pycom10g12490

Phototropin-2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0004987
Physical Location & Seq
Reverse (-)
15955923 .. 15966463
10541 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g12490.2

Sequence Viewer

Length: 2850 bp
ATGCTCAGTGAAAGCTTTCTATCTGGGATATCAAACTCGAATTTTCAGCAGGTGGTGGATTTTCTGTTTTCAATGGAGGTCTTCAACCTGAAAGATGTTGGAGCAAACCCTAGCAACAAGCAAGCTGCTGATACTGTGGAAATTGGACCAGGAAGCAGTTCTTCAACAAAAACTTCCGCTCCTGCTGCTAAAAGGAATTCCATCACCAAGTGGATGGCATTCGAAACTGCTCAAGCTTCAGCCGATCTGAAAAGCACTTCTGCCACTGATTTAAATGGAGGGCATGCTTCCAATTCTGGCAACAACCAGATTATCACAGAGAAGGCAACCGTAGCAGCAAGAACAGCTGAGTGGGGGGTTGTGGTGAAGTCATCAGATATTGGGGAACGAAGCTTTAAGGGCATATCTGGAAGAAAAAACTCATCAGAGAGATTTGAGTCATCTGCAAGGAATTCTGAGGACTCGAATTATGGGGGTGAGATGGGAAATATTCCAAGGGTTTCTAATGAGTTGATGGCAGCTCTGTCTACACCTCAGCAGACTTTTGTTGTTTCTGATGCCACTAAGCCTGATTGCCCAATTGTGTATGCTAGTAGTGGCTTCTTTGGGATGACTGGGTATTCTTCAAAGGAGGTCATTGGCAGGAACTGCCGATTTCTTCAGGGACCGGAAACCGATCGGGATGAAGTGTTGAAAATCCGAGACGCAGTGAAGACCGGGAAAAGTTACTGCGGTAGGCTCTTCAACTACAAGAAAGATGGAACTCCCTTCTGGAATCTTCTCACCATTGCCCCAATCAAAGATGAGCAAGGAAACACCATCAAATTTATTGGAATGCAGGTTGAGGTCAACAAGTACACAGAAGGGGTGAATGACAAGGCATTGAGGGCGAATGGATTGCCCAAGTCACTAATCCGCTCTGATGCTCGTCAGAAGGAAAGCGAATTAGGCTCCATCATTGAAGTTGTCCAAACAGCTAAACATCCACGTTCTCACATCCGGGTTGCGAGTCATGACACTGTCAGCATTCATGAGGAGCAGGACAGCCTCAACCTTGATTATGTTCTGCCTAAATCCGCTGCAACTGCAAATATGATTACGCCTGGTACACAACCTCCTCAATCGGATGTGAAAGGCGATAAGTTTCACAGCATGAGCTCTCCTATTGATGCGGGCAAAATATCTCGAAAGTCAGGACGTGCTTCCTCTATGGGATTTATAACAAGGTCTCCAAGCTCTGCAAGCAGGCATGAAAAAGAACCTGTTATTGAACCGGAAGTTTTGATGACCATAGATATAGAGCCCTCTGACAATTGGGACCGTGCTGAAAGAGAAAGGGATATATGCCAAGGATTTGACATGAAAACCACATTGGAACGCATTGAAAAGAACTTTGTGATTAGTGACCCTAGAATTCCTGATTGCCCCATTATATTTGCATCTGATAGCTTCTTAGAACTGACAGAATATACCCGTGAAGAAATTTTGGGAAGAAAATGTTGTTTTCTCCAGAGACCTGAAACAGAACAAACAAGAGAACAAAGGGAAGTTACTGTCCAGTTGATCAACCATACCAAGAGTGGAAAAAAGTTTTTGAATTTATTTCATTTGCAGCCCATGCGTGACCAGAAGGGTGAACTTCAATATTTCATTGGTGTCCAACTGGATGAGAGTGGTCATGTGGAACCTCTGGGAAATCGCCTATCAGAGAGCACAGAGATAGAAAGTGCTAAATTGGTCAAAGCTACCGCACACAATGTTGATGAGGCTGTCCGAGAACTTCCTGATGCCAACTTGAAACCAGAAGAGTTATGGGCAATTCATTCTCAACCTGTCTGGCCAAGGCCTCACAAAAGGGAGAGTCCTTCTTGGACAGCAATACGGGAGATTACTGCTCGTGGTGAAAAAATTGGTCTACGTCATTTTAAGCCTGTAAAACCATTGGGATGTGGTAATACTGGAAGTGTACATTTGGTGGAACTAAAAGGTACAGGTGAACTGTACGCTATGAAGGCAATGGAGAAGTCAAGAATGTTAAACCGCAACAAGGTTCACCGAGCATGCATTGAGAGGGAGATAATTTCACTACTCGACCATCCTTTTCTCCCCACACTATACACTTCATTTGAGACCTCCACACACGTTTGTTTGATATCAGACTTTTTCAGTGGTGGAGAGTTATTTGCTTTGCTTGACCAGCAGCCAATGAAATTATTTAAGGAGGAATCTGCGAGGTTTTATGCAGCAGAGGTGGTTATCGCCTTGGAATATCTTCACTGTCTAGGAATAGTATATCGCGACCTTAAGCCTGAAAATATTTTACTCCAGAAGGATGGGCATATTGTTTTAACAGATTTTGATTTATCATTTATGACATCGTGTAAACCCCTGATTATAAGGCATCAATCGCTTAACAATAGAAGACGGTCGAGCAGTCAACCACCACCAACATTTATTGCAGAACCAGTCTCACAATCAAATTCATTTGTCGGAACTGAAGAGTACATTGCTCCTGAAATTGTTACTGGTGCAGGCCACAGCAGTGCTATTGATTGGTGGGCTCTTGGTATTTTGTTGTATGAGATGCTGTATGGCCGTACACCTTTCAGGGGTAAAAATAGGCAGAGGACATTCACCAACATCCTGCATAAAGATCTCACGTTTCCAGGCAGTGTTCCGGTAAGCCTTGCAGCACGGCAGTTGATCAATGCATTGTTGCAAAGAGACCCGGACACACGTTTAGGATCCAATACTGGGGCAAATGAAATCAAGCAACATCCTTTCTTCCGTGGATTTAATTGGCCCTTGATTCGTTGCATGAGCCCTCCGACATTCTCTTCAACCCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005794 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0007623 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0009657 GO:0009658 GO:0009719 GO:0009725 GO:0009735 GO:0009785 GO:0009881 GO:0009882 GO:0009898 GO:0009902 GO:0009903 GO:0009904 GO:0009986 GO:0009987 GO:0010033 GO:0010118 GO:0010119 GO:0010155 GO:0010181 GO:0010359 GO:0010360 GO:0010361 GO:0010362 GO:0012505 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019750 GO:0022898 GO:0023052 GO:0030522 GO:0032409 GO:0032410 GO:0032412 GO:0032413 GO:0032553 GO:0032879 GO:0034762 GO:0034763 GO:0034765 GO:0034766 GO:0035556 GO:0036094 GO:0036211 GO:0038023 GO:0042221 GO:0042802 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043271 GO:0043412 GO:0044070 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046777 GO:0048037 GO:0048511 GO:0048519 GO:0050662 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051051 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0051716 GO:0060089 GO:0065007 GO:0065009 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0071840 GO:0071944 GO:0097159 GO:0097367 GO:0098552 GO:0098562 GO:0104004 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1903792 GO:1903959 GO:1903960 GO:1904062
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAS_9 Pkinase

Protein Analysis

950

Amino Acids

105.8

Weight (kDa)

6.96

Isoelectric Point (pI)

45.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1220, 2396
AarI CACCTGC 1 cut(s) 40
Acc36I ACCTGC 2 cut(s) 40, 829
AccBSI CCGCTC 2 cut(s) 179, 918
AccI GTMKAC 2 cut(s) 527, 1915
AccII CGCG 1 cut(s) 2298
AciI CCGC 7 cut(s) 177, 732, 916, 1077, 1172, 1749, 2041
AclWI GGATC 2 cut(s) 2739, 2752
AcoI YGGCCR 2 cut(s) 1838, 2593
AcsI RAATTY 8 cut(s) 40, 196, 451, 824, 1413, 1482, 1597, 2479
AcuI CTGAAG 3 cut(s) 222, 644, 2517
AdeI CACNNNGTG 1 cut(s) 210
AfaI GTAC 7 cut(s) 857, 1108, 1968, 1990, 2003, 2504, 2599
AfiI CCNNNNNNNGG 3 cut(s) 2047, 2609, 2754
AflII CTTAAG 1 cut(s) 2303
AflIII ACRYGT 2 cut(s) 2140, 2735
AjiI CACGTC 1 cut(s) 1199
AjnI CCWGG 3 cut(s) 148, 1102, 2665
AjuI GAANNNNNNNTTGG 2 cut(s) 1355, 1387
AleI CACNNNNGTG 1 cut(s) 2541
Alw21I GWGCWC 2 cut(s) 1160, 1715
Alw26I GTCTC 6 cut(s) 696, 1233, 1507, 2123, 2473, 2718
AlwI GGATC 2 cut(s) 2739, 2752
AlwNI CAGNNNCTG 1 cut(s) 648
AoxI GGCC 5 cut(s) 1838, 1844, 2533, 2593, 2801
ApeKI GCWGC 9 cut(s) 125, 185, 335, 518, 1079, 1612, 2200, 2243, 2690
ApoI RAATTY 8 cut(s) 40, 196, 451, 824, 1413, 1482, 1597, 2479
Asp700I GAANNNNTTC 3 cut(s) 15, 157, 2271
AspS9I GGNCC 4 cut(s) 146, 665, 1318, 2802
AsuC2I CCSGG 3 cut(s) 718, 1001, 2729
AsuII TTCGAA 1 cut(s) 222
AvaII GGWCC 3 cut(s) 146, 665, 1318
BalI TGGCCA 1 cut(s) 1840
BamHI GGATCC 1 cut(s) 2744
BanII GRGCYC 4 cut(s) 1160, 1305, 2563, 2825
BauI CACGAG 1 cut(s) 1896
BbsI GAAGAC 3 cut(s) 73, 719, 2428
Bbv12I GWGCWC 2 cut(s) 1160, 1715
BbvCI CCTCAGC 1 cut(s) 534
BbvI GCAGC 9 cut(s) 112, 172, 347, 530, 1066, 1624, 2212, 2255, 2702
BccI CCATC 9 cut(s) 208, 209, 475, 508, 752, 827, 962, 2103, 2327
BceAI ACGGC 2 cut(s) 2580, 2711
BcgI CGANNNNNNTGC 2 cut(s) 880, 914
BciT130I CCWGG 3 cut(s) 150, 1104, 2667
BclI TGATCA 2 cut(s) 1563, 2703
BcnI CCSGG 3 cut(s) 718, 1001, 2729
BcoDI GTCTC 6 cut(s) 696, 1233, 1507, 2123, 2473, 2718
BfaI CTAG 4 cut(s) 111, 591, 1410, 2282
BfrI CTTAAG 1 cut(s) 2303
BfuAI ACCTGC 2 cut(s) 40, 829
BglII AGATCT 1 cut(s) 2653
BisI GCNGC 9 cut(s) 126, 186, 336, 519, 1080, 1613, 2201, 2244, 2691
BlsI GCNGC 9 cut(s) 127, 187, 337, 520, 1081, 1614, 2202, 2245, 2692
Bme1390I CCNGG 6 cut(s) 150, 718, 1001, 1104, 2667, 2729
Bme18I GGWCC 3 cut(s) 146, 665, 1318
BmgBI CACGTC 1 cut(s) 1199
BmgT120I GGNCC 4 cut(s) 146, 665, 1318, 2802
BmiI GGNNCC 5 cut(s) 666, 952, 1319, 1686, 2746
BmrFI CCNGG 6 cut(s) 150, 718, 1001, 1104, 2667, 2729
BmrI ACTGGG 2 cut(s) 624, 2763
BmsI GCATC 7 cut(s) 547, 913, 1159, 1448, 1777, 2410, 2574
BmuI ACTGGG 2 cut(s) 624, 2763
BpiI GAAGAC 3 cut(s) 73, 719, 2428
BpmI CTGGAG 2 cut(s) 1493, 2309
Bpu10I CCTNAGC 1 cut(s) 534
Bpu14I TTCGAA 1 cut(s) 222
BpuEI CTTGAG 1 cut(s) 216
BpuMI CCSGG 3 cut(s) 718, 1001, 2729
BsaI GGTCTC 4 cut(s) 1233, 1507, 2123, 2718
BsaJI CCNNGG 5 cut(s) 494, 1348, 1841, 2262, 2788
BsaWI WCCGGW 3 cut(s) 667, 1273, 2677
BsaXI ACNNNNNCTCC 6 cut(s) 163, 193, 1099, 1129, 1213, 1243
Bsc4I CCNNNNNNNGG 3 cut(s) 2047, 2609, 2754
Bse1I ACTGG 7 cut(s) 619, 1558, 1668, 1963, 2465, 2530, 2758
Bse3DI GCAATG 3 cut(s) 786, 2022, 2505
BseBI CCWGG 3 cut(s) 150, 1104, 2667
BseDI CCNNGG 5 cut(s) 494, 1348, 1841, 2262, 2788
BseLI CCNNNNNNNGG 3 cut(s) 2047, 2609, 2754
BseMI GCAATG 3 cut(s) 786, 2022, 2505
BseMII CTCAG 4 cut(s) 19, 339, 447, 548
BseNI ACTGG 7 cut(s) 619, 1558, 1668, 1963, 2465, 2530, 2758
BseRI GAGGAG 2 cut(s) 1049, 1107
BseXI GCAGC 9 cut(s) 112, 172, 347, 530, 1066, 1624, 2212, 2255, 2702
BsgI GTGCAG 1 cut(s) 2550
Bsh1236I CGCG 1 cut(s) 2298
Bsh1285I CGRYCG 2 cut(s) 679, 2429
BshFI GGCC 5 cut(s) 1840, 1846, 2535, 2595, 2803
BsiEI CGRYCG 2 cut(s) 679, 2429
BsiHKAI GWGCWC 2 cut(s) 1160, 1715
BsiSI CCGG 6 cut(s) 668, 717, 1000, 1274, 2678, 2729
BslFI GGGAC 2 cut(s) 678, 1331
BslI CCNNNNNNNGG 3 cut(s) 2047, 2609, 2754
BsmAI GTCTC 6 cut(s) 696, 1233, 1507, 2123, 2473, 2718
BsmBI CGTCTC 1 cut(s) 696
BsmFI GGGAC 2 cut(s) 678, 1331
BsmI GAATGC 3 cut(s) 218, 840, 1026
BsnI GGCC 5 cut(s) 1840, 1846, 2535, 2595, 2803
Bso31I GGTCTC 4 cut(s) 1233, 1507, 2123, 2718
Bsp119I TTCGAA 1 cut(s) 222
Bsp1286I GDGCHC 5 cut(s) 1160, 1305, 1715, 2563, 2825
Bsp1407I TGTACA 1 cut(s) 1966
Bsp143I GATC 6 cut(s) 244, 676, 1563, 2653, 2703, 2744
Bsp68I TCGCGA 1 cut(s) 2298
BspACI CCGC 7 cut(s) 177, 732, 916, 1077, 1172, 1749, 2041
BspANI GGCC 5 cut(s) 1840, 1846, 2535, 2595, 2803
BspCNI CTCAG 4 cut(s) 18, 340, 448, 547
BspFNI CGCG 1 cut(s) 2298
BspHI TCATGA 2 cut(s) 1012, 1030
BspLI GGNNCC 5 cut(s) 666, 952, 1319, 1686, 2746
BspMI ACCTGC 2 cut(s) 40, 829
BspPI GGATC 2 cut(s) 2739, 2752
BspQI GCTCTTC 1 cut(s) 746
BspT104I TTCGAA 1 cut(s) 222
BspTI CTTAAG 1 cut(s) 2303
BspTNI GGTCTC 4 cut(s) 1233, 1507, 2123, 2718
BsrBI CCGCTC 2 cut(s) 179, 918
BsrDI GCAATG 3 cut(s) 786, 2022, 2505
BsrGI TGTACA 1 cut(s) 1966
BsrI ACTGG 7 cut(s) 619, 1558, 1668, 1963, 2465, 2530, 2758
BssECI CCNNGG 5 cut(s) 494, 1348, 1841, 2262, 2788
BssMI GATC 6 cut(s) 244, 676, 1563, 2653, 2703, 2744
BssSI CACGAG 1 cut(s) 1896
BssT1I CCWWGG 4 cut(s) 494, 1348, 1841, 2262
Bst2BI CACGAG 1 cut(s) 1896
Bst2UI CCWGG 3 cut(s) 150, 1104, 2667
Bst4CI ACNGT 8 cut(s) 136, 331, 1021, 1322, 1555, 2001, 2279, 2427
Bst6I CTCTTC 4 cut(s) 746, 1800, 2493, 2842
BstAFI CTTAAG 1 cut(s) 2303
BstAPI GCANNNNNTGC 2 cut(s) 648, 1618
BstAUI TGTACA 1 cut(s) 1966
BstBI TTCGAA 1 cut(s) 222
BstC8I GCNNGC 7 cut(s) 123, 285, 1174, 1243, 1247, 2062, 2533
BstDEI CTNAG 6 cut(s) 5, 348, 456, 534, 564, 1453
BstDSI CCRYGG 1 cut(s) 2788
BstFNI CGCG 1 cut(s) 2298
BstKTI GATC 6 cut(s) 247, 679, 1566, 2656, 2706, 2747
BstMAI GTCTC 6 cut(s) 696, 1233, 1507, 2123, 2473, 2718
BstMBI GATC 6 cut(s) 244, 676, 1563, 2653, 2703, 2744
BstMCI CGRYCG 2 cut(s) 679, 2429
BstNI CCWGG 3 cut(s) 150, 1104, 2667
BstNSI RCATGY 2 cut(s) 287, 2064
BstSCI CCNGG 6 cut(s) 148, 716, 999, 1102, 2665, 2727
BstUI CGCG 1 cut(s) 2298
BstV1I GCAGC 9 cut(s) 112, 172, 347, 530, 1066, 1624, 2212, 2255, 2702
BstV2I GAAGAC 3 cut(s) 73, 719, 2428
BstX2I RGATCY 2 cut(s) 2653, 2744
BstXI CCANNNNNNTGG 2 cut(s) 214, 2333
BstYI RGATCY 2 cut(s) 2653, 2744
BsuRI GGCC 5 cut(s) 1840, 1846, 2535, 2595, 2803
BtgI CCRYGG 1 cut(s) 2788
BtrI CACGTC 1 cut(s) 1199
BtsI GCAGTG 3 cut(s) 714, 2548, 2677
BtsIMutI CAGTG 8 cut(s) 13, 264, 714, 1017, 2173, 2275, 2548, 2677
BtuMI TCGCGA 1 cut(s) 2298
BveI ACCTGC 2 cut(s) 40, 829
Cac8I GCNNGC 7 cut(s) 123, 285, 1174, 1243, 1247, 2062, 2533
CaiI CAGNNNCTG 1 cut(s) 648
CciI TCATGA 2 cut(s) 1012, 1030
Cfr13I GGNCC 4 cut(s) 146, 665, 1318, 2802
CseI GACGC 1 cut(s) 713
Csp6I GTAC 7 cut(s) 856, 1107, 1967, 1989, 2002, 2503, 2598
CviQI GTAC 7 cut(s) 856, 1107, 1967, 1989, 2002, 2503, 2598
DdeI CTNAG 6 cut(s) 5, 348, 456, 534, 564, 1453
DpnI GATC 6 cut(s) 246, 678, 1565, 2655, 2705, 2746
DpnII GATC 6 cut(s) 244, 676, 1563, 2653, 2703, 2744
DraI TTTAAA 1 cut(s) 273
DraIII CACNNNGTG 1 cut(s) 210
EaeI YGGCCR 2 cut(s) 1838, 2593
Eam1104I CTCTTC 4 cut(s) 746, 1800, 2493, 2842
EarI CTCTTC 4 cut(s) 746, 1800, 2493, 2842
Ecl136II GAGCTC 1 cut(s) 1158
Eco130I CCWWGG 4 cut(s) 494, 1348, 1841, 2262
Eco147I AGGCCT 1 cut(s) 1846
Eco24I GRGCYC 4 cut(s) 1160, 1305, 2563, 2825
Eco31I GGTCTC 4 cut(s) 1233, 1507, 2123, 2718
Eco32I GATATC 2 cut(s) 30, 2154
Eco47I GGWCC 3 cut(s) 146, 665, 1318
Eco53kI GAGCTC 1 cut(s) 1158
Eco57I CTGAAG 3 cut(s) 222, 644, 2517
EcoICRI GAGCTC 1 cut(s) 1158
EcoRI GAATTC 3 cut(s) 196, 451, 1413
EcoRII CCWGG 3 cut(s) 148, 1102, 2665
EcoRV GATATC 2 cut(s) 30, 2154
EcoT14I CCWWGG 4 cut(s) 494, 1348, 1841, 2262
EcoT22I ATGCAT 2 cut(s) 2066, 2713
EcoT38I GRGCYC 4 cut(s) 1160, 1305, 2563, 2825
ErhI CCWWGG 4 cut(s) 494, 1348, 1841, 2262
Esp3I CGTCTC 1 cut(s) 696
FalI AAGNNNNNCTT 2 cut(s) 145, 177
FaqI GGGAC 2 cut(s) 678, 1331
FauI CCCGC 1 cut(s) 1165
FbaI TGATCA 2 cut(s) 1563, 2703
FblI GTMKAC 2 cut(s) 527, 1915
Fnu4HI GCNGC 9 cut(s) 126, 186, 336, 519, 1080, 1613, 2201, 2244, 2691
FriOI GRGCYC 4 cut(s) 1160, 1305, 2563, 2825
Fsp4HI GCNGC 9 cut(s) 126, 186, 336, 519, 1080, 1613, 2201, 2244, 2691
FspBI CTAG 4 cut(s) 111, 591, 1410, 2282
GluI GCNGC 9 cut(s) 126, 186, 336, 519, 1080, 1613, 2201, 2244, 2691
GsuI CTGGAG 2 cut(s) 1493, 2309
HaeIII GGCC 5 cut(s) 1840, 1846, 2535, 2595, 2803
HapII CCGG 6 cut(s) 668, 717, 1000, 1274, 2678, 2729
HgaI GACGC 1 cut(s) 713
HincII GTYRAC 2 cut(s) 850, 2438
HindII GTYRAC 2 cut(s) 850, 2438
HindIII AAGCTT 3 cut(s) 13, 234, 391
HinfI GANTC 7 cut(s) 437, 461, 775, 1009, 1861, 2225, 2809
HpaII CCGG 6 cut(s) 668, 717, 1000, 1274, 2678, 2729
HpyAV CCTTC 8 cut(s) 316, 778, 857, 928, 1624, 1875, 2005, 2323
HpyCH4III ACNGT 8 cut(s) 136, 331, 1021, 1322, 1555, 2001, 2279, 2427
HpyCH4IV ACGT 6 cut(s) 988, 1198, 1918, 2142, 2660, 2737
HpyF3I CTNAG 6 cut(s) 5, 348, 456, 534, 564, 1453
HpySE526I ACGT 6 cut(s) 988, 1198, 1918, 2142, 2660, 2737
Ksp22I TGATCA 2 cut(s) 1563, 2703
Kzo9I GATC 6 cut(s) 244, 676, 1563, 2653, 2703, 2744
LguI GCTCTTC 1 cut(s) 746
LmnI GCTCC 5 cut(s) 101, 184, 956, 1036, 2515
Lsp1109I GCAGC 9 cut(s) 112, 172, 347, 530, 1066, 1624, 2212, 2255, 2702
LweI GCATC 7 cut(s) 547, 913, 1159, 1448, 1777, 2410, 2574
MaeI CTAG 4 cut(s) 111, 591, 1410, 2282
MaeII ACGT 6 cut(s) 988, 1198, 1918, 2142, 2660, 2737
MaeIII GTNAC 6 cut(s) 725, 906, 1403, 1549, 1622, 2521
MalI GATC 6 cut(s) 246, 678, 1565, 2655, 2705, 2746
MbiI CCGCTC 2 cut(s) 179, 918
MboI GATC 6 cut(s) 244, 676, 1563, 2653, 2703, 2744
MfeI CAATTG 2 cut(s) 579, 1312
MflI RGATCY 2 cut(s) 2653, 2744
MhlI GDGCHC 5 cut(s) 1160, 1305, 1715, 2563, 2825
MlsI TGGCCA 1 cut(s) 1840
MluNI TGGCCA 1 cut(s) 1840
MlyI GAGTC 4 cut(s) 446, 455, 1018, 1870
MmeI TCCRAC 3 cut(s) 79, 1684, 2470
Mox20I TGGCCA 1 cut(s) 1840
Mph1103I ATGCAT 2 cut(s) 2066, 2713
MroXI GAANNNNTTC 3 cut(s) 15, 157, 2271
MscI TGGCCA 1 cut(s) 1840
MseI TTAA 9 cut(s) 272, 396, 1926, 2036, 2217, 2304, 2348, 2412, 2796
MslI CAYNNNNRTG 2 cut(s) 1945, 2541
Msp20I TGGCCA 1 cut(s) 1840
MspA1I CMGCKG 2 cut(s) 347, 1079
MspCI CTTAAG 1 cut(s) 2303
MspI CCGG 6 cut(s) 668, 717, 1000, 1274, 2678, 2729
MspR9I CCNGG 6 cut(s) 150, 718, 1001, 1104, 2667, 2729
MunI CAATTG 2 cut(s) 579, 1312
Mva1269I GAATGC 3 cut(s) 218, 840, 1026
MvaI CCWGG 3 cut(s) 150, 1104, 2667
MvnI CGCG 1 cut(s) 2298
NciI CCSGG 3 cut(s) 718, 1001, 2729
NdeII GATC 6 cut(s) 244, 676, 1563, 2653, 2703, 2744
NlaIV GGNNCC 5 cut(s) 666, 952, 1319, 1686, 2746
NmuCI GTSAC 3 cut(s) 906, 1403, 1622
NruI TCGCGA 1 cut(s) 2298
NsiI ATGCAT 2 cut(s) 2066, 2713
NspI RCATGY 2 cut(s) 287, 2064
NspV TTCGAA 1 cut(s) 222
OliI CACNNNNGTG 1 cut(s) 2541
PaeI GCATGC 2 cut(s) 287, 2064
PagI TCATGA 2 cut(s) 1012, 1030
PaqCI CACCTGC 1 cut(s) 40
PceI AGGCCT 1 cut(s) 1846
PciSI GCTCTTC 1 cut(s) 746
PctI GAATGC 3 cut(s) 218, 840, 1026
PdmI GAANNNNTTC 3 cut(s) 15, 157, 2271
PfeI GAWTC 3 cut(s) 775, 2225, 2809
PflFI GACNNNGTC 1 cut(s) 1019
PkrI GCNGC 9 cut(s) 127, 187, 337, 520, 1081, 1614, 2202, 2245, 2692
Ple19I CGATCG 1 cut(s) 679
PleI GAGTC 4 cut(s) 445, 455, 1017, 1869
PpsI GAGTC 4 cut(s) 445, 455, 1017, 1869
PsiI TTATAA 2 cut(s) 1220, 2396
Psp124BI GAGCTC 1 cut(s) 1160
Psp6I CCWGG 3 cut(s) 148, 1102, 2665
PspGI CCWGG 3 cut(s) 148, 1102, 2665
PspN4I GGNNCC 5 cut(s) 666, 952, 1319, 1686, 2746
PspPI GGNCC 4 cut(s) 146, 665, 1318, 2802
PstNI CAGNNNCTG 1 cut(s) 648
PsuI RGATCY 2 cut(s) 2653, 2744
PsyI GACNNNGTC 1 cut(s) 1019
PvuI CGATCG 1 cut(s) 679
PvuII CAGCTG 1 cut(s) 347
RruI TCGCGA 1 cut(s) 2298
RsaI GTAC 7 cut(s) 857, 1108, 1968, 1990, 2003, 2504, 2599
RsaNI GTAC 7 cut(s) 856, 1107, 1967, 1989, 2002, 2503, 2598
RseI CAYNNNNRTG 2 cut(s) 1945, 2541
SacI GAGCTC 1 cut(s) 1160
SapI GCTCTTC 1 cut(s) 746
SaqAI TTAA 9 cut(s) 272, 396, 1926, 2036, 2217, 2304, 2348, 2412, 2796
SatI GCNGC 9 cut(s) 126, 186, 336, 519, 1080, 1613, 2201, 2244, 2691
Sau3AI GATC 6 cut(s) 244, 676, 1563, 2653, 2703, 2744
Sau96I GGNCC 4 cut(s) 146, 665, 1318, 2802
SchI GAGTC 4 cut(s) 446, 455, 1018, 1870
ScrFI CCNGG 6 cut(s) 150, 718, 1001, 1104, 2667, 2729
SduI GDGCHC 5 cut(s) 1160, 1305, 1715, 2563, 2825
SfaNI GCATC 7 cut(s) 547, 913, 1159, 1448, 1777, 2410, 2574
SfuI TTCGAA 1 cut(s) 222
SinI GGWCC 3 cut(s) 146, 665, 1318
SmiI ATTTAAAT 1 cut(s) 273
SmiMI CAYNNNNRTG 2 cut(s) 1945, 2541
SmlI CTYRAG 2 cut(s) 231, 2303
SmoI CTYRAG 2 cut(s) 231, 2303
SphI GCATGC 2 cut(s) 287, 2064
SseBI AGGCCT 1 cut(s) 1846
SsiI CCGC 7 cut(s) 177, 732, 916, 1077, 1172, 1749, 2041
SspI AATATT 3 cut(s) 490, 1646, 2317
SspMI CTAG 4 cut(s) 111, 591, 1410, 2282
SstI GAGCTC 1 cut(s) 1160
StuI AGGCCT 1 cut(s) 1846
StyD4I CCNGG 6 cut(s) 148, 716, 999, 1102, 2665, 2727
StyI CCWWGG 4 cut(s) 494, 1348, 1841, 2262
SwaI ATTTAAAT 1 cut(s) 273
TaaI ACNGT 8 cut(s) 136, 331, 1021, 1322, 1555, 2001, 2279, 2427
TaiI ACGT 6 cut(s) 991, 1201, 1921, 2145, 2663, 2740
TaqI TCGA 6 cut(s) 38, 222, 464, 1186, 2091, 2429
TatI WGTACW 3 cut(s) 855, 1966, 2502
TfiI GAWTC 3 cut(s) 775, 2225, 2809
Tru1I TTAA 9 cut(s) 272, 396, 1926, 2036, 2217, 2304, 2348, 2412, 2796
Tru9I TTAA 9 cut(s) 272, 396, 1926, 2036, 2217, 2304, 2348, 2412, 2796
TscAI CASTG 8 cut(s) 13, 271, 714, 1024, 2173, 2282, 2548, 2677
TseFI GTSAC 3 cut(s) 906, 1403, 1622
TseI GCWGC 9 cut(s) 125, 185, 335, 518, 1079, 1612, 2200, 2243, 2690
Tsp45I GTSAC 3 cut(s) 906, 1403, 1622
TspGWI ACGGA 1 cut(s) 2777
TspRI CASTG 8 cut(s) 13, 271, 714, 1024, 2173, 2282, 2548, 2677
Tth111I GACNNNGTC 1 cut(s) 1019
Vha464I CTTAAG 1 cut(s) 2303
VpaK11BI GGWCC 3 cut(s) 146, 665, 1318
XapI RAATTY 8 cut(s) 40, 196, 451, 824, 1413, 1482, 1597, 2479
XceI RCATGY 2 cut(s) 287, 2064
XcmI CCANNNNNNNNNTGG 2 cut(s) 1577, 1809
XmiI GTMKAC 2 cut(s) 527, 1915
XmnI GAANNNNTTC 3 cut(s) 15, 157, 2271
XspI CTAG 4 cut(s) 111, 591, 1410, 2282
Zsp2I ATGCAT 2 cut(s) 2066, 2713
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.