Regulator of Vps4 activity in the MVB pathway
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g06910 FvH4_1g06910 FvH4_1g06910 |
| malus_domestica | MD02G1073500.v1.1 MD15G1202900.v1.1 |
| prunus_persica | Prupe.7G214200_v2.0.a1 Prupe.7G214200_v2.0.a1 |
| pyrus_communis | pycom02g05790 pycom15g18020 |
| rosa_chinensis | RchiOBHm_Chr2g0092801 RchiOBHm_Chr2g0092861 |
| rosa_laevigata | RLG00000016336 |
| rosa_multiflora | Rmu_sc0003262.1_g000014 |
| rosa_roxburghii | Rroxscaffold_2G00148810 |
| rosa_rugosa | Rorug02G0029300 Rorug02G0029400 |
| rosa_samantha | Rh2AG075200 Rh2CG078300 Rh2CG078800 Rh2DG073200 Rh2DG073600 Rh2DG073800 |
| rosa_wichuraiana | Rw2G007080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 3118 |
| Acc36I | ACCTGC | 1 cut(s) | 576 |
| AccB1I | GGYRCC | 1 cut(s) | 643 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 130, 2020 |
| AccI | GTMKAC | 2 cut(s) | 458, 3049 |
| AccII | CGCG | 1 cut(s) | 748 |
| AccIII | TCCGGA | 1 cut(s) | 2223 |
| AciI | CCGC | 5 cut(s) | 24, 358, 436, 746, 990 |
| AclI | AACGTT | 1 cut(s) | 3025 |
| AclWI | GGATC | 3 cut(s) | 527, 540, 1706 |
| AcoI | YGGCCR | 2 cut(s) | 675, 2572 |
| AcsI | RAATTY | 3 cut(s) | 1936, 2260, 2746 |
| AcvI | CACGTG | 1 cut(s) | 3104 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 130, 425, 704, 1319, 2020, 2230, 2315, 2367, 3508 |
| AflII | CTTAAG | 1 cut(s) | 2767 |
| AflIII | ACRYGT | 3 cut(s) | 172, 1908, 3103 |
| AjiI | CACGTC | 1 cut(s) | 1911 |
| AjnI | CCWGG | 3 cut(s) | 703, 934, 2013 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3503, 3535 |
| Alw21I | GWGCWC | 3 cut(s) | 2375, 3020, 3443 |
| Alw26I | GTCTC | 7 cut(s) | 400, 1237, 2512, 2605, 2878, 3104, 3306 |
| AlwI | GGATC | 3 cut(s) | 527, 540, 1706 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1013, 1112 |
| Ama87I | CYCGRG | 1 cut(s) | 1063 |
| Aor13HI | TCCGGA | 1 cut(s) | 2223 |
| AoxI | GGCC | 9 cut(s) | 120, 475, 675, 1876, 2196, 2218, 2351, 2572, 3200 |
| ApoI | RAATTY | 3 cut(s) | 1936, 2260, 2746 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 1585, 1600, 2670, 2683, 2818, 3478 |
| AspLEI | GCGC | 3 cut(s) | 265, 417, 750 |
| AspS9I | GGNCC | 9 cut(s) | 121, 476, 578, 707, 1467, 1877, 2351, 3201, 3400 |
| AsuC2I | CCSGG | 3 cut(s) | 419, 2362, 2935 |
| AsuII | TTCGAA | 1 cut(s) | 3452 |
| AvaI | CYCGRG | 1 cut(s) | 1063 |
| AvaII | GGWCC | 4 cut(s) | 578, 707, 1467, 3400 |
| AxyI | CCTNAGG | 2 cut(s) | 537, 3205 |
| BaeGI | GKGCMC | 1 cut(s) | 2273 |
| BalI | TGGCCA | 2 cut(s) | 677, 2574 |
| BamHI | GGATCC | 1 cut(s) | 532 |
| BanI | GGYRCC | 1 cut(s) | 643 |
| BanII | GRGCYC | 1 cut(s) | 3020 |
| BbrPI | CACGTG | 1 cut(s) | 3104 |
| BbsI | GAAGAC | 6 cut(s) | 570, 2234, 2936, 3090, 3279, 3320 |
| Bbv12I | GWGCWC | 3 cut(s) | 2375, 3020, 3443 |
| BbvCI | CCTCAGC | 1 cut(s) | 2661 |
| BceAI | ACGGC | 3 cut(s) | 38, 54, 1525 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 218, 252, 1044, 1078, 1264, 1298, 1965, 1999 |
| BciT130I | CCWGG | 3 cut(s) | 705, 936, 2015 |
| BclI | TGATCA | 3 cut(s) | 721, 910, 1387 |
| BcnI | CCSGG | 3 cut(s) | 419, 2362, 2935 |
| BcoDI | GTCTC | 7 cut(s) | 400, 1237, 2512, 2605, 2878, 3104, 3306 |
| BfmI | CTRYAG | 5 cut(s) | 399, 996, 1053, 1821, 2889 |
| BfrI | CTTAAG | 1 cut(s) | 2767 |
| BfuAI | ACCTGC | 1 cut(s) | 576 |
| BglII | AGATCT | 3 cut(s) | 1331, 1438, 2668 |
| Bme1390I | CCNGG | 6 cut(s) | 419, 705, 936, 2015, 2362, 2935 |
| Bme18I | GGWCC | 4 cut(s) | 578, 707, 1467, 3400 |
| BmeT110I | CYCGRG | 1 cut(s) | 1063 |
| BmgBI | CACGTC | 1 cut(s) | 1911 |
| BmgT120I | GGNCC | 9 cut(s) | 121, 476, 578, 707, 1467, 1877, 2351, 3201, 3400 |
| BmiI | GGNNCC | 5 cut(s) | 534, 645, 696, 1469, 3401 |
| BmrFI | CCNGG | 6 cut(s) | 419, 705, 936, 2015, 2362, 2935 |
| BmrI | ACTGGG | 2 cut(s) | 594, 2064 |
| BmuI | ACTGGG | 2 cut(s) | 594, 2064 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2942 |
| BpiI | GAAGAC | 6 cut(s) | 570, 2234, 2936, 3090, 3279, 3320 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 380, 412 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2661, 3495 |
| Bpu14I | TTCGAA | 1 cut(s) | 3452 |
| BpuEI | CTTGAG | 4 cut(s) | 723, 1504, 2283, 3524 |
| BpuMI | CCSGG | 3 cut(s) | 419, 2362, 2935 |
| BsaAI | YACGTR | 1 cut(s) | 3104 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1998 |
| BsaI | GGTCTC | 3 cut(s) | 2512, 2878, 3306 |
| BsaJI | CCNNGG | 7 cut(s) | 703, 935, 1715, 2014, 2121, 2605, 2795 |
| BsaWI | WCCGGW | 2 cut(s) | 9, 2223 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2767, 2797 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 130, 425, 704, 1319, 2020, 2230, 2315, 2367, 3508 |
| Bse21I | CCTNAGG | 2 cut(s) | 537, 3205 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1998 |
| BseAI | TCCGGA | 1 cut(s) | 2223 |
| BseBI | CCWGG | 3 cut(s) | 705, 936, 2015 |
| BseDI | CCNNGG | 7 cut(s) | 703, 935, 1715, 2014, 2121, 2605, 2795 |
| BseJI | GATNNNNATC | 1 cut(s) | 1998 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 130, 425, 704, 1319, 2020, 2230, 2315, 2367, 3508 |
| BseMII | CTCAG | 8 cut(s) | 528, 1293, 1581, 1995, 2052, 2652, 3033, 3219 |
| BseRI | GAGGAG | 4 cut(s) | 1663, 1910, 1913, 3369 |
| BseSI | GKGCMC | 1 cut(s) | 2273 |
| BsgI | GTGCAG | 1 cut(s) | 1805 |
| Bsh1236I | CGCG | 1 cut(s) | 748 |
| BshFI | GGCC | 9 cut(s) | 122, 477, 677, 1878, 2198, 2220, 2353, 2574, 3202 |
| BshNI | GGYRCC | 1 cut(s) | 643 |
| BsiHKAI | GWGCWC | 3 cut(s) | 2375, 3020, 3443 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1063 |
| BsiSI | CCGG | 5 cut(s) | 10, 419, 2224, 2362, 2934 |
| BslFI | GGGAC | 6 cut(s) | 1453, 1662, 2332, 2950, 2989, 3413 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 130, 425, 704, 1319, 2020, 2230, 2315, 2367, 3508 |
| BsmAI | GTCTC | 7 cut(s) | 400, 1237, 2512, 2605, 2878, 3104, 3306 |
| BsmFI | GGGAC | 6 cut(s) | 1453, 1662, 2332, 2950, 2989, 3413 |
| BsmI | GAATGC | 1 cut(s) | 802 |
| BsnI | GGCC | 9 cut(s) | 122, 477, 677, 1878, 2198, 2220, 2353, 2574, 3202 |
| Bso31I | GGTCTC | 3 cut(s) | 2512, 2878, 3306 |
| BsoBI | CYCGRG | 1 cut(s) | 1063 |
| Bsp119I | TTCGAA | 1 cut(s) | 3452 |
| Bsp1286I | GDGCHC | 4 cut(s) | 2273, 2375, 3020, 3443 |
| Bsp13I | TCCGGA | 1 cut(s) | 2223 |
| Bsp1407I | TGTACA | 2 cut(s) | 1996, 2490 |
| BspACI | CCGC | 5 cut(s) | 24, 358, 436, 746, 990 |
| BspANI | GGCC | 9 cut(s) | 122, 477, 677, 1878, 2198, 2220, 2353, 2574, 3202 |
| BspCNI | CTCAG | 8 cut(s) | 529, 1294, 1582, 1996, 2051, 2653, 3032, 3218 |
| BspEI | TCCGGA | 1 cut(s) | 2223 |
| BspFNI | CGCG | 1 cut(s) | 748 |
| BspHI | TCATGA | 2 cut(s) | 631, 787 |
| BspLI | GGNNCC | 5 cut(s) | 534, 645, 696, 1469, 3401 |
| BspMAI | CTGCAG | 3 cut(s) | 403, 1000, 1057 |
| BspMI | ACCTGC | 1 cut(s) | 576 |
| BspPI | GGATC | 3 cut(s) | 527, 540, 1706 |
| BspT104I | TTCGAA | 1 cut(s) | 3452 |
| BspT107I | GGYRCC | 1 cut(s) | 643 |
| BspTI | CTTAAG | 1 cut(s) | 2767 |
| BspTNI | GGTCTC | 3 cut(s) | 2512, 2878, 3306 |
| BsrGI | TGTACA | 2 cut(s) | 1996, 2490 |
| BssECI | CCNNGG | 7 cut(s) | 703, 935, 1715, 2014, 2121, 2605, 2795 |
| BssT1I | CCWWGG | 4 cut(s) | 1715, 2121, 2605, 2795 |
| Bst2UI | CCWGG | 3 cut(s) | 705, 936, 2015 |
| Bst4CI | ACNGT | 9 cut(s) | 1220, 1248, 1825, 1892, 2030, 2143, 2153, 2547, 2779 |
| Bst6I | CTCTTC | 8 cut(s) | 180, 543, 1235, 2515, 2743, 2965, 3220, 3466 |
| BstAFI | CTTAAG | 1 cut(s) | 2767 |
| BstAUI | TGTACA | 2 cut(s) | 1996, 2490 |
| BstBAI | YACGTR | 1 cut(s) | 3104 |
| BstBI | TTCGAA | 1 cut(s) | 3452 |
| BstFNI | CGCG | 1 cut(s) | 748 |
| BstHHI | GCGC | 3 cut(s) | 265, 417, 750 |
| BstMAI | GTCTC | 7 cut(s) | 400, 1237, 2512, 2605, 2878, 3104, 3306 |
| BstNI | CCWGG | 3 cut(s) | 705, 936, 2015 |
| BstNSI | RCATGY | 5 cut(s) | 176, 442, 598, 929, 1274 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2942 |
| BstSCI | CCNGG | 6 cut(s) | 417, 703, 934, 2013, 2360, 2933 |
| BstSFI | CTRYAG | 5 cut(s) | 399, 996, 1053, 1821, 2889 |
| BstSLI | GKGCMC | 1 cut(s) | 2273 |
| BstUI | CGCG | 1 cut(s) | 748 |
| BstV2I | GAAGAC | 6 cut(s) | 570, 2234, 2936, 3090, 3279, 3320 |
| BstX2I | RGATCY | 5 cut(s) | 532, 1331, 1438, 1711, 2668 |
| BstYI | RGATCY | 5 cut(s) | 532, 1331, 1438, 1711, 2668 |
| Bsu36I | CCTNAGG | 2 cut(s) | 537, 3205 |
| BsuRI | GGCC | 9 cut(s) | 122, 477, 677, 1878, 2198, 2220, 2353, 2574, 3202 |
| BtrI | CACGTC | 1 cut(s) | 1911 |
| BtsI | GCAGTG | 1 cut(s) | 2271 |
| BtsIMutI | CAGTG | 9 cut(s) | 1788, 1897, 2148, 2158, 2271, 2841, 2979, 3441, 3474 |
| BveI | ACCTGC | 1 cut(s) | 576 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1013, 1112 |
| CciI | TCATGA | 2 cut(s) | 631, 787 |
| CfoI | GCGC | 3 cut(s) | 265, 417, 750 |
| Cfr13I | GGNCC | 9 cut(s) | 121, 476, 578, 707, 1467, 1877, 2351, 3201, 3400 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2677, 2712 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3118 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3118 |
| EaeI | YGGCCR | 2 cut(s) | 675, 2572 |
| Eam1104I | CTCTTC | 8 cut(s) | 180, 543, 1235, 2515, 2743, 2965, 3220, 3466 |
| EarI | CTCTTC | 8 cut(s) | 180, 543, 1235, 2515, 2743, 2965, 3220, 3466 |
| Ecl136II | GAGCTC | 1 cut(s) | 3018 |
| Eco130I | CCWWGG | 4 cut(s) | 1715, 2121, 2605, 2795 |
| Eco24I | GRGCYC | 1 cut(s) | 3020 |
| Eco31I | GGTCTC | 3 cut(s) | 2512, 2878, 3306 |
| Eco32I | GATATC | 1 cut(s) | 355 |
| Eco47I | GGWCC | 4 cut(s) | 578, 707, 1467, 3400 |
| Eco53kI | GAGCTC | 1 cut(s) | 3018 |
| Eco72I | CACGTG | 1 cut(s) | 3104 |
| Eco81I | CCTNAGG | 2 cut(s) | 537, 3205 |
| Eco88I | CYCGRG | 1 cut(s) | 1063 |
| EcoICRI | GAGCTC | 1 cut(s) | 3018 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1467, 3201 |
| EcoRI | GAATTC | 1 cut(s) | 2260 |
| EcoRII | CCWGG | 3 cut(s) | 703, 934, 2013 |
| EcoRV | GATATC | 1 cut(s) | 355 |
| EcoT14I | CCWWGG | 4 cut(s) | 1715, 2121, 2605, 2795 |
| EcoT22I | ATGCAT | 3 cut(s) | 927, 931, 1272 |
| EcoT38I | GRGCYC | 1 cut(s) | 3020 |
| ErhI | CCWWGG | 4 cut(s) | 1715, 2121, 2605, 2795 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2944, 2976 |
| FaqI | GGGAC | 6 cut(s) | 1453, 1662, 2332, 2950, 2989, 3413 |
| FauI | CCCGC | 1 cut(s) | 31 |
| FauNDI | CATATG | 2 cut(s) | 544, 2337 |
| FbaI | TGATCA | 3 cut(s) | 721, 910, 1387 |
| FblI | GTMKAC | 2 cut(s) | 458, 3049 |
| FriOI | GRGCYC | 1 cut(s) | 3020 |
| GlaI | GCGC | 3 cut(s) | 264, 416, 749 |
| HaeIII | GGCC | 9 cut(s) | 122, 477, 677, 1878, 2198, 2220, 2353, 2574, 3202 |
| HapII | CCGG | 5 cut(s) | 10, 419, 2224, 2362, 2934 |
| HhaI | GCGC | 3 cut(s) | 265, 417, 750 |
| Hin6I | GCGC | 3 cut(s) | 263, 415, 748 |
| HinP1I | GCGC | 3 cut(s) | 263, 415, 748 |
| HindIII | AAGCTT | 1 cut(s) | 47 |
| HpaII | CCGG | 5 cut(s) | 10, 419, 2224, 2362, 2934 |
| Hpy166II | GTNNAC | 6 cut(s) | 459, 710, 2078, 2711, 3050, 3490 |
| Hpy8I | GTNNAC | 6 cut(s) | 459, 710, 2078, 2711, 3050, 3490 |
| Hpy99I | CGWCG | 1 cut(s) | 955 |
| HpyCH4III | ACNGT | 9 cut(s) | 1220, 1248, 1825, 1892, 2030, 2143, 2153, 2547, 2779 |
| HpyCH4IV | ACGT | 5 cut(s) | 336, 1771, 1910, 3025, 3103 |
| HpySE526I | ACGT | 5 cut(s) | 336, 1771, 1910, 3025, 3103 |
| HspAI | GCGC | 3 cut(s) | 263, 415, 748 |
| Kpn2I | TCCGGA | 1 cut(s) | 2223 |
| Ksp22I | TGATCA | 3 cut(s) | 721, 910, 1387 |
| LmnI | GCTCC | 8 cut(s) | 12, 619, 733, 2370, 2428, 2788, 3073, 3504 |
| MaeII | ACGT | 5 cut(s) | 336, 1771, 1910, 3025, 3103 |
| MaeIII | GTNAC | 9 cut(s) | 1097, 1194, 1214, 1499, 1855, 2060, 2293, 2410, 2547 |
| MfeI | CAATTG | 5 cut(s) | 279, 504, 1575, 2694, 3123 |
| MflI | RGATCY | 5 cut(s) | 532, 1331, 1438, 1711, 2668 |
| MhlI | GDGCHC | 4 cut(s) | 2273, 2375, 3020, 3443 |
| MlsI | TGGCCA | 2 cut(s) | 677, 2574 |
| MluNI | TGGCCA | 2 cut(s) | 677, 2574 |
| MlyI | GAGTC | 1 cut(s) | 3500 |
| MmeI | TCCRAC | 1 cut(s) | 1884 |
| Mox20I | TGGCCA | 2 cut(s) | 677, 2574 |
| Mph1103I | ATGCAT | 3 cut(s) | 927, 931, 1272 |
| MroI | TCCGGA | 1 cut(s) | 2223 |
| MroXI | GAANNNNTTC | 6 cut(s) | 1585, 1600, 2670, 2683, 2818, 3478 |
| MscI | TGGCCA | 2 cut(s) | 677, 2574 |
| MseI | TTAA | 7 cut(s) | 443, 525, 981, 1137, 1934, 2640, 2768 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1275 |
| Msp20I | TGGCCA | 2 cut(s) | 677, 2574 |
| MspA1I | CMGCKG | 3 cut(s) | 404, 1010, 1052 |
| MspCI | CTTAAG | 1 cut(s) | 2767 |
| MspI | CCGG | 5 cut(s) | 10, 419, 2224, 2362, 2934 |
| MspR9I | CCNGG | 6 cut(s) | 419, 705, 936, 2015, 2362, 2935 |
| MunI | CAATTG | 5 cut(s) | 279, 504, 1575, 2694, 3123 |
| Mva1269I | GAATGC | 1 cut(s) | 802 |
| MvaI | CCWGG | 3 cut(s) | 705, 936, 2015 |
| MvnI | CGCG | 1 cut(s) | 748 |
| NciI | CCSGG | 3 cut(s) | 419, 2362, 2935 |
| NdeI | CATATG | 2 cut(s) | 544, 2337 |
| NlaIV | GGNNCC | 5 cut(s) | 534, 645, 696, 1469, 3401 |
| NmuCI | GTSAC | 5 cut(s) | 1194, 1214, 2060, 2410, 2547 |
| NsiI | ATGCAT | 3 cut(s) | 927, 931, 1272 |
| NspI | RCATGY | 5 cut(s) | 176, 442, 598, 929, 1274 |
| NspV | TTCGAA | 1 cut(s) | 3452 |
| PaeI | GCATGC | 3 cut(s) | 598, 929, 1274 |
| PaeR7I | CTCGAG | 1 cut(s) | 1063 |
| PagI | TCATGA | 2 cut(s) | 631, 787 |
| PciI | ACATGT | 1 cut(s) | 172 |
| PctI | GAATGC | 1 cut(s) | 802 |
| PdmI | GAANNNNTTC | 6 cut(s) | 1585, 1600, 2670, 2683, 2818, 3478 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 130, 2020 |
| PleI | GAGTC | 1 cut(s) | 3500 |
| PmaCI | CACGTG | 1 cut(s) | 3104 |
| PmlI | CACGTG | 1 cut(s) | 3104 |
| PpsI | GAGTC | 1 cut(s) | 3500 |
| Ppu21I | YACGTR | 1 cut(s) | 3104 |
| PpuMI | RGGWCCY | 1 cut(s) | 1467 |
| PscI | ACATGT | 1 cut(s) | 172 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2942 |
| Psp124BI | GAGCTC | 1 cut(s) | 3020 |
| Psp1406I | AACGTT | 1 cut(s) | 3025 |
| Psp5II | RGGWCCY | 1 cut(s) | 1467 |
| Psp6I | CCWGG | 3 cut(s) | 703, 934, 2013 |
| PspCI | CACGTG | 1 cut(s) | 3104 |
| PspGI | CCWGG | 3 cut(s) | 703, 934, 2013 |
| PspN4I | GGNNCC | 5 cut(s) | 534, 645, 696, 1469, 3401 |
| PspPI | GGNCC | 9 cut(s) | 121, 476, 578, 707, 1467, 1877, 2351, 3201, 3400 |
| PspPPI | RGGWCCY | 1 cut(s) | 1467 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3169, 3201 |
| PstI | CTGCAG | 3 cut(s) | 403, 1000, 1057 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1013, 1112 |
| PsuI | RGATCY | 5 cut(s) | 532, 1331, 1438, 1711, 2668 |
| PvuII | CAGCTG | 3 cut(s) | 404, 1010, 1052 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1275 |
| SacI | GAGCTC | 1 cut(s) | 3020 |
| SaqAI | TTAA | 7 cut(s) | 443, 525, 981, 1137, 1934, 2640, 2768 |
| Sau96I | GGNCC | 9 cut(s) | 121, 476, 578, 707, 1467, 1877, 2351, 3201, 3400 |
| SchI | GAGTC | 1 cut(s) | 3500 |
| ScrFI | CCNGG | 6 cut(s) | 419, 705, 936, 2015, 2362, 2935 |
| SduI | GDGCHC | 4 cut(s) | 2273, 2375, 3020, 3443 |
| SfcI | CTRYAG | 5 cut(s) | 399, 996, 1053, 1821, 2889 |
| Sfr274I | CTCGAG | 1 cut(s) | 1063 |
| SfuI | TTCGAA | 1 cut(s) | 3452 |
| SinI | GGWCC | 4 cut(s) | 578, 707, 1467, 3400 |
| SlaI | CTCGAG | 1 cut(s) | 1063 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1275 |
| SmlI | CTYRAG | 6 cut(s) | 738, 1063, 1519, 2298, 2767, 3539 |
| SmoI | CTYRAG | 6 cut(s) | 738, 1063, 1519, 2298, 2767, 3539 |
| SphI | GCATGC | 3 cut(s) | 598, 929, 1274 |
| SsiI | CCGC | 5 cut(s) | 24, 358, 436, 746, 990 |
| SspI | AATATT | 3 cut(s) | 312, 1073, 1309 |
| SstI | GAGCTC | 1 cut(s) | 3020 |
| StyD4I | CCNGG | 6 cut(s) | 417, 703, 934, 2013, 2360, 2933 |
| StyI | CCWWGG | 4 cut(s) | 1715, 2121, 2605, 2795 |
| TaaI | ACNGT | 9 cut(s) | 1220, 1248, 1825, 1892, 2030, 2143, 2153, 2547, 2779 |
| TaiI | ACGT | 5 cut(s) | 339, 1774, 1913, 3028, 3106 |
| TaqI | TCGA | 6 cut(s) | 59, 216, 1064, 1725, 2086, 3452 |
| TaqII | GACCGA | 1 cut(s) | 2494 |
| TatI | WGTACW | 4 cut(s) | 144, 1955, 1996, 2490 |
| TauI | GCSGC | 2 cut(s) | 438, 992 |
| Tru1I | TTAA | 7 cut(s) | 443, 525, 981, 1137, 1934, 2640, 2768 |
| Tru9I | TTAA | 7 cut(s) | 443, 525, 981, 1137, 1934, 2640, 2768 |
| TscAI | CASTG | 9 cut(s) | 1788, 1897, 2148, 2158, 2278, 2848, 2986, 3448, 3474 |
| TseFI | GTSAC | 5 cut(s) | 1194, 1214, 2060, 2410, 2547 |
| Tsp45I | GTSAC | 5 cut(s) | 1194, 1214, 2060, 2410, 2547 |
| TspGWI | ACGGA | 3 cut(s) | 591, 2272, 2826 |
| TspRI | CASTG | 9 cut(s) | 1788, 1897, 2148, 2158, 2278, 2848, 2986, 3448, 3474 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 130, 2020 |
| Vha464I | CTTAAG | 1 cut(s) | 2767 |
| VpaK11BI | GGWCC | 4 cut(s) | 578, 707, 1467, 3400 |
| XapI | RAATTY | 3 cut(s) | 1936, 2260, 2746 |
| XbaI | TCTAGA | 2 cut(s) | 604, 2720 |
| XceI | RCATGY | 5 cut(s) | 176, 442, 598, 929, 1274 |
| XhoI | CTCGAG | 1 cut(s) | 1063 |
| XmiI | GTMKAC | 2 cut(s) | 458, 3049 |
| XmnI | GAANNNNTTC | 6 cut(s) | 1585, 1600, 2670, 2683, 2818, 3478 |
| Zsp2I | ATGCAT | 3 cut(s) | 927, 931, 1272 |