Prupe.6G220700_v2.0.a1

Exportin 1-like protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
22631318 .. 22632198
881 bp
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UTR
Exon/CDS
Intron
Prupe.6G220700.1

Sequence Viewer

Length: 285 bp
ATGCCCAAGGTACGATGTTGTCCAAATTTCTTTTCTACATCAATTCGAATTTTACTACCTCAAAATCCTCAACTACTTCAGACAGGTATGATCAATTTCTTTTTATTTTGTTGGGATGTGCTAAACATGCTAGTAAATATCAATTCCAGATATGTTAATCATGCAGAAGCAGTGGCAGATGCAATCCAAAGACTTTGGCCAATATTTAAAGCCATATTTGATCTTCGTGCTTGGGACAATGAAGTCTCTGTGCAGATGCAAGTAGGCTGTGAGTTCACTCACTGA

Protein Analysis

95

Amino Acids

10.98

Weight (kDa)

6.69

Isoelectric Point (pI)

32.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 242
AcoI YGGCCR 1 cut(s) 197
AcsI RAATTY 2 cut(s) 25, 48
AcuI CTGAAG 1 cut(s) 62
AfaI GTAC 1 cut(s) 12
AjuI GAANNNNNNNTTGG 2 cut(s) 16, 48
Alw26I GTCTC 1 cut(s) 250
AoxI GGCC 1 cut(s) 197
ApoI RAATTY 2 cut(s) 25, 48
AsuII TTCGAA 1 cut(s) 46
BalI TGGCCA 1 cut(s) 199
BclI TGATCA 1 cut(s) 90
BcoDI GTCTC 1 cut(s) 250
BfaI CTAG 1 cut(s) 131
BmsI GCATC 2 cut(s) 169, 246
Bpu14I TTCGAA 1 cut(s) 46
BsaJI CCNNGG 1 cut(s) 6
BseDI CCNNGG 1 cut(s) 6
BseGI GGATG 1 cut(s) 121
BsgI GTGCAG 1 cut(s) 272
BshFI GGCC 1 cut(s) 199
BslFI GGGAC 1 cut(s) 248
BsmAI GTCTC 1 cut(s) 250
BsmFI GGGAC 1 cut(s) 248
BsnI GGCC 1 cut(s) 199
Bsp119I TTCGAA 1 cut(s) 46
Bsp143I GATC 2 cut(s) 90, 220
BspANI GGCC 1 cut(s) 199
BspT104I TTCGAA 1 cut(s) 46
BssECI CCNNGG 1 cut(s) 6
BssMI GATC 2 cut(s) 90, 220
BssT1I CCWWGG 1 cut(s) 6
BstBI TTCGAA 1 cut(s) 46
BstF5I GGATG 1 cut(s) 121
BstKTI GATC 2 cut(s) 93, 223
BstMAI GTCTC 1 cut(s) 250
BstMBI GATC 2 cut(s) 90, 220
BstMWI GCNNNNNNNGC 1 cut(s) 127
BstNSI RCATGY 1 cut(s) 130
BsuRI GGCC 1 cut(s) 199
BtsCI GGATG 1 cut(s) 121
BtsI GCAGTG 1 cut(s) 177
BtsIMutI CAGTG 2 cut(s) 177, 280
Csp6I GTAC 1 cut(s) 11
CviAII CATG 2 cut(s) 127, 161
CviJI RGCY 3 cut(s) 199, 212, 267
CviKI_1 RGCY 3 cut(s) 199, 212, 267
CviQI GTAC 1 cut(s) 11
DpnI GATC 2 cut(s) 92, 222
DpnII GATC 2 cut(s) 90, 220
DraI TTTAAA 1 cut(s) 208
DrdI GACNNNNNNGTC 1 cut(s) 242
DseDI GACNNNNNNGTC 1 cut(s) 242
EaeI YGGCCR 1 cut(s) 197
Eco130I CCWWGG 1 cut(s) 6
Eco57I CTGAAG 1 cut(s) 62
EcoT14I CCWWGG 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 6
FaeI CATG 2 cut(s) 130, 164
FaiI YATR 5 cut(s) 89, 128, 153, 162, 215
FaqI GGGAC 1 cut(s) 248
FatI CATG 2 cut(s) 126, 160
FbaI TGATCA 1 cut(s) 90
FokI GGATG 1 cut(s) 128
FspBI CTAG 1 cut(s) 131
HaeIII GGCC 1 cut(s) 199
Hin1II CATG 2 cut(s) 130, 164
Hpy166II GTNNAC 1 cut(s) 276
Hpy188I TCNGA 1 cut(s) 81
Hpy188III TCNNGA 1 cut(s) 147
Hpy8I GTNNAC 1 cut(s) 276
HpyCH4V TGCA 4 cut(s) 164, 182, 253, 259
HpyF10VI GCNNNNNNNGC 1 cut(s) 127
Hsp92II CATG 2 cut(s) 130, 164
Ksp22I TGATCA 1 cut(s) 90
Kzo9I GATC 2 cut(s) 90, 220
LpnPI CCDG 2 cut(s) 69, 160
LweI GCATC 2 cut(s) 169, 246
MaeI CTAG 1 cut(s) 131
MalI GATC 2 cut(s) 92, 222
MboI GATC 2 cut(s) 90, 220
MboII GAAGA 1 cut(s) 215
MlsI TGGCCA 1 cut(s) 199
MluCI AATT 5 cut(s) 25, 42, 48, 94, 142
MluNI TGGCCA 1 cut(s) 199
MnlI CCTC 2 cut(s) 69, 78
Mox20I TGGCCA 1 cut(s) 199
MscI TGGCCA 1 cut(s) 199
MseI TTAA 2 cut(s) 156, 207
Msp20I TGGCCA 1 cut(s) 199
MwoI GCNNNNNNNGC 1 cut(s) 127
NdeII GATC 2 cut(s) 90, 220
NlaIII CATG 2 cut(s) 130, 164
NspI RCATGY 1 cut(s) 130
NspV TTCGAA 1 cut(s) 46
RsaI GTAC 1 cut(s) 12
RsaNI GTAC 1 cut(s) 11
SaqAI TTAA 2 cut(s) 156, 207
Sau3AI GATC 2 cut(s) 90, 220
SetI ASST 3 cut(s) 12, 61, 88
SfaNI GCATC 2 cut(s) 169, 246
SfuI TTCGAA 1 cut(s) 46
SgeI CNNG 9 cut(s) 19, 96, 139, 143, 159, 173, 239, 243, 272
Sse9I AATT 5 cut(s) 25, 42, 48, 94, 142
SspI AATATT 1 cut(s) 204
SspMI CTAG 1 cut(s) 131
StyI CCWWGG 1 cut(s) 6
TaqI TCGA 1 cut(s) 46
TasI AATT 5 cut(s) 25, 42, 48, 94, 142
Tru1I TTAA 2 cut(s) 156, 207
Tru9I TTAA 2 cut(s) 156, 207
TscAI CASTG 1 cut(s) 177
TspDTI ATGAA 1 cut(s) 255
TspRI CASTG 1 cut(s) 177
XapI RAATTY 2 cut(s) 25, 48
XceI RCATGY 1 cut(s) 130
XspI CTAG 1 cut(s) 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.