Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0006614

Physical Location & Seq

Genomic Coordinates Forward (+)

9091230 .. 9101679

Gene Structure 10450 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g16030.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2856 bp

ATGGAGCTCCAGAACACTGTGAAAGATGCCCTAAACGCACTGTACCATCATCCCGACGACGCCGTTCGGATGGAAGCCGATCGCTTTCTGCAGAATTTCCAGAAAACCCTAGACGCCTGGCAGGTTGCTGATAACTTGCTTCACGACTCCACTAGCAATCTGGAAACTTTGATATTTTGCTCCCAGACCCTTAGAAGCAAGGTACAACGAGATTTTGAAGAACTACCTTCTGAAGCTTTTCGCCCATTGCGCGATTCCTTAAATAACTTATTGAGAGAGTTCCATAAGGGTGCCCCTAAAGTCAGAACTCAGATTAGCATTGCTGTTGCTGCTCTGGCTGTACACGTTCCTGCTGAAGATTGGGGGGATGGTGGTATAGTAAACTGGCTTCGGGATGAGATGAATTCACATCCAGAATATATACCCGGATTTTTAGAGTTACTGACAGTTTTGCCTGAGGAAGTATTCAACTACAAGATAGCAGCTCGCCCGGAAAGACGCCGGCAATTCAAGAAAGAACTTACTTCTCAAATGGAGGTTGCTCTTAACATATTGACAGCATGTTTGAATATCAACGAGCTCAAGGAGCAGGTTCTTGAGGCATTTGCTTCTTGGCTTCGGCTGAAGCATGGGATCCCTGGATCTATTCTTGCATCTCACCCATTGGTGCTCACAGCTCTTTCCAGCTTGAATTCTGAATTCGTTTCAGAGGCAGCTGTAAACGTTATTTCCGAGTTGATACACTATACAACATCTAGAGAATCTGGTGGTGTGCAAGTTCAAATGCCTCTAATTCAAGTCATTGTTCCCCAAGTGATGAATCTCAAGGCACAGCTTAGAGACTCTTCCAAGGATGAAGAAGATGTGAAGGCTATTGCTCGATTATTTGCTGACATGGGGGATTCATACGTCGACCTGATTGCAACTGGTTCTGATGAATCAAAGTTGATTGTACAAGCATTATTGGAAGTTGCTGCACATCCAGAATATTATATTGCTTCCATGACATTCAATTTTTGGCATAGTCTTCAGGTGACCTTGACAAGAAGGGATTCTTATATTTCATTGGGTAATGAATTCTCCATTGAAGCTGAGCAAAACAGAAGACTGCATATATTCCGCCCGGCTTATGAGTCGCTCGTATCTTTGGTTAGCTTCCGAATTCAATATCCTCGAGATTATCAAGACCTGTCATATGAGGACCTTAAGGAGTTCAAGCAGACTAGATACGCTGTTGCGGATGTTTTAATTGACGCAGCATCAGTTTTAGGAGGTGATGCGGCACTGAGAATTCTTTACATGAAACTTGATGAGGCCGCAGCCTGCTGTCAGAATGAAGAAAGTGAATGGCGCCCAGCAGAAGCTGCTTTATTTGGCATCCGGGCTATATCAAGTTATGTATCTGTAGTGGAAGCTGAAGTAATGCCTAAGGTCATGGGCAGACTACTAAAACTACCTCAGCATCCCCAACTTCTTCAGACAGTGTGCTTAACAATAGGAGCTTATTCAAAATGGCTTGATGCGGCATCTGGTGGACTCTCTATACTGCCTTCAGTTATAGATGTCCTCATGAATGGCCTTGCTAAATCTGAAGATTCTGCAGCAGCTGCAGCTTTGGCATTTCGGCAGATCTGTGATGATTGCCGGTTAAAGCTCTGTGGATGTTTGGAAGGCCTTTTTAATATATATCACAGGGCAGTGAATGGTGAAGGTACTTTGAAAGTCTGTGCTGACGATTCATTGCATCTAGTTGAAGCTTTAAGCAAGGTCATTAGTGAACTTCCCCCAGACCAAGCTAAAAGGGCTCTTGAGGCCTTGTGTTTGCCAGTCGTTAGTCCTTTACAGGAAGTTCTTAGCCAAGCGCCAGAGATGCTAAATAACAGGCCTGCTCGTGATTTCACAGTTCATATTGATCGGTTTGGGTACATCTTTAGATATGTAACTCATGCAGAAGCTGTGGCAGATGCAGTCCAGAGGCTTTGGCCAATTTTCAAAGCCATATTTGAACTTCGTGCTTGGGACATGCGGACAATGGAGTCTATTTGCCGAGCTTGCAAATACGCTGTGAGAACTTCTGGAAGGTGCATGGGAACTACAATTGGAGAGATGCTAGAGAAGATTCAAGAATTATTTAAACAGCATCACCAACCATGCTTTCTTTATCTCTCTAGTGAAGTTATAAAGATATTTGGCTCAGACCCGTCGTGTGCTGATTATTTGAGAAATTTGATTGAATCACTATTTCAGCATACAACACGTATTCTCACGAGCATCCAAGAATTTACTTCCAGACCAGATATAGCAGATGATTGCTTTCTACTGGCGTCAAGATGCATCCGTTATTGTCCGCACTTGTTTATTCCTTCTGCAGCATTTCCAGCGTTAGTAGATTGCTCCTTGATTGGAATAACAGTACAACACAGGGAGGCGTCAAATTCAATATTGACCTTCTTATCAGATATATTTGATCATGCAAACTCCACTGAGGGGGCAATATACTCACCCATCAGGGATACTGTAATTATTCCTCGAGGACCCAGCATGGCAAGAGTTTTGATTGCTGCATTAACAGGAGCAATTCCAAGCTCTCGCCTAGAAAATGTAACTTATGCACTACTATCACTATCTCGAACATATGGGGCACAGTCAGTGGAGTGGGCCAGGGGGAGTGTTTCATTAATTCCTTCGACGGCTGTGACAGAAGTTGAGCGTGCAAGGTTTTTACAGGCATTGGCAGATGCTGCAGCTGGGGTTAATGTCAATTCCCTTTCAGTTCCACTCGAGGAGCTATCAGATGTTTGCCGGCGTAACCGAACAGTCATGGATATTGTTCAAGGAGCTTTGAGGCCGACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006606 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0010468 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0019219 GO:0019222 GO:0031090 GO:0031323 GO:0031965 GO:0031967 GO:0031975 GO:0033036 GO:0033218 GO:0033365 GO:0034504 GO:0034613 GO:0042277 GO:0042802 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050794 GO:0051169 GO:0051170 GO:0051171 GO:0051179 GO:0051234 GO:0051252 GO:0051641 GO:0051649 GO:0060255 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0080090

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBN_N Xpo1

Protein Analysis

952

Amino Acids

106.11

Weight (kDa)

5.44

Isoelectric Point (pI)

42.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_TNPO3_IPO13_2nd	PF24138	24 - 91	2.9e-15	Transportin-3/Importin-13 second TPR domain
TPR_TNPO3_IPO13_3rd	PF24140	212 - 301	5.8e-08	Transportin-3/Importin-13 third TPR domain
TPR_TNPO3_IPO13_4th	PF24139	394 - 494	1.1e-17	Transportin-3/Importin-13 fourth TPR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006614)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62600
fragaria_vesca	FvH4_5g16030 FvH4_5g16030 FvH4_5g16030 FvH4_5g16030 FvH4_5g16030 FvH4_5g16030
malus_domestica	MD06G1183500.v1.1 MD14G1189400.v1.1
prunus_persica	Prupe.5G182200_v2.0.a1 Prupe.6G220700_v2.0.a1
pyrus_communis	pycom06g16250 pycom14g15710
rosa_chinensis	RchiOBHm_Chr7g0180041
rosa_laevigata	RLG00000005300
rosa_multiflora	Rmu_co8039046.1_g000001 Rmu_ssc0000119.1_g000007 Rmu_ssc0000119.1_g000020 Rmu_ssc0000119.1_g000024
rosa_roxburghii	Rroxscaffold_3G00273180
rosa_rugosa	Rorug06G0430100
rosa_samantha	Rh7AG030300 Rh7BG030200 Rh7CG032000 Rh7DG031000
rosa_wichuraiana	Rw7G002520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2180
AasI	GACNNNNNNGTC	1 cut(s)	2035
AbsI	CCTCGAGG	1 cut(s)	2529
Acc36I	ACCTGC	2 cut(s)	112, 580
AccB1I	GGYRCC	2 cut(s)	290, 1350
AccI	GTMKAC	1 cut(s)	912
AccII	CGCG	1 cut(s)	252
AciI	CCGC	7 cut(s)	1120, 1238, 1280, 1317, 1523, 2026, 2348
AclI	AACGTT	1 cut(s)	723
AclWI	GGATC	3 cut(s)	628, 641, 649
AcoI	YGGCCR	1 cut(s)	1982
AcuI	CTGAAG	8 cut(s)	252, 375, 644, 1013, 1437, 1460, 1536, 1611
AcyI	GRCGYC	6 cut(s)	60, 114, 499, 1351, 2324, 2429
AfaI	GTAC	7 cut(s)	44, 204, 342, 954, 1714, 1925, 2415
AfiI	CCNNNNNNNGG	1 cut(s)	2487
AflII	CTTAAG	1 cut(s)	1205
AflIII	ACRYGT	2 cut(s)	343, 2255
AjnI	CCWGG	3 cut(s)	116, 637, 2660
AjuI	GAANNNNNNNTTGG	2 cut(s)	2139, 2171
Alw21I	GWGCWC	3 cut(s)	9, 582, 672
Alw26I	GTCTC	1 cut(s)	834
AlwI	GGATC	3 cut(s)	628, 641, 649
AlwNI	CAGNNNCTG	4 cut(s)	1364, 1607, 1955, 2741
Ama87I	CYCGRG	3 cut(s)	1173, 2529, 2780
AoxI	GGCC	8 cut(s)	1314, 1576, 1672, 1812, 1883, 1982, 2658, 2846
ArsI	GACNNNNNNTTYG	2 cut(s)	547, 579
AseI	ATTAAT	1 cut(s)	2678
Asp700I	GAANNNNTTC	2 cut(s)	237, 1051
AspLEI	GCGC	3 cut(s)	252, 1353, 1864
AspS9I	GGNCC	3 cut(s)	1201, 2534, 2658
AsuC2I	CCSGG	4 cut(s)	426, 491, 1124, 1382
AsuHPI	GGTGA	6 cut(s)	650, 1045, 1286, 1718, 2135, 2493
AvaI	CYCGRG	3 cut(s)	1173, 2529, 2780
AvaII	GGWCC	2 cut(s)	1201, 2534
AxyI	CCTNAGG	2 cut(s)	456, 1428
BaeGI	GKGCMC	2 cut(s)	295, 2644
BalI	TGGCCA	1 cut(s)	1984
BamHI	GGATCC	1 cut(s)	633
BanI	GGYRCC	2 cut(s)	290, 1350
BanII	GRGCYC	3 cut(s)	9, 582, 1807
BarI	GAAGNNNNNNTAC	2 cut(s)	372, 404
BauI	CACGAG	2 cut(s)	1890, 2266
BbsI	GAAGAC	2 cut(s)	1019, 1111
Bbv12I	GWGCWC	3 cut(s)	9, 582, 672
BbvCI	CCTCAGC	1 cut(s)	1458
BccI	CCATC	4 cut(s)	54, 64, 362, 2513
BceAI	ACGGC	2 cut(s)	47, 2706
BcgI	CGANNNNNNTGC	2 cut(s)	902, 936
BciT130I	CCWGG	3 cut(s)	118, 639, 2662
BciVI	GTATCC	1 cut(s)	2506
BclI	TGATCA	1 cut(s)	2467
BcnI	CCSGG	4 cut(s)	426, 491, 1124, 1382
BcoDI	GTCTC	1 cut(s)	834
BfaI	CTAG	8 cut(s)	110, 153, 756, 1224, 1748, 2111, 2169, 2594
BfmI	CTRYAG	6 cut(s)	89, 1404, 1599, 1608, 2367, 2742
BfoI	RGCGCY	2 cut(s)	1354, 1865
BfrI	CTTAAG	1 cut(s)	1205
BfuAI	ACCTGC	2 cut(s)	112, 580
BfuI	GTATCC	1 cut(s)	2506
BglII	AGATCT	1 cut(s)	1629
BlpI	GCTNAGC	1 cut(s)	1092
Bme1390I	CCNGG	7 cut(s)	118, 426, 491, 639, 1124, 1382, 2662
Bme18I	GGWCC	2 cut(s)	1201, 2534
BmeT110I	CYCGRG	3 cut(s)	1173, 2529, 2780
BmgT120I	GGNCC	3 cut(s)	1201, 2534, 2658
BmiI	GGNNCC	4 cut(s)	292, 635, 1352, 2536
BmrFI	CCNGG	7 cut(s)	118, 426, 491, 639, 1124, 1382, 2662
BpiI	GAAGAC	2 cut(s)	1019, 1111
Bpu10I	CCTNAGC	1 cut(s)	1458
Bpu1102I	GCTNAGC	1 cut(s)	1092
BpuEI	CTTGAG	4 cut(s)	566, 617, 809, 1829
BpuMI	CCSGG	4 cut(s)	426, 491, 1124, 1382
BsaAI	YACGTR	1 cut(s)	2258
BsaHI	GRCGYC	6 cut(s)	60, 114, 499, 1351, 2324, 2429
BsaJI	CCNNGG	3 cut(s)	637, 849, 2661
Bsc4I	CCNNNNNNNGG	1 cut(s)	2487
Bse118I	RCCGGY	3 cut(s)	501, 1644, 2802
Bse1I	ACTGG	4 cut(s)	389, 931, 1826, 2325
Bse21I	CCTNAGG	2 cut(s)	456, 1428
Bse3DI	GCAATG	3 cut(s)	245, 318, 1739
BseBI	CCWGG	3 cut(s)	118, 639, 2662
BseDI	CCNNGG	3 cut(s)	637, 849, 2661
BseLI	CCNNNNNNNGG	1 cut(s)	2487
BseMI	GCAATG	3 cut(s)	245, 318, 1739
BseMII	CTCAG	7 cut(s)	323, 447, 1083, 1277, 1472, 2208, 2475
BseNI	ACTGG	4 cut(s)	389, 931, 1826, 2325
BseRI	GAGGAG	1 cut(s)	2798
BseSI	GKGCMC	2 cut(s)	295, 2644
BseYI	CCCAGC	3 cut(s)	1354, 2537, 2747
BsgI	GTGCAG	1 cut(s)	960
Bsh1236I	CGCG	1 cut(s)	252
Bsh1285I	CGRYCG	1 cut(s)	82
BshFI	GGCC	8 cut(s)	1316, 1578, 1674, 1814, 1885, 1984, 2660, 2848
BshNI	GGYRCC	2 cut(s)	290, 1350
BsiEI	CGRYCG	1 cut(s)	82
BsiHKAI	GWGCWC	3 cut(s)	9, 582, 672
BsiHKCI	CYCGRG	3 cut(s)	1173, 2529, 2780
BsiSI	CCGG	7 cut(s)	426, 491, 502, 1124, 1381, 1645, 2803
BslFI	GGGAC	1 cut(s)	2033
BslI	CCNNNNNNNGG	1 cut(s)	2487
BsmAI	GTCTC	1 cut(s)	834
BsmFI	GGGAC	1 cut(s)	2033
BsnI	GGCC	8 cut(s)	1316, 1578, 1674, 1814, 1885, 1984, 2660, 2848
BsoBI	CYCGRG	3 cut(s)	1173, 2529, 2780
Bsp1286I	GDGCHC	6 cut(s)	9, 295, 582, 672, 1807, 2644
Bsp1407I	TGTACA	2 cut(s)	340, 952
Bsp143I	GATC	6 cut(s)	79, 633, 641, 1629, 1912, 2467
Bsp1720I	GCTNAGC	1 cut(s)	1092
BspACI	CCGC	7 cut(s)	1120, 1238, 1280, 1317, 1523, 2026, 2348
BspANI	GGCC	8 cut(s)	1316, 1578, 1674, 1814, 1885, 1984, 2660, 2848
BspCNI	CTCAG	7 cut(s)	322, 448, 1084, 1278, 1471, 2207, 2476
BspFNI	CGCG	1 cut(s)	252
BspHI	TCATGA	1 cut(s)	1569
BspLI	GGNNCC	4 cut(s)	292, 635, 1352, 2536
BspMAI	CTGCAG	5 cut(s)	93, 1603, 1612, 2371, 2746
BspMI	ACCTGC	2 cut(s)	112, 580
BspPI	GGATC	3 cut(s)	628, 641, 649
BspT107I	GGYRCC	2 cut(s)	290, 1350
BspTI	CTTAAG	1 cut(s)	1205
BsrDI	GCAATG	3 cut(s)	245, 318, 1739
BsrFI	RCCGGY	3 cut(s)	501, 1644, 2802
BsrGI	TGTACA	2 cut(s)	340, 952
BsrI	ACTGG	4 cut(s)	389, 931, 1826, 2325
BssAI	RCCGGY	3 cut(s)	501, 1644, 2802
BssECI	CCNNGG	3 cut(s)	637, 849, 2661
BssMI	GATC	6 cut(s)	79, 633, 641, 1629, 1912, 2467
BssNI	GRCGYC	6 cut(s)	60, 114, 499, 1351, 2324, 2429
BssSI	CACGAG	2 cut(s)	1890, 2266
BssT1I	CCWWGG	1 cut(s)	849
Bst2BI	CACGAG	2 cut(s)	1890, 2266
Bst2UI	CCWGG	3 cut(s)	118, 639, 2662
Bst4CI	ACNGT	9 cut(s)	19, 42, 448, 1483, 1903, 2413, 2518, 2646, 2818
Bst6I	CTCTTC	1 cut(s)	850
BstACI	GRCGYC	6 cut(s)	60, 114, 499, 1351, 2324, 2429
BstAFI	CTTAAG	1 cut(s)	1205
BstAPI	GCANNNNNTGC	3 cut(s)	1364, 1607, 2741
BstAUI	TGTACA	2 cut(s)	340, 952
BstBAI	YACGTR	1 cut(s)	2258
BstC8I	GCNNGC	7 cut(s)	487, 503, 1324, 1887, 2053, 2712, 2804
BstEII	GGTNACC	1 cut(s)	1033
BstFNI	CGCG	1 cut(s)	252
BstH2I	RGCGCY	2 cut(s)	1354, 1865
BstHHI	GCGC	3 cut(s)	252, 1353, 1864
BstKTI	GATC	6 cut(s)	82, 636, 644, 1632, 1915, 2470
BstMAI	GTCTC	1 cut(s)	834
BstMBI	GATC	6 cut(s)	79, 633, 641, 1629, 1912, 2467
BstMCI	CGRYCG	1 cut(s)	82
BstNI	CCWGG	3 cut(s)	118, 639, 2662
BstNSI	RCATGY	2 cut(s)	564, 2026
BstPI	GGTNACC	1 cut(s)	1033
BstSCI	CCNGG	7 cut(s)	116, 424, 489, 637, 1122, 1380, 2660
BstSFI	CTRYAG	6 cut(s)	89, 1404, 1599, 1608, 2367, 2742
BstSLI	GKGCMC	2 cut(s)	295, 2644
BstUI	CGCG	1 cut(s)	252
BstV2I	GAAGAC	2 cut(s)	1019, 1111
BstX2I	RGATCY	3 cut(s)	633, 641, 1629
BstYI	RGATCY	3 cut(s)	633, 641, 1629
Bsu36I	CCTNAGG	2 cut(s)	456, 1428
BsuI	GTATCC	1 cut(s)	2506
BsuRI	GGCC	8 cut(s)	1316, 1578, 1674, 1814, 1885, 1984, 2660, 2848
BtsI	GCAGTG	1 cut(s)	1704
BtsIMutI	CAGTG	7 cut(s)	15, 38, 1283, 1488, 1704, 2481, 2655
BveI	ACCTGC	2 cut(s)	112, 580
Cac8I	GCNNGC	7 cut(s)	487, 503, 1324, 1887, 2053, 2712, 2804
CaiI	CAGNNNCTG	4 cut(s)	1364, 1607, 1955, 2741
CciI	TCATGA	1 cut(s)	1569
CfoI	GCGC	3 cut(s)	252, 1353, 1864
Cfr10I	RCCGGY	3 cut(s)	501, 1644, 2802
Cfr13I	GGNCC	3 cut(s)	1201, 2534, 2658
CseI	GACGC	6 cut(s)	68, 122, 507, 1262, 2313, 2418
Csp6I	GTAC	7 cut(s)	43, 203, 341, 953, 1713, 1924, 2414
CviQI	GTAC	7 cut(s)	43, 203, 341, 953, 1713, 1924, 2414
DinI	GGCGCC	1 cut(s)	1352
DpnI	GATC	6 cut(s)	81, 635, 643, 1631, 1914, 2469
DpnII	GATC	6 cut(s)	79, 633, 641, 1629, 1912, 2467
DraI	TTTAAA	1 cut(s)	2134
DrdI	GACNNNNNNGTC	1 cut(s)	2035
DseDI	GACNNNNNNGTC	1 cut(s)	2035
EaeI	YGGCCR	1 cut(s)	1982
Eam1104I	CTCTTC	1 cut(s)	850
EarI	CTCTTC	1 cut(s)	850
EciI	GGCGGA	1 cut(s)	1109
Ecl136II	GAGCTC	2 cut(s)	7, 580
Eco130I	CCWWGG	1 cut(s)	849
Eco147I	AGGCCT	3 cut(s)	1674, 1814, 1885
Eco24I	GRGCYC	3 cut(s)	9, 582, 1807
Eco47I	GGWCC	2 cut(s)	1201, 2534
Eco53kI	GAGCTC	2 cut(s)	7, 580
Eco57I	CTGAAG	8 cut(s)	252, 375, 644, 1013, 1437, 1460, 1536, 1611
Eco81I	CCTNAGG	2 cut(s)	456, 1428
Eco88I	CYCGRG	3 cut(s)	1173, 2529, 2780
Eco91I	GGTNACC	1 cut(s)	1033
EcoICRI	GAGCTC	2 cut(s)	7, 580
EcoO109I	RGGNCCY	2 cut(s)	1201, 2534
EcoO65I	GGTNACC	1 cut(s)	1033
EcoRI	GAATTC	6 cut(s)	403, 691, 698, 1076, 1161, 1290
EcoRII	CCWGG	3 cut(s)	116, 637, 2660
EcoT14I	CCWWGG	1 cut(s)	849
EcoT22I	ATGCAT	1 cut(s)	2336
EcoT38I	GRGCYC	3 cut(s)	9, 582, 1807
EgeI	GGCGCC	1 cut(s)	1352
EheI	GGCGCC	1 cut(s)	1352
ErhI	CCWWGG	1 cut(s)	849
FalI	AAGNNNNNCTT	2 cut(s)	1039, 1071
FaqI	GGGAC	1 cut(s)	2033
FauNDI	CATATG	2 cut(s)	1195, 2635
FbaI	TGATCA	1 cut(s)	2467
FblI	GTMKAC	1 cut(s)	912
FriOI	GRGCYC	3 cut(s)	9, 582, 1807
FspBI	CTAG	8 cut(s)	110, 153, 756, 1224, 1748, 2111, 2169, 2594
GlaI	GCGC	3 cut(s)	251, 1352, 1863
GsaI	CCCAGC	3 cut(s)	1358, 2541, 2751
HaeII	RGCGCY	2 cut(s)	1354, 1865
HaeIII	GGCC	8 cut(s)	1316, 1578, 1674, 1814, 1885, 1984, 2660, 2848
HapII	CCGG	7 cut(s)	426, 491, 502, 1124, 1381, 1645, 2803
HgaI	GACGC	6 cut(s)	68, 122, 507, 1262, 2313, 2418
HhaI	GCGC	3 cut(s)	252, 1353, 1864
Hin1I	GRCGYC	6 cut(s)	60, 114, 499, 1351, 2324, 2429
Hin6I	GCGC	3 cut(s)	250, 1351, 1862
HinP1I	GCGC	3 cut(s)	250, 1351, 1862
HincII	GTYRAC	1 cut(s)	913
HindII	GTYRAC	1 cut(s)	913
HindIII	AAGCTT	2 cut(s)	234, 1755
HpaII	CCGG	7 cut(s)	426, 491, 502, 1124, 1381, 1645, 2803
HphI	GGTGA	6 cut(s)	650, 1045, 1286, 1718, 2135, 2493
Hpy166II	GTNNAC	6 cut(s)	343, 382, 721, 913, 1535, 1778
Hpy8I	GTNNAC	6 cut(s)	343, 382, 721, 913, 1535, 1778
Hpy99I	CGWCG	5 cut(s)	59, 62, 914, 2206, 2692
HpyCH4III	ACNGT	9 cut(s)	19, 42, 448, 1483, 1903, 2413, 2518, 2646, 2818
HpyCH4IV	ACGT	4 cut(s)	345, 723, 909, 2257
HpySE526I	ACGT	4 cut(s)	345, 723, 909, 2257
Hsp92I	GRCGYC	6 cut(s)	60, 114, 499, 1351, 2324, 2429
HspAI	GCGC	3 cut(s)	250, 1351, 1862
KasI	GGCGCC	1 cut(s)	1350
KroI	GCCGGC	2 cut(s)	501, 2802
KroNI	GCCGGC	2 cut(s)	503, 2804
Ksp22I	TGATCA	1 cut(s)	2467
Kzo9I	GATC	6 cut(s)	79, 633, 641, 1629, 1912, 2467
LmnI	GCTCC	9 cut(s)	4, 12, 185, 586, 1499, 2399, 2573, 2785, 2837
MaeI	CTAG	8 cut(s)	110, 153, 756, 1224, 1748, 2111, 2169, 2594
MaeII	ACGT	4 cut(s)	345, 723, 909, 2257
MaeIII	GTNAC	6 cut(s)	438, 1033, 1939, 2602, 2695, 2807
MalI	GATC	6 cut(s)	81, 635, 643, 1631, 1914, 2469
MboI	GATC	6 cut(s)	79, 633, 641, 1629, 1912, 2467
MfeI	CAATTG	1 cut(s)	2097
MflI	RGATCY	3 cut(s)	633, 641, 1629
MhlI	GDGCHC	6 cut(s)	9, 295, 582, 672, 1807, 2644
MlsI	TGGCCA	1 cut(s)	1984
MluNI	TGGCCA	1 cut(s)	1984
Mly113I	GGCGCC	1 cut(s)	1351
MlyI	GAGTC	5 cut(s)	140, 836, 1142, 1530, 2045
Mox20I	TGGCCA	1 cut(s)	1984
Mph1103I	ATGCAT	1 cut(s)	2336
MroNI	GCCGGC	2 cut(s)	501, 2802
MroXI	GAANNNNTTC	2 cut(s)	237, 1051
MscI	TGGCCA	1 cut(s)	1984
MslI	CAYNNNNRTG	1 cut(s)	288
Msp20I	TGGCCA	1 cut(s)	1984
MspA1I	CMGCKG	3 cut(s)	716, 1607, 2747
MspCI	CTTAAG	1 cut(s)	1205
MspI	CCGG	7 cut(s)	426, 491, 502, 1124, 1381, 1645, 2803
MspR9I	CCNGG	7 cut(s)	118, 426, 491, 639, 1124, 1382, 2662
MunI	CAATTG	1 cut(s)	2097
MvaI	CCWGG	3 cut(s)	118, 639, 2662
MvnI	CGCG	1 cut(s)	252
NaeI	GCCGGC	2 cut(s)	503, 2804
NarI	GGCGCC	1 cut(s)	1351
NciI	CCSGG	4 cut(s)	426, 491, 1124, 1382
NdeI	CATATG	2 cut(s)	1195, 2635
NdeII	GATC	6 cut(s)	79, 633, 641, 1629, 1912, 2467
NgoMIV	GCCGGC	2 cut(s)	501, 2802
NlaIV	GGNNCC	4 cut(s)	292, 635, 1352, 2536
NmeAIII	GCCGAG	1 cut(s)	2072
NmuCI	GTSAC	2 cut(s)	1033, 2695
NsiI	ATGCAT	1 cut(s)	2336
NspI	RCATGY	2 cut(s)	564, 2026
PaeR7I	CTCGAG	3 cut(s)	1173, 2529, 2780
PagI	TCATGA	1 cut(s)	1569
PceI	AGGCCT	3 cut(s)	1674, 1814, 1885
PcsI	WCGNNNNNNNCGW	1 cut(s)	729
PdiI	GCCGGC	2 cut(s)	503, 2804
PdmI	GAANNNNTTC	2 cut(s)	237, 1051
Ple19I	CGATCG	1 cut(s)	82
PleI	GAGTC	5 cut(s)	140, 836, 1141, 1530, 2044
PluTI	GGCGCC	1 cut(s)	1354
PpsI	GAGTC	5 cut(s)	140, 836, 1141, 1530, 2044
Ppu21I	YACGTR	1 cut(s)	2258
PpuMI	RGGWCCY	2 cut(s)	1201, 2534
PshBI	ATTAAT	1 cut(s)	2678
PsiI	TTATAA	1 cut(s)	2180
Psp124BI	GAGCTC	2 cut(s)	9, 582
Psp1406I	AACGTT	1 cut(s)	723
Psp5II	RGGWCCY	2 cut(s)	1201, 2534
Psp6I	CCWGG	3 cut(s)	116, 637, 2660
PspEI	GGTNACC	1 cut(s)	1033
PspFI	CCCAGC	3 cut(s)	1354, 2537, 2747
PspGI	CCWGG	3 cut(s)	116, 637, 2660
PspN4I	GGNNCC	4 cut(s)	292, 635, 1352, 2536
PspPI	GGNCC	3 cut(s)	1201, 2534, 2658
PspPPI	RGGWCCY	2 cut(s)	1201, 2534
PspXI	VCTCGAGB	2 cut(s)	2529, 2780
PstI	CTGCAG	5 cut(s)	93, 1603, 1612, 2371, 2746
PstNI	CAGNNNCTG	4 cut(s)	1364, 1607, 1955, 2741
PsuI	RGATCY	3 cut(s)	633, 641, 1629
PvuI	CGATCG	1 cut(s)	82
PvuII	CAGCTG	3 cut(s)	716, 1607, 2747
RsaI	GTAC	7 cut(s)	44, 204, 342, 954, 1714, 1925, 2415
RsaNI	GTAC	7 cut(s)	43, 203, 341, 953, 1713, 1924, 2414
RseI	CAYNNNNRTG	1 cut(s)	288
SacI	GAGCTC	2 cut(s)	9, 582
SalI	GTCGAC	1 cut(s)	911
Sau3AI	GATC	6 cut(s)	79, 633, 641, 1629, 1912, 2467
Sau96I	GGNCC	3 cut(s)	1201, 2534, 2658
SchI	GAGTC	5 cut(s)	140, 836, 1142, 1530, 2045
ScrFI	CCNGG	7 cut(s)	118, 426, 491, 639, 1124, 1382, 2662
SduI	GDGCHC	6 cut(s)	9, 295, 582, 672, 1807, 2644
SfcI	CTRYAG	6 cut(s)	89, 1404, 1599, 1608, 2367, 2742
SfoI	GGCGCC	1 cut(s)	1352
Sfr274I	CTCGAG	3 cut(s)	1173, 2529, 2780
SinI	GGWCC	2 cut(s)	1201, 2534
SlaI	CTCGAG	3 cut(s)	1173, 2529, 2780
SmiMI	CAYNNNNRTG	1 cut(s)	288
SmlI	CTYRAG	8 cut(s)	581, 596, 824, 1173, 1205, 1808, 2529, 2780
SmoI	CTYRAG	8 cut(s)	581, 596, 824, 1173, 1205, 1808, 2529, 2780
SseBI	AGGCCT	3 cut(s)	1674, 1814, 1885
SsiI	CCGC	7 cut(s)	1120, 1238, 1280, 1317, 1523, 2026, 2348
SspDI	GGCGCC	1 cut(s)	1350
SspI	AATATT	2 cut(s)	989, 2442
SspMI	CTAG	8 cut(s)	110, 153, 756, 1224, 1748, 2111, 2169, 2594
SstI	GAGCTC	2 cut(s)	9, 582
StuI	AGGCCT	3 cut(s)	1674, 1814, 1885
StyD4I	CCNGG	7 cut(s)	116, 424, 489, 637, 1122, 1380, 2660
StyI	CCWWGG	1 cut(s)	849
TaaI	ACNGT	9 cut(s)	19, 42, 448, 1483, 1903, 2413, 2518, 2646, 2818
TaiI	ACGT	4 cut(s)	348, 726, 912, 2260
TaqI	TCGA	7 cut(s)	880, 912, 1174, 2530, 2629, 2687, 2781
TatI	WGTACW	3 cut(s)	340, 952, 2413
TauI	GCSGC	3 cut(s)	1283, 1319, 1526
TscAI	CASTG	7 cut(s)	22, 45, 1290, 1488, 1704, 2488, 2655
TseFI	GTSAC	2 cut(s)	1033, 2695
Tsp45I	GTSAC	2 cut(s)	1033, 2695
TspGWI	ACGGA	1 cut(s)	2327
TspRI	CASTG	7 cut(s)	22, 45, 1290, 1488, 1704, 2488, 2655
Vha464I	CTTAAG	1 cut(s)	1205
VpaK11BI	GGWCC	2 cut(s)	1201, 2534
VspI	ATTAAT	1 cut(s)	2678
XbaI	TCTAGA	1 cut(s)	755
XceI	RCATGY	2 cut(s)	564, 2026
XcmI	CCANNNNNNNNNTGG	1 cut(s)	157
XhoI	CTCGAG	3 cut(s)	1173, 2529, 2780
XmiI	GTMKAC	1 cut(s)	912
XmnI	GAANNNNTTC	2 cut(s)	237, 1051
XspI	CTAG	8 cut(s)	110, 153, 756, 1224, 1748, 2111, 2169, 2594
Zsp2I	ATGCAT	1 cut(s)	2336

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.