Prupe.8G183500_v2.0.a1

Phototropin-2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0004987
Physical Location & Seq
Reverse (-)
18249627 .. 18261341
11715 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G183500.2

Sequence Viewer

Length: 3003 bp
ATGGAGAAACCAAAGGCTACTAGGCAGCCACCAAAGCCTTCTTCTGTTGTGAGCTCAATTGCCAAGGACCAAGTGGGTAGTGGAGAAAAGCAGACCAGAAAACCTATGGAGGTTTTCCACCTGAGAGAGAACACTAAAAAAGATAATCATGCTGATGCTGCTGGTATTCCAGAAGCAGAAAGTGGATCAGGAAGCACTTCTTTCACTTCTGCTGCTGCCAGAAGAGATTCCATCAACAAGTGGATGGCATTTGAACCTGGGCCCTCAGATGAGCCTAACAAGGTCAAAGCCACTGATTCAAATGGAGGGTTTGGTTCTAATTCTAACAGTCATATTATAACAGAGAAGGCGAGCATAGCAGCCAGAACAGCAGAGTGGGGGCTGGTTATGAAGTCAGATATTGGAGAAGGTAGCTTCAAAGGCACAGGGCCAAGGACATCAGGCGGTGGTGGAGATAAAAGCAAAAACTCATCAGGGAGATTTGAATCAACAAGGACATCAGAGGACTCAAATTTTGGGGGTGAATTTGGAGTTCCTAGGGTTTCTAATGAGTTGAAGGCAGCTCTGTCTACTCTGCAGCAAACATTTGTTGTGTCTGATGCCACAAAACCTGATTGCCCAATTATGTATGCCAGCAGTGGCTTTTTTGGTATGACTGGTTATTCTTCAAAGGAGGTCATTGGAAGAAATTGCCGATTTCTTCAGGGGCCGGAAACGGACCAGGATGAAGTGGCAAAAATCCGAGACGCAGTGAAAAATGGGACAAGCTACTGTGGCAGGCTCTTCAACTACAAGAAAGATGGAACTCCTTTCTGGAATCTTCTCACCATCACCCCAATCAAAGATGAACAAGGAAAAACCATCAAATTTATTGGAATGCAGGTTGAAGTCAGCAAGTACACAGAAGGGGTGAATGAAAAGGAACTAAGGCCAAATGGGTTGCCCAAGTCACTTATCCGCTATGATGCTCGTCAGAAGGAGAAGGCATTAGGCTCCATTAAGGAAGTTGTCGAAACTGTGAAGCATCCACGTTCTCACACCCAGGATGTGAGTCATGAGACTGCTAGCAATCATGGGGAGCAGGATAGCCTTAACCTTGATTATGTTCTGCCTAAATCTGCTGCAATTGCAAATATGAATACACCCGGTCGAAAAATTCCTCAATCGGATGTGAAAGATGATGCATTTCGCATGAGATCTTCTTATGATGCAGGCAAAATATCTAGAAAATCTGGATTCGCTTCTTCAATGGGATTCAAAACAAGGTCTCTAAGCTCTGCAAGCATGCATGAAAAAGAACCTATTGTAGAACCGGAGGTTTTGATGACCACAGATATAGAGTCCTCAGACAGTTGGGACCGCACTGAAAGAGAAAGGGATATGCGCCAAGGAATTGACTTAGCAACCACATTGGAACGCATTGAAAAGAACTTTGTGATTAGTGATCCTAGAATTCCTGATAACCCAATTATATTTGCATCTGATAGCTTTCTGGAACTGACAGAATATACACGTGAAGAAATTTTGGGAAGAAATTGTCGTTTTCTCCAGGGACCTGAAACAGATCAAGCAACTGTCTCAAAGATACGAGATGCCATTAGAGAACAAAGAGAAATTACTGTACAGTTGATCAACTATACCAAGAGTGGAAAAAAGTTTTGGAATTTATTTCATTTGCAACCCATGCGTGACCAAAAGGGTGAACTTCAATATTTCATTGGCGTCCAACTGGATGGCAGTGATCATGTGGAACCTCTCCGAAATCGCCTATCAGAGAGAGCAGAGCTAGAAAGTTCTAAGTTGGTCAAAGCTACCGCAGTAAATGTTGATGAGGCTGTCCGAGAACTTCCTGATGCCAACTTGAGACCAGAAGATTTGTGGGCAATTCATTCTCGGCCTGTCTTCCCAAGGCCTCACAAAAGGGATACTCCTTCTTGGCTAGCAATACAAGAGATTACTGCTCGTGGTGAAAAAATTGGTCTACATCATTTTAAGCCCATAAAACCATTGGGTTGTGGTGATACTGGCAGTGTCCATTTGGTGGAGCTACAAGGTACAGGTGAACTGTATGCTATGAAGGCAATGGAGAAGTCAATAATGTTGAACCGTAACAAGGTTCACCGAGCATGCATTGAAAGGGAGATAATTTCACTACTGGATCATCCTTTTCTTCCCACACTGTACACTTCATTTCAGACTTCTACACACGTTTGTTTGATATCAGACTTTTGCTGTGGTGGAGAGTTATTTGCTTTGCTTGACAAGCAGCCTATGAAACTATTCAAGGAGGACTCTGCGAGGTTCTATGCGGCAGAGGTTGTCATTGCCTTGGAATATCTTCACTGTCTAGGAATAGTTTATCGCGACCTTAAGCCTGAGAACATTTTACTCCAGAAGGATGGGCATGTTGTCTTAACAGACTTTGATTTATCATTTATGACATCCTGTAAACCCCAGATTATAAGGCATCAATTGCCTAACAAAAGAAGGAAATCTAGGAGTCAACCACCACCAACATTTGTTGCAGAACCAGTTACACAATCAAATTCATTCGTTGGAACTGAAGAGTATATTGCTCCTGAAATTATTACTGGTGCAGGCCACAGCAGTGCCATTGATTGGTGGGCTCTTGGTATTTTGTTGTATGAGATGCTCTATGGCCGTACGCCTTTCAGGGGAAAAAATAGACAGAGGACATTCACCAACGTCTTGTACAAAGATCTCACCTTTCCAGGCAGCATTCCGGCAAGCCTAGCAGCGCGGCAGTTGATCAATGCATTGTTGCAAAGAGACCCTGACACACGATTAGGATCCAGTACTGGTGCAAATGAAATCAAGCAACATCCTTTCTTCCGCGGAATTAATTGGCCTTTGATTCGTTGCATGAGCCCTCCGCCATTACAGATGCCTCTTCAGCCCATCGCAAAAGATCCAAAGGCCAAGGATATATCGTGGGAAGATGATGGAGTTCTTGTAAATTCAATGGATTTGGATATTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005794 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0007623 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009637 GO:0009638 GO:0009657 GO:0009658 GO:0009719 GO:0009725 GO:0009735 GO:0009785 GO:0009881 GO:0009882 GO:0009898 GO:0009902 GO:0009903 GO:0009904 GO:0009986 GO:0009987 GO:0010033 GO:0010118 GO:0010119 GO:0010155 GO:0010181 GO:0010359 GO:0010360 GO:0010361 GO:0010362 GO:0012505 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019750 GO:0022898 GO:0023052 GO:0030522 GO:0032409 GO:0032410 GO:0032412 GO:0032413 GO:0032553 GO:0032879 GO:0034762 GO:0034763 GO:0034765 GO:0034766 GO:0035556 GO:0036094 GO:0036211 GO:0038023 GO:0042221 GO:0042802 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043271 GO:0043412 GO:0044070 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0046777 GO:0048037 GO:0048511 GO:0048519 GO:0050662 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051051 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0051716 GO:0060089 GO:0065007 GO:0065009 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0071840 GO:0071944 GO:0097159 GO:0097367 GO:0098552 GO:0098562 GO:0104004 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1903792 GO:1903959 GO:1903960 GO:1904062
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAS_9 Pkinase

Protein Analysis

1001

Amino Acids

111.64

Weight (kDa)

7.6

Isoelectric Point (pI)

40.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 338, 2462
Acc36I ACCTGC 1 cut(s) 871
AccB7I CCANNNNNTGG 2 cut(s) 2041, 2619
AccI GTMKAC 2 cut(s) 569, 1981
AccII CGCG 3 cut(s) 2364, 2761, 2856
AciI CCGC 9 cut(s) 444, 958, 1360, 1815, 2309, 2761, 2854, 2856, 2894
AclWI GGATC 6 cut(s) 193, 1439, 2166, 2805, 2818, 2924
AcoI YGGCCR 1 cut(s) 2659
AcsI RAATTY 9 cut(s) 511, 524, 866, 1155, 1452, 1521, 1663, 2545, 2977
AcuI CTGAAG 3 cut(s) 686, 2583, 2897
AcvI CACGTG 1 cut(s) 1514
AcyI GRCGYC 1 cut(s) 1722
AfaI GTAC 7 cut(s) 899, 1623, 2056, 2183, 2665, 2714, 2818
AfiI CCNNNNNNNGG 4 cut(s) 2041, 2113, 2619, 2675
AflII CTTAAG 1 cut(s) 2369
AflIII ACRYGT 2 cut(s) 1511, 2206
AjnI CCWGG 5 cut(s) 256, 720, 1041, 1548, 2731
AjuI GAANNNNNNNTTGG 4 cut(s) 25, 57, 1642, 1674
AleI CACNNNNGTG 1 cut(s) 2607
AluBI AGCT 9 cut(s) 54, 414, 563, 768, 1275, 1488, 1786, 1811, 2047
AluI AGCT 9 cut(s) 54, 414, 563, 768, 1275, 1488, 1786, 1811, 2047
Alw21I GWGCWC 1 cut(s) 56
Alw26I GTCTC 6 cut(s) 738, 1052, 1272, 1582, 1858, 2784
AlwI GGATC 6 cut(s) 193, 1439, 2166, 2805, 2818, 2924
ApaI GGGCCC 1 cut(s) 264
ApoI RAATTY 9 cut(s) 511, 524, 866, 1155, 1452, 1521, 1663, 2545, 2977
ArsI GACNNNNNNTTYG 2 cut(s) 497, 529
AseI ATTAAT 1 cut(s) 2862
Asp700I GAANNNNTTC 4 cut(s) 196, 226, 2279, 2337
AspA2I CCTAGG 1 cut(s) 536
AspLEI GCGC 2 cut(s) 1386, 2761
AspS9I GGNCC 8 cut(s) 67, 260, 261, 428, 707, 718, 1357, 1553
AsuC2I CCSGG 1 cut(s) 1146
AsuNHI GCTAGC 2 cut(s) 1064, 1939
AvaII GGWCC 4 cut(s) 67, 718, 1357, 1553
AvrII CCTAGG 1 cut(s) 536
BaeGI GKGCMC 1 cut(s) 264
BamHI GGATCC 1 cut(s) 2810
BanII GRGCYC 4 cut(s) 56, 264, 2629, 2891
BauI CACGAG 1 cut(s) 1962
BbrPI CACGTG 1 cut(s) 1514
BbsI GAAGAC 1 cut(s) 1894
Bbv12I GWGCWC 1 cut(s) 56
BccI CCATC 9 cut(s) 238, 239, 794, 836, 869, 1727, 2393, 2927, 2957
BceAI ACGGC 1 cut(s) 2646
BciT130I CCWGG 5 cut(s) 258, 722, 1043, 1550, 2733
BciVI GTATCC 1 cut(s) 1918
BclI TGATCA 3 cut(s) 1629, 1741, 2769
BcnI CCSGG 1 cut(s) 1146
BcoDI GTCTC 6 cut(s) 738, 1052, 1272, 1582, 1858, 2784
BfmI CTRYAG 1 cut(s) 575
BfrI CTTAAG 1 cut(s) 2369
BfuAI ACCTGC 1 cut(s) 871
BfuI GTATCC 1 cut(s) 1918
BglII AGATCT 2 cut(s) 1196, 2719
BlnI CCTAGG 1 cut(s) 536
BmcAI AGTACT 1 cut(s) 2818
Bme1390I CCNGG 6 cut(s) 258, 722, 1043, 1146, 1550, 2733
Bme18I GGWCC 4 cut(s) 67, 718, 1357, 1553
BmgT120I GGNCC 8 cut(s) 67, 260, 261, 428, 707, 718, 1357, 1553
BmiI GGNNCC 7 cut(s) 262, 708, 994, 1358, 1554, 1752, 2812
BmrFI CCNGG 6 cut(s) 258, 722, 1043, 1146, 1550, 2733
BmtI GCTAGC 2 cut(s) 1068, 1943
BpiI GAAGAC 1 cut(s) 1894
BpmI CTGGAG 2 cut(s) 1532, 2375
BpuEI CTTGAG 1 cut(s) 1882
BpuMI CCSGG 1 cut(s) 1146
BsaAI YACGTR 1 cut(s) 1514
BsaBI GATNNNNATC 2 cut(s) 484, 2809
BsaHI GRCGYC 1 cut(s) 1722
BsaI GGTCTC 3 cut(s) 1272, 1858, 2784
BsaWI WCCGGW 1 cut(s) 1312
BsaXI ACNNNNNCTCC 2 cut(s) 2958, 2988
Bsc4I CCNNNNNNNGG 4 cut(s) 2041, 2113, 2619, 2675
Bse1I ACTGG 8 cut(s) 661, 1734, 2029, 2160, 2531, 2596, 2814, 2824
Bse3DI GCAATG 2 cut(s) 2088, 2322
Bse8I GATNNNNATC 2 cut(s) 484, 2809
BseBI CCWGG 5 cut(s) 258, 722, 1043, 1550, 2733
BseJI GATNNNNATC 2 cut(s) 484, 2809
BseLI CCNNNNNNNGG 4 cut(s) 2041, 2113, 2619, 2675
BseMI GCAATG 2 cut(s) 2088, 2322
BseMII CTCAG 4 cut(s) 113, 279, 1359, 2367
BseNI ACTGG 8 cut(s) 661, 1734, 2029, 2160, 2531, 2596, 2814, 2824
BseSI GKGCMC 1 cut(s) 264
BsgI GTGCAG 1 cut(s) 2616
Bsh1236I CGCG 3 cut(s) 2364, 2761, 2856
Bsh1285I CGRYCG 1 cut(s) 1150
BsiEI CGRYCG 1 cut(s) 1150
BsiHKAI GWGCWC 1 cut(s) 56
BsiSI CCGG 4 cut(s) 710, 1146, 1313, 2744
BsiWI CGTACG 1 cut(s) 2663
BslFI GGGAC 3 cut(s) 775, 1370, 1566
BslI CCNNNNNNNGG 4 cut(s) 2041, 2113, 2619, 2675
BsmAI GTCTC 6 cut(s) 738, 1052, 1272, 1582, 1858, 2784
BsmBI CGTCTC 1 cut(s) 738
BsmFI GGGAC 3 cut(s) 775, 1370, 1566
BsmI GAATGC 2 cut(s) 882, 2739
Bso31I GGTCTC 3 cut(s) 1272, 1858, 2784
Bsp120I GGGCCC 1 cut(s) 260
Bsp1286I GDGCHC 4 cut(s) 56, 264, 2629, 2891
Bsp1407I TGTACA 3 cut(s) 1621, 2181, 2712
Bsp68I TCGCGA 1 cut(s) 2364
BspACI CCGC 9 cut(s) 444, 958, 1360, 1815, 2309, 2761, 2854, 2856, 2894
BspCNI CTCAG 4 cut(s) 114, 278, 1358, 2368
BspFNI CGCG 3 cut(s) 2364, 2761, 2856
BspHI TCATGA 1 cut(s) 1054
BspLI GGNNCC 7 cut(s) 262, 708, 994, 1358, 1554, 1752, 2812
BspMAI CTGCAG 1 cut(s) 579
BspMI ACCTGC 1 cut(s) 871
BspOI GCTAGC 2 cut(s) 1068, 1943
BspPI GGATC 6 cut(s) 193, 1439, 2166, 2805, 2818, 2924
BspQI GCTCTTC 1 cut(s) 788
BspTI CTTAAG 1 cut(s) 2369
BspTNI GGTCTC 3 cut(s) 1272, 1858, 2784
BsrDI GCAATG 2 cut(s) 2088, 2322
BsrGI TGTACA 3 cut(s) 1621, 2181, 2712
BsrI ACTGG 8 cut(s) 661, 1734, 2029, 2160, 2531, 2596, 2814, 2824
BssNI GRCGYC 1 cut(s) 1722
BssSI CACGAG 1 cut(s) 1962
BssT1I CCWWGG 7 cut(s) 63, 431, 536, 1387, 1907, 2328, 2940
Bst2BI CACGAG 1 cut(s) 1962
Bst2UI CCWGG 5 cut(s) 258, 722, 1043, 1550, 2733
Bst6I CTCTTC 4 cut(s) 217, 788, 2559, 2916
BstACI GRCGYC 1 cut(s) 1722
BstAFI CTTAAG 1 cut(s) 2369
BstAPI GCANNNNNTGC 2 cut(s) 1684, 2473
BstAUI TGTACA 3 cut(s) 1621, 2181, 2712
BstBAI YACGTR 1 cut(s) 1514
BstDEI CTNAG 8 cut(s) 122, 265, 926, 1271, 1345, 1399, 1797, 2376
BstDSI CCRYGG 1 cut(s) 2854
BstFNI CGCG 3 cut(s) 2364, 2761, 2856
BstHHI GCGC 2 cut(s) 1386, 2761
BstMAI GTCTC 6 cut(s) 738, 1052, 1272, 1582, 1858, 2784
BstMCI CGRYCG 1 cut(s) 1150
BstNI CCWGG 5 cut(s) 258, 722, 1043, 1550, 2733
BstNSI RCATGY 3 cut(s) 1288, 2130, 2408
BstSCI CCNGG 6 cut(s) 256, 720, 1041, 1144, 1548, 2731
BstSFI CTRYAG 1 cut(s) 575
BstSLI GKGCMC 1 cut(s) 264
BstUI CGCG 3 cut(s) 2364, 2761, 2856
BstV2I GAAGAC 1 cut(s) 1894
BstX2I RGATCY 4 cut(s) 1196, 2719, 2810, 2929
BstXI CCANNNNNNTGG 2 cut(s) 1733, 2399
BstYI RGATCY 4 cut(s) 1196, 2719, 2810, 2929
BsuI GTATCC 1 cut(s) 1918
BtgI CCRYGG 1 cut(s) 2854
BtgZI GCGATG 1 cut(s) 2905
BtsI GCAGTG 5 cut(s) 643, 756, 1744, 2035, 2614
BtsIMutI CAGTG 9 cut(s) 291, 643, 756, 1362, 1744, 2035, 2177, 2341, 2614
BtuMI TCGCGA 1 cut(s) 2364
BveI ACCTGC 1 cut(s) 871
CciI TCATGA 1 cut(s) 1054
CfoI GCGC 2 cut(s) 1386, 2761
Cfr13I GGNCC 8 cut(s) 67, 260, 261, 428, 707, 718, 1357, 1553
Cfr42I CCGCGG 1 cut(s) 2857
CseI GACGC 2 cut(s) 755, 1711
Csp6I GTAC 7 cut(s) 898, 1622, 2055, 2182, 2664, 2713, 2817
CviQI GTAC 7 cut(s) 898, 1622, 2055, 2182, 2664, 2713, 2817
DdeI CTNAG 8 cut(s) 122, 265, 926, 1271, 1345, 1399, 1797, 2376
EaeI YGGCCR 1 cut(s) 2659
Eam1104I CTCTTC 4 cut(s) 217, 788, 2559, 2916
EarI CTCTTC 4 cut(s) 217, 788, 2559, 2916
EciI GGCGGA 1 cut(s) 2883
Ecl136II GAGCTC 1 cut(s) 54
Eco130I CCWWGG 7 cut(s) 63, 431, 536, 1387, 1907, 2328, 2940
Eco147I AGGCCT 1 cut(s) 1912
Eco24I GRGCYC 4 cut(s) 56, 264, 2629, 2891
Eco31I GGTCTC 3 cut(s) 1272, 1858, 2784
Eco32I GATATC 1 cut(s) 2220
Eco47I GGWCC 4 cut(s) 67, 718, 1357, 1553
Eco53kI GAGCTC 1 cut(s) 54
Eco57I CTGAAG 3 cut(s) 686, 2583, 2897
Eco72I CACGTG 1 cut(s) 1514
EcoICRI GAGCTC 1 cut(s) 54
EcoO109I RGGNCCY 2 cut(s) 261, 1553
EcoRI GAATTC 1 cut(s) 1452
EcoRII CCWGG 5 cut(s) 256, 720, 1041, 1548, 2731
EcoRV GATATC 1 cut(s) 2220
EcoT14I CCWWGG 7 cut(s) 63, 431, 536, 1387, 1907, 2328, 2940
EcoT22I ATGCAT 4 cut(s) 1186, 1290, 2132, 2779
EcoT38I GRGCYC 4 cut(s) 56, 264, 2629, 2891
ErhI CCWWGG 7 cut(s) 63, 431, 536, 1387, 1907, 2328, 2940
Esp3I CGTCTC 1 cut(s) 738
FalI AAGNNNNNCTT 2 cut(s) 184, 216
FaqI GGGAC 3 cut(s) 775, 1370, 1566
FbaI TGATCA 3 cut(s) 1629, 1741, 2769
FblI GTMKAC 2 cut(s) 569, 1981
FriOI GRGCYC 4 cut(s) 56, 264, 2629, 2891
GlaI GCGC 2 cut(s) 1385, 2760
GsuI CTGGAG 2 cut(s) 1532, 2375
HapII CCGG 4 cut(s) 710, 1146, 1313, 2744
HgaI GACGC 2 cut(s) 755, 1711
HhaI GCGC 2 cut(s) 1386, 2761
Hin1I GRCGYC 1 cut(s) 1722
Hin6I GCGC 2 cut(s) 1384, 2759
HinP1I GCGC 2 cut(s) 1384, 2759
HincII GTYRAC 1 cut(s) 2504
HindII GTYRAC 1 cut(s) 2504
HpaII CCGG 4 cut(s) 710, 1146, 1313, 2744
Hpy166II GTNNAC 9 cut(s) 570, 900, 1703, 1982, 2063, 2119, 2184, 2450, 2504
Hpy8I GTNNAC 9 cut(s) 570, 900, 1703, 1982, 2063, 2119, 2184, 2450, 2504
HpyCH4IV ACGT 4 cut(s) 1030, 1513, 2208, 2706
HpyF3I CTNAG 8 cut(s) 122, 265, 926, 1271, 1345, 1399, 1797, 2376
HpySE526I ACGT 4 cut(s) 1030, 1513, 2208, 2706
Hsp92I GRCGYC 1 cut(s) 1722
HspAI GCGC 2 cut(s) 1384, 2759
Ksp22I TGATCA 3 cut(s) 1629, 1741, 2769
KspI CCGCGG 1 cut(s) 2857
LguI GCTCTTC 1 cut(s) 788
LmnI GCTCC 4 cut(s) 998, 1078, 2044, 2581
MaeII ACGT 4 cut(s) 1030, 1513, 2208, 2706
MaeIII GTNAC 4 cut(s) 948, 1688, 2108, 2533
MfeI CAATTG 3 cut(s) 57, 1125, 2471
MflI RGATCY 4 cut(s) 1196, 2719, 2810, 2929
MhlI GDGCHC 4 cut(s) 56, 264, 2629, 2891
MlyI GAGTC 5 cut(s) 500, 1060, 1349, 2285, 2509
MmeI TCCRAC 2 cut(s) 1750, 2536
Mph1103I ATGCAT 4 cut(s) 1186, 1290, 2132, 2779
MroXI GAANNNNTTC 4 cut(s) 196, 226, 2279, 2337
MseI TTAA 6 cut(s) 999, 1092, 1992, 2370, 2414, 2862
MslI CAYNNNNRTG 2 cut(s) 153, 2607
MspA1I CMGCKG 1 cut(s) 2856
MspCI CTTAAG 1 cut(s) 2369
MspI CCGG 4 cut(s) 710, 1146, 1313, 2744
MspR9I CCNGG 6 cut(s) 258, 722, 1043, 1146, 1550, 2733
MunI CAATTG 3 cut(s) 57, 1125, 2471
Mva1269I GAATGC 2 cut(s) 882, 2739
MvaI CCWGG 5 cut(s) 258, 722, 1043, 1550, 2733
MvnI CGCG 3 cut(s) 2364, 2761, 2856
NciI CCSGG 1 cut(s) 1146
NheI GCTAGC 2 cut(s) 1064, 1939
NlaIV GGNNCC 7 cut(s) 262, 708, 994, 1358, 1554, 1752, 2812
NmeAIII GCCGAG 1 cut(s) 1873
NmuCI GTSAC 2 cut(s) 948, 1688
NruI TCGCGA 1 cut(s) 2364
NsiI ATGCAT 4 cut(s) 1186, 1290, 2132, 2779
NspI RCATGY 3 cut(s) 1288, 2130, 2408
OliI CACNNNNGTG 1 cut(s) 2607
PaeI GCATGC 2 cut(s) 1288, 2130
PagI TCATGA 1 cut(s) 1054
PceI AGGCCT 1 cut(s) 1912
PciSI GCTCTTC 1 cut(s) 788
PctI GAATGC 2 cut(s) 882, 2739
PdmI GAANNNNTTC 4 cut(s) 196, 226, 2279, 2337
PfeI GAWTC 7 cut(s) 227, 296, 485, 817, 1236, 1254, 2875
Pfl23II CGTACG 1 cut(s) 2663
PflMI CCANNNNNTGG 2 cut(s) 2041, 2619
PleI GAGTC 5 cut(s) 500, 1059, 1348, 2285, 2508
PmaCI CACGTG 1 cut(s) 1514
PmlI CACGTG 1 cut(s) 1514
PpsI GAGTC 5 cut(s) 500, 1059, 1348, 2285, 2508
Ppu21I YACGTR 1 cut(s) 1514
PpuMI RGGWCCY 1 cut(s) 1553
PshBI ATTAAT 1 cut(s) 2862
PsiI TTATAA 2 cut(s) 338, 2462
Psp124BI GAGCTC 1 cut(s) 56
Psp5II RGGWCCY 1 cut(s) 1553
Psp6I CCWGG 5 cut(s) 256, 720, 1041, 1548, 2731
PspCI CACGTG 1 cut(s) 1514
PspGI CCWGG 5 cut(s) 256, 720, 1041, 1548, 2731
PspLI CGTACG 1 cut(s) 2663
PspN4I GGNNCC 7 cut(s) 262, 708, 994, 1358, 1554, 1752, 2812
PspOMI GGGCCC 1 cut(s) 260
PspPI GGNCC 8 cut(s) 67, 260, 261, 428, 707, 718, 1357, 1553
PspPPI RGGWCCY 1 cut(s) 1553
PstI CTGCAG 1 cut(s) 579
PsuI RGATCY 4 cut(s) 1196, 2719, 2810, 2929
RruI TCGCGA 1 cut(s) 2364
RsaI GTAC 7 cut(s) 899, 1623, 2056, 2183, 2665, 2714, 2818
RsaNI GTAC 7 cut(s) 898, 1622, 2055, 2182, 2664, 2713, 2817
RseI CAYNNNNRTG 2 cut(s) 153, 2607
SacI GAGCTC 1 cut(s) 56
SacII CCGCGG 1 cut(s) 2857
SapI GCTCTTC 1 cut(s) 788
SaqAI TTAA 6 cut(s) 999, 1092, 1992, 2370, 2414, 2862
Sau96I GGNCC 8 cut(s) 67, 260, 261, 428, 707, 718, 1357, 1553
ScaI AGTACT 1 cut(s) 2818
SchI GAGTC 5 cut(s) 500, 1060, 1349, 2285, 2509
ScrFI CCNGG 6 cut(s) 258, 722, 1043, 1146, 1550, 2733
SduI GDGCHC 4 cut(s) 56, 264, 2629, 2891
SfcI CTRYAG 1 cut(s) 575
Sfr303I CCGCGG 1 cut(s) 2857
SgrBI CCGCGG 1 cut(s) 2857
SinI GGWCC 4 cut(s) 67, 718, 1357, 1553
SmiMI CAYNNNNRTG 2 cut(s) 153, 2607
SmlI CTYRAG 2 cut(s) 1861, 2369
SmoI CTYRAG 2 cut(s) 1861, 2369
SphI GCATGC 2 cut(s) 1288, 2130
SseBI AGGCCT 1 cut(s) 1912
SsiI CCGC 9 cut(s) 444, 958, 1360, 1815, 2309, 2761, 2854, 2856, 2894
SspI AATATT 1 cut(s) 1712
SstI GAGCTC 1 cut(s) 56
StuI AGGCCT 1 cut(s) 1912
StyD4I CCNGG 6 cut(s) 256, 720, 1041, 1144, 1548, 2731
StyI CCWWGG 7 cut(s) 63, 431, 536, 1387, 1907, 2328, 2940
TaiI ACGT 4 cut(s) 1033, 1516, 2211, 2709
TaqI TCGA 2 cut(s) 1011, 1150
TatI WGTACW 5 cut(s) 897, 1621, 2181, 2712, 2816
TauI GCSGC 2 cut(s) 2312, 2764
TfiI GAWTC 7 cut(s) 227, 296, 485, 817, 1236, 1254, 2875
Tru1I TTAA 6 cut(s) 999, 1092, 1992, 2370, 2414, 2862
Tru9I TTAA 6 cut(s) 999, 1092, 1992, 2370, 2414, 2862
TscAI CASTG 9 cut(s) 298, 643, 756, 1369, 1744, 2035, 2184, 2348, 2614
TseFI GTSAC 2 cut(s) 948, 1688
Tsp45I GTSAC 2 cut(s) 948, 1688
TspGWI ACGGA 1 cut(s) 731
TspRI CASTG 9 cut(s) 298, 643, 756, 1369, 1744, 2035, 2184, 2348, 2614
Van91I CCANNNNNTGG 2 cut(s) 2041, 2619
Vha464I CTTAAG 1 cut(s) 2369
VpaK11BI GGWCC 4 cut(s) 67, 718, 1357, 1553
VspI ATTAAT 1 cut(s) 2862
XapI RAATTY 9 cut(s) 511, 524, 866, 1155, 1452, 1521, 1663, 2545, 2977
XbaI TCTAGA 1 cut(s) 1223
XceI RCATGY 3 cut(s) 1288, 2130, 2408
XcmI CCANNNNNNNNNTGG 5 cut(s) 70, 77, 103, 1875, 2005
XmaJI CCTAGG 1 cut(s) 536
XmiI GTMKAC 2 cut(s) 569, 1981
XmnI GAANNNNTTC 4 cut(s) 196, 226, 2279, 2337
ZrmI AGTACT 1 cut(s) 2818
Zsp2I ATGCAT 4 cut(s) 1186, 1290, 2132, 2779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.