Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0006614

Physical Location & Seq

Genomic Coordinates Reverse (-)

2071215 .. 2099634

Gene Structure 28420 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G002520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2334 bp

ATGCTGGACTACCAGATTAGCAAAACCATGGAGCTCCAGAACACTGTGAAAGAAGCCCTAAACGCACTCTACCACCACCCCGACGACGGCGTTCGGATGCAAGCCGATCGCTTTCTACAGGACTTTCAGCGAACCCTAGACGCCTGGCAGGTTGCTGATAACTTGCTTCATGACGCGACCAGCAATCTAGAAACTTTGATATTTTGCTCCCAGACCCTTAGAAGCAAGGTACAGCGAGATTTTGAAGAACTACCTTCTGAAGCTTTTCGCCCATTGCGCGATTCCTTAAATAACTTATTGAGAGAGTTCCATAAGGGTCCCCCTAAAGTCAGAACTCAGATTAGCATTGCTGTTGCTGCTTTAGCTGTACACGTTCCTGCTGAAGATTGGGGAGATGGTGGTATAGTGAACTGGCTTCGGGATCAGATGAATTCGCATCCAGAATATATACCTGGATTTTTAGAGTTACTAACAGTTTTGCCTGAGGAAGTATTCAACTACAAGATAGCAGCTCGCCCAGAAAGACGTCGCCAATTTGAGAAAGAGCTTACTTCTCAAATGGAGGTTGCTCTTAACATCTTGACAGCTTGTTTGAATATCAATGAGCTCAAGGAGCAGGTTCTTGAGGCATTTGCTTCTTGGCTTCGGCTGAAGCATGGGATCCCTGGATCTTTGCTTGCATCTCACCCATTGGTGCTCACAGCTCTCTCGAGCTTGAATTCTGAACTCCTTTCAGAGGCAGCTGTAAATGTTATTTCTGAGTTGATACACTATACGACATCTAGAGAATCTGGTGGTGTGCAAGTTCAAATGCCTTTAATTCAAGTCATTGTTCCCCAAGTGATGAATCTCAAGGCACAACTTAGAGATTCTTCCAAGGATGAAGAAGATGTGAAGGCTATTGCTCGATTATTTGCTGACATGGGGGATTCATACGTCGACCTGATTGCAACTGGTTCTGATGAATCAAAATTGATTGTACAAGCATTATTGGAAGTTGCTGCACACCCGGAATATTATATAGCTTCCATGACATTCAATTTTTGGCATAGTCTTCAGGTGACCTTGACAAGAAGGGATTCTTATATCTCGTTGGTTAATGAATCCACCATTGAATCTGAGAAAAATAGAAGGCTGCATATATTCCGCCCTGCTTACGAGTCGCTCGTGTCCTTAGTTAGCTTCCGAATTCAATATCCTCGAGATTATCAAGACCTGTCATATGAGGACCTTAAGGAGTTCAAGCAGACTAGATATGCTGTTGCGGATGTCTTAATTGACGCAGCATCAGTTTTAGGAGGCGATGCCGCACTGAGAATTCTTTACATGAAACTTGATGAGGCCGCAGCCTGCTGTCAGAATGAAGAAAGTGAATGGCGCCCAGCAGAAGCTGCTTTATTTGGCATCCGGGCTATATCAAATTATGTATCAGTAGTTGAAGCTGAAGTAATGCCTAAGGTCATGGGCAGACTTCTAAAACTACCTCAGCATCCCCAACTACTTCAGACAGTGTGCTTAACAATAGGAGCTTATTCAAAATGGCTTGATGCGGCATCTGGTGGACTCTCCATACTACCTTCAGTTATAGATGTTCTCATGAGTGGCCTTGCTAAATCCGAAGACTCTGCAGCAGCTGCAGCTTTGGCATTTCGGCAGATCTGTGATGATTGCCGGTTAAAGCTCTGTGGATGTTTGGAAGGCCTTTTCCATATATATCACAGGGCAGTGAATGGTGAAGGTACTTTGAAAGTTTGTGCTGAGGATTCATTGCATCTAGTCGAAGCCTTAAGCAAGGTTATTAGTGAACTTCCCCCAGACCAAGCTAAGAGGGCGCTGGAGGCCTTGTGTTTGCCAGTCGTTAGTCCTTTACAGGAAGTTCTTAGCCAAGCGCCAGAGATGCTAAATAACAGGCCTGCTCGTGATTTCACAGTTCATATTGATCGGTTTGGGTACATCTTTAGATATGTAACCCATGCAGAAGCTGTGGCAGATGCAATCCAGAGGCTTTGGCCCATTTTCAAAGCCATCTTTGATCTTCGTGCTTGGGACATGCGGACAATGGAGTCTATTTGCCGAGCTTGCAAATACGCTGTGAGAACTTCTGGAAGGTGCATGGGAACGACAATTGGAGAAATGCTAGAGAAGATTCAAGAATTATATAAACAGCATCACCAACCATGCTTCCTTTATCTCTCTAGTGAAGTTATAAAGATATTTGGCTCAGACCCATCATGTGCTGATTATTTGAAAAATTTGATTGAATCACTCTTTCAGCACACAACACGTATTCTCACGAGCATTCAAGTAAGGAATTTACTTCCATACCAGATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006606 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0010468 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0019219 GO:0019222 GO:0031090 GO:0031323 GO:0031965 GO:0031967 GO:0031975 GO:0033036 GO:0033218 GO:0033365 GO:0034504 GO:0034613 GO:0042277 GO:0042802 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050794 GO:0051169 GO:0051170 GO:0051171 GO:0051179 GO:0051234 GO:0051252 GO:0051641 GO:0051649 GO:0060255 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0080090

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBN_N Xpo1

Protein Analysis

777

Amino Acids

87.62

Weight (kDa)

5.49

Isoelectric Point (pI)

45.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Xpo1	PF08389	107 - 252	2.5e-21	Exportin 1-like protein
TPR_TNPO3_IPO13_2nd	PF24138	294 - 361	3.6e-15	Transportin-3/Importin-13 second TPR domain
TPR_TNPO3_IPO13_3rd	PF24140	482 - 571	4.7e-08	Transportin-3/Importin-13 third TPR domain
TPR_TNPO3_IPO13_4th	PF24139	664 - 764	8.6e-19	Transportin-3/Importin-13 fourth TPR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006614)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62600
fragaria_vesca	FvH4_5g16030 FvH4_5g16030 FvH4_5g16030 FvH4_5g16030 FvH4_5g16030 FvH4_5g16030
malus_domestica	MD06G1183500.v1.1 MD14G1189400.v1.1
prunus_persica	Prupe.5G182200_v2.0.a1 Prupe.6G220700_v2.0.a1
pyrus_communis	pycom06g16250 pycom14g15710
rosa_chinensis	RchiOBHm_Chr7g0180041
rosa_laevigata	RLG00000005300
rosa_multiflora	Rmu_co8039046.1_g000001 Rmu_ssc0000119.1_g000007 Rmu_ssc0000119.1_g000020 Rmu_ssc0000119.1_g000024
rosa_roxburghii	Rroxscaffold_3G00273180
rosa_rugosa	Rorug06G0430100
rosa_samantha	Rh7AG030300 Rh7BG030200 Rh7CG032000 Rh7DG031000
rosa_wichuraiana	Rw7G002520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2207
AasI	GACNNNNNNGTC	1 cut(s)	2062
AatII	GACGTC	1 cut(s)	529
Acc36I	ACCTGC	2 cut(s)	139, 607
AccB1I	GGYRCC	1 cut(s)	1377
AccI	GTMKAC	1 cut(s)	939
AccII	CGCG	2 cut(s)	176, 279
AciI	CCGC	6 cut(s)	1147, 1265, 1308, 1344, 1550, 2053
AclWI	GGATC	4 cut(s)	429, 655, 668, 676
AcsI	RAATTY	6 cut(s)	430, 718, 1188, 1317, 2251, 2311
AcuI	CTGAAG	7 cut(s)	279, 402, 671, 1040, 1464, 1487, 1563
AcyI	GRCGYC	3 cut(s)	141, 526, 1378
AfaI	GTAC	5 cut(s)	231, 369, 981, 1741, 1952
AfiI	CCNNNNNNNGG	2 cut(s)	86, 736
AflII	CTTAAG	2 cut(s)	1232, 1786
AflIII	ACRYGT	2 cut(s)	370, 2282
AjnI	CCWGG	3 cut(s)	143, 451, 664
Alw21I	GWGCWC	3 cut(s)	36, 609, 699
AlwI	GGATC	4 cut(s)	429, 655, 668, 676
AlwNI	CAGNNNCTG	3 cut(s)	1391, 1634, 1982
Ama87I	CYCGRG	2 cut(s)	709, 1200
AoxI	GGCC	6 cut(s)	1341, 1603, 1699, 1839, 1910, 2009
ApoI	RAATTY	6 cut(s)	430, 718, 1188, 1317, 2251, 2311
ArsI	GACNNNNNNTTYG	2 cut(s)	574, 606
Asp700I	GAANNNNTTC	2 cut(s)	264, 1078
AspLEI	GCGC	4 cut(s)	279, 1380, 1834, 1891
AspS9I	GGNCC	3 cut(s)	317, 1228, 2010
AsuC2I	CCSGG	2 cut(s)	1010, 1409
AsuHPI	GGTGA	4 cut(s)	677, 1072, 1745, 2162
AvaI	CYCGRG	2 cut(s)	709, 1200
AvaII	GGWCC	2 cut(s)	317, 1228
AxyI	CCTNAGG	2 cut(s)	483, 1455
BamHI	GGATCC	1 cut(s)	660
BanI	GGYRCC	1 cut(s)	1377
BanII	GRGCYC	2 cut(s)	36, 609
BauI	CACGAG	3 cut(s)	1166, 1917, 2293
BbsI	GAAGAC	2 cut(s)	1046, 1626
Bbv12I	GWGCWC	3 cut(s)	36, 609, 699
BbvCI	CCTCAGC	2 cut(s)	1485, 1758
BccI	CCATC	3 cut(s)	389, 2033, 2236
BceAI	ACGGC	1 cut(s)	103
BcgI	CGANNNNNNTGC	6 cut(s)	89, 123, 929, 963, 1607, 1641
BciT130I	CCWGG	3 cut(s)	145, 453, 666
BcnI	CCSGG	2 cut(s)	1010, 1409
BfaI	CTAG	7 cut(s)	137, 188, 783, 1251, 1775, 2138, 2196
BfmI	CTRYAG	3 cut(s)	116, 1626, 1635
BfoI	RGCGCY	3 cut(s)	1381, 1835, 1892
BfrI	CTTAAG	2 cut(s)	1232, 1786
BfuAI	ACCTGC	2 cut(s)	139, 607
BglII	AGATCT	1 cut(s)	1656
Bme1390I	CCNGG	5 cut(s)	145, 453, 666, 1010, 1409
Bme18I	GGWCC	2 cut(s)	317, 1228
BmeT110I	CYCGRG	2 cut(s)	709, 1200
BmgT120I	GGNCC	3 cut(s)	317, 1228, 2010
BmiI	GGNNCC	4 cut(s)	318, 319, 662, 1379
BmrFI	CCNGG	5 cut(s)	145, 453, 666, 1010, 1409
BpiI	GAAGAC	2 cut(s)	1046, 1626
BpmI	CTGGAG	2 cut(s)	20, 1856
Bpu10I	CCTNAGC	2 cut(s)	1485, 1758
BpuEI	CTTGAG	3 cut(s)	593, 644, 836
BpuMI	CCSGG	2 cut(s)	1010, 1409
BsaAI	YACGTR	1 cut(s)	2285
BsaHI	GRCGYC	3 cut(s)	141, 526, 1378
BsaJI	CCNNGG	3 cut(s)	27, 664, 876
BsaXI	ACNNNNNCTCC	2 cut(s)	1829, 1859
Bsc4I	CCNNNNNNNGG	2 cut(s)	86, 736
Bse118I	RCCGGY	1 cut(s)	1671
Bse1I	ACTGG	3 cut(s)	416, 958, 1853
Bse21I	CCTNAGG	2 cut(s)	483, 1455
Bse3DI	GCAATG	3 cut(s)	272, 345, 1766
BseBI	CCWGG	3 cut(s)	145, 453, 666
BseDI	CCNNGG	3 cut(s)	27, 664, 876
BseGI	GGATG	7 cut(s)	102, 436, 886, 1273, 1404, 1489, 1694
BseLI	CCNNNNNNNGG	2 cut(s)	86, 736
BseMI	GCAATG	3 cut(s)	272, 345, 1766
BseMII	CTCAG	8 cut(s)	350, 474, 750, 1110, 1304, 1499, 1749, 2235
BseNI	ACTGG	3 cut(s)	416, 958, 1853
BseYI	CCCAGC	1 cut(s)	1381
BsgI	GTGCAG	1 cut(s)	987
Bsh1236I	CGCG	2 cut(s)	176, 279
Bsh1285I	CGRYCG	1 cut(s)	109
BshFI	GGCC	6 cut(s)	1343, 1605, 1701, 1841, 1912, 2011
BshNI	GGYRCC	1 cut(s)	1377
BsiEI	CGRYCG	1 cut(s)	109
BsiHKAI	GWGCWC	3 cut(s)	36, 609, 699
BsiHKCI	CYCGRG	2 cut(s)	709, 1200
BsiSI	CCGG	3 cut(s)	1010, 1408, 1672
BslFI	GGGAC	2 cut(s)	303, 2060
BslI	CCNNNNNNNGG	2 cut(s)	86, 736
BsmFI	GGGAC	2 cut(s)	303, 2060
BsmI	GAATGC	1 cut(s)	2298
BsnI	GGCC	6 cut(s)	1343, 1605, 1701, 1841, 1912, 2011
BsoBI	CYCGRG	2 cut(s)	709, 1200
Bsp1286I	GDGCHC	3 cut(s)	36, 609, 699
Bsp1407I	TGTACA	2 cut(s)	367, 979
Bsp143I	GATC	7 cut(s)	106, 421, 660, 668, 1656, 1939, 2032
Bsp19I	CCATGG	1 cut(s)	27
BspACI	CCGC	6 cut(s)	1147, 1265, 1308, 1344, 1550, 2053
BspANI	GGCC	6 cut(s)	1343, 1605, 1701, 1841, 1912, 2011
BspCNI	CTCAG	8 cut(s)	349, 475, 751, 1111, 1305, 1498, 1750, 2234
BspFNI	CGCG	2 cut(s)	176, 279
BspHI	TCATGA	2 cut(s)	169, 1596
BspLI	GGNNCC	4 cut(s)	318, 319, 662, 1379
BspMAI	CTGCAG	2 cut(s)	1630, 1639
BspMI	ACCTGC	2 cut(s)	139, 607
BspPI	GGATC	4 cut(s)	429, 655, 668, 676
BspT107I	GGYRCC	1 cut(s)	1377
BspTI	CTTAAG	2 cut(s)	1232, 1786
BsrDI	GCAATG	3 cut(s)	272, 345, 1766
BsrFI	RCCGGY	1 cut(s)	1671
BsrGI	TGTACA	2 cut(s)	367, 979
BsrI	ACTGG	3 cut(s)	416, 958, 1853
BssAI	RCCGGY	1 cut(s)	1671
BssECI	CCNNGG	3 cut(s)	27, 664, 876
BssMI	GATC	7 cut(s)	106, 421, 660, 668, 1656, 1939, 2032
BssNI	GRCGYC	3 cut(s)	141, 526, 1378
BssSI	CACGAG	3 cut(s)	1166, 1917, 2293
BssT1I	CCWWGG	2 cut(s)	27, 876
Bst2BI	CACGAG	3 cut(s)	1166, 1917, 2293
Bst2UI	CCWGG	3 cut(s)	145, 453, 666
Bst4CI	ACNGT	4 cut(s)	46, 475, 1510, 1930
BstACI	GRCGYC	3 cut(s)	141, 526, 1378
BstAFI	CTTAAG	2 cut(s)	1232, 1786
BstAPI	GCANNNNNTGC	2 cut(s)	1391, 1634
BstAUI	TGTACA	2 cut(s)	367, 979
BstBAI	YACGTR	1 cut(s)	2285
BstC8I	GCNNGC	6 cut(s)	102, 514, 678, 1351, 1914, 2080
BstDSI	CCRYGG	1 cut(s)	27
BstEII	GGTNACC	1 cut(s)	1060
BstENI	CCTNNNNNAGG	1 cut(s)	734
BstF5I	GGATG	7 cut(s)	102, 436, 886, 1273, 1404, 1489, 1694
BstFNI	CGCG	2 cut(s)	176, 279
BstH2I	RGCGCY	3 cut(s)	1381, 1835, 1892
BstHHI	GCGC	4 cut(s)	279, 1380, 1834, 1891
BstKTI	GATC	7 cut(s)	109, 424, 663, 671, 1659, 1942, 2035
BstMBI	GATC	7 cut(s)	106, 421, 660, 668, 1656, 1939, 2032
BstMCI	CGRYCG	1 cut(s)	109
BstNI	CCWGG	3 cut(s)	145, 453, 666
BstNSI	RCATGY	1 cut(s)	2053
BstPI	GGTNACC	1 cut(s)	1060
BstSCI	CCNGG	5 cut(s)	143, 451, 664, 1008, 1407
BstSFI	CTRYAG	3 cut(s)	116, 1626, 1635
BstUI	CGCG	2 cut(s)	176, 279
BstV2I	GAAGAC	2 cut(s)	1046, 1626
BstX2I	RGATCY	3 cut(s)	660, 668, 1656
BstYI	RGATCY	3 cut(s)	660, 668, 1656
Bsu36I	CCTNAGG	2 cut(s)	483, 1455
BsuRI	GGCC	6 cut(s)	1343, 1605, 1701, 1841, 1912, 2011
BtgI	CCRYGG	1 cut(s)	27
BtgZI	GCGATG	1 cut(s)	1317
BtsCI	GGATG	7 cut(s)	102, 436, 886, 1273, 1404, 1489, 1694
BtsI	GCAGTG	1 cut(s)	1731
BtsIMutI	CAGTG	4 cut(s)	42, 1310, 1515, 1731
BveI	ACCTGC	2 cut(s)	139, 607
Cac8I	GCNNGC	6 cut(s)	102, 514, 678, 1351, 1914, 2080
CaiI	CAGNNNCTG	3 cut(s)	1391, 1634, 1982
CciI	TCATGA	2 cut(s)	169, 1596
CfoI	GCGC	4 cut(s)	279, 1380, 1834, 1891
Cfr10I	RCCGGY	1 cut(s)	1671
Cfr13I	GGNCC	3 cut(s)	317, 1228, 2010
CseI	GACGC	3 cut(s)	149, 182, 1289
Csp6I	GTAC	5 cut(s)	230, 368, 980, 1740, 1951
CviQI	GTAC	5 cut(s)	230, 368, 980, 1740, 1951
DinI	GGCGCC	1 cut(s)	1379
DpnI	GATC	7 cut(s)	108, 423, 662, 670, 1658, 1941, 2034
DpnII	GATC	7 cut(s)	106, 421, 660, 668, 1656, 1939, 2032
DrdI	GACNNNNNNGTC	1 cut(s)	2062
DseDI	GACNNNNNNGTC	1 cut(s)	2062
EciI	GGCGGA	1 cut(s)	1136
Ecl136II	GAGCTC	2 cut(s)	34, 607
Eco130I	CCWWGG	2 cut(s)	27, 876
Eco147I	AGGCCT	3 cut(s)	1701, 1841, 1912
Eco24I	GRGCYC	2 cut(s)	36, 609
Eco47I	GGWCC	2 cut(s)	317, 1228
Eco53kI	GAGCTC	2 cut(s)	34, 607
Eco57I	CTGAAG	7 cut(s)	279, 402, 671, 1040, 1464, 1487, 1563
Eco81I	CCTNAGG	2 cut(s)	483, 1455
Eco88I	CYCGRG	2 cut(s)	709, 1200
Eco91I	GGTNACC	1 cut(s)	1060
EcoICRI	GAGCTC	2 cut(s)	34, 607
EcoNI	CCTNNNNNAGG	1 cut(s)	734
EcoO109I	RGGNCCY	2 cut(s)	317, 1228
EcoO65I	GGTNACC	1 cut(s)	1060
EcoRI	GAATTC	4 cut(s)	430, 718, 1188, 1317
EcoRII	CCWGG	3 cut(s)	143, 451, 664
EcoT14I	CCWWGG	2 cut(s)	27, 876
EcoT38I	GRGCYC	2 cut(s)	36, 609
EgeI	GGCGCC	1 cut(s)	1379
EheI	GGCGCC	1 cut(s)	1379
ErhI	CCWWGG	2 cut(s)	27, 876
FalI	AAGNNNNNCTT	2 cut(s)	1066, 1098
FaqI	GGGAC	2 cut(s)	303, 2060
FauNDI	CATATG	1 cut(s)	1222
FblI	GTMKAC	1 cut(s)	939
FokI	GGATG	7 cut(s)	109, 423, 893, 1280, 1391, 1476, 1701
FriOI	GRGCYC	2 cut(s)	36, 609
FspBI	CTAG	7 cut(s)	137, 188, 783, 1251, 1775, 2138, 2196
GlaI	GCGC	4 cut(s)	278, 1379, 1833, 1890
GsaI	CCCAGC	1 cut(s)	1385
GsuI	CTGGAG	2 cut(s)	20, 1856
HaeII	RGCGCY	3 cut(s)	1381, 1835, 1892
HaeIII	GGCC	6 cut(s)	1343, 1605, 1701, 1841, 1912, 2011
HapII	CCGG	3 cut(s)	1010, 1408, 1672
HgaI	GACGC	3 cut(s)	149, 182, 1289
HhaI	GCGC	4 cut(s)	279, 1380, 1834, 1891
Hin1I	GRCGYC	3 cut(s)	141, 526, 1378
Hin6I	GCGC	4 cut(s)	277, 1378, 1832, 1889
HinP1I	GCGC	4 cut(s)	277, 1378, 1832, 1889
HincII	GTYRAC	1 cut(s)	940
HindII	GTYRAC	1 cut(s)	940
HindIII	AAGCTT	1 cut(s)	261
HpaII	CCGG	3 cut(s)	1010, 1408, 1672
HphI	GGTGA	4 cut(s)	677, 1072, 1745, 2162
Hpy166II	GTNNAC	5 cut(s)	370, 409, 940, 1562, 1805
Hpy8I	GTNNAC	5 cut(s)	370, 409, 940, 1562, 1805
Hpy99I	CGWCG	4 cut(s)	86, 89, 531, 941
HpyAV	CCTTC	8 cut(s)	264, 889, 1068, 1125, 1587, 1691, 1730, 2100
HpyCH4III	ACNGT	4 cut(s)	46, 475, 1510, 1930
HpyCH4IV	ACGT	4 cut(s)	372, 526, 936, 2284
HpySE526I	ACGT	4 cut(s)	372, 526, 936, 2284
Hsp92I	GRCGYC	3 cut(s)	141, 526, 1378
HspAI	GCGC	4 cut(s)	277, 1378, 1832, 1889
KasI	GGCGCC	1 cut(s)	1377
KflI	GGGWCCC	1 cut(s)	317
Kzo9I	GATC	7 cut(s)	106, 421, 660, 668, 1656, 1939, 2032
LmnI	GCTCC	5 cut(s)	31, 39, 212, 613, 1526
MaeI	CTAG	7 cut(s)	137, 188, 783, 1251, 1775, 2138, 2196
MaeII	ACGT	4 cut(s)	372, 526, 936, 2284
MaeIII	GTNAC	3 cut(s)	465, 1060, 1966
MalI	GATC	7 cut(s)	108, 423, 662, 670, 1658, 1941, 2034
MboI	GATC	7 cut(s)	106, 421, 660, 668, 1656, 1939, 2032
MfeI	CAATTG	1 cut(s)	2124
MflI	RGATCY	3 cut(s)	660, 668, 1656
MhlI	GDGCHC	3 cut(s)	36, 609, 699
Mly113I	GGCGCC	1 cut(s)	1378
MlyI	GAGTC	4 cut(s)	1169, 1557, 1616, 2072
MroXI	GAANNNNTTC	2 cut(s)	264, 1078
MseI	TTAA	9 cut(s)	287, 573, 818, 1098, 1233, 1274, 1517, 1676, 1787
MspA1I	CMGCKG	2 cut(s)	743, 1634
MspCI	CTTAAG	2 cut(s)	1232, 1786
MspI	CCGG	3 cut(s)	1010, 1408, 1672
MspR9I	CCNGG	5 cut(s)	145, 453, 666, 1010, 1409
MunI	CAATTG	1 cut(s)	2124
Mva1269I	GAATGC	1 cut(s)	2298
MvaI	CCWGG	3 cut(s)	145, 453, 666
MvnI	CGCG	2 cut(s)	176, 279
NarI	GGCGCC	1 cut(s)	1378
NciI	CCSGG	2 cut(s)	1010, 1409
NcoI	CCATGG	1 cut(s)	27
NdeI	CATATG	1 cut(s)	1222
NdeII	GATC	7 cut(s)	106, 421, 660, 668, 1656, 1939, 2032
NlaIV	GGNNCC	4 cut(s)	318, 319, 662, 1379
NmeAIII	GCCGAG	1 cut(s)	2099
NmuCI	GTSAC	1 cut(s)	1060
NspI	RCATGY	1 cut(s)	2053
PaeR7I	CTCGAG	2 cut(s)	709, 1200
PagI	TCATGA	2 cut(s)	169, 1596
PceI	AGGCCT	3 cut(s)	1701, 1841, 1912
PcsI	WCGNNNNNNNCGW	1 cut(s)	1164
PctI	GAATGC	1 cut(s)	2298
PdmI	GAANNNNTTC	2 cut(s)	264, 1078
Ple19I	CGATCG	1 cut(s)	109
PleI	GAGTC	4 cut(s)	1168, 1557, 1616, 2071
PluTI	GGCGCC	1 cut(s)	1381
PpsI	GAGTC	4 cut(s)	1168, 1557, 1616, 2071
Ppu21I	YACGTR	1 cut(s)	2285
PpuMI	RGGWCCY	2 cut(s)	317, 1228
PsiI	TTATAA	1 cut(s)	2207
Psp124BI	GAGCTC	2 cut(s)	36, 609
Psp5II	RGGWCCY	2 cut(s)	317, 1228
Psp6I	CCWGG	3 cut(s)	143, 451, 664
PspEI	GGTNACC	1 cut(s)	1060
PspFI	CCCAGC	1 cut(s)	1381
PspGI	CCWGG	3 cut(s)	143, 451, 664
PspN4I	GGNNCC	4 cut(s)	318, 319, 662, 1379
PspPI	GGNCC	3 cut(s)	317, 1228, 2010
PspPPI	RGGWCCY	2 cut(s)	317, 1228
PstI	CTGCAG	2 cut(s)	1630, 1639
PstNI	CAGNNNCTG	3 cut(s)	1391, 1634, 1982
PsuI	RGATCY	3 cut(s)	660, 668, 1656
PvuI	CGATCG	1 cut(s)	109
PvuII	CAGCTG	2 cut(s)	743, 1634
RsaI	GTAC	5 cut(s)	231, 369, 981, 1741, 1952
RsaNI	GTAC	5 cut(s)	230, 368, 980, 1740, 1951
SacI	GAGCTC	2 cut(s)	36, 609
SalI	GTCGAC	1 cut(s)	938
SaqAI	TTAA	9 cut(s)	287, 573, 818, 1098, 1233, 1274, 1517, 1676, 1787
Sau3AI	GATC	7 cut(s)	106, 421, 660, 668, 1656, 1939, 2032
Sau96I	GGNCC	3 cut(s)	317, 1228, 2010
SchI	GAGTC	4 cut(s)	1169, 1557, 1616, 2072
ScrFI	CCNGG	5 cut(s)	145, 453, 666, 1010, 1409
SduI	GDGCHC	3 cut(s)	36, 609, 699
SfcI	CTRYAG	3 cut(s)	116, 1626, 1635
SfoI	GGCGCC	1 cut(s)	1379
Sfr274I	CTCGAG	2 cut(s)	709, 1200
SinI	GGWCC	2 cut(s)	317, 1228
SlaI	CTCGAG	2 cut(s)	709, 1200
SmlI	CTYRAG	7 cut(s)	608, 623, 709, 851, 1200, 1232, 1786
SmoI	CTYRAG	7 cut(s)	608, 623, 709, 851, 1200, 1232, 1786
SseBI	AGGCCT	3 cut(s)	1701, 1841, 1912
SsiI	CCGC	6 cut(s)	1147, 1265, 1308, 1344, 1550, 2053
SspDI	GGCGCC	1 cut(s)	1377
SspI	AATATT	1 cut(s)	1016
SspMI	CTAG	7 cut(s)	137, 188, 783, 1251, 1775, 2138, 2196
SstI	GAGCTC	2 cut(s)	36, 609
StuI	AGGCCT	3 cut(s)	1701, 1841, 1912
StyD4I	CCNGG	5 cut(s)	143, 451, 664, 1008, 1407
StyI	CCWWGG	2 cut(s)	27, 876
TaaI	ACNGT	4 cut(s)	46, 475, 1510, 1930
TaiI	ACGT	4 cut(s)	375, 529, 939, 2287
TaqI	TCGA	5 cut(s)	710, 907, 939, 1201, 1779
TatI	WGTACW	2 cut(s)	367, 979
TauI	GCSGC	3 cut(s)	1310, 1346, 1553
Tru1I	TTAA	9 cut(s)	287, 573, 818, 1098, 1233, 1274, 1517, 1676, 1787
Tru9I	TTAA	9 cut(s)	287, 573, 818, 1098, 1233, 1274, 1517, 1676, 1787
TscAI	CASTG	4 cut(s)	49, 1317, 1515, 1731
TseFI	GTSAC	1 cut(s)	1060
Tsp45I	GTSAC	1 cut(s)	1060
TspRI	CASTG	4 cut(s)	49, 1317, 1515, 1731
Vha464I	CTTAAG	2 cut(s)	1232, 1786
VpaK11BI	GGWCC	2 cut(s)	317, 1228
XagI	CCTNNNNNAGG	1 cut(s)	734
XapI	RAATTY	6 cut(s)	430, 718, 1188, 1317, 2251, 2311
XbaI	TCTAGA	2 cut(s)	187, 782
XceI	RCATGY	1 cut(s)	2053
XhoI	CTCGAG	2 cut(s)	709, 1200
XmiI	GTMKAC	1 cut(s)	939
XmnI	GAANNNNTTC	2 cut(s)	264, 1078
XspI	CTAG	7 cut(s)	137, 188, 783, 1251, 1775, 2138, 2196
ZraI	GACGTC	1 cut(s)	527

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.