Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0006614

Physical Location & Seq

Genomic Coordinates Reverse (-)

2108371 .. 2119169

Gene Structure 10799 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ16051

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2883 bp

ATGCTGGACTACCAGATTAGCAAAACCATGGAGCTCCAGAACACTGTGAAAGAAGCCCTAAACGCACTCTACCACCACCCCGACGACGGCGTTCGGATGCAAGCCGATCGCTTTCTACAGGACTTTCAGCGAACCCTAGACGCCTGGCAGGTTGCTGATAACTTGCTTCATGACGCGACCAGCAATCGAGAAACTTTGATATTTTGCTCCCAGACCCTTAGAAGCAAGGTACAACGAGATTTTGAAGAACTACCTTCTGAAGCTTTTCGCCCATTGCGCGATTCCTTAAATAACTTATTGAGAGAGTTCCATAAGGGTCCCCCTAAAGTCAGAACTCAGATTAGCATTGCTGTTGCTGCTTTAGCTGTACACGTTCCTGCTGAAGATTGGGGAGATGGTGGTATAGTGAACTGGCTTCGGGATCAGATGAATTCGCATCCAGAATATATACCTGGATTTTTAGAGTTACTAACAGTTTTGCCTGAGGAAGTATTCAACTACAAGATAGCAGCTCGCCCAGAAAGACGTCGCCAATTTGAGAAAGAGCTTACTTCTCAAATGGAGGTTGCTCTTAACATCTTGACAGCTTGTTTGAATATCAATGAGCTCAAGGAGCAGGTTCTTGAGGCATTTGCTTCTTGGCTTCGGCTGAAGCATGGGATCCCTGGATCTTTGCTTGCATCTCACCCATTGGTGCTCACAGCTCTCTCGAGCTTGAATTCTGAACTCCTTTCAGAGGCAGCTGTAAATGTTATTTCTGAGTTGATACACTATACGACATCTAGAGAATCTGGTGGTGTGCAAGTTCAAATGCCTTTAATTCAAGTCATTGTTCCCCAAGTGATGAATCTCAAGGCACAACTTAGAGATTCTTCCAAGGATGAAGAAGATGTGAAGGCTATTGCTCGATTATTTGCTGACATGGGGGATTCATACGTCGACCTGATTGCAACTGGTTCTGATGAATCAAAATTGATTGTACAAGCATTATTGGAAGTTGCTGCACACCCGGAATATTATATAGCTTCCATGACATTCAATTTTTGGCATAGTCTTCAGGTGACCTTGACAAGAAGGGATTCTTATATCTCGTTGGTTAATGAATCCACCATTGAATCTGAGAAAAATAGAAGGCTGCATATATTCCGCCCTGCTTACGAGTCGCTCGTGTCCTTAGTTAGCTTCCGAATTCAATATCCTCGAGATTATCAAGACCTGTCATATGAGGACCTTAAGGAGTTCAAGCAGACTAGATATGCTGTTGCGGATGTCTTAATTGACGCAGCATCAGTTTTAGGAGGCGATGCCGCACTGAGAATTCTTTACATGAAACTTGATGAGGCCGCAGCCTGCTGTCAGAATGAAGAAAGTGAATGGCGCCCAGCAGAAGCTGCTTTATTTGGCATCCGGGCTATATCAAATTATGTATCAGTAGTTGAAGCTGAAGTAATGCCTAAGGTCATGGGCAGACTTCTAAAACTACCTCAGCATCCCCAACTACTTCAGACAGTGTGCTTAACAATAGGAGCTTATTCAAAATGGCTTGATGCGGCATCTGGTGGACTCTCCATACTGCCTTCAGTTATAGATGTTCTCATGAGTGGCCTTGCTAAATCTGAAGACTCTGCAGCAGCTGCAGCTTTGGCATTTCGGCAGATCTGTGATGATTGCCGGTTAAAGCTCTGTGGATGTTTGGAAGGCCTTTTCCATATATATCACAGGGCAGTGAATGGTGAAGGTACTTTGAAAGTTTGTGCTGAGGATTCATTGCATCTAGTCGAAGCCTTAAGCAAGGTTATTAGTGAACTTCCCCCAGACCAAGCTAAGAGGGCGCTGGAGGCCTTGTGTTTGCCAGTCGTTAGTCCTTTACAGGAAGTTCTTAGCCAAGCGCCAGAGATGCTAAATAACAGGCCTGCTCGTGATTTCACAGTTCATATTGATCGGTTTGGGTACATCTTTAGATATGTAACCCATGCAGAAGCTGTGGCAGATGCAATCCAGAGGCTTTGGCCCATTTTCAAAGCCATCTTTGATCTTCGTGCTTGGGACATGCGGACAATGGAGTCTATTTGCCGAGCTTGCAAATACGCTGTGAGAACTTCTGGAAGGTGCATGGGAACGACAATTGGAGAAATGCTAGAGAAGATTCAAGAATTATATAAACAGCATCACCAACCATGCTTCCTTTATCTCTCTAGTGAAGTTATAAAGATATTTGGCTCAGACCCGTCATGTGCTGATTATTTGAAAAATTTGATTGAATCACTCTTTCAGCACACAACACGTATTCTCACGAGCATTCAAGAATTTACTTCCAGACCAGATATAGCAGATGATTGCTTTCTGCTCGCATCGAGATGCATCCGTTATTGTGCACACTTGTTTATTCCTTCTGCAGCATTTCCAGCATTAGTAGATTGCTCATTGATTGGCATTACAGTTCAACACAGGGAGGCGTCAAATTCAATATTGACCTTCTTATCAGATATCTTTGATCATGCAAACTCTACCGAGGGGGCAAAATACTTACCCATCAGGGATGCTGTAATTATTCCTCGAGGATCCCGCATGACAAGAGTTTTGATTGCTGCATTAACAGGAGCAATTCCAAGCTCTCGCCTAGAAAATGTAACTTACACACTGCTATCACTATCTCGAACATACGGAGCACAGTCGGTGGAGTGGGCCAGGGAGAGTGTTTCATTAATTCCTTTGACGGCTGTGAGAGAGGTTGAGCGTGCAAGATTCTTGCAAGCATTGTCAGATGCTGCAGCTGGGGTTAATGTCAATGCCCTTTCAGTTCCACTCGAGGAGCTATCAGATGTTTGCCGGCGTAACCGTACAGTCATGGAGATCGTTCAAGGAGCTTTGAGGCCTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006606 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0010468 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017038 GO:0019219 GO:0019222 GO:0031090 GO:0031323 GO:0031965 GO:0031967 GO:0031975 GO:0033036 GO:0033218 GO:0033365 GO:0034504 GO:0034613 GO:0042277 GO:0042802 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043484 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050794 GO:0051169 GO:0051170 GO:0051171 GO:0051179 GO:0051234 GO:0051252 GO:0051641 GO:0051649 GO:0060255 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0080090

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBN_N Xpo1

Protein Analysis

960

Amino Acids

107.53

Weight (kDa)

5.59

Isoelectric Point (pI)

42.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Xpo1	PF08389	107 - 252	3.5e-21	Exportin 1-like protein
TPR_TNPO3_IPO13_2nd	PF24138	294 - 361	4.8e-15	Transportin-3/Importin-13 second TPR domain
TPR_TNPO3_IPO13_3rd	PF24140	482 - 571	6.2e-08	Transportin-3/Importin-13 third TPR domain
TPR_TNPO3_IPO13_4th	PF24139	664 - 764	1.2e-18	Transportin-3/Importin-13 fourth TPR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006614)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62600
fragaria_vesca	FvH4_5g16030 FvH4_5g16030 FvH4_5g16030 FvH4_5g16030 FvH4_5g16030 FvH4_5g16030
malus_domestica	MD06G1183500.v1.1 MD14G1189400.v1.1
prunus_persica	Prupe.5G182200_v2.0.a1 Prupe.6G220700_v2.0.a1
pyrus_communis	pycom06g16250 pycom14g15710
rosa_chinensis	RchiOBHm_Chr7g0180041
rosa_laevigata	RLG00000005300
rosa_multiflora	Rmu_co8039046.1_g000001 Rmu_ssc0000119.1_g000007 Rmu_ssc0000119.1_g000020 Rmu_ssc0000119.1_g000024
rosa_roxburghii	Rroxscaffold_3G00273180
rosa_rugosa	Rorug06G0430100
rosa_samantha	Rh7AG030300 Rh7BG030200 Rh7CG032000 Rh7DG031000
rosa_wichuraiana	Rw7G002520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2207
AasI	GACNNNNNNGTC	1 cut(s)	2062
AatII	GACGTC	1 cut(s)	529
AbsI	CCTCGAGG	1 cut(s)	2556
Acc36I	ACCTGC	2 cut(s)	139, 607
AccB1I	GGYRCC	1 cut(s)	1377
AccI	GTMKAC	1 cut(s)	939
AccII	CGCG	2 cut(s)	176, 279
AciI	CCGC	7 cut(s)	1147, 1265, 1308, 1344, 1550, 2053, 2566
AclWI	GGATC	6 cut(s)	429, 655, 668, 676, 2556, 2569
AcsI	RAATTY	7 cut(s)	430, 718, 1188, 1317, 2251, 2306, 2461
AcuI	CTGAAG	8 cut(s)	279, 402, 671, 1040, 1464, 1487, 1563, 1638
AcyI	GRCGYC	4 cut(s)	141, 526, 1378, 2456
AfaI	GTAC	6 cut(s)	231, 369, 981, 1741, 1952, 2842
AfiI	CCNNNNNNNGG	2 cut(s)	86, 736
AflII	CTTAAG	2 cut(s)	1232, 1786
AflIII	ACRYGT	2 cut(s)	370, 2282
AjnI	CCWGG	4 cut(s)	143, 451, 664, 2687
Alw21I	GWGCWC	5 cut(s)	36, 609, 699, 2377, 2671
Alw44I	GTGCAC	1 cut(s)	2373
AlwI	GGATC	6 cut(s)	429, 655, 668, 676, 2556, 2569
AlwNI	CAGNNNCTG	4 cut(s)	1391, 1634, 1982, 2768
Ama87I	CYCGRG	4 cut(s)	709, 1200, 2556, 2807
AoxI	GGCC	8 cut(s)	1341, 1603, 1699, 1839, 1910, 2009, 2685, 2873
ApaLI	GTGCAC	1 cut(s)	2373
ApoI	RAATTY	7 cut(s)	430, 718, 1188, 1317, 2251, 2306, 2461
ArsI	GACNNNNNNTTYG	4 cut(s)	574, 606, 2563, 2595
AseI	ATTAAT	1 cut(s)	2705
Asp700I	GAANNNNTTC	2 cut(s)	264, 1078
AspLEI	GCGC	4 cut(s)	279, 1380, 1834, 1891
AspS9I	GGNCC	4 cut(s)	317, 1228, 2010, 2685
AsuC2I	CCSGG	2 cut(s)	1010, 1409
AsuHPI	GGTGA	4 cut(s)	677, 1072, 1745, 2162
AvaI	CYCGRG	4 cut(s)	709, 1200, 2556, 2807
AvaII	GGWCC	2 cut(s)	317, 1228
AxyI	CCTNAGG	2 cut(s)	483, 1455
BaeGI	GKGCMC	1 cut(s)	2377
BamHI	GGATCC	2 cut(s)	660, 2561
BanI	GGYRCC	1 cut(s)	1377
BanII	GRGCYC	2 cut(s)	36, 609
BauI	CACGAG	3 cut(s)	1166, 1917, 2293
BbsI	GAAGAC	2 cut(s)	1046, 1626
Bbv12I	GWGCWC	5 cut(s)	36, 609, 699, 2377, 2671
BbvCI	CCTCAGC	2 cut(s)	1485, 1758
BccI	CCATC	3 cut(s)	389, 2033, 2540
BceAI	ACGGC	2 cut(s)	103, 2733
BcgI	CGANNNNNNTGC	4 cut(s)	89, 123, 929, 963
BciT130I	CCWGG	4 cut(s)	145, 453, 666, 2689
BclI	TGATCA	1 cut(s)	2494
BcnI	CCSGG	2 cut(s)	1010, 1409
BfaI	CTAG	7 cut(s)	137, 783, 1251, 1775, 2138, 2196, 2621
BfmI	CTRYAG	5 cut(s)	116, 1626, 1635, 2394, 2769
BfoI	RGCGCY	3 cut(s)	1381, 1835, 1892
BfrI	CTTAAG	2 cut(s)	1232, 1786
BfuAI	ACCTGC	2 cut(s)	139, 607
BglII	AGATCT	1 cut(s)	1656
Bme1390I	CCNGG	6 cut(s)	145, 453, 666, 1010, 1409, 2689
Bme18I	GGWCC	2 cut(s)	317, 1228
BmeT110I	CYCGRG	4 cut(s)	709, 1200, 2556, 2807
BmgT120I	GGNCC	4 cut(s)	317, 1228, 2010, 2685
BmiI	GGNNCC	5 cut(s)	318, 319, 662, 1379, 2563
BmrFI	CCNGG	6 cut(s)	145, 453, 666, 1010, 1409, 2689
BpiI	GAAGAC	2 cut(s)	1046, 1626
BpmI	CTGGAG	2 cut(s)	20, 1856
Bpu10I	CCTNAGC	2 cut(s)	1485, 1758
BpuEI	CTTGAG	3 cut(s)	593, 644, 836
BpuMI	CCSGG	2 cut(s)	1010, 1409
BsaAI	YACGTR	1 cut(s)	2285
BsaHI	GRCGYC	4 cut(s)	141, 526, 1378, 2456
BsaJI	CCNNGG	5 cut(s)	27, 664, 876, 2511, 2688
BsaXI	ACNNNNNCTCC	2 cut(s)	1829, 1859
Bsc4I	CCNNNNNNNGG	2 cut(s)	86, 736
Bse118I	RCCGGY	2 cut(s)	1671, 2829
Bse1I	ACTGG	3 cut(s)	416, 958, 1853
Bse21I	CCTNAGG	2 cut(s)	483, 1455
Bse3DI	GCAATG	3 cut(s)	272, 345, 1766
BseBI	CCWGG	4 cut(s)	145, 453, 666, 2689
BseDI	CCNNGG	5 cut(s)	27, 664, 876, 2511, 2688
BseGI	GGATG	9 cut(s)	102, 436, 886, 1273, 1404, 1489, 1694, 2361, 2545
BseLI	CCNNNNNNNGG	2 cut(s)	86, 736
BseMI	GCAATG	3 cut(s)	272, 345, 1766
BseMII	CTCAG	8 cut(s)	350, 474, 750, 1110, 1304, 1499, 1749, 2235
BseNI	ACTGG	3 cut(s)	416, 958, 1853
BseRI	GAGGAG	1 cut(s)	2825
BseSI	GKGCMC	1 cut(s)	2377
BseYI	CCCAGC	2 cut(s)	1381, 2774
BsgI	GTGCAG	1 cut(s)	987
Bsh1236I	CGCG	2 cut(s)	176, 279
Bsh1285I	CGRYCG	1 cut(s)	109
BshFI	GGCC	8 cut(s)	1343, 1605, 1701, 1841, 1912, 2011, 2687, 2875
BshNI	GGYRCC	1 cut(s)	1377
BsiEI	CGRYCG	1 cut(s)	109
BsiHKAI	GWGCWC	5 cut(s)	36, 609, 699, 2377, 2671
BsiHKCI	CYCGRG	4 cut(s)	709, 1200, 2556, 2807
BsiSI	CCGG	4 cut(s)	1010, 1408, 1672, 2830
BslFI	GGGAC	2 cut(s)	303, 2060
BslI	CCNNNNNNNGG	2 cut(s)	86, 736
BsmFI	GGGAC	2 cut(s)	303, 2060
BsmI	GAATGC	1 cut(s)	2298
BsnI	GGCC	8 cut(s)	1343, 1605, 1701, 1841, 1912, 2011, 2687, 2875
BsoBI	CYCGRG	4 cut(s)	709, 1200, 2556, 2807
Bsp1286I	GDGCHC	5 cut(s)	36, 609, 699, 2377, 2671
Bsp1407I	TGTACA	2 cut(s)	367, 979
Bsp19I	CCATGG	1 cut(s)	27
BspACI	CCGC	7 cut(s)	1147, 1265, 1308, 1344, 1550, 2053, 2566
BspANI	GGCC	8 cut(s)	1343, 1605, 1701, 1841, 1912, 2011, 2687, 2875
BspCNI	CTCAG	8 cut(s)	349, 475, 751, 1111, 1305, 1498, 1750, 2234
BspFNI	CGCG	2 cut(s)	176, 279
BspHI	TCATGA	2 cut(s)	169, 1596
BspLI	GGNNCC	5 cut(s)	318, 319, 662, 1379, 2563
BspMAI	CTGCAG	4 cut(s)	1630, 1639, 2398, 2773
BspMI	ACCTGC	2 cut(s)	139, 607
BspPI	GGATC	6 cut(s)	429, 655, 668, 676, 2556, 2569
BspT107I	GGYRCC	1 cut(s)	1377
BspTI	CTTAAG	2 cut(s)	1232, 1786
BsrDI	GCAATG	3 cut(s)	272, 345, 1766
BsrFI	RCCGGY	2 cut(s)	1671, 2829
BsrGI	TGTACA	2 cut(s)	367, 979
BsrI	ACTGG	3 cut(s)	416, 958, 1853
BssAI	RCCGGY	2 cut(s)	1671, 2829
BssECI	CCNNGG	5 cut(s)	27, 664, 876, 2511, 2688
BssNI	GRCGYC	4 cut(s)	141, 526, 1378, 2456
BssSI	CACGAG	3 cut(s)	1166, 1917, 2293
BssT1I	CCWWGG	2 cut(s)	27, 876
Bst2BI	CACGAG	3 cut(s)	1166, 1917, 2293
Bst2UI	CCWGG	4 cut(s)	145, 453, 666, 2689
Bst4CI	ACNGT	8 cut(s)	46, 475, 1510, 1930, 2440, 2673, 2840, 2845
BstACI	GRCGYC	4 cut(s)	141, 526, 1378, 2456
BstAFI	CTTAAG	2 cut(s)	1232, 1786
BstAPI	GCANNNNNTGC	2 cut(s)	1391, 1634
BstAUI	TGTACA	2 cut(s)	367, 979
BstBAI	YACGTR	1 cut(s)	2285
BstDSI	CCRYGG	1 cut(s)	27
BstEII	GGTNACC	1 cut(s)	1060
BstENI	CCTNNNNNAGG	1 cut(s)	734
BstF5I	GGATG	9 cut(s)	102, 436, 886, 1273, 1404, 1489, 1694, 2361, 2545
BstFNI	CGCG	2 cut(s)	176, 279
BstH2I	RGCGCY	3 cut(s)	1381, 1835, 1892
BstHHI	GCGC	4 cut(s)	279, 1380, 1834, 1891
BstMCI	CGRYCG	1 cut(s)	109
BstNI	CCWGG	4 cut(s)	145, 453, 666, 2689
BstNSI	RCATGY	1 cut(s)	2053
BstPI	GGTNACC	1 cut(s)	1060
BstSCI	CCNGG	6 cut(s)	143, 451, 664, 1008, 1407, 2687
BstSFI	CTRYAG	5 cut(s)	116, 1626, 1635, 2394, 2769
BstSLI	GKGCMC	1 cut(s)	2377
BstUI	CGCG	2 cut(s)	176, 279
BstV2I	GAAGAC	2 cut(s)	1046, 1626
BstX2I	RGATCY	4 cut(s)	660, 668, 1656, 2561
BstYI	RGATCY	4 cut(s)	660, 668, 1656, 2561
Bsu36I	CCTNAGG	2 cut(s)	483, 1455
BsuRI	GGCC	8 cut(s)	1343, 1605, 1701, 1841, 1912, 2011, 2687, 2875
BtgI	CCRYGG	1 cut(s)	27
BtgZI	GCGATG	1 cut(s)	1317
BtsCI	GGATG	9 cut(s)	102, 436, 886, 1273, 1404, 1489, 1694, 2361, 2545
BtsI	GCAGTG	2 cut(s)	1731, 2639
BtsIMutI	CAGTG	5 cut(s)	42, 1310, 1515, 1731, 2639
BveI	ACCTGC	2 cut(s)	139, 607
CaiI	CAGNNNCTG	4 cut(s)	1391, 1634, 1982, 2768
CciI	TCATGA	2 cut(s)	169, 1596
CfoI	GCGC	4 cut(s)	279, 1380, 1834, 1891
Cfr10I	RCCGGY	2 cut(s)	1671, 2829
Cfr13I	GGNCC	4 cut(s)	317, 1228, 2010, 2685
CseI	GACGC	4 cut(s)	149, 182, 1289, 2445
Csp6I	GTAC	6 cut(s)	230, 368, 980, 1740, 1951, 2841
CviQI	GTAC	6 cut(s)	230, 368, 980, 1740, 1951, 2841
DinI	GGCGCC	1 cut(s)	1379
DrdI	GACNNNNNNGTC	1 cut(s)	2062
DseDI	GACNNNNNNGTC	1 cut(s)	2062
EciI	GGCGGA	1 cut(s)	1136
Ecl136II	GAGCTC	2 cut(s)	34, 607
Eco130I	CCWWGG	2 cut(s)	27, 876
Eco147I	AGGCCT	4 cut(s)	1701, 1841, 1912, 2875
Eco24I	GRGCYC	2 cut(s)	36, 609
Eco32I	GATATC	1 cut(s)	2488
Eco47I	GGWCC	2 cut(s)	317, 1228
Eco53kI	GAGCTC	2 cut(s)	34, 607
Eco57I	CTGAAG	8 cut(s)	279, 402, 671, 1040, 1464, 1487, 1563, 1638
Eco81I	CCTNAGG	2 cut(s)	483, 1455
Eco88I	CYCGRG	4 cut(s)	709, 1200, 2556, 2807
Eco91I	GGTNACC	1 cut(s)	1060
EcoICRI	GAGCTC	2 cut(s)	34, 607
EcoNI	CCTNNNNNAGG	1 cut(s)	734
EcoO109I	RGGNCCY	2 cut(s)	317, 1228
EcoO65I	GGTNACC	1 cut(s)	1060
EcoRI	GAATTC	4 cut(s)	430, 718, 1188, 1317
EcoRII	CCWGG	4 cut(s)	143, 451, 664, 2687
EcoRV	GATATC	1 cut(s)	2488
EcoT14I	CCWWGG	2 cut(s)	27, 876
EcoT22I	ATGCAT	1 cut(s)	2363
EcoT38I	GRGCYC	2 cut(s)	36, 609
EgeI	GGCGCC	1 cut(s)	1379
EheI	GGCGCC	1 cut(s)	1379
ErhI	CCWWGG	2 cut(s)	27, 876
FalI	AAGNNNNNCTT	2 cut(s)	1066, 1098
FaqI	GGGAC	2 cut(s)	303, 2060
FauI	CCCGC	1 cut(s)	2573
FauNDI	CATATG	1 cut(s)	1222
FbaI	TGATCA	1 cut(s)	2494
FblI	GTMKAC	1 cut(s)	939
FokI	GGATG	9 cut(s)	109, 423, 893, 1280, 1391, 1476, 1701, 2348, 2552
FriOI	GRGCYC	2 cut(s)	36, 609
FspBI	CTAG	7 cut(s)	137, 783, 1251, 1775, 2138, 2196, 2621
GlaI	GCGC	4 cut(s)	278, 1379, 1833, 1890
GsaI	CCCAGC	2 cut(s)	1385, 2778
GsuI	CTGGAG	2 cut(s)	20, 1856
HaeII	RGCGCY	3 cut(s)	1381, 1835, 1892
HaeIII	GGCC	8 cut(s)	1343, 1605, 1701, 1841, 1912, 2011, 2687, 2875
HapII	CCGG	4 cut(s)	1010, 1408, 1672, 2830
HgaI	GACGC	4 cut(s)	149, 182, 1289, 2445
HhaI	GCGC	4 cut(s)	279, 1380, 1834, 1891
Hin1I	GRCGYC	4 cut(s)	141, 526, 1378, 2456
Hin6I	GCGC	4 cut(s)	277, 1378, 1832, 1889
HinP1I	GCGC	4 cut(s)	277, 1378, 1832, 1889
HincII	GTYRAC	1 cut(s)	940
HindII	GTYRAC	1 cut(s)	940
HindIII	AAGCTT	1 cut(s)	261
HpaII	CCGG	4 cut(s)	1010, 1408, 1672, 2830
HphI	GGTGA	4 cut(s)	677, 1072, 1745, 2162
Hpy166II	GTNNAC	6 cut(s)	370, 409, 940, 1562, 1805, 2375
Hpy8I	GTNNAC	6 cut(s)	370, 409, 940, 1562, 1805, 2375
Hpy99I	CGWCG	4 cut(s)	86, 89, 531, 941
HpyCH4III	ACNGT	8 cut(s)	46, 475, 1510, 1930, 2440, 2673, 2840, 2845
HpyCH4IV	ACGT	4 cut(s)	372, 526, 936, 2284
HpySE526I	ACGT	4 cut(s)	372, 526, 936, 2284
Hsp92I	GRCGYC	4 cut(s)	141, 526, 1378, 2456
HspAI	GCGC	4 cut(s)	277, 1378, 1832, 1889
KasI	GGCGCC	1 cut(s)	1377
KflI	GGGWCCC	1 cut(s)	317
KroI	GCCGGC	1 cut(s)	2829
KroNI	GCCGGC	1 cut(s)	2831
Ksp22I	TGATCA	1 cut(s)	2494
LmnI	GCTCC	9 cut(s)	31, 39, 212, 613, 1526, 2600, 2666, 2812, 2864
MaeI	CTAG	7 cut(s)	137, 783, 1251, 1775, 2138, 2196, 2621
MaeII	ACGT	4 cut(s)	372, 526, 936, 2284
MaeIII	GTNAC	5 cut(s)	465, 1060, 1966, 2629, 2834
MfeI	CAATTG	1 cut(s)	2124
MflI	RGATCY	4 cut(s)	660, 668, 1656, 2561
MhlI	GDGCHC	5 cut(s)	36, 609, 699, 2377, 2671
Mly113I	GGCGCC	1 cut(s)	1378
MlyI	GAGTC	4 cut(s)	1169, 1557, 1616, 2072
Mph1103I	ATGCAT	1 cut(s)	2363
MroNI	GCCGGC	1 cut(s)	2829
MroXI	GAANNNNTTC	2 cut(s)	264, 1078
MslI	CAYNNNNRTG	1 cut(s)	2356
MspA1I	CMGCKG	3 cut(s)	743, 1634, 2774
MspCI	CTTAAG	2 cut(s)	1232, 1786
MspI	CCGG	4 cut(s)	1010, 1408, 1672, 2830
MspR9I	CCNGG	6 cut(s)	145, 453, 666, 1010, 1409, 2689
MunI	CAATTG	1 cut(s)	2124
Mva1269I	GAATGC	1 cut(s)	2298
MvaI	CCWGG	4 cut(s)	145, 453, 666, 2689
MvnI	CGCG	2 cut(s)	176, 279
NaeI	GCCGGC	1 cut(s)	2831
NarI	GGCGCC	1 cut(s)	1378
NciI	CCSGG	2 cut(s)	1010, 1409
NcoI	CCATGG	1 cut(s)	27
NdeI	CATATG	1 cut(s)	1222
NgoMIV	GCCGGC	1 cut(s)	2829
NlaIV	GGNNCC	5 cut(s)	318, 319, 662, 1379, 2563
NmeAIII	GCCGAG	1 cut(s)	2099
NmuCI	GTSAC	1 cut(s)	1060
NsiI	ATGCAT	1 cut(s)	2363
NspI	RCATGY	1 cut(s)	2053
PaeR7I	CTCGAG	4 cut(s)	709, 1200, 2556, 2807
PagI	TCATGA	2 cut(s)	169, 1596
PceI	AGGCCT	4 cut(s)	1701, 1841, 1912, 2875
PcsI	WCGNNNNNNNCGW	1 cut(s)	1164
PctI	GAATGC	1 cut(s)	2298
PdiI	GCCGGC	1 cut(s)	2831
PdmI	GAANNNNTTC	2 cut(s)	264, 1078
Ple19I	CGATCG	1 cut(s)	109
PleI	GAGTC	4 cut(s)	1168, 1557, 1616, 2071
PluTI	GGCGCC	1 cut(s)	1381
PpsI	GAGTC	4 cut(s)	1168, 1557, 1616, 2071
Ppu21I	YACGTR	1 cut(s)	2285
PpuMI	RGGWCCY	2 cut(s)	317, 1228
PshBI	ATTAAT	1 cut(s)	2705
PsiI	TTATAA	1 cut(s)	2207
Psp124BI	GAGCTC	2 cut(s)	36, 609
Psp5II	RGGWCCY	2 cut(s)	317, 1228
Psp6I	CCWGG	4 cut(s)	143, 451, 664, 2687
PspEI	GGTNACC	1 cut(s)	1060
PspFI	CCCAGC	2 cut(s)	1381, 2774
PspGI	CCWGG	4 cut(s)	143, 451, 664, 2687
PspN4I	GGNNCC	5 cut(s)	318, 319, 662, 1379, 2563
PspPI	GGNCC	4 cut(s)	317, 1228, 2010, 2685
PspPPI	RGGWCCY	2 cut(s)	317, 1228
PspXI	VCTCGAGB	2 cut(s)	2556, 2807
PstI	CTGCAG	4 cut(s)	1630, 1639, 2398, 2773
PstNI	CAGNNNCTG	4 cut(s)	1391, 1634, 1982, 2768
PsuI	RGATCY	4 cut(s)	660, 668, 1656, 2561
PvuI	CGATCG	1 cut(s)	109
PvuII	CAGCTG	3 cut(s)	743, 1634, 2774
RsaI	GTAC	6 cut(s)	231, 369, 981, 1741, 1952, 2842
RsaNI	GTAC	6 cut(s)	230, 368, 980, 1740, 1951, 2841
RseI	CAYNNNNRTG	1 cut(s)	2356
SacI	GAGCTC	2 cut(s)	36, 609
SalI	GTCGAC	1 cut(s)	938
Sau96I	GGNCC	4 cut(s)	317, 1228, 2010, 2685
SchI	GAGTC	4 cut(s)	1169, 1557, 1616, 2072
ScrFI	CCNGG	6 cut(s)	145, 453, 666, 1010, 1409, 2689
SduI	GDGCHC	5 cut(s)	36, 609, 699, 2377, 2671
SfcI	CTRYAG	5 cut(s)	116, 1626, 1635, 2394, 2769
SfoI	GGCGCC	1 cut(s)	1379
Sfr274I	CTCGAG	4 cut(s)	709, 1200, 2556, 2807
SinI	GGWCC	2 cut(s)	317, 1228
SlaI	CTCGAG	4 cut(s)	709, 1200, 2556, 2807
SmiMI	CAYNNNNRTG	1 cut(s)	2356
SmlI	CTYRAG	9 cut(s)	608, 623, 709, 851, 1200, 1232, 1786, 2556, 2807
SmoI	CTYRAG	9 cut(s)	608, 623, 709, 851, 1200, 1232, 1786, 2556, 2807
SseBI	AGGCCT	4 cut(s)	1701, 1841, 1912, 2875
SsiI	CCGC	7 cut(s)	1147, 1265, 1308, 1344, 1550, 2053, 2566
SspDI	GGCGCC	1 cut(s)	1377
SspI	AATATT	2 cut(s)	1016, 2469
SspMI	CTAG	7 cut(s)	137, 783, 1251, 1775, 2138, 2196, 2621
SstI	GAGCTC	2 cut(s)	36, 609
StuI	AGGCCT	4 cut(s)	1701, 1841, 1912, 2875
StyD4I	CCNGG	6 cut(s)	143, 451, 664, 1008, 1407, 2687
StyI	CCWWGG	2 cut(s)	27, 876
TaaI	ACNGT	8 cut(s)	46, 475, 1510, 1930, 2440, 2673, 2840, 2845
TaiI	ACGT	4 cut(s)	375, 529, 939, 2287
TatI	WGTACW	2 cut(s)	367, 979
TauI	GCSGC	3 cut(s)	1310, 1346, 1553
TscAI	CASTG	5 cut(s)	49, 1317, 1515, 1731, 2646
TseFI	GTSAC	1 cut(s)	1060
Tsp45I	GTSAC	1 cut(s)	1060
TspGWI	ACGGA	2 cut(s)	2354, 2679
TspRI	CASTG	5 cut(s)	49, 1317, 1515, 1731, 2646
Vha464I	CTTAAG	2 cut(s)	1232, 1786
VneI	GTGCAC	1 cut(s)	2373
VpaK11BI	GGWCC	2 cut(s)	317, 1228
VspI	ATTAAT	1 cut(s)	2705
XagI	CCTNNNNNAGG	1 cut(s)	734
XapI	RAATTY	7 cut(s)	430, 718, 1188, 1317, 2251, 2306, 2461
XbaI	TCTAGA	1 cut(s)	782
XceI	RCATGY	1 cut(s)	2053
XhoI	CTCGAG	4 cut(s)	709, 1200, 2556, 2807
XmiI	GTMKAC	1 cut(s)	939
XmnI	GAANNNNTTC	2 cut(s)	264, 1078
XspI	CTAG	7 cut(s)	137, 783, 1251, 1775, 2138, 2196, 2621
ZraI	GACGTC	1 cut(s)	527
Zsp2I	ATGCAT	1 cut(s)	2363

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.