Regulator of Vps4 activity in the MVB pathway
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g06910 FvH4_1g06910 FvH4_1g06910 |
| malus_domestica | MD02G1073500.v1.1 MD15G1202900.v1.1 |
| prunus_persica | Prupe.7G214200_v2.0.a1 Prupe.7G214200_v2.0.a1 |
| pyrus_communis | pycom02g05790 pycom15g18020 |
| rosa_chinensis | RchiOBHm_Chr2g0092801 RchiOBHm_Chr2g0092861 |
| rosa_laevigata | RLG00000016336 |
| rosa_multiflora | Rmu_sc0003262.1_g000014 |
| rosa_roxburghii | Rroxscaffold_2G00148810 |
| rosa_rugosa | Rorug02G0029300 Rorug02G0029400 |
| rosa_samantha | Rh2AG075200 Rh2CG078300 Rh2CG078800 Rh2DG073200 Rh2DG073600 Rh2DG073800 |
| rosa_wichuraiana | Rw2G007080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 4 cut(s) | 3424, 3778, 3955, 4123 |
| Acc36I | ACCTGC | 1 cut(s) | 585 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 425 |
| AccBSI | CCGCTC | 1 cut(s) | 4045 |
| AccI | GTMKAC | 2 cut(s) | 2322, 4309 |
| AccII | CGCG | 1 cut(s) | 634 |
| AccIII | TCCGGA | 1 cut(s) | 568 |
| AciI | CCGC | 7 cut(s) | 53, 632, 804, 884, 2737, 3360, 4045 |
| AclWI | GGATC | 8 cut(s) | 527, 540, 1091, 1288, 1438, 1588, 2410, 3049 |
| AcoI | YGGCCR | 2 cut(s) | 139, 606 |
| AcyI | GRCGYC | 1 cut(s) | 1453 |
| AfaI | GTAC | 8 cut(s) | 1189, 1339, 1489, 1639, 2157, 2490, 3474, 3651 |
| AfeI | AGCGCT | 1 cut(s) | 3332 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 425, 635, 1921, 2579, 3447, 3801, 3850 |
| AflIII | ACRYGT | 1 cut(s) | 172 |
| AhlI | ACTAGT | 1 cut(s) | 302 |
| AjnI | CCWGG | 7 cut(s) | 141, 1862, 1914, 2768, 3511, 3688, 3865 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3730, 3762 |
| AleI | CACNNNNGTG | 1 cut(s) | 1214 |
| Alw21I | GWGCWC | 9 cut(s) | 1961, 2135, 2348, 2912, 3326, 3503, 3680, 4184, 4225 |
| Alw44I | GTGCAC | 1 cut(s) | 4221 |
| AlwI | GGATC | 8 cut(s) | 527, 540, 1091, 1288, 1438, 1588, 2410, 3049 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 965, 2237, 3377, 3647 |
| Ama87I | CYCGRG | 1 cut(s) | 2577 |
| Aor13HI | TCCGGA | 1 cut(s) | 568 |
| Aor51HI | AGCGCT | 1 cut(s) | 3332 |
| ApaLI | GTGCAC | 1 cut(s) | 4221 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 895, 3114 |
| AspLEI | GCGC | 4 cut(s) | 417, 955, 3333, 4029 |
| AsuC2I | CCSGG | 1 cut(s) | 764 |
| AvaI | CYCGRG | 1 cut(s) | 2577 |
| AvaII | GGWCC | 8 cut(s) | 574, 587, 3402, 3579, 3756, 3933, 4098, 4205 |
| AxyI | CCTNAGG | 1 cut(s) | 179 |
| BaeGI | GKGCMC | 1 cut(s) | 4225 |
| BalI | TGGCCA | 1 cut(s) | 141 |
| BamHI | GGATCC | 1 cut(s) | 532 |
| BanII | GRGCYC | 5 cut(s) | 2135, 3326, 3503, 3680, 3857 |
| BbsI | GAAGAC | 1 cut(s) | 197 |
| Bbv12I | GWGCWC | 9 cut(s) | 1961, 2135, 2348, 2912, 3326, 3503, 3680, 4184, 4225 |
| BccI | CCATC | 6 cut(s) | 848, 2285, 2581, 2785, 2870, 3844 |
| BceAI | ACGGC | 2 cut(s) | 490, 2361 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 218, 252, 4253, 4287 |
| BciT130I | CCWGG | 7 cut(s) | 143, 1864, 1916, 2770, 3513, 3690, 3867 |
| BciVI | GTATCC | 2 cut(s) | 727, 2809 |
| BclI | TGATCA | 4 cut(s) | 1552, 1789, 1816, 1891 |
| BcnI | CCSGG | 1 cut(s) | 764 |
| BcuI | ACTAGT | 1 cut(s) | 302 |
| BfoI | RGCGCY | 1 cut(s) | 3334 |
| BfuAI | ACCTGC | 1 cut(s) | 585 |
| BfuI | GTATCC | 2 cut(s) | 727, 2809 |
| BglII | AGATCT | 4 cut(s) | 746, 833, 1730, 3112 |
| BmcAI | AGTACT | 1 cut(s) | 1339 |
| Bme1390I | CCNGG | 8 cut(s) | 143, 764, 1864, 1916, 2770, 3513, 3690, 3867 |
| Bme18I | GGWCC | 8 cut(s) | 574, 587, 3402, 3579, 3756, 3933, 4098, 4205 |
| BmeT110I | CYCGRG | 1 cut(s) | 2577 |
| BmiI | GGNNCC | 5 cut(s) | 534, 627, 669, 687, 2933 |
| BmrFI | CCNGG | 8 cut(s) | 143, 764, 1864, 1916, 2770, 3513, 3690, 3867 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2392 |
| BpiI | GAAGAC | 1 cut(s) | 197 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 380, 412, 3745, 3777 |
| BpmI | CTGGAG | 2 cut(s) | 420, 1869 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3334 |
| BpuEI | CTTGAG | 1 cut(s) | 152 |
| BpuMI | CCSGG | 1 cut(s) | 764 |
| Bsa29I | ATCGAT | 1 cut(s) | 1129 |
| BsaAI | YACGTR | 1 cut(s) | 1897 |
| BsaBI | GATNNNNATC | 3 cut(s) | 491, 1131, 2407 |
| BsaHI | GRCGYC | 1 cut(s) | 1453 |
| BsaI | GGTCTC | 1 cut(s) | 1872 |
| BsaJI | CCNNGG | 9 cut(s) | 1915, 2506, 2529, 3511, 3688, 3849, 3865, 4030, 4133 |
| BsaWI | WCCGGW | 1 cut(s) | 568 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 2525, 2555, 3422, 3452, 4174, 4204 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 425, 635, 1921, 2579, 3447, 3801, 3850 |
| Bse118I | RCCGGY | 1 cut(s) | 3535 |
| Bse21I | CCTNAGG | 1 cut(s) | 179 |
| Bse3DI | GCAATG | 1 cut(s) | 3145 |
| Bse8I | GATNNNNATC | 3 cut(s) | 491, 1131, 2407 |
| BseAI | TCCGGA | 1 cut(s) | 568 |
| BseBI | CCWGG | 7 cut(s) | 143, 1864, 1916, 2770, 3513, 3690, 3867 |
| BseCI | ATCGAT | 1 cut(s) | 1129 |
| BseDI | CCNNGG | 9 cut(s) | 1915, 2506, 2529, 3511, 3688, 3849, 3865, 4030, 4133 |
| BseGI | GGATG | 9 cut(s) | 358, 820, 943, 1804, 2755, 2989, 3308, 3839, 4145 |
| BseJI | GATNNNNATC | 3 cut(s) | 491, 1131, 2407 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 425, 635, 1921, 2579, 3447, 3801, 3850 |
| BseMI | GCAATG | 1 cut(s) | 3145 |
| BseMII | CTCAG | 9 cut(s) | 193, 1149, 2487, 2802, 3339, 3348, 3516, 3693, 3870 |
| BseRI | GAGGAG | 3 cut(s) | 2330, 2432, 3430 |
| BseSI | GKGCMC | 1 cut(s) | 4225 |
| BsgI | GTGCAG | 2 cut(s) | 351, 2352 |
| Bsh1236I | CGCG | 1 cut(s) | 634 |
| BshVI | ATCGAT | 1 cut(s) | 1129 |
| BsiHKAI | GWGCWC | 9 cut(s) | 1961, 2135, 2348, 2912, 3326, 3503, 3680, 4184, 4225 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2577 |
| BsiSI | CCGG | 4 cut(s) | 569, 763, 3536, 4300 |
| BslFI | GGGAC | 6 cut(s) | 871, 1440, 2731, 3472, 3649, 3991 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 425, 635, 1921, 2579, 3447, 3801, 3850 |
| BsmFI | GGGAC | 6 cut(s) | 871, 1440, 2731, 3472, 3649, 3991 |
| BsmI | GAATGC | 2 cut(s) | 871, 1303 |
| Bso31I | GGTCTC | 1 cut(s) | 1872 |
| BsoBI | CYCGRG | 1 cut(s) | 2577 |
| Bsp13I | TCCGGA | 1 cut(s) | 568 |
| Bsp1407I | TGTACA | 1 cut(s) | 2488 |
| BspACI | CCGC | 7 cut(s) | 53, 632, 804, 884, 2737, 3360, 4045 |
| BspCNI | CTCAG | 9 cut(s) | 192, 1150, 2488, 2803, 3338, 3347, 3515, 3692, 3869 |
| BspDI | ATCGAT | 1 cut(s) | 1129 |
| BspEI | TCCGGA | 1 cut(s) | 568 |
| BspFNI | CGCG | 1 cut(s) | 634 |
| BspHI | TCATGA | 2 cut(s) | 655, 709 |
| BspLI | GGNNCC | 5 cut(s) | 534, 627, 669, 687, 2933 |
| BspMAI | CTGCAG | 2 cut(s) | 952, 1009 |
| BspMI | ACCTGC | 1 cut(s) | 585 |
| BspPI | GGATC | 8 cut(s) | 527, 540, 1091, 1288, 1438, 1588, 2410, 3049 |
| BspTNI | GGTCTC | 1 cut(s) | 1872 |
| BsrBI | CCGCTC | 1 cut(s) | 4045 |
| BsrDI | GCAATG | 1 cut(s) | 3145 |
| BsrFI | RCCGGY | 1 cut(s) | 3535 |
| BsrGI | TGTACA | 1 cut(s) | 2488 |
| BssAI | RCCGGY | 1 cut(s) | 3535 |
| BssECI | CCNNGG | 9 cut(s) | 1915, 2506, 2529, 3511, 3688, 3849, 3865, 4030, 4133 |
| BssNI | GRCGYC | 1 cut(s) | 1453 |
| BssT1I | CCWWGG | 4 cut(s) | 2506, 3849, 4030, 4133 |
| Bst2UI | CCWGG | 7 cut(s) | 143, 1864, 1916, 2770, 3513, 3690, 3867 |
| BstACI | GRCGYC | 1 cut(s) | 1453 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 4280 |
| BstAUI | TGTACA | 1 cut(s) | 2488 |
| BstBAI | YACGTR | 1 cut(s) | 1897 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 1919, 3445, 3799 |
| BstF5I | GGATG | 9 cut(s) | 358, 820, 943, 1804, 2755, 2989, 3308, 3839, 4145 |
| BstFNI | CGCG | 1 cut(s) | 634 |
| BstH2I | RGCGCY | 1 cut(s) | 3334 |
| BstHHI | GCGC | 4 cut(s) | 417, 955, 3333, 4029 |
| BstNI | CCWGG | 7 cut(s) | 143, 1864, 1916, 2770, 3513, 3690, 3867 |
| BstNSI | RCATGY | 2 cut(s) | 176, 4112 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2392 |
| BstSCI | CCNGG | 8 cut(s) | 141, 762, 1862, 1914, 2768, 3511, 3688, 3865 |
| BstSLI | GKGCMC | 1 cut(s) | 4225 |
| BstUI | CGCG | 1 cut(s) | 634 |
| BstV2I | GAAGAC | 1 cut(s) | 197 |
| BstX2I | RGATCY | 7 cut(s) | 532, 746, 833, 1730, 2402, 3041, 3112 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1915, 4291 |
| BstYI | RGATCY | 7 cut(s) | 532, 746, 833, 1730, 2402, 3041, 3112 |
| Bsu15I | ATCGAT | 1 cut(s) | 1129 |
| Bsu36I | CCTNAGG | 1 cut(s) | 179 |
| BsuI | GTATCC | 2 cut(s) | 727, 2809 |
| BsuTUI | ATCGAT | 1 cut(s) | 1129 |
| BtsCI | GGATG | 9 cut(s) | 358, 820, 943, 1804, 2755, 2989, 3308, 3839, 4145 |
| BtsI | GCAGTG | 3 cut(s) | 369, 2523, 3016 |
| BveI | ACCTGC | 1 cut(s) | 585 |
| CaiI | CAGNNNCTG | 4 cut(s) | 965, 2237, 3377, 3647 |
| CciI | TCATGA | 2 cut(s) | 655, 709 |
| CfoI | GCGC | 4 cut(s) | 417, 955, 3333, 4029 |
| Cfr10I | RCCGGY | 1 cut(s) | 3535 |
| ClaI | ATCGAT | 1 cut(s) | 1129 |
| CseI | GACGC | 2 cut(s) | 1442, 2203 |
| Csp6I | GTAC | 8 cut(s) | 1188, 1338, 1488, 1638, 2156, 2489, 3473, 3650 |
| CviQI | GTAC | 8 cut(s) | 1188, 1338, 1488, 1638, 2156, 2489, 3473, 3650 |
| DraI | TTTAAA | 1 cut(s) | 2121 |
| DrdI | GACNNNNNNGTC | 4 cut(s) | 3424, 3778, 3955, 4123 |
| DseDI | GACNNNNNNGTC | 4 cut(s) | 3424, 3778, 3955, 4123 |
| EaeI | YGGCCR | 2 cut(s) | 139, 606 |
| Ecl136II | GAGCTC | 4 cut(s) | 2133, 3324, 3501, 3678 |
| Eco130I | CCWWGG | 4 cut(s) | 2506, 3849, 4030, 4133 |
| Eco147I | AGGCCT | 1 cut(s) | 1753 |
| Eco24I | GRGCYC | 5 cut(s) | 2135, 3326, 3503, 3680, 3857 |
| Eco31I | GGTCTC | 1 cut(s) | 1872 |
| Eco32I | GATATC | 1 cut(s) | 1133 |
| Eco47I | GGWCC | 8 cut(s) | 574, 587, 3402, 3579, 3756, 3933, 4098, 4205 |
| Eco47III | AGCGCT | 1 cut(s) | 3332 |
| Eco53kI | GAGCTC | 4 cut(s) | 2133, 3324, 3501, 3678 |
| Eco81I | CCTNAGG | 1 cut(s) | 179 |
| Eco88I | CYCGRG | 1 cut(s) | 2577 |
| EcoICRI | GAGCTC | 4 cut(s) | 2133, 3324, 3501, 3678 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 1919, 3445, 3799 |
| EcoO109I | RGGNCCY | 8 cut(s) | 574, 3402, 3579, 3756, 3933, 3999, 4098, 4205 |
| EcoRI | GAATTC | 2 cut(s) | 159, 1972 |
| EcoRII | CCWGG | 7 cut(s) | 141, 1862, 1914, 2768, 3511, 3688, 3865 |
| EcoRV | GATATC | 1 cut(s) | 1133 |
| EcoT14I | CCWWGG | 4 cut(s) | 2506, 3849, 4030, 4133 |
| EcoT38I | GRGCYC | 5 cut(s) | 2135, 3326, 3503, 3680, 3857 |
| ErhI | CCWWGG | 4 cut(s) | 2506, 3849, 4030, 4133 |
| FaqI | GGGAC | 6 cut(s) | 871, 1440, 2731, 3472, 3649, 3991 |
| FauI | CCCGC | 1 cut(s) | 3367 |
| FauNDI | CATATG | 2 cut(s) | 205, 3607 |
| FbaI | TGATCA | 4 cut(s) | 1552, 1789, 1816, 1891 |
| FblI | GTMKAC | 2 cut(s) | 2322, 4309 |
| FokI | GGATG | 9 cut(s) | 365, 807, 950, 1811, 2742, 2996, 3295, 3826, 4132 |
| FriOI | GRGCYC | 5 cut(s) | 2135, 3326, 3503, 3680, 3857 |
| GlaI | GCGC | 4 cut(s) | 416, 954, 3332, 4028 |
| GsuI | CTGGAG | 2 cut(s) | 420, 1869 |
| HaeII | RGCGCY | 1 cut(s) | 3334 |
| HapII | CCGG | 4 cut(s) | 569, 763, 3536, 4300 |
| HgaI | GACGC | 2 cut(s) | 1442, 2203 |
| HhaI | GCGC | 4 cut(s) | 417, 955, 3333, 4029 |
| Hin1I | GRCGYC | 1 cut(s) | 1453 |
| Hin6I | GCGC | 4 cut(s) | 415, 953, 3331, 4027 |
| HinP1I | GCGC | 4 cut(s) | 415, 953, 3331, 4027 |
| HincII | GTYRAC | 1 cut(s) | 4310 |
| HindII | GTYRAC | 1 cut(s) | 4310 |
| HindIII | AAGCTT | 4 cut(s) | 47, 2333, 4236, 4256 |
| HpaII | CCGG | 4 cut(s) | 569, 763, 3536, 4300 |
| Hpy166II | GTNNAC | 6 cut(s) | 2169, 2323, 2766, 4223, 4249, 4310 |
| Hpy8I | GTNNAC | 6 cut(s) | 2169, 2323, 2766, 4223, 4249, 4310 |
| Hpy99I | CGWCG | 1 cut(s) | 43 |
| HpyCH4IV | ACGT | 4 cut(s) | 38, 522, 1165, 1896 |
| HpySE526I | ACGT | 4 cut(s) | 38, 522, 1165, 1896 |
| Hsp92I | GRCGYC | 1 cut(s) | 1453 |
| HspAI | GCGC | 4 cut(s) | 415, 953, 3331, 4027 |
| Kpn2I | TCCGGA | 1 cut(s) | 568 |
| Ksp22I | TGATCA | 4 cut(s) | 1552, 1789, 1816, 1891 |
| MaeII | ACGT | 4 cut(s) | 38, 522, 1165, 1896 |
| MaeIII | GTNAC | 6 cut(s) | 261, 1112, 1166, 2451, 2806, 2991 |
| MbiI | CCGCTC | 1 cut(s) | 4045 |
| MfeI | CAATTG | 2 cut(s) | 504, 3915 |
| MflI | RGATCY | 7 cut(s) | 532, 746, 833, 1730, 2402, 3041, 3112 |
| MlsI | TGGCCA | 1 cut(s) | 141 |
| MluNI | TGGCCA | 1 cut(s) | 141 |
| MlyI | GAGTC | 8 cut(s) | 269, 566, 1163, 2000, 2597, 3349, 4259, 4315 |
| MmeI | TCCRAC | 1 cut(s) | 816 |
| Mox20I | TGGCCA | 1 cut(s) | 141 |
| MroI | TCCGGA | 1 cut(s) | 568 |
| MroXI | GAANNNNTTC | 2 cut(s) | 895, 3114 |
| MscI | TGGCCA | 1 cut(s) | 141 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1214, 1364, 1514, 1664, 1899, 2121 |
| Msp20I | TGGCCA | 1 cut(s) | 141 |
| MspA1I | CMGCKG | 2 cut(s) | 962, 1004 |
| MspI | CCGG | 4 cut(s) | 569, 763, 3536, 4300 |
| MspR9I | CCNGG | 8 cut(s) | 143, 764, 1864, 1916, 2770, 3513, 3690, 3867 |
| MunI | CAATTG | 2 cut(s) | 504, 3915 |
| Mva1269I | GAATGC | 2 cut(s) | 871, 1303 |
| MvaI | CCWGG | 7 cut(s) | 143, 1864, 1916, 2770, 3513, 3690, 3867 |
| MvnI | CGCG | 1 cut(s) | 634 |
| NciI | CCSGG | 1 cut(s) | 764 |
| NdeI | CATATG | 2 cut(s) | 205, 3607 |
| NlaIV | GGNNCC | 5 cut(s) | 534, 627, 669, 687, 2933 |
| NmeAIII | GCCGAG | 1 cut(s) | 584 |
| NmuCI | GTSAC | 5 cut(s) | 261, 1112, 1166, 2806, 2991 |
| NspI | RCATGY | 2 cut(s) | 176, 4112 |
| OliI | CACNNNNGTG | 1 cut(s) | 1214 |
| PaeR7I | CTCGAG | 1 cut(s) | 2577 |
| PagI | TCATGA | 2 cut(s) | 655, 709 |
| PceI | AGGCCT | 1 cut(s) | 1753 |
| PciI | ACATGT | 1 cut(s) | 172 |
| PctI | GAATGC | 2 cut(s) | 871, 1303 |
| PdmI | GAANNNNTTC | 2 cut(s) | 895, 3114 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 425 |
| PfoI | TCCNGGA | 1 cut(s) | 762 |
| PleI | GAGTC | 8 cut(s) | 268, 565, 1163, 2000, 2597, 3348, 4259, 4314 |
| PpsI | GAGTC | 8 cut(s) | 268, 565, 1163, 2000, 2597, 3348, 4259, 4314 |
| Ppu21I | YACGTR | 1 cut(s) | 1897 |
| PpuMI | RGGWCCY | 7 cut(s) | 574, 3402, 3579, 3756, 3933, 4098, 4205 |
| PscI | ACATGT | 1 cut(s) | 172 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2392 |
| Psp124BI | GAGCTC | 4 cut(s) | 2135, 3326, 3503, 3680 |
| Psp5II | RGGWCCY | 7 cut(s) | 574, 3402, 3579, 3756, 3933, 4098, 4205 |
| Psp6I | CCWGG | 7 cut(s) | 141, 1862, 1914, 2768, 3511, 3688, 3865 |
| PspGI | CCWGG | 7 cut(s) | 141, 1862, 1914, 2768, 3511, 3688, 3865 |
| PspN4I | GGNNCC | 5 cut(s) | 534, 627, 669, 687, 2933 |
| PspPPI | RGGWCCY | 7 cut(s) | 574, 3402, 3579, 3756, 3933, 4098, 4205 |
| PstI | CTGCAG | 2 cut(s) | 952, 1009 |
| PstNI | CAGNNNCTG | 4 cut(s) | 965, 2237, 3377, 3647 |
| PsuI | RGATCY | 7 cut(s) | 532, 746, 833, 1730, 2402, 3041, 3112 |
| PvuII | CAGCTG | 2 cut(s) | 962, 1004 |
| RsaI | GTAC | 8 cut(s) | 1189, 1339, 1489, 1639, 2157, 2490, 3474, 3651 |
| RsaNI | GTAC | 8 cut(s) | 1188, 1338, 1488, 1638, 2156, 2489, 3473, 3650 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1214, 1364, 1514, 1664, 1899, 2121 |
| SacI | GAGCTC | 4 cut(s) | 2135, 3326, 3503, 3680 |
| SalI | GTCGAC | 1 cut(s) | 4308 |
| ScaI | AGTACT | 1 cut(s) | 1339 |
| SchI | GAGTC | 8 cut(s) | 269, 566, 1163, 2000, 2597, 3349, 4259, 4315 |
| ScrFI | CCNGG | 8 cut(s) | 143, 764, 1864, 1916, 2770, 3513, 3690, 3867 |
| Sfr274I | CTCGAG | 1 cut(s) | 2577 |
| SinI | GGWCC | 8 cut(s) | 574, 587, 3402, 3579, 3756, 3933, 4098, 4205 |
| SlaI | CTCGAG | 1 cut(s) | 2577 |
| SmiI | ATTTAAAT | 1 cut(s) | 2121 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1214, 1364, 1514, 1664, 1899, 2121 |
| SmlI | CTYRAG | 2 cut(s) | 131, 2577 |
| SmoI | CTYRAG | 2 cut(s) | 131, 2577 |
| SpeI | ACTAGT | 1 cut(s) | 302 |
| SseBI | AGGCCT | 1 cut(s) | 1753 |
| SsiI | CCGC | 7 cut(s) | 53, 632, 804, 884, 2737, 3360, 4045 |
| SspI | AATATT | 1 cut(s) | 1708 |
| SstI | GAGCTC | 4 cut(s) | 2135, 3326, 3503, 3680 |
| StuI | AGGCCT | 1 cut(s) | 1753 |
| StyD4I | CCNGG | 8 cut(s) | 141, 762, 1862, 1914, 2768, 3511, 3688, 3865 |
| StyI | CCWWGG | 4 cut(s) | 2506, 3849, 4030, 4133 |
| SwaI | ATTTAAAT | 1 cut(s) | 2121 |
| TaiI | ACGT | 4 cut(s) | 41, 525, 1168, 1899 |
| TaqI | TCGA | 5 cut(s) | 258, 1129, 2578, 3787, 4309 |
| TatI | WGTACW | 4 cut(s) | 1187, 1337, 2155, 2488 |
| TauI | GCSGC | 1 cut(s) | 4048 |
| TseFI | GTSAC | 5 cut(s) | 261, 1112, 1166, 2806, 2991 |
| Tsp45I | GTSAC | 5 cut(s) | 261, 1112, 1166, 2806, 2991 |
| TspGWI | ACGGA | 7 cut(s) | 163, 875, 903, 2470, 2944, 3978, 4192 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 425 |
| VneI | GTGCAC | 1 cut(s) | 4221 |
| VpaK11BI | GGWCC | 8 cut(s) | 574, 587, 3402, 3579, 3756, 3933, 4098, 4205 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 1919, 3445, 3799 |
| XbaI | TCTAGA | 1 cut(s) | 3164 |
| XceI | RCATGY | 2 cut(s) | 176, 4112 |
| XhoI | CTCGAG | 1 cut(s) | 2577 |
| XmiI | GTMKAC | 2 cut(s) | 2322, 4309 |
| XmnI | GAANNNNTTC | 2 cut(s) | 895, 3114 |
| ZrmI | AGTACT | 1 cut(s) | 1339 |