Rmu_ssc0000119.1_g000007

Exportin 1-like protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000119.1
Physical Location & Seq
Reverse (-)
21919 .. 26800
4882 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000119.1_g000007.1.cds

Sequence Viewer

Length: 1329 bp
atgcatctgggattattatgggcctggtattcatgtgggctttctagtacacctgtttattggatggtccttttcatggtgttatgtggaccggattgccccgttttctatgttcattccatgaatgcgaaaatccgggcagtgaatggtgaaggtactttgaaagtttgtgctgaggattcattgcatctagtcgaagccttaagcaaggttattagtgaacttcccccagaccaagctaagagggcgctggaggccttgtgtttgccagtcgttagtcctttacaggaagttcttagccaagcgccagagatgctaaataacaggcctgctcgtgatttcacagttcatattgatcggtttggatatgtaacccatgcagaagctgtggcagatgcaatccagaggctttggcccattttcaaagccatctttgatcttcgtgcttgggacatgcggacaatggagtctatttgccgagcttgcaaatacgctgtgagaacttctggaaggtgcatgggaatgacaattggagaaatgctagagaagattcaagaattatataaacagcatcaccaaccatgcttcctttatctctctagtgaagttataaagatatttggctcagacccgtcatgtgctgattatttgaaaaatttgattgaatcactctttcagcacacaacacgtattctcacgagcattcaagaatttacttccagaccagatatagcagatgattgctttctgctcgcatcgagatgcatccgttattgtgcacacttgtttattccttctgcagcatttccagcattagtagattgctcattgattggcattacagttcaacacaggcacctgggttttagtttctgtacttcgcttcttggcagggaggcgtcaaattcaatattgaccttcttatcagatatctttgatcatgcaaactctaccgagggggcaaaatacttacccatcagggatgctgtaattattcctcgaggatcccgcatgacaagagttttgattgctgcattaacaggagcaattccaagctctcgcctagaaaatgtagtaacatacacactgctatcactatctcgaacatacggagcacagtcggtggagtgggccagggagagtgtttcattaattcctttgacggctgtgagagaggttgagcgtgcaagattcttgcaagcattgtcagatgctgcagctggggttaatgtcaatgccctttcagttccactcgaggagctatcagatgtttgccggcgtaaccgtacagtcatggagatcgttcaaggagctttgaggcctgcatga

Protein Analysis

442

Amino Acids

49.24

Weight (kDa)

6.64

Isoelectric Point (pI)

39.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 611
AasI GACNNNNNNGTC 1 cut(s) 466
AbsI CCTCGAGG 1 cut(s) 999
AccB1I GGYRCC 1 cut(s) 855
AciI CCGC 2 cut(s) 457, 1009
AclWI GGATC 2 cut(s) 999, 1012
AcsI RAATTY 3 cut(s) 655, 710, 904
AcyI GRCGYC 1 cut(s) 899
AfaI GTAC 4 cut(s) 49, 157, 877, 1288
AfiI CCNNNNNNNGG 1 cut(s) 76
AflII CTTAAG 1 cut(s) 202
AflIII ACRYGT 1 cut(s) 686
AgsI TTSAA 9 cut(s) 163, 424, 554, 652, 665, 707, 848, 909, 1307
AjnI CCWGG 3 cut(s) 23, 858, 1133
AluBI AGCT 7 cut(s) 239, 386, 482, 1056, 1220, 1261, 1313
AluI AGCT 7 cut(s) 239, 386, 482, 1056, 1220, 1261, 1313
Alw21I GWGCWC 2 cut(s) 781, 1117
Alw44I GTGCAC 1 cut(s) 777
AlwI GGATC 2 cut(s) 999, 1012
AlwNI CAGNNNCTG 2 cut(s) 386, 1214
Ama87I CYCGRG 2 cut(s) 999, 1253
AoxI GGCC 6 cut(s) 21, 255, 326, 413, 1131, 1319
ApaLI GTGCAC 1 cut(s) 777
ApeKI GCWGC 4 cut(s) 800, 1031, 1214, 1217
ApoI RAATTY 3 cut(s) 655, 710, 904
ArsI GACNNNNNNTTYG 2 cut(s) 1006, 1038
AseI ATTAAT 1 cut(s) 1151
AspLEI GCGC 2 cut(s) 250, 307
AspS9I GGNCC 5 cut(s) 21, 67, 89, 414, 1131
AsuC2I CCSGG 1 cut(s) 137
AsuHPI GGTGA 2 cut(s) 161, 566
AvaI CYCGRG 2 cut(s) 999, 1253
AvaII GGWCC 2 cut(s) 67, 89
BaeGI GKGCMC 1 cut(s) 781
BamHI GGATCC 1 cut(s) 1004
BanI GGYRCC 1 cut(s) 855
BauI CACGAG 2 cut(s) 333, 697
Bbv12I GWGCWC 2 cut(s) 781, 1117
BbvCI CCTCAGC 1 cut(s) 174
BbvI GCAGC 4 cut(s) 812, 1018, 1201, 1229
BccI CCATC 3 cut(s) 58, 437, 983
BceAI ACGGC 1 cut(s) 1179
BciT130I CCWGG 3 cut(s) 25, 860, 1135
BclI TGATCA 1 cut(s) 937
BcnI CCSGG 1 cut(s) 137
BfaI CTAG 5 cut(s) 45, 191, 542, 600, 1064
BfmI CTRYAG 2 cut(s) 798, 1215
BfoI RGCGCY 2 cut(s) 251, 308
BfrI CTTAAG 1 cut(s) 202
BisI GCNGC 4 cut(s) 801, 1032, 1215, 1218
BlsI GCNGC 4 cut(s) 802, 1033, 1216, 1219
Bme1390I CCNGG 4 cut(s) 25, 137, 860, 1135
Bme18I GGWCC 2 cut(s) 67, 89
BmeT110I CYCGRG 2 cut(s) 999, 1253
BmgT120I GGNCC 5 cut(s) 21, 67, 89, 414, 1131
BmiI GGNNCC 2 cut(s) 857, 1006
BmrFI CCNGG 4 cut(s) 25, 137, 860, 1135
BpmI CTGGAG 1 cut(s) 272
Bpu10I CCTNAGC 1 cut(s) 174
BpuMI CCSGG 1 cut(s) 137
BsaAI YACGTR 1 cut(s) 689
BsaHI GRCGYC 1 cut(s) 899
BsaJI CCNNGG 3 cut(s) 859, 954, 1134
BsaWI WCCGGW 1 cut(s) 91
BsaXI ACNNNNNCTCC 2 cut(s) 245, 275
Bsc4I CCNNNNNNNGG 1 cut(s) 76
Bse118I RCCGGY 1 cut(s) 1275
Bse1I ACTGG 1 cut(s) 269
Bse3DI GCAATG 1 cut(s) 182
BseBI CCWGG 3 cut(s) 25, 860, 1135
BseDI CCNNGG 3 cut(s) 859, 954, 1134
BseGI GGATG 3 cut(s) 69, 765, 988
BseLI CCNNNNNNNGG 1 cut(s) 76
BseMI GCAATG 1 cut(s) 182
BseMII CTCAG 2 cut(s) 165, 639
BseNI ACTGG 1 cut(s) 269
BseRI GAGGAG 1 cut(s) 1271
BseSI GKGCMC 1 cut(s) 781
BseXI GCAGC 4 cut(s) 812, 1018, 1201, 1229
BseYI CCCAGC 1 cut(s) 1220
BshFI GGCC 6 cut(s) 23, 257, 328, 415, 1133, 1321
BshNI GGYRCC 1 cut(s) 855
BsiHKAI GWGCWC 2 cut(s) 781, 1117
BsiHKCI CYCGRG 2 cut(s) 999, 1253
BsiSI CCGG 3 cut(s) 92, 136, 1276
BslFI GGGAC 1 cut(s) 464
BslI CCNNNNNNNGG 1 cut(s) 76
BsmFI GGGAC 1 cut(s) 464
BsmI GAATGC 2 cut(s) 130, 702
BsnI GGCC 6 cut(s) 23, 257, 328, 415, 1133, 1321
BsoBI CYCGRG 2 cut(s) 999, 1253
Bsp1286I GDGCHC 2 cut(s) 781, 1117
Bsp143I GATC 5 cut(s) 355, 436, 937, 1004, 1299
BspACI CCGC 2 cut(s) 457, 1009
BspANI GGCC 6 cut(s) 23, 257, 328, 415, 1133, 1321
BspCNI CTCAG 2 cut(s) 166, 638
BspLI GGNNCC 2 cut(s) 857, 1006
BspMAI CTGCAG 2 cut(s) 802, 1219
BspPI GGATC 2 cut(s) 999, 1012
BspT107I GGYRCC 1 cut(s) 855
BspTI CTTAAG 1 cut(s) 202
BsrDI GCAATG 1 cut(s) 182
BsrFI RCCGGY 1 cut(s) 1275
BsrI ACTGG 1 cut(s) 269
BssAI RCCGGY 1 cut(s) 1275
BssECI CCNNGG 3 cut(s) 859, 954, 1134
BssMI GATC 5 cut(s) 355, 436, 937, 1004, 1299
BssNI GRCGYC 1 cut(s) 899
BssSI CACGAG 2 cut(s) 333, 697
Bst2BI CACGAG 2 cut(s) 333, 697
Bst2UI CCWGG 3 cut(s) 25, 860, 1135
Bst4CI ACNGT 5 cut(s) 346, 844, 1119, 1286, 1291
BstACI GRCGYC 1 cut(s) 899
BstAFI CTTAAG 1 cut(s) 202
BstBAI YACGTR 1 cut(s) 689
BstC8I GCNNGC 7 cut(s) 330, 484, 753, 1185, 1200, 1277, 1323
BstDEI CTNAG 4 cut(s) 174, 240, 296, 625
BstF5I GGATG 3 cut(s) 69, 765, 988
BstH2I RGCGCY 2 cut(s) 251, 308
BstHHI GCGC 2 cut(s) 250, 307
BstKTI GATC 5 cut(s) 358, 439, 940, 1007, 1302
BstMBI GATC 5 cut(s) 355, 436, 937, 1004, 1299
BstMWI GCNNNNNNNGC 5 cut(s) 245, 254, 313, 483, 809
BstNI CCWGG 3 cut(s) 25, 860, 1135
BstNSI RCATGY 1 cut(s) 457
BstSCI CCNGG 4 cut(s) 23, 135, 858, 1133
BstSFI CTRYAG 2 cut(s) 798, 1215
BstSLI GKGCMC 1 cut(s) 781
BstV1I GCAGC 4 cut(s) 812, 1018, 1201, 1229
BstX2I RGATCY 1 cut(s) 1004
BstYI RGATCY 1 cut(s) 1004
BsuRI GGCC 6 cut(s) 23, 257, 328, 415, 1133, 1321
BtsCI GGATG 3 cut(s) 69, 765, 988
BtsI GCAGTG 2 cut(s) 147, 1085
BtsIMutI CAGTG 2 cut(s) 147, 1085
Cac8I GCNNGC 7 cut(s) 330, 484, 753, 1185, 1200, 1277, 1323
CaiI CAGNNNCTG 2 cut(s) 386, 1214
CfoI GCGC 2 cut(s) 250, 307
Cfr10I RCCGGY 1 cut(s) 1275
Cfr13I GGNCC 5 cut(s) 21, 67, 89, 414, 1131
CseI GACGC 1 cut(s) 888
Csp6I GTAC 4 cut(s) 48, 156, 876, 1287
CviQI GTAC 4 cut(s) 48, 156, 876, 1287
DdeI CTNAG 4 cut(s) 174, 240, 296, 625
DpnI GATC 5 cut(s) 357, 438, 939, 1006, 1301
DpnII GATC 5 cut(s) 355, 436, 937, 1004, 1299
DrdI GACNNNNNNGTC 1 cut(s) 466
DseDI GACNNNNNNGTC 1 cut(s) 466
Eco147I AGGCCT 3 cut(s) 257, 328, 1321
Eco32I GATATC 1 cut(s) 931
Eco47I GGWCC 2 cut(s) 67, 89
Eco88I CYCGRG 2 cut(s) 999, 1253
EcoRII CCWGG 3 cut(s) 23, 858, 1133
EcoRV GATATC 1 cut(s) 931
EcoT22I ATGCAT 2 cut(s) 6, 767
FaqI GGGAC 1 cut(s) 464
FauI CCCGC 1 cut(s) 1016
FbaI TGATCA 1 cut(s) 937
Fnu4HI GCNGC 4 cut(s) 801, 1032, 1215, 1218
FokI GGATG 3 cut(s) 76, 752, 995
Fsp4HI GCNGC 4 cut(s) 801, 1032, 1215, 1218
FspBI CTAG 5 cut(s) 45, 191, 542, 600, 1064
GlaI GCGC 2 cut(s) 249, 306
GluI GCNGC 4 cut(s) 801, 1032, 1215, 1218
GsaI CCCAGC 1 cut(s) 1224
GsuI CTGGAG 1 cut(s) 272
HaeII RGCGCY 2 cut(s) 251, 308
HaeIII GGCC 6 cut(s) 23, 257, 328, 415, 1133, 1321
HapII CCGG 3 cut(s) 92, 136, 1276
HgaI GACGC 1 cut(s) 888
HhaI GCGC 2 cut(s) 250, 307
Hin1I GRCGYC 1 cut(s) 899
Hin6I GCGC 2 cut(s) 248, 305
HinP1I GCGC 2 cut(s) 248, 305
HinfI GANTC 5 cut(s) 179, 467, 550, 665, 1191
HpaII CCGG 3 cut(s) 92, 136, 1276
HphI GGTGA 2 cut(s) 161, 566
Hpy166II GTNNAC 4 cut(s) 50, 89, 221, 779
Hpy188I TCNGA 4 cut(s) 628, 928, 1210, 1267
Hpy188III TCNNGA 9 cut(s) 335, 403, 507, 554, 697, 707, 720, 759, 1101
Hpy8I GTNNAC 4 cut(s) 50, 89, 221, 779
HpyAV CCTTC 4 cut(s) 146, 504, 804, 928
HpyCH4III ACNGT 5 cut(s) 346, 844, 1119, 1286, 1291
HpyCH4IV ACGT 1 cut(s) 688
HpyF10VI GCNNNNNNNGC 5 cut(s) 245, 254, 313, 483, 809
HpyF3I CTNAG 4 cut(s) 174, 240, 296, 625
HpySE526I ACGT 1 cut(s) 688
Hsp92I GRCGYC 1 cut(s) 899
HspAI GCGC 2 cut(s) 248, 305
KroI GCCGGC 1 cut(s) 1275
KroNI GCCGGC 1 cut(s) 1277
Ksp22I TGATCA 1 cut(s) 937
Kzo9I GATC 5 cut(s) 355, 436, 937, 1004, 1299
LmnI GCTCC 4 cut(s) 1043, 1112, 1258, 1310
Lsp1109I GCAGC 4 cut(s) 812, 1018, 1201, 1229
MaeI CTAG 5 cut(s) 45, 191, 542, 600, 1064
MaeII ACGT 1 cut(s) 688
MaeIII GTNAC 3 cut(s) 370, 1075, 1280
MalI GATC 5 cut(s) 357, 438, 939, 1006, 1301
MboI GATC 5 cut(s) 355, 436, 937, 1004, 1299
MboII GAAGA 2 cut(s) 431, 559
MfeI CAATTG 1 cut(s) 528
MflI RGATCY 1 cut(s) 1004
MhlI GDGCHC 2 cut(s) 781, 1117
MluCI AATT 8 cut(s) 528, 557, 655, 710, 904, 990, 1047, 1152
MlyI GAGTC 1 cut(s) 476
Mph1103I ATGCAT 2 cut(s) 6, 767
MroNI GCCGGC 1 cut(s) 1275
MseI TTAA 4 cut(s) 203, 1037, 1151, 1227
MslI CAYNNNNRTG 2 cut(s) 521, 760
MspA1I CMGCKG 1 cut(s) 1220
MspCI CTTAAG 1 cut(s) 202
MspI CCGG 3 cut(s) 92, 136, 1276
MspR9I CCNGG 4 cut(s) 25, 137, 860, 1135
MunI CAATTG 1 cut(s) 528
Mva1269I GAATGC 2 cut(s) 130, 702
MvaI CCWGG 3 cut(s) 25, 860, 1135
MwoI GCNNNNNNNGC 5 cut(s) 245, 254, 313, 483, 809
NaeI GCCGGC 1 cut(s) 1277
NciI CCSGG 1 cut(s) 137
NdeII GATC 5 cut(s) 355, 436, 937, 1004, 1299
NgoMIV GCCGGC 1 cut(s) 1275
NlaIV GGNNCC 2 cut(s) 857, 1006
NmeAIII GCCGAG 1 cut(s) 503
NsiI ATGCAT 2 cut(s) 6, 767
NspI RCATGY 1 cut(s) 457
PaeR7I CTCGAG 2 cut(s) 999, 1253
PceI AGGCCT 3 cut(s) 257, 328, 1321
PctI GAATGC 2 cut(s) 130, 702
PdiI GCCGGC 1 cut(s) 1277
PfeI GAWTC 4 cut(s) 179, 550, 665, 1191
PkrI GCNGC 4 cut(s) 802, 1033, 1216, 1219
PleI GAGTC 1 cut(s) 475
PpsI GAGTC 1 cut(s) 475
Ppu21I YACGTR 1 cut(s) 689
PshBI ATTAAT 1 cut(s) 1151
PsiI TTATAA 1 cut(s) 611
Psp6I CCWGG 3 cut(s) 23, 858, 1133
PspFI CCCAGC 1 cut(s) 1220
PspGI CCWGG 3 cut(s) 23, 858, 1133
PspN4I GGNNCC 2 cut(s) 857, 1006
PspPI GGNCC 5 cut(s) 21, 67, 89, 414, 1131
PspXI VCTCGAGB 2 cut(s) 999, 1253
PstI CTGCAG 2 cut(s) 802, 1219
PstNI CAGNNNCTG 2 cut(s) 386, 1214
PsuI RGATCY 1 cut(s) 1004
PvuII CAGCTG 1 cut(s) 1220
RsaI GTAC 4 cut(s) 49, 157, 877, 1288
RsaNI GTAC 4 cut(s) 48, 156, 876, 1287
RseI CAYNNNNRTG 2 cut(s) 521, 760
SaqAI TTAA 4 cut(s) 203, 1037, 1151, 1227
SatI GCNGC 4 cut(s) 801, 1032, 1215, 1218
Sau3AI GATC 5 cut(s) 355, 436, 937, 1004, 1299
Sau96I GGNCC 5 cut(s) 21, 67, 89, 414, 1131
SchI GAGTC 1 cut(s) 476
ScrFI CCNGG 4 cut(s) 25, 137, 860, 1135
SduI GDGCHC 2 cut(s) 781, 1117
SfcI CTRYAG 2 cut(s) 798, 1215
Sfr274I CTCGAG 2 cut(s) 999, 1253
SinI GGWCC 2 cut(s) 67, 89
SlaI CTCGAG 2 cut(s) 999, 1253
SmiMI CAYNNNNRTG 2 cut(s) 521, 760
SmlI CTYRAG 3 cut(s) 202, 999, 1253
SmoI CTYRAG 3 cut(s) 202, 999, 1253
Sse9I AATT 8 cut(s) 528, 557, 655, 710, 904, 990, 1047, 1152
SseBI AGGCCT 3 cut(s) 257, 328, 1321
SsiI CCGC 2 cut(s) 457, 1009
SspI AATATT 1 cut(s) 912
SspMI CTAG 5 cut(s) 45, 191, 542, 600, 1064
StuI AGGCCT 3 cut(s) 257, 328, 1321
StyD4I CCNGG 4 cut(s) 23, 135, 858, 1133
TaaI ACNGT 5 cut(s) 346, 844, 1119, 1286, 1291
TaiI ACGT 1 cut(s) 691
TaqI TCGA 5 cut(s) 195, 758, 1000, 1102, 1254
TasI AATT 8 cut(s) 528, 557, 655, 710, 904, 990, 1047, 1152
TatI WGTACW 2 cut(s) 47, 875
TfiI GAWTC 4 cut(s) 179, 550, 665, 1191
Tru1I TTAA 4 cut(s) 203, 1037, 1151, 1227
Tru9I TTAA 4 cut(s) 203, 1037, 1151, 1227
TscAI CASTG 2 cut(s) 147, 1092
TseI GCWGC 4 cut(s) 800, 1031, 1214, 1217
TspDTI ATGAA 7 cut(s) 21, 64, 104, 137, 171, 338, 1137
TspGWI ACGGA 2 cut(s) 758, 1125
TspRI CASTG 2 cut(s) 147, 1092
Vha464I CTTAAG 1 cut(s) 202
VneI GTGCAC 1 cut(s) 777
VpaK11BI GGWCC 2 cut(s) 67, 89
VspI ATTAAT 1 cut(s) 1151
XapI RAATTY 3 cut(s) 655, 710, 904
XceI RCATGY 1 cut(s) 457
XhoI CTCGAG 2 cut(s) 999, 1253
XspI CTAG 5 cut(s) 45, 191, 542, 600, 1064
Zsp2I ATGCAT 2 cut(s) 6, 767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.