Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006614

Physical Location & Seq

Genomic Coordinates Reverse (-)

25122803 .. 25132716

Gene Structure 9914 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G62600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2877 bp

ATGGAGCATCAGAACGCGGTCAAAGAAGCCCTAAACGCACTGTATCATCACCCGGATGATACAGTGCGTGTGCACGCTGATCGCTGGCTTCAGAACTTCCAAGGAACTCTCGATGCTTGGCAGGTTGCGGATAATTTACTTCATGATTCTTCTAGCAATTTGGAAACTTTGATATTCTGTTCTCAGACCCTTCGAAGCAAGGTTCAACGAGATTTTGAAGAACTACCACCTGGGGCTTTTCAGAAGCTACGGCAATCATTAACGACATTGTTAAAAAAGTTCCACAAGGGCCCTCCAAAAGTTAGGACCCAGATTAGCATTGCTGTTGCTGCCTTGGCGGTGCATGTTCCTGCGGCAGACTGGGGAGATGGTGGTATAATTAGCTGGCTTAGGGATGAGATGCATATGCATCCTGAATATGTGCCTGGTTTCTTGGAACTCTTGACAGTTTTGCCCGAGGAAACATTTAACTACAAAATAGCTGCTCGTCCGGATCGACGACGTCAATTCGAAAAAGAGCTTACTTCTCAAATGGAAGCTGCACTTAGTATCTTATCAGCATGTTTGAAAATATCCGAACTTAAGGAACAGGTTCTCGAGGCATTTGCTTCTTGGCTCCGTCTTAGGCATGGGATTCCTGGAACAGTGCTTGCCTGTCATCCATTGGTGCATGCAGCTCTCTCAAGTTTGAACTGTGATCCACTATCAGAGGCATCTGTTAATGTTATCTCTGAATTGATACATCACACAGCATCACCAAGTTCTGGTGGTATTTCTGCACAAACACCCTTGATTCAAGTTATTGTGCCTCAGATTTTAAGTCTTCAGGCCCATCTAAGAGATTCTTCAAAGGATGAAGAAGATGTCAAAGCTATTGGTCGATTATTCGCTGACGTAGGCGATTCATATGTTGAACTAATAGCTACTGGTTCAGATGAACCAATGGTTATTGTGCATGCCCTGCTGGAAGTTACTGCACACCCAGAATTTGATATAGCCTCGATGACCTTCAACTTTTGGCACAGTCTTCAACTTATGTTGACAAAGAGGGAATCTTATAGTTCATTGGGTAGTGAAGCATCCATTGAAGTTGAGAGAAACCGAAGACTGCATATCTTTCAGCCAGCTTATCAGAGCCTTGTATCTTTGGTTGGCTTCAGAGTTCAGTATCCTGAAGATTATCAAGGCCTCTCATATGAGGACCTTAAGGAATTCAAGCAGACTAGATATGCTGTTGCAGATGTATTAATAGATGCAGCGTTAATCCTGGGAGGGGATACTACTCTTAAGATTCTCTATATGAAGCTTCTTGAGGCCAATGCCCAGACAGGAAACAATTTTCAAGATTGGCGTCCAGCAGAAGCTATTTTGTTCTGTATATGGGCAATATCAAATTATGTTTCGGTTGTTGAAGCTGAAGTGATGCCCCAGGTGATGGCGTTGCTTCAAAATCTTCCTCAGCAAGCGCAACTACTTCAGACAGCATGCTTACTTGTTGGGGCATATTCAAAATGGCTTAATGCTGCACCAGCCAGTGTTTCAATATTACCATCAATCATTAGAATTCTTATGAGTGGAATGGGCACATCTGAAGATTGCGCAGCAGCTGCAGCTTTGGCTTTTAGACATACTTGTGACGATTGCCGAAAAAATCTTTGTGGGTATTTTGAAGATTTGTTTAATATCTATTGTATGGCGATCAATGGCGGTGGTGGTTATAAAGTCTCTGCTGAGGATTCACTAAATCTCGTTGAAGCTTTAGGTATGGTTGTTACCGAACTGCCTTTAGATCAGGCCAAGGGCGCTCTTGAAAAATTATGCTTTTCAGCCGCCTCTCCTCTAGAGGAAGCGGCGAAAGAAGATTTGGAGAAGAAGCATGCACGTGAATTAACTGTTCATATTGACCGATTTGCCTTCCTCTTCAGGTATGTGAACCACCCTGAAGCGGTGGCTGCTGAGATTAATAAGCATTGGGCAATTTTCCGAGTTATTTTTGATGCTCGTCCTTGGGACATGAGGACTATGGAATCTCTATGCAGGGCATGCAAATATGCTGTACGTACTTCTGGAAGATACATAATTGATACAATTGGAGAAATGCTGGAAAAGATTCAATTCCATTATCAGCAGCATCATCAGCCATGCTTTCTATACTTATCCAGTGAAGTTATAAAGATTTTTGGTTCTGATCCATCGTGTGCTGTCTACTTGAAGAACCTGATTGAAACCCTCTTTGCACATACAACATGTCTTATGACAAGTATCAAGGAAGTCACTGCGAGACCAGATATAGCCGATGACTGCTTTTTGTTGGCGTCTAGATGTCTTCGCTACTGTCCACATTTATTCATTCCGTCTCCTATATTTCCAGCTCTTGTAAACTGCGCAATGATTGGAATCACAGTGCAGCACAGAGAAGCCTGCCACTCGATATTGACCTTTCTAACCGACATTTTTGACCTCGAGAAGTCTGTGAATGAAGAACAGTTCGTACGGATCAGGGACAATATCATTATTCCTCGGGGAGCTACAATCACCAGAATATTGATAGCCTCATTAGCTGGGGCACTTCCCAGTTCTCGGCTAGATACGGTAACATATTCGCTGCTAGCTCTGACAAGAACATACAGGTTACAAGCAGTGAGTTGGGCTAAGGAAAGTGTAAGCCTGATACCTCGAACAGCCTTGACAGAGACCGAATCTACCAAGTTCTTACAAGCATTGTCCGATATTGCTTATGGAGCAGATGTGAATTCTCTGATAGGACAGGTTGAGGAGCTCTCAGATGTTTGTCGACGTAACCGTACTGTTCAAGAGCTTGTTCAGGCAGCTTTGAAGCCTCTTGAGTTGAATCTGGTTACTGCTCCTGTATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006606 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0010468 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0019219 GO:0019222 GO:0031090 GO:0031323 GO:0031965 GO:0031967 GO:0031975 GO:0033036 GO:0033218 GO:0033365 GO:0034504 GO:0034613 GO:0042277 GO:0042802 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050794 GO:0051169 GO:0051170 GO:0051171 GO:0051179 GO:0051234 GO:0051252 GO:0051641 GO:0051649 GO:0060255 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0080090

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBN_N Xpo1

Protein Analysis

958

Amino Acids

106.92

Weight (kDa)

5.62

Isoelectric Point (pI)

45.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Xpo1	PF08389	98 - 243	2e-21	Exportin 1-like protein
TPR_TNPO3_IPO13_2nd	PF24138	285 - 352	3.9e-15	Transportin-3/Importin-13 second TPR domain
TPR_TNPO3_IPO13_3rd	PF24140	473 - 562	2.1e-07	Transportin-3/Importin-13 third TPR domain
TPR_TNPO3_IPO13_4th	PF24139	652 - 748	1.2e-15	Transportin-3/Importin-13 fourth TPR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006614)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62600
fragaria_vesca	FvH4_5g16030 FvH4_5g16030 FvH4_5g16030 FvH4_5g16030 FvH4_5g16030 FvH4_5g16030
malus_domestica	MD06G1183500.v1.1 MD14G1189400.v1.1
prunus_persica	Prupe.5G182200_v2.0.a1 Prupe.6G220700_v2.0.a1
pyrus_communis	pycom06g16250 pycom14g15710
rosa_chinensis	RchiOBHm_Chr7g0180041
rosa_laevigata	RLG00000005300
rosa_multiflora	Rmu_co8039046.1_g000001 Rmu_ssc0000119.1_g000007 Rmu_ssc0000119.1_g000020 Rmu_ssc0000119.1_g000024
rosa_roxburghii	Rroxscaffold_3G00273180
rosa_rugosa	Rorug06G0430100
rosa_samantha	Rh7AG030300 Rh7BG030200 Rh7CG032000 Rh7DG031000
rosa_wichuraiana	Rw7G002520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1719, 2171
AatII	GACGTC	1 cut(s)	505
Acc16I	TGCGCA	2 cut(s)	1600, 2386
Acc36I	ACCTGC	1 cut(s)	112
AccB7I	CCANNNNNTGG	2 cut(s)	764, 1435
AccI	GTMKAC	2 cut(s)	2205, 2794
AccII	CGCG	1 cut(s)	17
AccIII	TCCGGA	1 cut(s)	490
AciI	CCGC	8 cut(s)	17, 128, 338, 353, 1707, 1830, 1850, 1946
AclWI	GGATC	4 cut(s)	501, 692, 2183, 2504
AcsI	RAATTY	4 cut(s)	986, 1211, 1563, 2752
AcuI	CTGAAG	9 cut(s)	74, 809, 1141, 1194, 1437, 1460, 1611, 1906, 1962
AcvI	CACGTG	1 cut(s)	1883
AcyI	GRCGYC	3 cut(s)	502, 1351, 2315
AfaI	GTAC	4 cut(s)	2058, 2062, 2493, 2806
AfiI	CCNNNNNNNGG	5 cut(s)	764, 1273, 1435, 1945, 2580
AflII	CTTAAG	3 cut(s)	581, 1205, 1286
AflIII	ACRYGT	1 cut(s)	2246
AjnI	CCWGG	5 cut(s)	229, 424, 637, 1266, 1428
AjuI	GAANNNNNNNTTGG	2 cut(s)	1847, 1879
Alw21I	GWGCWC	2 cut(s)	75, 2781
Alw26I	GTCTC	4 cut(s)	1729, 2275, 2361, 2687
Alw44I	GTGCAC	1 cut(s)	71
AlwI	GGATC	4 cut(s)	501, 692, 2183, 2504
AlwNI	CAGNNNCTG	1 cut(s)	1607
Ama87I	CYCGRG	4 cut(s)	455, 596, 2462, 2520
Aor13HI	TCCGGA	1 cut(s)	490
AoxI	GGCC	5 cut(s)	289, 828, 1186, 1314, 1794
ApaI	GGGCCC	1 cut(s)	293
ApaLI	GTGCAC	1 cut(s)	71
ApoI	RAATTY	4 cut(s)	986, 1211, 1563, 2752
AseI	ATTAAT	2 cut(s)	1247, 1962
Asp700I	GAANNNNTTC	2 cut(s)	591, 2109
AspLEI	GCGC	4 cut(s)	1468, 1601, 1805, 2387
AspS9I	GGNCC	5 cut(s)	289, 290, 306, 829, 1201
AsuC2I	CCSGG	1 cut(s)	53
AsuHPI	GGTGA	4 cut(s)	41, 747, 1444, 2527
AsuII	TTCGAA	2 cut(s)	193, 510
AsuNHI	GCTAGC	1 cut(s)	2608
AvaI	CYCGRG	4 cut(s)	455, 596, 2462, 2520
AvaII	GGWCC	2 cut(s)	306, 1201
BaeGI	GKGCMC	4 cut(s)	75, 293, 1586, 2569
BanII	GRGCYC	2 cut(s)	293, 2781
BbrPI	CACGTG	1 cut(s)	1883
BbsI	GAAGAC	4 cut(s)	815, 1019, 1111, 2318
Bbv12I	GWGCWC	2 cut(s)	75, 2781
BbvCI	CCTCAGC	2 cut(s)	1458, 1731
BccI	CCATC	5 cut(s)	362, 840, 1429, 1558, 2200
BceAI	ACGGC	1 cut(s)	266
BcgI	CGANNNNNNTGC	4 cut(s)	62, 96, 587, 621
BciT130I	CCWGG	5 cut(s)	231, 426, 639, 1268, 1430
BciVI	GTATCC	2 cut(s)	1179, 1270
BcnI	CCSGG	1 cut(s)	53
BcoDI	GTCTC	4 cut(s)	1729, 2275, 2361, 2687
BfaI	CTAG	6 cut(s)	153, 1224, 1841, 2319, 2585, 2609
BfmI	CTRYAG	1 cut(s)	1608
BfoI	RGCGCY	1 cut(s)	1806
BfrI	CTTAAG	3 cut(s)	581, 1205, 1286
BfuAI	ACCTGC	1 cut(s)	112
BfuI	GTATCC	2 cut(s)	1179, 1270
Bme1390I	CCNGG	6 cut(s)	53, 231, 426, 639, 1268, 1430
Bme18I	GGWCC	2 cut(s)	306, 1201
BmeT110I	CYCGRG	4 cut(s)	455, 596, 2462, 2520
BmgT120I	GGNCC	5 cut(s)	289, 290, 306, 829, 1201
BmiI	GGNNCC	3 cut(s)	291, 308, 617
BmrFI	CCNGG	6 cut(s)	53, 231, 426, 639, 1268, 1430
BmrI	ACTGGG	2 cut(s)	370, 2568
BmtI	GCTAGC	1 cut(s)	2612
BmuI	ACTGGG	2 cut(s)	370, 2568
BpiI	GAAGAC	4 cut(s)	815, 1019, 1111, 2318
BplI	GAGNNNNNCTC	2 cut(s)	2765, 2797
Bpu10I	CCTNAGC	4 cut(s)	389, 1458, 1731, 2652
Bpu14I	TTCGAA	2 cut(s)	193, 510
BpuEI	CTTGAG	3 cut(s)	667, 1331, 2864
BpuMI	CCSGG	1 cut(s)	53
BsaAI	YACGTR	2 cut(s)	1883, 2060
BsaBI	GATNNNNATC	1 cut(s)	2396
BsaHI	GRCGYC	3 cut(s)	502, 1351, 2315
BsaI	GGTCTC	2 cut(s)	2275, 2687
BsaJI	CCNNGG	9 cut(s)	100, 230, 333, 456, 1267, 1428, 1797, 2006, 2519
BsaWI	WCCGGW	1 cut(s)	490
BsaXI	ACNNNNNCTCC	2 cut(s)	2733, 2763
Bsc4I	CCNNNNNNNGG	5 cut(s)	764, 1273, 1435, 1945, 2580
Bse1I	ACTGG	5 cut(s)	365, 931, 1533, 2160, 2574
Bse3DI	GCAATG	2 cut(s)	318, 2394
Bse8I	GATNNNNATC	1 cut(s)	2396
BseAI	TCCGGA	1 cut(s)	490
BseBI	CCWGG	5 cut(s)	231, 426, 639, 1268, 1430
BseDI	CCNNGG	9 cut(s)	100, 230, 333, 456, 1267, 1428, 1797, 2006, 2519
BseGI	GGATG	6 cut(s)	61, 400, 409, 658, 859, 1079
BseJI	GATNNNNATC	1 cut(s)	2396
BseLI	CCNNNNNNNGG	5 cut(s)	764, 1273, 1435, 1945, 2580
BseMI	GCAATG	2 cut(s)	318, 2394
BseMII	CTCAG	6 cut(s)	197, 824, 1472, 1722, 1947, 2796
BseNI	ACTGG	5 cut(s)	365, 931, 1533, 2160, 2574
BseRI	GAGGAG	2 cut(s)	1827, 2789
BseSI	GKGCMC	4 cut(s)	75, 293, 1586, 2569
BseYI	CCCAGC	1 cut(s)	2561
BsgI	GTGCAG	5 cut(s)	525, 762, 960, 1509, 2426
Bsh1236I	CGCG	1 cut(s)	17
BshFI	GGCC	5 cut(s)	291, 830, 1188, 1316, 1796
BsiHKAI	GWGCWC	2 cut(s)	75, 2781
BsiHKCI	CYCGRG	4 cut(s)	455, 596, 2462, 2520
BsiSI	CCGG	2 cut(s)	53, 491
BsiWI	CGTACG	1 cut(s)	2491
BslFI	GGGAC	2 cut(s)	2024, 2516
BslI	CCNNNNNNNGG	5 cut(s)	764, 1273, 1435, 1945, 2580
BsmAI	GTCTC	4 cut(s)	1729, 2275, 2361, 2687
BsmBI	CGTCTC	1 cut(s)	2361
BsmFI	GGGAC	2 cut(s)	2024, 2516
BsnI	GGCC	5 cut(s)	291, 830, 1188, 1316, 1796
Bso31I	GGTCTC	2 cut(s)	2275, 2687
BsoBI	CYCGRG	4 cut(s)	455, 596, 2462, 2520
Bsp119I	TTCGAA	2 cut(s)	193, 510
Bsp120I	GGGCCC	1 cut(s)	289
Bsp1286I	GDGCHC	5 cut(s)	75, 293, 1586, 2569, 2781
Bsp13I	TCCGGA	1 cut(s)	490
Bsp143I	GATC	7 cut(s)	79, 493, 697, 1698, 1789, 2188, 2496
BspACI	CCGC	8 cut(s)	17, 128, 338, 353, 1707, 1830, 1850, 1946
BspANI	GGCC	5 cut(s)	291, 830, 1188, 1316, 1796
BspCNI	CTCAG	6 cut(s)	196, 823, 1471, 1723, 1948, 2795
BspEI	TCCGGA	1 cut(s)	490
BspFNI	CGCG	1 cut(s)	17
BspHI	TCATGA	1 cut(s)	142
BspLI	GGNNCC	3 cut(s)	291, 308, 617
BspMAI	CTGCAG	1 cut(s)	1612
BspMI	ACCTGC	1 cut(s)	112
BspOI	GCTAGC	1 cut(s)	2612
BspPI	GGATC	4 cut(s)	501, 692, 2183, 2504
BspT104I	TTCGAA	2 cut(s)	193, 510
BspTI	CTTAAG	3 cut(s)	581, 1205, 1286
BspTNI	GGTCTC	2 cut(s)	2275, 2687
BsrDI	GCAATG	2 cut(s)	318, 2394
BsrI	ACTGG	5 cut(s)	365, 931, 1533, 2160, 2574
BssECI	CCNNGG	9 cut(s)	100, 230, 333, 456, 1267, 1428, 1797, 2006, 2519
BssMI	GATC	7 cut(s)	79, 493, 697, 1698, 1789, 2188, 2496
BssNI	GRCGYC	3 cut(s)	502, 1351, 2315
BssT1I	CCWWGG	4 cut(s)	100, 333, 1797, 2006
Bst2UI	CCWGG	5 cut(s)	231, 426, 639, 1268, 1430
Bst6I	CTCTTC	1 cut(s)	1925
BstACI	GRCGYC	3 cut(s)	502, 1351, 2315
BstAFI	CTTAAG	3 cut(s)	581, 1205, 1286
BstAPI	GCANNNNNTGC	3 cut(s)	961, 1607, 2043
BstBAI	YACGTR	2 cut(s)	1883, 2060
BstBI	TTCGAA	2 cut(s)	193, 510
BstF5I	GGATG	6 cut(s)	61, 400, 409, 658, 859, 1079
BstFNI	CGCG	1 cut(s)	17
BstH2I	RGCGCY	1 cut(s)	1806
BstHHI	GCGC	4 cut(s)	1468, 1601, 1805, 2387
BstKTI	GATC	7 cut(s)	82, 496, 700, 1701, 1792, 2191, 2499
BstMAI	GTCTC	4 cut(s)	1729, 2275, 2361, 2687
BstMBI	GATC	7 cut(s)	79, 493, 697, 1698, 1789, 2188, 2496
BstNI	CCWGG	5 cut(s)	231, 426, 639, 1268, 1430
BstNSI	RCATGY	8 cut(s)	347, 564, 674, 959, 1488, 1880, 2046, 2250
BstSCI	CCNGG	6 cut(s)	51, 229, 424, 637, 1266, 1428
BstSFI	CTRYAG	1 cut(s)	1608
BstSLI	GKGCMC	4 cut(s)	75, 293, 1586, 2569
BstSNI	TACGTA	1 cut(s)	2060
BstUI	CGCG	1 cut(s)	17
BstV2I	GAAGAC	4 cut(s)	815, 1019, 1111, 2318
BsuI	GTATCC	2 cut(s)	1179, 1270
BsuRI	GGCC	5 cut(s)	291, 830, 1188, 1316, 1796
BtsCI	GGATG	6 cut(s)	61, 400, 409, 658, 859, 1079
BtsI	GCAGTG	2 cut(s)	2274, 2646
BtsIMutI	CAGTG	8 cut(s)	38, 69, 651, 1540, 2167, 2274, 2409, 2646
BveI	ACCTGC	1 cut(s)	112
CaiI	CAGNNNCTG	1 cut(s)	1607
CciI	TCATGA	1 cut(s)	142
CfoI	GCGC	4 cut(s)	1468, 1601, 1805, 2387
Cfr13I	GGNCC	5 cut(s)	289, 290, 306, 829, 1201
CseI	GACGC	2 cut(s)	1340, 2304
Csp6I	GTAC	4 cut(s)	2057, 2061, 2492, 2805
CspCI	CAANNNNNGTGG	2 cut(s)	1690, 1725
CviQI	GTAC	4 cut(s)	2057, 2061, 2492, 2805
DpnI	GATC	7 cut(s)	81, 495, 699, 1700, 1791, 2190, 2498
DpnII	GATC	7 cut(s)	79, 493, 697, 1698, 1789, 2188, 2496
Eam1104I	CTCTTC	1 cut(s)	1925
EarI	CTCTTC	1 cut(s)	1925
Ecl136II	GAGCTC	1 cut(s)	2779
Eco105I	TACGTA	1 cut(s)	2060
Eco130I	CCWWGG	4 cut(s)	100, 333, 1797, 2006
Eco147I	AGGCCT	1 cut(s)	1188
Eco24I	GRGCYC	2 cut(s)	293, 2781
Eco31I	GGTCTC	2 cut(s)	2275, 2687
Eco47I	GGWCC	2 cut(s)	306, 1201
Eco53kI	GAGCTC	1 cut(s)	2779
Eco57I	CTGAAG	9 cut(s)	74, 809, 1141, 1194, 1437, 1460, 1611, 1906, 1962
Eco72I	CACGTG	1 cut(s)	1883
Eco88I	CYCGRG	4 cut(s)	455, 596, 2462, 2520
EcoICRI	GAGCTC	1 cut(s)	2779
EcoO109I	RGGNCCY	4 cut(s)	289, 290, 306, 1201
EcoRI	GAATTC	3 cut(s)	1211, 1563, 2752
EcoRII	CCWGG	5 cut(s)	229, 424, 637, 1266, 1428
EcoT14I	CCWWGG	4 cut(s)	100, 333, 1797, 2006
EcoT22I	ATGCAT	2 cut(s)	405, 411
EcoT38I	GRGCYC	2 cut(s)	293, 2781
ErhI	CCWWGG	4 cut(s)	100, 333, 1797, 2006
Esp3I	CGTCTC	1 cut(s)	2361
FalI	AAGNNNNNCTT	4 cut(s)	528, 560, 829, 861
FaqI	GGGAC	2 cut(s)	2024, 2516
FauNDI	CATATG	3 cut(s)	405, 907, 1195
FblI	GTMKAC	2 cut(s)	2205, 2794
FokI	GGATG	6 cut(s)	68, 396, 407, 645, 866, 1066
FriOI	GRGCYC	2 cut(s)	293, 2781
FspBI	CTAG	6 cut(s)	153, 1224, 1841, 2319, 2585, 2609
FspI	TGCGCA	2 cut(s)	1600, 2386
GlaI	GCGC	4 cut(s)	1467, 1600, 1804, 2386
GsaI	CCCAGC	1 cut(s)	2565
HaeII	RGCGCY	1 cut(s)	1806
HaeIII	GGCC	5 cut(s)	291, 830, 1188, 1316, 1796
HapII	CCGG	2 cut(s)	53, 491
HgaI	GACGC	2 cut(s)	1340, 2304
HhaI	GCGC	4 cut(s)	1468, 1601, 1805, 2387
Hin1I	GRCGYC	3 cut(s)	502, 1351, 2315
Hin6I	GCGC	4 cut(s)	1466, 1599, 1803, 2385
HinP1I	GCGC	4 cut(s)	1466, 1599, 1803, 2385
HincII	GTYRAC	2 cut(s)	1041, 2795
HindII	GTYRAC	2 cut(s)	1041, 2795
HindIII	AAGCTT	2 cut(s)	1304, 1755
HpaII	CCGG	2 cut(s)	53, 491
HphI	GGTGA	4 cut(s)	41, 747, 1444, 2527
Hpy166II	GTNNAC	7 cut(s)	73, 1041, 1933, 2206, 2339, 2380, 2795
Hpy8I	GTNNAC	7 cut(s)	73, 1041, 1933, 2206, 2339, 2380, 2795
Hpy99I	CGWCG	3 cut(s)	501, 504, 2799
HpyAV	CCTTC	3 cut(s)	200, 1018, 1924
HpyCH4IV	ACGT	5 cut(s)	502, 894, 1882, 2059, 2797
HpySE526I	ACGT	5 cut(s)	502, 894, 1882, 2059, 2797
Hsp92I	GRCGYC	3 cut(s)	502, 1351, 2315
HspAI	GCGC	4 cut(s)	1466, 1599, 1803, 2385
Kpn2I	TCCGGA	1 cut(s)	490
Kzo9I	GATC	7 cut(s)	79, 493, 697, 1698, 1789, 2188, 2496
LmnI	GCTCC	6 cut(s)	4, 621, 2525, 2741, 2776, 2869
MaeI	CTAG	6 cut(s)	153, 1224, 1841, 2319, 2585, 2609
MaeII	ACGT	5 cut(s)	502, 894, 1882, 2059, 2797
MaeIII	GTNAC	8 cut(s)	970, 1634, 1771, 2272, 2593, 2631, 2798, 2857
MalI	GATC	7 cut(s)	81, 495, 699, 1700, 1791, 2190, 2498
MboI	GATC	7 cut(s)	79, 493, 697, 1698, 1789, 2188, 2496
MfeI	CAATTG	1 cut(s)	2088
MhlI	GDGCHC	5 cut(s)	75, 293, 1586, 2569, 2781
Mph1103I	ATGCAT	2 cut(s)	405, 411
MroI	TCCGGA	1 cut(s)	490
MroXI	GAANNNNTTC	2 cut(s)	591, 2109
MslI	CAYNNNNRTG	3 cut(s)	54, 1632, 1881
MspA1I	CMGCKG	1 cut(s)	1607
MspCI	CTTAAG	3 cut(s)	581, 1205, 1286
MspI	CCGG	2 cut(s)	53, 491
MspR9I	CCNGG	6 cut(s)	53, 231, 426, 639, 1268, 1430
MunI	CAATTG	1 cut(s)	2088
MvaI	CCWGG	5 cut(s)	231, 426, 639, 1268, 1430
MvnI	CGCG	1 cut(s)	17
NciI	CCSGG	1 cut(s)	53
NdeI	CATATG	3 cut(s)	405, 907, 1195
NdeII	GATC	7 cut(s)	79, 493, 697, 1698, 1789, 2188, 2496
NheI	GCTAGC	1 cut(s)	2608
NlaIV	GGNNCC	3 cut(s)	291, 308, 617
NmeAIII	GCCGAG	1 cut(s)	2560
NmuCI	GTSAC	2 cut(s)	1634, 2272
NsbI	TGCGCA	2 cut(s)	1600, 2386
NsiI	ATGCAT	2 cut(s)	405, 411
NspI	RCATGY	8 cut(s)	347, 564, 674, 959, 1488, 1880, 2046, 2250
NspV	TTCGAA	2 cut(s)	193, 510
PaeI	GCATGC	5 cut(s)	674, 959, 1488, 1880, 2046
PaeR7I	CTCGAG	2 cut(s)	596, 2462
PagI	TCATGA	1 cut(s)	142
PceI	AGGCCT	1 cut(s)	1188
PciI	ACATGT	1 cut(s)	2246
PcsI	WCGNNNNNNNCGW	2 cut(s)	493, 2800
PdmI	GAANNNNTTC	2 cut(s)	591, 2109
Pfl23II	CGTACG	1 cut(s)	2491
PflFI	GACNNNGTC	1 cut(s)	501
PflMI	CCANNNNNTGG	2 cut(s)	764, 1435
PfoI	TCCNGGA	1 cut(s)	637
PmaCI	CACGTG	1 cut(s)	1883
PmlI	CACGTG	1 cut(s)	1883
Ppu21I	YACGTR	2 cut(s)	1883, 2060
PpuMI	RGGWCCY	2 cut(s)	306, 1201
PscI	ACATGT	1 cut(s)	2246
PshBI	ATTAAT	2 cut(s)	1247, 1962
PsiI	TTATAA	2 cut(s)	1719, 2171
Psp124BI	GAGCTC	1 cut(s)	2781
Psp5II	RGGWCCY	2 cut(s)	306, 1201
Psp6I	CCWGG	5 cut(s)	229, 424, 637, 1266, 1428
PspCI	CACGTG	1 cut(s)	1883
PspFI	CCCAGC	1 cut(s)	2561
PspGI	CCWGG	5 cut(s)	229, 424, 637, 1266, 1428
PspLI	CGTACG	1 cut(s)	2491
PspN4I	GGNNCC	3 cut(s)	291, 308, 617
PspOMI	GGGCCC	1 cut(s)	289
PspPI	GGNCC	5 cut(s)	289, 290, 306, 829, 1201
PspPPI	RGGWCCY	2 cut(s)	306, 1201
PsrI	GAACNNNNNNTAC	2 cut(s)	2475, 2507
PstI	CTGCAG	1 cut(s)	1612
PstNI	CAGNNNCTG	1 cut(s)	1607
PsyI	GACNNNGTC	1 cut(s)	501
PvuII	CAGCTG	1 cut(s)	1607
RsaI	GTAC	4 cut(s)	2058, 2062, 2493, 2806
RsaNI	GTAC	4 cut(s)	2057, 2061, 2492, 2805
RseI	CAYNNNNRTG	3 cut(s)	54, 1632, 1881
SacI	GAGCTC	1 cut(s)	2781
SalI	GTCGAC	1 cut(s)	2793
Sau3AI	GATC	7 cut(s)	79, 493, 697, 1698, 1789, 2188, 2496
Sau96I	GGNCC	5 cut(s)	289, 290, 306, 829, 1201
ScrFI	CCNGG	6 cut(s)	53, 231, 426, 639, 1268, 1430
SduI	GDGCHC	5 cut(s)	75, 293, 1586, 2569, 2781
SfcI	CTRYAG	1 cut(s)	1608
Sfr274I	CTCGAG	2 cut(s)	596, 2462
SfuI	TTCGAA	2 cut(s)	193, 510
SinI	GGWCC	2 cut(s)	306, 1201
SlaI	CTCGAG	2 cut(s)	596, 2462
SmiMI	CAYNNNNRTG	3 cut(s)	54, 1632, 1881
SmlI	CTYRAG	8 cut(s)	581, 596, 682, 1205, 1286, 1310, 2462, 2843
SmoI	CTYRAG	8 cut(s)	581, 596, 682, 1205, 1286, 1310, 2462, 2843
SnaBI	TACGTA	1 cut(s)	2060
SphI	GCATGC	5 cut(s)	674, 959, 1488, 1880, 2046
SseBI	AGGCCT	1 cut(s)	1188
SsiI	CCGC	8 cut(s)	17, 128, 338, 353, 1707, 1830, 1850, 1946
SspI	AATATT	2 cut(s)	1545, 2544
SspMI	CTAG	6 cut(s)	153, 1224, 1841, 2319, 2585, 2609
SstI	GAGCTC	1 cut(s)	2781
StuI	AGGCCT	1 cut(s)	1188
StyD4I	CCNGG	6 cut(s)	51, 229, 424, 637, 1266, 1428
StyI	CCWWGG	4 cut(s)	100, 333, 1797, 2006
TaiI	ACGT	5 cut(s)	505, 897, 1885, 2062, 2800
TaqII	GACCGA	2 cut(s)	1920, 2711
TauI	GCSGC	3 cut(s)	356, 1832, 1853
TscAI	CASTG	8 cut(s)	45, 69, 651, 1540, 2167, 2281, 2409, 2646
TseFI	GTSAC	2 cut(s)	1634, 2272
Tsp45I	GTSAC	2 cut(s)	1634, 2272
TspDTI	ATGAA	9 cut(s)	131, 870, 894, 951, 1053, 1316, 1886, 2338, 2493
TspGWI	ACGGA	3 cut(s)	608, 2343, 2509
TspRI	CASTG	8 cut(s)	45, 69, 651, 1540, 2167, 2281, 2409, 2646
Tth111I	GACNNNGTC	1 cut(s)	501
Van91I	CCANNNNNTGG	2 cut(s)	764, 1435
Vha464I	CTTAAG	3 cut(s)	581, 1205, 1286
VneI	GTGCAC	1 cut(s)	71
VpaK11BI	GGWCC	2 cut(s)	306, 1201
VspI	ATTAAT	2 cut(s)	1247, 1962
XapI	RAATTY	4 cut(s)	986, 1211, 1563, 2752
XbaI	TCTAGA	2 cut(s)	1840, 2318
XceI	RCATGY	8 cut(s)	347, 564, 674, 959, 1488, 1880, 2046, 2250
XhoI	CTCGAG	2 cut(s)	596, 2462
XmiI	GTMKAC	2 cut(s)	2205, 2794
XmnI	GAANNNNTTC	2 cut(s)	591, 2109
XspI	CTAG	6 cut(s)	153, 1224, 1841, 2319, 2585, 2609
ZraI	GACGTC	1 cut(s)	503
Zsp2I	ATGCAT	2 cut(s)	405, 411

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.