cut(s) 416, 1074, 1258, 1878, 2199, 2725, 2811
BssT1I CCWWGG 5 cut(s) 416, 1258, 1878, 2199, 2811
Bst2UI CCWGG 1 cut(s) 1076
Bst4CI ACNGT 9 cut(s) 572, 709, 898, 1447, 1492, 1497, 1938, 2216, 2769
Bst6I CTCTTC 7 cut(s) 144, 550, 668, 951, 2348, 2430, 2787
BstAFI CTTAAG 1 cut(s) 2240
BstAPI GCANNNNNTGC 1 cut(s) 1555
BstAUI TGTACA 2 cut(s) 889, 1492
BstBAI YACGTR 2 cut(s) 1385, 1835
BstC8I GCNNGC 6 cut(s) 232, 514, 931, 1084, 1157, 1999
BstDEI CTNAG 4 cut(s) 1032, 1512, 2104, 2349
BstDSI CCRYGG 1 cut(s) 2725
BstFNI CGCG 2 cut(s) 49, 2235
BstHHI GCGC 3 cut(s) 49, 1110, 2003
BstMAI GTCTC 6 cut(s) 1019, 1143, 1453, 1729, 2060, 2655
BstMWI GCNNNNNNNGC 9 cut(s) 173, 176, 248, 336, 1152, 1555, 1949, 2134, 2785
BstNI CCWGG 1 cut(s) 1076
BstNSI RCATGY 2 cut(s) 922, 2001
BstSCI CCNGG 1 cut(s) 1074
BstSFI CTRYAG 2 cut(s) 1686, 2181
BstUI CGCG 2 cut(s) 49, 2235
BstV2I GAAGAC 3 cut(s) 443, 1765, 2835
BstX2I RGATCY 4 cut(s) 1744, 2363, 2590, 2681
BstXI CCANNNNNNTGG 2 cut(s) 1604, 2270
BstYI RGATCY 4 cut(s) 1744, 2363, 2590, 2681
Bsu36I CCTNAGG 1 cut(s) 1032
BsuRI GGCC 8 cut(s) 305, 614, 811, 2312, 2472, 2532, 2740, 2810
BtgI CCRYGG 1 cut(s) 2725
BtrI CACGTC 1 cut(s) 828
BtsI GCAGTG 5 cut(s) 162, 523, 1683, 1906, 2485
BtsIMutI CAGTG 6 cut(s) 162, 523, 1683, 1906, 2212, 2485
BtuMI TCGCGA 1 cut(s) 2235
BveI ACCTGC 1 cut(s) 751
Cac8I GCNNGC 6 cut(s) 232, 514, 931, 1084, 1157, 1999
CciI TCATGA 1 cut(s) 952
CfoI GCGC 3 cut(s) 49, 1110, 2003
Cfr10I RCCGGY 1 cut(s) 2462
Cfr13I GGNCC 3 cut(s) 587, 1228, 1424
CseI GACGC 1 cut(s) 854
Csp6I GTAC 9 cut(s) 71, 108, 778, 890, 1011, 1493, 1926, 2440, 2466
CspAI ACCGGT 1 cut(s) 2462
CviAII CATG 9 cut(s) 392, 919, 953, 970, 1555, 1616, 1998, 2736, 2755
CviQI GTAC 9 cut(s) 71, 108, 778, 890, 1011, 1493, 1926, 2440, 2466
DdeI CTNAG 4 cut(s) 1032, 1512, 2104, 2349
DraIII CACNNNGTG 1 cut(s) 1838
DriI GACNNNNNGTC 1 cut(s) 2279
EaeI YGGCCR 2 cut(s) 612, 2530
Eam1104I CTCTTC 7 cut(s) 144, 550, 668, 951, 2348, 2430, 2787
Eam1105I GACNNNNNGTC 1 cut(s) 2279
EarI CTCTTC 7 cut(s) 144, 550, 668, 951, 2348, 2430, 2787
EciI GGCGGA 1 cut(s) 2124
Eco130I CCWWGG 5 cut(s) 416, 1258, 1878, 2199, 2811
Eco24I GRGCYC 2 cut(s) 2500, 2762
Eco31I GGTCTC 2 cut(s) 1729, 2655
Eco47I GGWCC 3 cut(s) 587, 1228, 1424
Eco57I CTGAAG 4 cut(s) 168, 566, 1170, 2768
Eco72I CACGTG 2 cut(s) 1385, 1835
Eco81I CCTNAGG 1 cut(s) 1032
Eco88I CYCGRG 1 cut(s) 1059
EcoO109I RGGNCCY 1 cut(s) 1424
EcoRI GAATTC 1 cut(s) 1323
EcoRII CCWGG 1 cut(s) 1074
EcoT14I CCWWGG 5 cut(s) 416, 1258, 1878, 2199, 2811
EcoT38I GRGCYC 2 cut(s) 2500, 2762
ErhI CCWWGG 5 cut(s) 416, 1258, 1878, 2199, 2811
FaeI CATG 9 cut(s) 395, 922, 956, 973, 1558, 1619, 2001, 2739, 2758
FalI AAGNNNNNCTT 2 cut(s) 1143, 1175
FaqI GGGAC 2 cut(s) 600, 1241
FatI CATG 9 cut(s) 391, 918, 952, 969, 1554, 1615, 1997, 2735, 2754
FauI CCCGC 1 cut(s) 1075
FbaI TGATCA 3 cut(s) 400, 1612, 2640
FriOI GRGCYC 2 cut(s) 2500, 2762
GlaI GCGC 3 cut(s) 48, 1109, 2002
GsuI CTGGAG 1 cut(s) 2246
HaeIII GGCC 8 cut(s) 305, 614, 811, 2312, 2472, 2532, 2740, 2810
HapII CCGG 5 cut(s) 275, 590, 962, 2463, 2615
HgaI GACGC 1 cut(s) 854
HhaI GCGC 3 cut(s) 49, 1110, 2003
Hin1II CATG 9 cut(s) 395, 922, 956, 973, 1558, 1619, 2001, 2739, 2758
Hin6I GCGC 3 cut(s) 47, 1108, 2001
HinP1I GCGC 3 cut(s) 47, 1108, 2001
HincII GTYRAC 2 cut(s) 1699, 2375
HindII GTYRAC 2 cut(s) 1699, 2375
HinfI GANTC 9 cut(s) 152, 206, 281, 362, 383, 697, 1027, 1975, 2162
HpaI GTTAAC 1 cut(s) 1699
HpaII CCGG 5 cut(s) 275, 590, 962, 2463, 2615
Hpy166II GTNNAC 8 cut(s) 780, 825, 1013, 1574, 1699, 1990, 2321, 2375
Hpy188III TCNNGA 8 cut(s) 953, 1328, 1364, 1427, 1721, 2234, 2263, 2450
Hpy8I GTNNAC 8 cut(s) 780, 825, 1013, 1574, 1699, 1990, 2321, 2375
Hpy99I CGWCG 1 cut(s) 2837
HpyCH4III ACNGT 9 cut(s) 572, 709, 898, 1447, 1492, 1497, 1938, 2216, 2769
HpyCH4IV ACGT 7 cut(s) 189, 827, 910, 1384, 1834, 2079, 2674
HpyF10VI GCNNNNNNNGC 9 cut(s) 173, 176, 248, 336, 1152, 1555, 1949, 2134, 2785
HpyF3I CTNAG 4 cut(s) 1032, 1512, 2104, 2349
HpySE526I ACGT 7 cut(s) 189, 827, 910, 1384, 1834, 2079, 2674
Hsp92II CATG 9 cut(s) 395, 922, 956, 973, 1558, 1619, 2001, 2739, 2758
HspAI GCGC 3 cut(s) 47, 1108, 2001
Ksp22I TGATCA 3 cut(s) 400, 1612, 2640
KspAI GTTAAC 1 cut(s) 1699
LguI GCTCTTC 2 cut(s) 668, 951
LmnI GCTCC 2 cut(s) 878, 2452
MaeII ACGT 7 cut(s) 189, 827, 910, 1384, 1834, 2079, 2674
MaeIII GTNAC 7 cut(s) 185, 539, 709, 828, 1559, 1979, 2458
MfeI CAATTG 1 cut(s) 1598
MflI RGATCY 4 cut(s) 1744, 2363, 2590, 2681
MhlI GDGCHC 2 cut(s) 2500, 2762
MlsI TGGCCA 1 cut(s) 614
MluNI TGGCCA 1 cut(s) 614
MlyI GAGTC 5 cut(s) 161, 200, 392, 1021, 2156
MmeI TCCRAC 2 cut(s) 46, 2407
Mox20I TGGCCA 1 cut(s) 614
MroXI GAANNNNTTC 3 cut(s) 1538, 2150, 2208
MscI TGGCCA 1 cut(s) 614
MseI TTAA 9 cut(s) 117, 300, 978, 1499, 1698, 1863, 2241, 2285, 2406
MslI CAYNNNNRTG 4 cut(s) 118, 1569, 2478, 2615
Msp20I TGGCCA 1 cut(s) 614
MspA1I CMGCKG 2 cut(s) 20, 146
MspCI CTTAAG 1 cut(s) 2240
MspI CCGG 5 cut(s) 275, 590, 962, 2463, 2615
MspR9I CCNGG 1 cut(s) 1076
MunI CAATTG 1 cut(s) 1598
Mva1269I GAATGC 3 cut(s) 128, 762, 2610
MvaI CCWGG 1 cut(s) 1076
MvnI CGCG 2 cut(s) 49, 2235
MwoI GCNNNNNNNGC 9 cut(s) 173, 176, 248, 336, 1152, 1555, 1949, 2134, 2785
NheI GCTAGC 1 cut(s) 929
NlaIII CATG 9 cut(s) 395, 922, 956, 973, 1558, 1619, 2001, 2739, 2758
NlaIV GGNNCC 5 cut(s) 588, 874, 1229, 2431, 2683
NmuCI GTSAC 4 cut(s) 185, 709, 828, 1559
NruI TCGCGA 1 cut(s) 2235
NspI RCATGY 2 cut(s) 922, 2001
OliI CACNNNNGTG 1 cut(s) 2478
PaeI GCATGC 1 cut(s) 2001
PagI TCATGA 1 cut(s) 952
PciSI GCTCTTC 2 cut(s) 668, 951
PcsI WCGNNNNNNNCGW 2 cut(s) 227, 2430
PctI GAATGC 3 cut(s) 128, 762, 2610
PdmI GAANNNNTTC 3 cut(s) 1538, 2150, 2208
PfeI GAWTC 4 cut(s) 281, 362, 697, 1975
PflMI CCANNNNNTGG 1 cut(s) 1912
PinAI ACCGGT 1 cut(s) 2462
PleI GAGTC 5 cut(s) 160, 200, 391, 1021, 2156
PmaCI CACGTG 2 cut(s) 1385, 1835
PmlI CACGTG 2 cut(s) 1385, 1835
PpsI GAGTC 5 cut(s) 160, 200, 391, 1021, 2156
Ppu21I YACGTR 2 cut(s) 1385, 1835
PpuMI RGGWCCY 1 cut(s) 1424
PsiI TTATAA 1 cut(s) 2333
Psp5II RGGWCCY 1 cut(s) 1424
Psp6I CCWGG 1 cut(s) 1074
PspCI CACGTG 2 cut(s) 1385, 1835
PspGI CCWGG 1 cut(s) 1074
PspN4I GGNNCC 5 cut(s) 588, 874, 1229, 2431, 2683
PspPI GGNCC 3 cut(s) 587, 1228, 1424
PspPPI RGGWCCY 1 cut(s) 1424
PstI CTGCAG 2 cut(s) 1690, 2185
PsuI RGATCY 4 cut(s) 1744, 2363, 2590, 2681
PvuII CAGCTG 2 cut(s) 20, 146
RruI TCGCGA 1 cut(s) 2235
RsaI GTAC 9 cut(s) 72, 109, 779, 891, 1012, 1494, 1927, 2441, 2467
RsaNI GTAC 9 cut(s) 71, 108, 778, 890, 1011, 1493, 1926, 2440, 2466
RseI CAYNNNNRTG 4 cut(s) 118, 1569, 2478, 2615
SapI GCTCTTC 2 cut(s) 668, 951
SaqAI TTAA 9 cut(s) 117, 300, 978, 1499, 1698, 1863, 2241, 2285, 2406
Sau96I GGNCC 3 cut(s) 587, 1228, 1424
ScaI AGTACT 1 cut(s) 109
SchI GAGTC 5 cut(s) 161, 200, 392, 1021, 2156
ScrFI CCNGG 1 cut(s) 1076
SduI GDGCHC 2 cut(s) 2500, 2762
SfcI CTRYAG 2 cut(s) 1686, 2181
SinI GGWCC 3 cut(s) 587, 1228, 1424
SmiMI CAYNNNNRTG 4 cut(s) 118, 1569, 2478, 2615
SmlI CTYRAG 2 cut(s) 1732, 2240
SmoI CTYRAG 2 cut(s) 1732, 2240
SphI GCATGC 1 cut(s) 2001
SsiI CCGC 6 cut(s) 654, 1082, 1231, 2109, 2378, 2533
SspI AATATT 2 cut(s) 1583, 2254
StyD4I CCNGG 1 cut(s) 1074
StyI CCWWGG 5 cut(s) 416, 1258, 1878, 2199, 2811
TaaI ACNGT 9 cut(s) 572, 709, 898, 1447, 1492, 1497, 1938, 2216, 2769
TaiI ACGT 7 cut(s) 192, 830, 913, 1387, 1837, 2082, 2677
TaqI TCGA 2 cut(s) 132, 850
TatI WGTACW 7 cut(s) 70, 107, 777, 889, 1010, 1492, 2439
TauI GCSGC 1 cut(s) 2535
TfiI GAWTC 4 cut(s) 281, 362, 697, 1975
Tru1I TTAA 9 cut(s) 117, 300, 978, 1499, 1698, 1863, 2241, 2285, 2406
Tru9I TTAA 9 cut(s) 117, 300, 978, 1499, 1698, 1863, 2241, 2285, 2406
TscAI CASTG 6 cut(s) 169, 523, 1690, 1906, 2219, 2485
TseFI GTSAC 4 cut(s) 185, 709, 828, 1559
Tsp45I GTSAC 4 cut(s) 185, 709, 828, 1559
TspDTI ATGAA 9 cut(s) 102, 621, 969, 986, 1576, 1748, 1961, 2049, 2159
TspGWI ACGGA 5 cut(s) 236, 827, 1388, 2714, 2738
TspRI CASTG 6 cut(s) 169, 523, 1690, 1906, 2219, 2485
Van91I CCANNNNNTGG 1 cut(s) 1912
Vha464I CTTAAG 1 cut(s) 2240
VpaK11BI GGWCC 3 cut(s) 587, 1228, 1424
XapI RAATTY 7 cut(s) 198, 1323, 1392, 1534, 2147, 2416, 2848
XbaI TCTAGA 1 cut(s) 1363
XceI RCATGY 2 cut(s) 922, 2001
XcmI CCANNNNNNNNNTGG 2 cut(s) 1746, 1876
XmnI GAANNNNTTC 3 cut(s) 1538, 2150, 2208
ZrmI AGTACT 1 cut(s) 109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.